F282310

General Info

Members Datasets Scaffolds Average Seq Length
184 171 94 428

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10036516|Ga0081539_100365164
Length 465
Sequence MVGAFVPEVTPAAGGPGRPTKIWIEDVEAYLNRKHRELRLINDCLHHPLPLSCPRSVADVIRHKFQLTAALKAEHARHDWTVTETAWAHQGQRRIGPFKFRYDYQRADLDVRGPSFYELQFGATETVYTASGMAAISALLLALTRVIGKADIVVLPGAYGETQEFIEGYVERFRMITLNCSSTGAAVPKSVSPRVVLLDSSASAPAFDAGLQQMDAAPDLLIFDTTCFSTGSGRIRRVLGLAQEFFIPVVMVRSHTKLDSLGAEYGRLGSVTFVDWENNVLSGSKLKELPTEVRNAVRLLGGAALPAHFPPYIGTPLYRELTDKRIAAILRNGRRASRYFATALPGLTAELHYVHGLYVTLGSRQKLEEASAKRAAAEMSRDLAEAGLPIQHAGSFGFDFAATEWFHNPTTGRYSVRIAVPDLPTTIWDDLIAASAQWWLAHQRQVAASAARSRRSFRAGRGPAA

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
3 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
4 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
5 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
6 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
7 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
8 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
9 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
10 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
11 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
12 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
13 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
14 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
15 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
16 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
17 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
18 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
19 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
20 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
21 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
22 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
23 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
24 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
25 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
26 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
27 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
28 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
29 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
30 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
31 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
32 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
33 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
34 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
35 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
36 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
37 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
38 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
39 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
40 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
41 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
42 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
43 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
44 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
45 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
46 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
47 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
48 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
49 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
50 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
51 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
52 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
53 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
54 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
55 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
56 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
57 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
58 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
59 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
60 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
61 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
62 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
63 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
64 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
65 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
66 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
67 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
68 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
69 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
70 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
71 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
72 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
73 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
74 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
75 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
76 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
77 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
78 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
79 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
80 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
81 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
82 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
83 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
84 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
85 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
86 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
87 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
88 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
89 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
90 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
91 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
92 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
93 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
94 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
95 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
96 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
97 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
98 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
99 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
100 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
101 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
106 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
107 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
108 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
112 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
113 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
114 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
115 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
116 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
120 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
123 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
126 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
127 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
128 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
129 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
130 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
133 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
134 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
135 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
138 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
139 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
142 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
145 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
146 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
147 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
148 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
149 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
150 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
151 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
152 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
153 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
154 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
155 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
156 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
157 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
158 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
159 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
160 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
161 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
162 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
163 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
164 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
165 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
166 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
167 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
168 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
169 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
170 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule
171 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 51.09
Metatranscriptomes 0
Isolates 48.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.07
Nodule 41.3
Rhizoplane 0
Rhizosphere 32.61
Stem 0
Stem Tuber 0
Unclassified 19.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10000893 3300003215 Bacteria 18145
2 rootH2_10063236 3300003320 Bacteria 4253
3 rootL2_10109209 3300003322 Bacteria 3590
4 rootH1_10192006 3300003323 Bacteria 1982
5 Ga0070669_100124004 3300005353 Bacteria 1975
6 Ga0070678_100068571 3300005456 Unclassified 2645
7 Ga0070665_100028313 3300005548 Bacteria 5644
8 Ga0070665_100143045 3300005548 Bacteria 2395
9 Ga0068859_100171480 3300005617 Bacteria 2251
10 Ga0068862_100023891 3300005844 Bacteria 5124
11 Ga0081540_1002168 3300005983 Bacteria 16264
12 Ga0081540_1013579 3300005983 Bacteria 5284
13 Ga0081539_10036516 3300005985 Bacteria 2940
14 Ga0075369_10003109 3300006186 Bacteria 6007
15 Ga0075366_10015024 3300006195 Bacteria 4427
16 Ga0075370_10005177 3300006353 Bacteria 6442
17 Ga0097620_100171478 3300006931 Bacteria 2251
18 Ga0099825_1029907 3300006941 Bacteria 2471
19 Ga0099824_1011797 3300006942 Bacteria 9748
20 Ga0099824_1022714 3300006942 Bacteria 4066
21 Ga0099822_1000022 3300006943 Bacteria 64942
22 Ga0111539_10189458 3300009094 Bacteria 2400
23 Ga0105237_10075703 3300009545 Bacteria 3357
24 Ga0105237_10235033 3300009545 Bacteria 1834
25 Ga0105238_10354605 3300009551 Bacteria 1456
26 Ga0105239_10040869 3300010375 Bacteria 5082
27 Ga0157374_10232626 3300013296 Bacteria 1811
28 Ga0163162_10372308 3300013306 Unclassified 1561
29 Ga0157375_10114068 3300013308 Bacteria 2804
30 Ga0157376_10089685 3300014969 Plasmid 2659
31 Ga0214544_1000002 3300021320 Bacteria 753857
32 Ga0214542_1000001 3300021321 Bacteria 1018696
33 Ga0214545_1000001 3300021324 Bacteria 1092817
34 Ga0214543_1000001 3300021327 Bacteria 776921
35 Ga0209233_1003316 3300025261 Bacteria 5707
36 Ga0209758_1000872 3300025297 Bacteria 41540
37 Ga0209758_1002851 3300025297 Bacteria 16786
38 Ga0207707_10192562 3300025912 Bacteria 1778
39 Ga0207652_10108774 3300025921 Bacteria 2457
40 Ga0207691_10100647 3300025940 Bacteria 2579
41 Ga0207668_10051736 3300025972 Bacteria 2838
42 Ga0209389_1000128 3300027296 Bacteria 67169
43 Ga0209389_1000347 3300027296 Bacteria 28159
44 Ga0209589_1000006 3300027357 Bacteria 436292
45 Ga0209589_1000180 3300027357 Bacteria 72900
46 Ga0209489_100007 3300027361 Bacteria 436292
47 Ga0209489_100031 3300027361 Bacteria 184074
48 Ga0209489_108360 3300027361 Bacteria 14214
49 Ga0209700_100008 3300027363 Bacteria 436292
50 Ga0209700_100010 3300027363 Bacteria 395269
51 Ga0268266_10084945 3300028379 Bacteria 2765
52 Ga0268266_10115836 3300028379 Bacteria 2380
53 Ga0268265_10024235 3300028380 Bacteria 4290
54 Ga0265319_1002504 3300028563 Bacteria 9971
55 Ga0265323_10001428 3300028653 Bacteria 11749
56 Ga0265336_10000162 3300028666 Bacteria 47251
57 Ga0265338_10001052 3300028800 Bacteria 46097
58 Ga0265324_10019607 3300029957 Bacteria 2434
59 Ga0307416_100256128 3300032002 Bacteria 1707
60 Ga0395905_0089596 3300037471 Bacteria 2883
61 Ga0436365_0458790 3300039437 Bacteria 3674
62 Ga0466972_0000899 3300044658 Bacteria 14290
63 Ga0466972_0021996 3300044658 Bacteria 3176
64 Ga0466965_0079189 3300044683 Bacteria 1660
65 Ga0466966_0010601 3300044684 Bacteria 6127
66 Ga0466961_0000111 3300044693 Bacteria 54212
67 Ga0466964_0014784 3300044706 Bacteria 2971
68 Ga0466957_0065908 3300044842 Bacteria 2232
69 Ga0466960_0018209 3300044901 Bacteria 3074
70 Ga0466959_0001042 3300045049 Bacteria 16587
71 Ga0466959_0036179 3300045049 Bacteria 3648
72 Ga0466967_0018760 3300045976 Bacteria 5540
73 Ga0495617_026248 3300046452 Bacteria 1961
74 Ga0495603_0105237 3300046455 Bacteria 1647
75 Ga0495590_0040077 3300046457 Bacteria 1634
76 Ga0495638_0036160 3300046460 Bacteria 3147
77 Ga0495605_0076135 3300046474 Bacteria 1577
78 Ga0495584_0020387 3300046491 Bacteria 3369
79 Ga0495610_0055634 3300046512 Bacteria 1906
80 Ga0495656_0003558 3300046615 Bacteria 5276
81 Ga0495625_0005673 3300046660 Bacteria 11305
82 Ga0495669_0006212 3300046684 Bacteria 4983
83 Ga0495670_0102754 3300046691 Bacteria 1473
84 Ga0495589_0045379 3300046794 Bacteria 2183
85 Ga0495604_0025559 3300047317 Bacteria 4705
86 Ga0495683_0052088 3300047323 Bacteria 2044
87 Ga0495673_0081200 3300047469 Bacteria 1343
88 Ga0495686_0007322 3300047472 Bacteria 8283
89 Ga0500641_0007096 3300053096 Bacteria 3988
90 Ga0500556_0013381 3300053104 Bacteria 2481
91 Ga0500557_000002 3300053105 Bacteria 234207
92 Ga0500642_0000043 3300053130 Bacteria 84852
93 Ga0500636_0039124 3300053177 Bacteria 2805
94 Ga0500625_001907 3300053729 Bacteria 7497

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 8016583857 8016592111 351
2 iso_pu_bacteria 8019608314 8019608839 353
3 iso_pu_bacteria 8016522445 8016529906 381
4 3300046455 Ga0495603_0105237 Ga0495603_0105237_47_1207 385
5 iso_pu_bacteria 2513237094 2513639217 396
6 3300044842 Ga0466957_0065908 Ga0466957_0065908_709_1986 402
7 3300045049 Ga0466959_0036179 Ga0466959_0036179_361_1572 402
8 3300045976 Ga0466967_0018760 Ga0466967_0018760_3526_4803 402
9 3300014969 Ga0157376_10089685 Ga0157376_100896853 403
10 3300046691 Ga0495670_0102754 Ga0495670_0102754_210_1427 404
11 iso_pu_bacteria 2906643746 2906647796 405
12 3300032002 Ga0307416_100256128 Ga0307416_1002561282 409
13 iso_pu_bacteria 2935684952 2935690856 411
14 iso_pu_bacteria 2935713505 2935718237 411
15 iso_pu_bacteria 2935722832 2935727782 411
16 iso_pu_bacteria 2935732158 2935736486 411
17 iso_pu_bacteria 2935741537 2935745865 411
18 iso_pu_bacteria 2935750917 2935756246 411
19 iso_pu_bacteria 2940556831 2940561779 411
20 3300003323 rootH1_10192006 rootH1_101920062 412
21 iso_pu_bacteria 2935769743 2935775094 412
22 iso_pu_bacteria 2935777560 2935784661 412
23 iso_pu_bacteria 8016530956 8016535140 412
24 iso_pu_bacteria 8016548790 8016553782 412
25 iso_pu_bacteria 8016557553 8016562158 412
26 iso_pu_bacteria 8016566248 8016573482 412
27 iso_pu_bacteria 8016575299 8016577610 412
28 iso_pu_bacteria 8016595262 8016599974 412
29 iso_pu_bacteria 8016603502 8016610829 412
30 iso_pu_bacteria 8016613128 8016614136 412
31 iso_pu_bacteria 8016622563 8016626842 412
32 iso_pu_bacteria 8019530166 8019534891 412
33 iso_pu_bacteria 8019538911 8019544576 412
34 iso_pu_bacteria 8019547302 8019553954 412
35 3300005353 Ga0070669_100124004 Ga0070669_1001240042 413
36 3300005844 Ga0068862_100023891 Ga0068862_1000238915 413
37 3300009094 Ga0111539_10189458 Ga0111539_101894581 413
38 3300013308 Ga0157375_10114068 Ga0157375_101140683 413
39 3300025940 Ga0207691_10100647 Ga0207691_101006473 413
40 3300025972 Ga0207668_10051736 Ga0207668_100517364 413
41 3300028380 Ga0268265_10024235 Ga0268265_100242353 413
42 iso_pu_bacteria 2932784394 2932792301 413
43 iso_pu_bacteria 2513237137 2513861912 415
44 iso_pu_bacteria 2517572143 2517891929 415
45 iso_pu_bacteria 2935785616 2935791689 416
46 iso_pu_bacteria 2935793552 2935800079 416
47 3300005548 Ga0070665_100028313 Ga0070665_1000283133 417
48 3300028379 Ga0268266_10115836 Ga0268266_101158362 417
49 3300053104 Ga0500556_0013381 Ga0500556_0013381_174_1430 417
50 iso_pu_bacteria 2879099564 2879102467 417
51 iso_pu_bacteria 2932818245 2932826405 417
52 iso_pu_bacteria 2932828146 2932836450 417
53 iso_pu_bacteria 2935703347 2935711164 417
54 iso_pu_bacteria 8016511872 8016512555 417
55 iso_pu_bacteria 8017057580 8017067080 417
56 iso_pu_bacteria 8019576017 8019586123 417
57 iso_pu_bacteria 8019586578 8019586788 417
58 iso_pu_bacteria 8019597564 8019608276 417
59 3300009545 Ga0105237_10075703 Ga0105237_100757033 418
60 3300009551 Ga0105238_10354605 Ga0105238_103546051 418
61 iso_pu_bacteria 2513237096 2513660610 418
62 iso_pu_bacteria 2513237102 2513699227 418
63 iso_pu_bacteria 2513237145 2513922340 418
64 iso_pu_bacteria 2824617872 2824622715 418
65 iso_pu_bacteria 2824626560 2824631836 418
66 iso_pu_bacteria 2824635225 2824639069 418
67 iso_pu_bacteria 2824644064 2824651151 418
68 iso_pu_bacteria 2824714736 2824721401 418
69 iso_pu_bacteria 2824723954 2824730879 418
70 iso_pu_bacteria 2857509624 2857514041 418
71 iso_pu_bacteria 2881364244 2881371646 418
72 3300053105 Ga0500557_000002 Ga0500557_000002_155006_156274 419
73 3300053130 Ga0500642_0000043 Ga0500642_0000043_47852_49120 419
74 3300053177 Ga0500636_0039124 Ga0500636_0039124_655_1923 419
75 3300053729 Ga0500625_001907 Ga0500625_001907_2292_3560 419
76 iso_pu_bacteria 2874620515 2874627335 420
77 iso_pu_bacteria 2876808645 2876815802 420
78 iso_pu_bacteria 2879110137 2879110809 420
79 iso_pu_bacteria 2904666416 2904671147 420
80 iso_pu_bacteria 3005594810 3005599001 420
81 iso_pu_bacteria 8056673599 8056677545 420
82 3300005548 Ga0070665_100143045 Ga0070665_1001430453 421
83 3300013296 Ga0157374_10232626 Ga0157374_102326261 421
84 3300028379 Ga0268266_10084945 Ga0268266_100849452 421
85 3300039437 Ga0436365_0458790 Ga0436365_0458790_2187_3479 421
86 3300046452 Ga0495617_026248 Ga0495617_026248_281_1549 421
87 3300046457 Ga0495590_0040077 Ga0495590_0040077_279_1547 421
88 3300046460 Ga0495638_0036160 Ga0495638_0036160_943_2211 421
89 3300046491 Ga0495584_0020387 Ga0495584_0020387_2020_3288 421
90 3300046512 Ga0495610_0055634 Ga0495610_0055634_125_1393 421
91 3300046615 Ga0495656_0003558 Ga0495656_0003558_826_2094 421
92 3300046660 Ga0495625_0005673 Ga0495625_0005673_2806_4074 421
93 3300046684 Ga0495669_0006212 Ga0495669_0006212_3383_4651 421
94 3300046794 Ga0495589_0045379 Ga0495589_0045379_714_1982 421
95 3300047317 Ga0495604_0025559 Ga0495604_0025559_3287_4555 421
96 3300047323 Ga0495683_0052088 Ga0495683_0052088_433_1701 421
97 3300047469 Ga0495673_0081200 Ga0495673_0081200_46_1314 421
98 3300047472 Ga0495686_0007322 Ga0495686_0007322_2692_3960 421
99 3300053096 Ga0500641_0007096 Ga0500641_0007096_452_1720 421
100 iso_pu_bacteria 2517093001 2517101473 421
101 iso_pu_bacteria 2824704595 2824712603 421
102 iso_pu_bacteria 2824753945 2824762784 421
103 iso_pu_bacteria 2824763712 2824770171 421
104 iso_pu_bacteria 2904711408 2904720788 421
105 3300046474 Ga0495605_0076135 Ga0495605_0076135_101_1378 422
106 iso_pu_bacteria 2617270741 2617376015 422
107 iso_pu_bacteria 2824732956 2824739599 422
108 iso_pu_bacteria 2824746037 2824749365 422
109 iso_pu_bacteria 2842038055 2842039310 422
110 iso_pu_bacteria 2842045827 2842047743 422
111 iso_pu_bacteria 2847930680 2847935919 422
112 iso_pu_bacteria 2879083081 2879085445 422
113 iso_pu_bacteria 2908775508 2908779907 422
114 iso_pu_bacteria 3005483717 3005487116 422
115 3300044658 Ga0466972_0000899 Ga0466972_0000899_2425_3723 423
116 3300044683 Ga0466965_0079189 Ga0466965_0079189_131_1429 423
117 iso_pu_bacteria 2513237092 2513625894 423
118 iso_pu_bacteria 2513237139 2513872547 423
119 iso_pu_bacteria 2513237161 2514012076 423
120 iso_pu_bacteria 2617270735 2617348768 423
121 iso_pu_bacteria 2802429603 2805917866 423
122 iso_pu_bacteria 2824679649 2824687309 423
123 iso_pu_bacteria 2824696289 2824698242 423
124 iso_pu_bacteria 2824773399 2824776551 423
125 iso_pu_bacteria 2841974524 2841975232 423
126 iso_pu_bacteria 2847939898 2847946320 423
127 iso_pu_bacteria 2849076700 2849079541 423
128 iso_pu_bacteria 2922393267 2922397799 423
129 iso_pu_bacteria 3005506211 3005510023 423
130 iso_pu_bacteria 3005587118 3005590204 423
131 3300003320 rootH2_10063236 rootH2_100632363 424
132 3300003322 rootL2_10109209 rootL2_101092094 424
133 3300005617 Ga0068859_100171480 Ga0068859_1001714801 424
134 3300005983 Ga0081540_1002168 Ga0081540_10021687 424
135 3300005985 Ga0081539_10036516 Ga0081539_100365164 424
136 3300006931 Ga0097620_100171478 Ga0097620_1001714782 424
137 3300025297 Ga0209758_1002851 Ga0209758_10028514 424
138 3300025912 Ga0207707_10192562 Ga0207707_101925621 424
139 3300025921 Ga0207652_10108774 Ga0207652_101087743 424
140 3300028563 Ga0265319_1002504 Ga0265319_10025047 424
141 3300028653 Ga0265323_10001428 Ga0265323_100014286 424
142 3300028666 Ga0265336_10000162 Ga0265336_1000016218 424
143 3300028800 Ga0265338_10001052 Ga0265338_1000105210 424
144 3300029957 Ga0265324_10019607 Ga0265324_100196072 424
145 3300044684 Ga0466966_0010601 Ga0466966_0010601_3846_5213 424
146 3300044693 Ga0466961_0000111 Ga0466961_0000111_37184_38551 424
147 3300044706 Ga0466964_0014784 Ga0466964_0014784_1210_2592 424
148 3300045049 Ga0466959_0001042 Ga0466959_0001042_2149_3516 424
149 iso_pu_bacteria 2885366525 2885372268 424
150 3300005456 Ga0070678_100068571 Ga0070678_1000685712 425
151 3300005983 Ga0081540_1013579 Ga0081540_10135791 425
152 3300009545 Ga0105237_10235033 Ga0105237_102350332 425
153 3300013306 Ga0163162_10372308 Ga0163162_103723081 425
154 3300006186 Ga0075369_10003109 Ga0075369_100031099 426
155 3300006195 Ga0075366_10015024 Ga0075366_100150244 426
156 3300006353 Ga0075370_10005177 Ga0075370_100051774 426
157 3300006941 Ga0099825_1029907 Ga0099825_10299072 426
158 3300006942 Ga0099824_1022714 Ga0099824_10227142 426
159 3300006943 Ga0099822_1000022 Ga0099822_10000227 426
160 3300021320 Ga0214544_1000002 Ga0214544_1000002660 426
161 3300021321 Ga0214542_1000001 Ga0214542_10000011010 426
162 3300021324 Ga0214545_1000001 Ga0214545_10000011076 426
163 3300021327 Ga0214543_1000001 Ga0214543_1000001118 426
164 3300027296 Ga0209389_1000347 Ga0209389_10003478 426
165 3300027357 Ga0209589_1000006 Ga0209589_1000006375 426
166 3300027361 Ga0209489_100007 Ga0209489_100007375 426
167 3300027361 Ga0209489_108360 Ga0209489_1083608 426
168 3300027363 Ga0209700_100008 Ga0209700_100008375 426
169 3300027363 Ga0209700_100010 Ga0209700_10001073 426
170 3300006942 Ga0099824_1011797 Ga0099824_10117972 427
171 3300010375 Ga0105239_10040869 Ga0105239_100408694 427
172 3300025261 Ga0209233_1003316 Ga0209233_10033163 427
173 3300027296 Ga0209389_1000128 Ga0209389_100012853 427
174 3300027357 Ga0209589_1000180 Ga0209589_100018058 427
175 3300027361 Ga0209489_100031 Ga0209489_100031169 427
176 3300037471 Ga0395905_0089596 Ga0395905_0089596_1116_2399 427
177 3300044658 Ga0466972_0021996 Ga0466972_0021996_990_2306 427
178 3300044901 Ga0466960_0018209 Ga0466960_0018209_1208_2524 427
179 iso_pu_bacteria 2508501128 2509154553 427
180 iso_pu_bacteria 2824671348 2824673902 427
181 iso_pu_bacteria 2824687955 2824690463 427
182 iso_pu_bacteria 8019648815 8019658138 427
183 3300003215 JGI25153J46596_10000893 JGI25153J46596_100008936 428
184 3300025297 Ga0209758_1000872 Ga0209758_100087214 428

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dna-assembly6.cif.gz_F crystal structure of t110a mutant human glutamate oxaloacetate transaminase 1 (got1) 0.6801 102 328
2bwo-assembly2.cif.gz_D 5-aminolevulinate synthase from rhodobacter capsulatus in complex with succinyl-coa 0.6672 104 417
2x8u-assembly1.cif.gz_B sphingomonas wittichii serine palmitoyltransferase 0.6581 93 419
5qqr-assembly1.cif.gz_B pandda analysis group deposition -- crystal structure of human alas2a in complex with z1171217421 0.6574 93 419
5jay-assembly1.cif.gz_A crystal structure of an 8-amino-7-oxononanoate synthase from burkholderia xenovorans 0.6481 102 415
ID Description Score Start End Superfamily
2aatA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7152 102 302 3.40.640.10
af_Q94I44_77_334_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7109 104 301 3.40.640.10
af_A0A1D8PL85_69_320_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7005 102 301 3.40.640.10
af_Q55DV9_2_251_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.6884 104 300 3.40.640.10
4effA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.685 102 300 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A170Q5D1-F1-model_v4 deleted 0.9644 305 422
AF-A0A410V7A3-F1-model_v4 deleted 0.9521 1 422
AF-A0A840GN18-F1-model_v4 Uncharacterized protein 0.9479 102 427
AF-A0A410V7A3-F1-model_v4 deleted 0.9434 1 422
AF-A0A840GN18-F1-model_v4 Uncharacterized protein 0.9395 102 427

Feature Viewer

pLDDT pTM Quality
80.35 0.84 High
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Predicted Structure (AlphaFold2)

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