F282695

General Info

Members Datasets Scaffolds Average Seq Length
184 139 368 819

Family's Representative Sequence

Representative Sequence 3300025933|Ga0207706_10004243|Ga0207706_100042439
Length 906
Sequence VRETRPIVSMRAPSAPLPLSSYALRARNSMERLIVHRTPRGSLVACVTAACSLLLITAPLAVPAQAASGPVVDPAIARSPELSETSRLSDRRFVVTGDRAWALGAADGSYPAAGFHTRGEMGGFWLPNLKLLDGMWFNINGDWIKGATKTTSGWGYVRADLPTTNGVSASRTDFVPRGVSGALVGLTLRSDNNRTITLRADAHSELISSYPWGETKPSQTLVNLADSVSVRGKQLLFRDKGTPKSPNFSSHDWAAAFGSDLSPYATKTGKDFRGPQDPAVICPASGPTAPPQPKRCDDTEYGKGAGGQLAYKIKLKAGAVKTVWFGVGGSTAGPAQARAELRKALGNPEAAIRKVVGYRERVNTLSDVSLPGNPLVTRSVAWSKQMLAASEQRVDDLQLRAVNAGQAYPPPAGTLKSMRWLGAGWPDYTWLFGTDGEYTAFASVAAGQFGPIKDHLRALRDVSEIVNKGSGKIVHEVTPDGAVFFGANADAGNTDESSKYPSAVALIWRWTGDKRFLKDLYPASVKAMKYVATLDEDGDGWPEGLGNVERAGMGEEKLDNAVYTIRGYADLADLAKAVGDVKTKRWATKKAKALLDKFENDWWYPTDGANSYADSLDDPGNKKVFQRHWIGLTPTDAVLPKLPGRPSAPLASDEHANTTLDQHERPCFTNELGLYHTGTGPTSATGGNPGPSCDSVISEVPSERNIFTLNSAIAGVSEGNYGRLGDKQQGVYVNGNAKSQLDTRLWEMPGAMPEIVPGGDFGANIDRLFTERSMVMQAWGAYGVLWPVIHQWLGVSPELGRDRVAVVPQLPAGQSKASANEVKLGALAIDVAAEHQGSTFTTEVTRHGSIDVRIGAVLPDGAKVASATLNGSPAKLKLVKTTRGLEAVTKAKPGQRTSTLVITVAP

Samples

Sample ID Description Type Environment
1 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
51 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
52 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
53 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
54 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
55 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
56 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
57 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
58 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
59 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
60 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
61 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
62 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
63 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
64 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
65 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
66 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
67 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
68 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
71 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
75 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
83 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
84 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
85 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
92 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
95 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
96 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
97 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
98 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
99 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
100 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
101 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
137 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
138 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
139 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.28
Metatranscriptomes 1.09
Isolates 1.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.54
Nodule 0
Rhizoplane 5.43
Rhizosphere 89.13
Stem 0
Stem Tuber 0
Unclassified 1.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207706_10004243 3300025933 Bacteria 13499
2 JGI25406J46586_10006197 3300003203 Bacteria 5523
3 JGI25406J46586_10006429 3300003203 Bacteria 5408
4 rootL2_10037214 3300003322 Bacteria 4584
5 Ga0070683_100018002 3300005329 Bacteria 6248
6 Ga0070680_100056402 3300005336 Bacteria 3211
7 Ga0070682_100016414 3300005337 Bacteria 4304
8 Ga0068868_100013080 3300005338 Bacteria 6076
9 Ga0070660_100035125 3300005339 Bacteria 3793
10 Ga0070689_100064954 3300005340 Bacteria 2841
11 Ga0070668_100000541 3300005347 Bacteria 25227
12 Ga0070668_100074004 3300005347 Bacteria 2657
13 Ga0070675_100001390 3300005354 Bacteria 17761
14 Ga0070659_100002996 3300005366 Bacteria 12018
15 Ga0070708_100059688 3300005445 Bacteria 3401
16 Ga0070706_100000187 3300005467 Bacteria 78411
17 Ga0070672_100044436 3300005543 Bacteria 3431
18 Ga0070664_100023691 3300005564 Bacteria 5071
19 Ga0068864_100059220 3300005618 Bacteria 3313
20 Ga0068858_100022555 3300005842 Bacteria 5874
21 Ga0068860_100035475 3300005843 Bacteria 4784
22 Ga0068860_100076854 3300005843 Bacteria 3175
23 Ga0081455_10000117 3300005937 Bacteria 91308
24 Ga0081455_10000613 3300005937 Bacteria 46197
25 Ga0081455_10003660 3300005937 Bacteria 17615
26 Ga0081455_10004754 3300005937 Bacteria 15095
27 Ga0081455_10032162 3300005937 Bacteria 4732
28 Ga0081538_10001937 3300005981 Bacteria 20709
29 Ga0081538_10007855 3300005981 Bacteria 9149
30 Ga0081540_1000372 3300005983 Bacteria 44934
31 Ga0081539_10000573 3300005985 Bacteria 76094
32 Ga0081539_10001275 3300005985 Bacteria 44368
33 Ga0081539_10001722 3300005985 Bacteria 34982
34 Ga0081539_10001798 3300005985 Bacteria 33956
35 Ga0081539_10003872 3300005985 Bacteria 17503
36 Ga0081539_10008130 3300005985 Bacteria 9259
37 Ga0070717_10003458 3300006028 Bacteria 11304
38 Ga0070717_10040902 3300006028 Unclassified 3778
39 Ga0075428_100001005 3300006844 Bacteria 29881
40 Ga0075430_100027480 3300006846 Bacteria 4833
41 Ga0075431_100000497 3300006847 Bacteria 32744
42 Ga0075431_100003085 3300006847 Bacteria 16143
43 Ga0075429_100035356 3300006880 Bacteria 4345
44 Ga0068865_100009155 3300006881 Bacteria 6128
45 Ga0111539_10006723 3300009094 Bacteria 14798
46 Ga0105243_10006027 3300009148 Bacteria 9385
47 Ga0105239_10103193 3300010375 Bacteria 3156
48 Ga0157369_10005200 3300013105 Bacteria 15206
49 Ga0157372_10005278 3300013307 Bacteria 13712
50 Ga0206356_10487880 3300020070 Bacteria 2964
51 Ga0206356_11219129 3300020070 Bacteria 3230
52 Ga0213875_10000618 3300021388 Bacteria 28489
53 Ga0207642_10006479 3300025899 Bacteria 3895
54 Ga0207688_10011694 3300025901 Bacteria 4774
55 Ga0207684_10002260 3300025910 Bacteria 19618
56 Ga0207657_10035953 3300025919 Bacteria 4436
57 Ga0207646_10012942 3300025922 Bacteria 7997
58 Ga0207646_10014346 3300025922 Bacteria 7529
59 Ga0207659_10029194 3300025926 Bacteria 3756
60 Ga0207690_10004592 3300025932 Bacteria 8162
61 Ga0207706_10017801 3300025933 Bacteria 6401
62 Ga0207689_10011599 3300025942 Bacteria 7550
63 Ga0207661_10057567 3300025944 Bacteria 3126
64 Ga0207677_10003706 3300026023 Bacteria 8106
65 Ga0207703_10023064 3300026035 Bacteria 4887
66 Ga0207675_100013356 3300026118 Bacteria 7663
67 Ga0207675_100025511 3300026118 Bacteria 5501
68 Ga0207675_100035205 3300026118 Bacteria 4670
69 Ga0207683_10022666 3300026121 Bacteria 5393
70 Ga0307515_10059059 3300028794 Bacteria 5506
71 Ga0307512_10003293 3300030522 Bacteria 19005
72 Ga0307509_10021270 3300031507 Bacteria 7339
73 Ga0307516_10002204 3300031730 Bacteria 26381
74 Ga0307415_100028674 3300032126 Bacteria 3545
75 Ga0373934_0005285 3300035086 Bacteria 4776
76 Ga0373923_0002940 3300035111 Bacteria 5363
77 Ga0373936_0003067 3300035113 Bacteria 6250
78 Ga0373945_0002791 3300035116 Bacteria 5478
79 Ga0373953_0001033 3300035117 Bacteria 7878
80 Ga0373953_0004311 3300035117 Bacteria 4524
81 Ga0373954_0007000 3300035118 Bacteria 4921
82 Ga0373956_0001894 3300035119 Bacteria 8621
83 Ga0373957_0002971 3300035120 Bacteria 4919
84 Ga0373943_0002458 3300035170 Bacteria 8421
85 Ga0373946_0004683 3300035171 Bacteria 4912
86 Ga0373955_0003491 3300035172 Bacteria 6912
87 Ga0373935_0034434 3300035692 Bacteria 3156
88 Ga0373933_0006951 3300035724 Bacteria 6167
89 Ga0373947_0031343 3300035725 Bacteria 3128
90 Ga0373937_0034512 3300036401 Bacteria 4601
91 Ga0395898_0041658 3300037466 Bacteria 4535
92 Ga0436364_0242713 3300037853 Bacteria 3349
93 Ga0436364_0406183 3300037853 Bacteria 5005
94 Ga0436364_0436299 3300037853 Bacteria 23213
95 Ga0395901_0018719 3300038443 Bacteria 7075
96 Ga0466967_0088657 3300045976 Unclassified 2808
97 Ga0495592_0022512 3300046454 Bacteria 4794
98 Ga0495603_0004803 3300046455 Bacteria 8078
99 Ga0495629_0016960 3300046459 Bacteria 5225
100 Ga0495629_0042759 3300046459 Bacteria 3183
101 Ga0495641_0005359 3300046461 Bacteria 8694
102 Ga0495651_0026413 3300046462 Bacteria 4522
103 Ga0495653_0027815 3300046463 Bacteria 4525
104 Ga0495580_0017772 3300046472 Bacteria 5306
105 Ga0495639_0002619 3300046475 Bacteria 7829
106 Ga0495662_0000950 3300046476 Bacteria 14190
107 Ga0495662_0024824 3300046476 Bacteria 2893
108 Ga0495664_0001263 3300046477 Bacteria 13257
109 Ga0495608_0016563 3300046511 Bacteria 5101
110 Ga0495618_0005491 3300046514 Bacteria 7719
111 Ga0495618_0008538 3300046514 Bacteria 6189
112 Ga0495628_0027851 3300046516 Bacteria 4593
113 Ga0495630_0002673 3300046517 Bacteria 12355
114 Ga0495630_0009643 3300046517 Bacteria 6944
115 Ga0495652_0081950 3300046529 Bacteria 2660
116 Ga0495665_0007250 3300046531 Bacteria 5984
117 Ga0495640_0018874 3300046533 Bacteria 5102
118 Ga0495586_0012178 3300046535 Bacteria 4566
119 Ga0495587_0017312 3300046536 Bacteria 4478
120 Ga0495645_0008080 3300046543 Bacteria 7330
121 Ga0495645_0040265 3300046543 Bacteria 3409
122 Ga0495667_0013926 3300046559 Bacteria 5431
123 Ga0495667_0018121 3300046559 Bacteria 4756
124 Ga0495634_0008790 3300046642 Bacteria 7489
125 Ga0495634_0033643 3300046642 Bacteria 3521
126 Ga0495635_0007649 3300046663 Bacteria 7539
127 Ga0495635_0021144 3300046663 Bacteria 4534
128 Ga0495657_0021800 3300046675 Bacteria 4595
129 Ga0495599_0017003 3300046678 Bacteria 4518
130 Ga0495623_0018496 3300046679 Bacteria 4501
131 Ga0495646_0005281 3300046680 Bacteria 8151
132 Ga0495646_0015628 3300046680 Bacteria 4816
133 Ga0495647_0003115 3300046681 Bacteria 5302
134 Ga0495658_0011502 3300046683 Bacteria 4453
135 Ga0495613_0048191 3300046689 Bacteria 3146
136 Ga0495624_0002890 3300046690 Bacteria 12851
137 Ga0495600_0016502 3300046809 Bacteria 4687
138 Ga0495581_0003128 3300047315 Bacteria 9472
139 Ga0495604_0027982 3300047317 Bacteria 4483
140 Ga0495674_0035746 3300047319 Bacteria 4478
141 Ga0495680_0006078 3300047322 Bacteria 11277
142 Ga0495680_0029304 3300047322 Bacteria 4507
143 Ga0495675_0017546 3300047444 Bacteria 4537
144 Ga0495684_0024750 3300047471 Bacteria 4616
145 Ga0495602_0021551 3300048088 Bacteria 6338
146 Ga0495602_0042752 3300048088 Bacteria 4125
147 Ga0496102_0038848 3300048905 Bacteria 4298
148 Ga0496102_0049921 3300048905 Bacteria 3808
149 Ga0496109_0014147 3300048912 Bacteria 6937
150 Ga0496109_0015469 3300048912 Bacteria 6650
151 Ga0496109_0025349 3300048912 Bacteria 5283
152 Ga0496110_0009739 3300048913 Bacteria 7782
153 Ga0496110_0014786 3300048913 Bacteria 6485
154 Ga0496111_0007631 3300048914 Bacteria 7110
155 Ga0496114_0002294 3300048917 Bacteria 14585
156 Ga0496114_0106773 3300048917 Bacteria 2396
157 Ga0501034_0010462 3300049571 Bacteria 9659
158 Ga0501036_0001579 3300049572 Bacteria 17621
159 Ga0501037_0011619 3300049573 Bacteria 6484
160 Ga0501038_0022796 3300049574 Bacteria 5604
161 Ga0501040_0019954 3300049576 Bacteria 4463
162 Ga0501047_0029124 3300049581 Bacteria 5326
163 Ga0501047_0041467 3300049581 Bacteria 4447
164 Ga0501048_0032588 3300049582 Bacteria 3765
165 Ga0501048_0038755 3300049582 Bacteria 3420
166 Ga0501072_0010104 3300049588 Bacteria 7183
167 Ga0501072_0023771 3300049588 Bacteria 4760
168 Ga0501074_0004200 3300049590 Bacteria 10293
169 Ga0501076_0005087 3300049592 Bacteria 9414
170 Ga0501044_0023808 3300049823 Bacteria 6509
171 nmdc:mga05p37_923_c1 3300050507 Bacteria 33169
172 nmdc:mga09592_210_c1 3300050508 Bacteria 41927
173 nmdc:mga0qj67_7470_c1 3300050509 Bacteria 8073
174 nmdc:mga06r32_741_c1 3300050510 Bacteria 28591
175 nmdc:mga06r32_74_c1 3300050510 Bacteria 65502
176 nmdc:mga08y16_48641_c1 3300050511 Bacteria 4438
177 nmdc:mga08y16_71024_c1 3300050511 Bacteria 3629
178 Ga0495601_0011845 3300053077 Bacteria 5230
179 Ga0495601_0025180 3300053077 Bacteria 3668
180 Ga0495619_0006289 3300053085 Bacteria 7534
181 Ga0500577_0002250 3300053142 Bacteria 4927
182 2623588839 2622736626 Bacteria 7181580
183 2753264326 2751185782 Bacteria 11227053
184 2795782905 2795385470 Bacteria 8317180
185 Ga0207706_10004243
186 JGI25406J46586_10006197
187 JGI25406J46586_10006429
188 rootL2_10037214
189 Ga0070683_100018002
190 Ga0070680_100056402
191 Ga0070682_100016414
192 Ga0068868_100013080
193 Ga0070660_100035125
194 Ga0070689_100064954
195 Ga0070668_100000541
196 Ga0070668_100074004
197 Ga0070675_100001390
198 Ga0070659_100002996
199 Ga0070708_100059688
200 Ga0070706_100000187
201 Ga0070672_100044436
202 Ga0070664_100023691
203 Ga0068864_100059220
204 Ga0068858_100022555
205 Ga0068860_100035475
206 Ga0068860_100076854
207 Ga0081455_10000117
208 Ga0081455_10000613
209 Ga0081455_10003660
210 Ga0081455_10004754
211 Ga0081455_10032162
212 Ga0081538_10001937
213 Ga0081538_10007855
214 Ga0081540_1000372
215 Ga0081539_10000573
216 Ga0081539_10001275
217 Ga0081539_10001722
218 Ga0081539_10001798
219 Ga0081539_10003872
220 Ga0081539_10008130
221 Ga0070717_10003458
222 Ga0070717_10040902
223 Ga0075428_100001005
224 Ga0075430_100027480
225 Ga0075431_100000497
226 Ga0075431_100003085
227 Ga0075429_100035356
228 Ga0068865_100009155
229 Ga0111539_10006723
230 Ga0105243_10006027
231 Ga0105239_10103193
232 Ga0157369_10005200
233 Ga0157372_10005278
234 Ga0206356_10487880
235 Ga0206356_11219129
236 Ga0213875_10000618
237 Ga0207642_10006479
238 Ga0207688_10011694
239 Ga0207684_10002260
240 Ga0207657_10035953
241 Ga0207646_10012942
242 Ga0207646_10014346
243 Ga0207659_10029194
244 Ga0207690_10004592
245 Ga0207706_10017801
246 Ga0207689_10011599
247 Ga0207661_10057567
248 Ga0207677_10003706
249 Ga0207703_10023064
250 Ga0207675_100013356
251 Ga0207675_100025511
252 Ga0207675_100035205
253 Ga0207683_10022666
254 Ga0307515_10059059
255 Ga0307512_10003293
256 Ga0307509_10021270
257 Ga0307516_10002204
258 Ga0307415_100028674
259 Ga0373934_0005285
260 Ga0373923_0002940
261 Ga0373936_0003067
262 Ga0373945_0002791
263 Ga0373953_0001033
264 Ga0373953_0004311
265 Ga0373954_0007000
266 Ga0373956_0001894
267 Ga0373957_0002971
268 Ga0373943_0002458
269 Ga0373946_0004683
270 Ga0373955_0003491
271 Ga0373935_0034434
272 Ga0373933_0006951
273 Ga0373947_0031343
274 Ga0373937_0034512
275 Ga0395898_0041658
276 Ga0436364_0242713
277 Ga0436364_0406183
278 Ga0436364_0436299
279 Ga0395901_0018719
280 Ga0466967_0088657
281 Ga0495592_0022512
282 Ga0495603_0004803
283 Ga0495629_0016960
284 Ga0495629_0042759
285 Ga0495641_0005359
286 Ga0495651_0026413
287 Ga0495653_0027815
288 Ga0495580_0017772
289 Ga0495639_0002619
290 Ga0495662_0000950
291 Ga0495662_0024824
292 Ga0495664_0001263
293 Ga0495608_0016563
294 Ga0495618_0005491
295 Ga0495618_0008538
296 Ga0495628_0027851
297 Ga0495630_0002673
298 Ga0495630_0009643
299 Ga0495652_0081950
300 Ga0495665_0007250
301 Ga0495640_0018874
302 Ga0495586_0012178
303 Ga0495587_0017312
304 Ga0495645_0008080
305 Ga0495645_0040265
306 Ga0495667_0013926
307 Ga0495667_0018121
308 Ga0495634_0008790
309 Ga0495634_0033643
310 Ga0495635_0007649
311 Ga0495635_0021144
312 Ga0495657_0021800
313 Ga0495599_0017003
314 Ga0495623_0018496
315 Ga0495646_0005281
316 Ga0495646_0015628
317 Ga0495647_0003115
318 Ga0495658_0011502
319 Ga0495613_0048191
320 Ga0495624_0002890
321 Ga0495600_0016502
322 Ga0495581_0003128
323 Ga0495604_0027982
324 Ga0495674_0035746
325 Ga0495680_0006078
326 Ga0495680_0029304
327 Ga0495675_0017546
328 Ga0495684_0024750
329 Ga0495602_0021551
330 Ga0495602_0042752
331 Ga0496102_0038848
332 Ga0496102_0049921
333 Ga0496109_0014147
334 Ga0496109_0015469
335 Ga0496109_0025349
336 Ga0496110_0009739
337 Ga0496110_0014786
338 Ga0496111_0007631
339 Ga0496114_0002294
340 Ga0496114_0106773
341 Ga0501034_0010462
342 Ga0501036_0001579
343 Ga0501037_0011619
344 Ga0501038_0022796
345 Ga0501040_0019954
346 Ga0501047_0029124
347 Ga0501047_0041467
348 Ga0501048_0032588
349 Ga0501048_0038755
350 Ga0501072_0010104
351 Ga0501072_0023771
352 Ga0501074_0004200
353 Ga0501076_0005087
354 Ga0501044_0023808
355 nmdc:mga05p37_923_c1
356 nmdc:mga09592_210_c1
357 nmdc:mga0qj67_7470_c1
358 nmdc:mga06r32_741_c1
359 nmdc:mga06r32_74_c1
360 nmdc:mga08y16_48641_c1
361 nmdc:mga08y16_71024_c1
362 Ga0495601_0011845
363 Ga0495601_0025180
364 Ga0495619_0006289
365 Ga0500577_0002250
366 2623588839
367 2753264326
368 2795782905

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qsj-assembly2.cif.gz_B methylmannose polysaccharide hydrolase mmph from m. hassiacum 0.7766 381 761
7vma-assembly1.cif.gz_A the x-ray crystallographic structure of amylo-alpha-1,6-glucosidase from thermococcus gammatolerans stb12 0.7416 42 820
7vma-assembly1.cif.gz_A the x-ray crystallographic structure of amylo-alpha-1,6-glucosidase from thermococcus gammatolerans stb12 0.7384 42 820
7fe3-assembly1.cif.gz_A crystal structure of gh65 alpha-1,2-glucosidase from flavobacterium johnsoniae 0.679 31 809
7fe3-assembly1.cif.gz_A crystal structure of gh65 alpha-1,2-glucosidase from flavobacterium johnsoniae 0.674 31 809
ID Description Score Start End Superfamily
af_Q59005_266_613_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.778 380 760 1.50.10.10
2okxB05 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7255 332 760 1.50.10.10
af_Q4DSV3_173_279_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.7166 455 558 1.25.40.10
af_Q59005_266_613_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7159 380 760 1.50.10.10
2okxB05 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7142 332 760 1.50.10.10
ID Description Score Start End GO Terms
AF-A0A7W0NM60-F1-model_v4 Glycogen debranching protein 0.9798 463 880 GO:0005975
AF-A0A538EP65-F1-model_v4 Glycogen debranching protein 0.9789 152 880 GO:0005975
AF-A0A538EP65-F1-model_v4 Glycogen debranching protein 0.9762 152 880 GO:0005975
AF-A0A7Y6CHM2-F1-model_v4 Glycogen debranching protein 0.9759 32 880 GO:0005975
AF-A0A7W0NM60-F1-model_v4 Glycogen debranching protein 0.9748 463 880 GO:0005975

Map