F281687

General Info

Members Datasets Scaffolds Average Seq Length
183 149 366 335

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857481737|2857485342
Length 402
Sequence DGFRADWAQKDFYAELGVKKDATAEEIKKAYRRLARANHPDSHPDDQAKHDKFKAVAEAYDVVGDADKRAKYDEMRRLHGSGGGGFGGGFGTNRGGGGGGFNVEDLLRDRGGAGGFGDMFGDLFGGGGTRGRTRTQPRPQKGADAETTATISFTDAIDGVTISLRLTSDAPCPDCNGTGGKPGTQPRICPECEGAGFVVNQVGGGFSMNETCPSCGGRQLVYDEACPTCGGSGHGMSARSIQARIPAGVKDGQRIRLKGKGASGSDGGPAGDLYVTVKVSSHPVFGRKGDNLTIDVPVAFDEAVLGADIKIPTLGGAPVTVKIPAGTPTGRTFRVRGKGAPRADGSRGDLLTTVEVQVPAVVDDATRAAVEAYREAQAPARAAKPLRANLFGEQPSGPSTES

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
5 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
6 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
9 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
17 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
21 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
22 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
23 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
25 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
42 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
43 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
44 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
45 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
46 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
47 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
48 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
49 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
50 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
51 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
52 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
53 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
54 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
55 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
56 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
57 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
61 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
62 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
63 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
64 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
65 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
66 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
67 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
68 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
69 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
70 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
71 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
74 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
75 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
76 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
77 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
78 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
79 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
80 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
84 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
85 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
86 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
87 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
88 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
89 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
90 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
91 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
92 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
93 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
94 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
95 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
98 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
99 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
100 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
101 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
102 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
119 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
124 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
125 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
126 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
127 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
128 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
129 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
130 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
131 2643221590 Nocardioides sp. Root682 Isolate Unclassified
132 2643221604 Nocardioides sp. Root190 Isolate Unclassified
133 2643221615 Nocardioides sp. Root224 Isolate Unclassified
134 2643221617 Nocardioides sp. Root79 Isolate Unclassified
135 2643221620 Nocardioides sp. Root240 Isolate Unclassified
136 2643221641 Nocardioides sp. Root122 Isolate Unclassified
137 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
138 2738541305 Nocardioides sp. CF167 Isolate Unclassified
139 2739367898 Nocardioides sp. CF479 Isolate Unclassified
140 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
141 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
142 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
143 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
144 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
145 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
146 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
147 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
148 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
149 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.98
Metatranscriptomes 0.55
Isolates 11.48

Biome Distribution

Category Percentage (%)
Aerial Root 1.09
Bulb 0
Endosphere 6.56
Nodule 0.55
Rhizoplane 2.73
Rhizosphere 78.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000035 3300003214 Bacteria 290723
2 Ga0070674_100032285 3300005356 Bacteria 3476
3 Ga0070714_100037303 3300005435 Bacteria 4083
4 Ga0070714_100134759 3300005435 Bacteria 2211
5 Ga0070663_100112241 3300005455 Bacteria 2050
6 Ga0070672_100343294 3300005543 Bacteria 1272
7 Ga0070665_100000566 3300005548 Bacteria 51646
8 Ga0068856_100022901 3300005614 Bacteria 6075
9 Ga0070702_100086506 3300005615 Bacteria 1891
10 Ga0081540_1000946 3300005983 Bacteria 26162
11 Ga0070717_10057123 3300006028 Bacteria 3225
12 Ga0070717_10355082 3300006028 Bacteria 1311
13 Ga0075365_10024287 3300006038 Bacteria 3821
14 Ga0075368_10077870 3300006042 Bacteria 1346
15 Ga0075363_100007315 3300006048 Bacteria 5064
16 Ga0075363_100031285 3300006048 Bacteria 2758
17 Ga0075363_100159870 3300006048 Bacteria 1275
18 Ga0075370_10026367 3300006353 Bacteria 3219
19 Ga0075370_10055548 3300006353 Bacteria 2250
20 Ga0075433_10009820 3300006852 Bacteria 7671
21 Ga0075433_10065969 3300006852 Bacteria 3175
22 Ga0075434_100127956 3300006871 Bacteria 2557
23 Ga0075435_100078050 3300007076 Bacteria 2715
24 Ga0111539_10369118 3300009094 Bacteria 1670
25 Ga0114129_10002162 3300009147 Bacteria 27082
26 Ga0114129_10073662 3300009147 Bacteria 4758
27 Ga0105241_10023217 3300009174 Bacteria 4598
28 Ga0157375_10536683 3300013308 Bacteria 1332
29 Ga0163163_10558310 3300014325 Bacteria 1208
30 Ga0206356_10714364 3300020070 Bacteria 4442
31 Ga0209233_1000006 3300025261 Bacteria 1473685
32 Ga0207642_10053356 3300025899 Bacteria 1839
33 Ga0207685_10030008 3300025905 Bacteria 1932
34 Ga0207699_10001842 3300025906 Bacteria 9973
35 Ga0207654_10057598 3300025911 Bacteria 2259
36 Ga0207707_10310449 3300025912 Bacteria 1363
37 Ga0207693_10109564 3300025915 Bacteria 2166
38 Ga0207663_10006326 3300025916 Bacteria 6049
39 Ga0207660_10174297 3300025917 Bacteria 1667
40 Ga0207700_10018834 3300025928 Bacteria 4650
41 Ga0207664_10062786 3300025929 Bacteria 2967
42 Ga0207678_10122052 3300026067 Bacteria 2223
43 Ga0207702_10147672 3300026078 Bacteria 2135
44 Ga0207641_10238076 3300026088 Bacteria 1695
45 Ga0207648_10165783 3300026089 Bacteria 1952
46 Ga0207683_10055281 3300026121 Bacteria 3481
47 Ga0268266_10005574 3300028379 Bacteria 11702
48 Ga0307412_10149681 3300031911 Bacteria 1721
49 Ga0307415_100114029 3300032126 Bacteria 2011
50 Ga0373930_0004225 3300034816 Bacteria 2323
51 Ga0373948_0000283 3300034817 Bacteria 6119
52 Ga0373951_0004895 3300035091 Bacteria 3143
53 Ga0373923_0056644 3300035111 Bacteria 1655
54 Ga0373932_0021484 3300035112 Bacteria 1704
55 Ga0373945_0027074 3300035116 Bacteria 2001
56 Ga0373953_0046108 3300035117 Bacteria 1749
57 Ga0373957_0041527 3300035120 Bacteria 1732
58 Ga0373960_0010240 3300035121 Bacteria 2286
59 Ga0373955_0022903 3300035172 Bacteria 3175
60 Ga0373962_0005081 3300035242 Bacteria 3179
61 Ga0373931_0023155 3300035691 Bacteria 3134
62 Ga0373935_0043090 3300035692 Bacteria 2839
63 Ga0373935_0076342 3300035692 Bacteria 2169
64 Ga0373927_0026246 3300035695 Bacteria 3806
65 Ga0373937_0024754 3300036401 Bacteria 5417
66 Ga0373937_0064320 3300036401 Bacteria 3373
67 Ga0395900_0049994 3300037418 Bacteria 4307
68 Ga0395900_0062230 3300037418 Bacteria 3836
69 Ga0395898_0115611 3300037466 Bacteria 2571
70 Ga0395898_0200739 3300037466 Bacteria 1904
71 Ga0436364_1011266 3300037853 Bacteria 2550
72 Ga0400483_182325 3300039062 Bacteria 71334
73 Ga0436365_1615335 3300039437 Bacteria 1682
74 Ga0436362_0718556 3300039453 Bacteria 4688
75 Ga0451853_2196778 3300041512 Bacteria 1393
76 Ga0466972_0037436 3300044658 Bacteria 2372
77 Ga0466965_0011584 3300044683 Bacteria 4134
78 Ga0466964_0007789 3300044706 Bacteria 4010
79 Ga0466968_0006804 3300044735 Bacteria 4326
80 Ga0466970_0003093 3300044765 Bacteria 8074
81 Ga0466970_0004820 3300044765 Bacteria 6664
82 Ga0466957_0029597 3300044842 Bacteria 3266
83 Ga0466960_0003109 3300044901 Bacteria 6357
84 Ga0466967_0086763 3300045976 Bacteria 2836
85 Ga0466967_0099973 3300045976 Bacteria 2650
86 Ga0495629_0013289 3300046459 Bacteria 5941
87 Ga0495629_0051033 3300046459 Bacteria 2895
88 Ga0495641_0031840 3300046461 Bacteria 2516
89 Ga0495651_0013869 3300046462 Bacteria 6234
90 Ga0495651_0044667 3300046462 Bacteria 3433
91 Ga0495653_0011258 3300046463 Bacteria 7310
92 Ga0495653_0035481 3300046463 Bacteria 3935
93 Ga0495580_0039683 3300046472 Bacteria 3368
94 Ga0495582_0044551 3300046473 Bacteria 2443
95 Ga0495582_0121425 3300046473 Bacteria 1472
96 Ga0495664_0010139 3300046477 Bacteria 5286
97 Ga0495664_0021852 3300046477 Bacteria 3699
98 Ga0495664_0056348 3300046477 Bacteria 2338
99 Ga0495608_0034511 3300046511 Bacteria 3414
100 Ga0495618_0110940 3300046514 Bacteria 1756
101 Ga0495630_0061566 3300046517 Bacteria 2818
102 Ga0495666_0038120 3300046526 Bacteria 2338
103 Ga0495652_0170157 3300046529 Bacteria 1682
104 Ga0495665_0027291 3300046531 Bacteria 3065
105 Ga0495587_0010741 3300046536 Bacteria 5813
106 Ga0495587_0031692 3300046536 Bacteria 3199
107 Ga0495645_0128314 3300046543 Bacteria 1780
108 Ga0495667_0045983 3300046559 Bacteria 2887
109 Ga0495667_0113195 3300046559 Bacteria 1753
110 Ga0495634_0050469 3300046642 Bacteria 2793
111 Ga0495634_0082581 3300046642 Bacteria 2099
112 Ga0495635_0111498 3300046663 Bacteria 1868
113 Ga0495599_0044164 3300046678 Bacteria 2795
114 Ga0495599_0121105 3300046678 Bacteria 1626
115 Ga0495623_0053482 3300046679 Bacteria 2549
116 Ga0495623_0104396 3300046679 Bacteria 1723
117 Ga0495646_0009545 3300046680 Bacteria 6158
118 Ga0495646_0077622 3300046680 Bacteria 1942
119 Ga0495600_0006765 3300046809 Bacteria 6991
120 Ga0495581_0044666 3300047315 Bacteria 2562
121 Ga0495581_0074596 3300047315 Bacteria 1963
122 Ga0495604_0048873 3300047317 Bacteria 3289
123 Ga0495674_0010191 3300047319 Bacteria 8903
124 Ga0495674_0075223 3300047319 Bacteria 2906
125 Ga0495674_0098382 3300047319 Bacteria 2491
126 Ga0495680_0046740 3300047322 Bacteria 3410
127 Ga0495680_0131132 3300047322 Bacteria 1841
128 Ga0495675_0092331 3300047444 Bacteria 1899
129 Ga0495684_0056358 3300047471 Bacteria 2996
130 Ga0495684_0183862 3300047471 Bacteria 1548
131 Ga0495602_0156558 3300048088 Bacteria 1783
132 Ga0495614_0015551 3300048089 Bacteria 3317
133 Ga0496101_0043348 3300048904 Bacteria 3216
134 Ga0496107_0114346 3300048910 Bacteria 1985
135 Ga0496109_0175146 3300048912 Bacteria 2013
136 Ga0496114_0025188 3300048917 Bacteria 4861
137 Ga0496115_0019702 3300048918 Bacteria 5194
138 Ga0501034_0011936 3300049571 Bacteria 8979
139 Ga0501036_0004447 3300049572 Bacteria 11324
140 Ga0501037_0013664 3300049573 Bacteria 5981
141 Ga0501038_0000498 3300049574 Bacteria 34537
142 Ga0501038_0084648 3300049574 Bacteria 2668
143 Ga0501040_0101445 3300049576 Bacteria 2008
144 Ga0501042_0043148 3300049578 Bacteria 3211
145 Ga0501047_0009032 3300049581 Bacteria 9411
146 Ga0501080_0242792 3300049742 Bacteria 1644
147 Ga0501035_0018560 3300049822 Bacteria 6407
148 Ga0501044_0006528 3300049823 Bacteria 12883
149 nmdc:mga03n38_19455_c1 3300050490 Bacteria 2699
150 nmdc:mga0yw44_48867_c1 3300050492 Bacteria 2551
151 nmdc:mga0yw44_79293_c1 3300050492 Bacteria 2054
152 nmdc:mga05p37_7640_c1 3300050507 Bacteria 12757
153 nmdc:mga09592_140651_c1 3300050508 Bacteria 2080
154 nmdc:mga08y16_31982_c1 3300050511 Bacteria 5532
155 nmdc:mga0n895_14839_c1 3300050512 Bacteria 7091
156 nmdc:mga0n895_84458_c1 3300050512 Bacteria 3168
157 nmdc:mga0rr50_22755_c1 3300050513 Bacteria 4308
158 Ga0495601_0069116 3300053077 Bacteria 2252
159 Ga0495612_0016414 3300053078 Bacteria 2968
160 Ga0495595_0027064 3300053084 Bacteria 2552
161 Ga0466962_0007050 3300061719 Bacteria 5386
162 Ga0466962_0019735 3300061719 Bacteria 3238
163 2857485342 2857481737 Bacteria 4761446
164 2512735039 2512564039 Bacteria 8739048
165 2643959601 2643221590 Bacteria 5214697
166 2644032951 2643221604 Bacteria 5014917
167 2644092919 2643221615 Bacteria 5487866
168 2644100558 2643221617 Bacteria 5139111
169 2644116966 2643221620 Bacteria 5134593
170 2644228286 2643221641 Bacteria 4490190
171 2644322532 2643221657 Bacteria 5490246
172 2738869446 2738541305 Bacteria 4910150
173 2740165768 2739367898 Bacteria 4367674
174 2774396025 2773857762 Bacteria 5971770
175 2809197688 2808606439 Bacteria 5952208
176 2812330951 2811994874 Bacteria 5367947
177 2812347842 2811994878 Bacteria 5992952
178 2891968765 2891968417 Bacteria 5821697
179 2916973736 2916971899 Bacteria 4250608
180 2984578667 2984576629 Bacteria 4248407
181 2990259473 2990256926 Bacteria 4252839
182 8054612272 8054609563 Bacteria 5170090
183 8056064687 8056060235 Bacteria 7259403
184 JGI25165J46597_1000035
185 Ga0070674_100032285
186 Ga0070714_100037303
187 Ga0070714_100134759
188 Ga0070663_100112241
189 Ga0070672_100343294
190 Ga0070665_100000566
191 Ga0068856_100022901
192 Ga0070702_100086506
193 Ga0081540_1000946
194 Ga0070717_10057123
195 Ga0070717_10355082
196 Ga0075365_10024287
197 Ga0075368_10077870
198 Ga0075363_100007315
199 Ga0075363_100031285
200 Ga0075363_100159870
201 Ga0075370_10026367
202 Ga0075370_10055548
203 Ga0075433_10009820
204 Ga0075433_10065969
205 Ga0075434_100127956
206 Ga0075435_100078050
207 Ga0111539_10369118
208 Ga0114129_10002162
209 Ga0114129_10073662
210 Ga0105241_10023217
211 Ga0157375_10536683
212 Ga0163163_10558310
213 Ga0206356_10714364
214 Ga0209233_1000006
215 Ga0207642_10053356
216 Ga0207685_10030008
217 Ga0207699_10001842
218 Ga0207654_10057598
219 Ga0207707_10310449
220 Ga0207693_10109564
221 Ga0207663_10006326
222 Ga0207660_10174297
223 Ga0207700_10018834
224 Ga0207664_10062786
225 Ga0207678_10122052
226 Ga0207702_10147672
227 Ga0207641_10238076
228 Ga0207648_10165783
229 Ga0207683_10055281
230 Ga0268266_10005574
231 Ga0307412_10149681
232 Ga0307415_100114029
233 Ga0373930_0004225
234 Ga0373948_0000283
235 Ga0373951_0004895
236 Ga0373923_0056644
237 Ga0373932_0021484
238 Ga0373945_0027074
239 Ga0373953_0046108
240 Ga0373957_0041527
241 Ga0373960_0010240
242 Ga0373955_0022903
243 Ga0373962_0005081
244 Ga0373931_0023155
245 Ga0373935_0043090
246 Ga0373935_0076342
247 Ga0373927_0026246
248 Ga0373937_0024754
249 Ga0373937_0064320
250 Ga0395900_0049994
251 Ga0395900_0062230
252 Ga0395898_0115611
253 Ga0395898_0200739
254 Ga0436364_1011266
255 Ga0400483_182325
256 Ga0436365_1615335
257 Ga0436362_0718556
258 Ga0451853_2196778
259 Ga0466972_0037436
260 Ga0466965_0011584
261 Ga0466964_0007789
262 Ga0466968_0006804
263 Ga0466970_0003093
264 Ga0466970_0004820
265 Ga0466957_0029597
266 Ga0466960_0003109
267 Ga0466967_0086763
268 Ga0466967_0099973
269 Ga0495629_0013289
270 Ga0495629_0051033
271 Ga0495641_0031840
272 Ga0495651_0013869
273 Ga0495651_0044667
274 Ga0495653_0011258
275 Ga0495653_0035481
276 Ga0495580_0039683
277 Ga0495582_0044551
278 Ga0495582_0121425
279 Ga0495664_0010139
280 Ga0495664_0021852
281 Ga0495664_0056348
282 Ga0495608_0034511
283 Ga0495618_0110940
284 Ga0495630_0061566
285 Ga0495666_0038120
286 Ga0495652_0170157
287 Ga0495665_0027291
288 Ga0495587_0010741
289 Ga0495587_0031692
290 Ga0495645_0128314
291 Ga0495667_0045983
292 Ga0495667_0113195
293 Ga0495634_0050469
294 Ga0495634_0082581
295 Ga0495635_0111498
296 Ga0495599_0044164
297 Ga0495599_0121105
298 Ga0495623_0053482
299 Ga0495623_0104396
300 Ga0495646_0009545
301 Ga0495646_0077622
302 Ga0495600_0006765
303 Ga0495581_0044666
304 Ga0495581_0074596
305 Ga0495604_0048873
306 Ga0495674_0010191
307 Ga0495674_0075223
308 Ga0495674_0098382
309 Ga0495680_0046740
310 Ga0495680_0131132
311 Ga0495675_0092331
312 Ga0495684_0056358
313 Ga0495684_0183862
314 Ga0495602_0156558
315 Ga0495614_0015551
316 Ga0496101_0043348
317 Ga0496107_0114346
318 Ga0496109_0175146
319 Ga0496114_0025188
320 Ga0496115_0019702
321 Ga0501034_0011936
322 Ga0501036_0004447
323 Ga0501037_0013664
324 Ga0501038_0000498
325 Ga0501038_0084648
326 Ga0501040_0101445
327 Ga0501042_0043148
328 Ga0501047_0009032
329 Ga0501080_0242792
330 Ga0501035_0018560
331 Ga0501044_0006528
332 nmdc:mga03n38_19455_c1
333 nmdc:mga0yw44_48867_c1
334 nmdc:mga0yw44_79293_c1
335 nmdc:mga05p37_7640_c1
336 nmdc:mga09592_140651_c1
337 nmdc:mga08y16_31982_c1
338 nmdc:mga0n895_14839_c1
339 nmdc:mga0n895_84458_c1
340 nmdc:mga0rr50_22755_c1
341 Ga0495601_0069116
342 Ga0495612_0016414
343 Ga0495595_0027064
344 Ga0466962_0007050
345 Ga0466962_0019735
346 2857485342
347 2512735039
348 2643959601
349 2644032951
350 2644092919
351 2644100558
352 2644116966
353 2644228286
354 2644322532
355 2738869446
356 2740165768
357 2774396025
358 2809197688
359 2812330951
360 2812347842
361 2891968765
362 2916973736
363 2984578667
364 2990259473
365 8054612272
366 8056064687

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00226

DnaJ

DnaJ domain

11

73

0.99

PF01556

DnaJ_C

DnaJ C terminal domain

145

359

0.97

PF00684

DnaJ_CXXCXGXG

DnaJ central domain

172

233

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rzy-assembly2.cif.gz_B plasmodium falciparum pfa0660w hsp40 co-chaperone j-domain 0.9561 6 67
5nro-assembly1.cif.gz_B structure of full-length dnak with bound j-domain 0.9543 6 64
7jtk-assembly1.cif.gz_y radial spoke 1 isolated from chlamydomonas reinhardtii 0.9433 6 69
3apq-assembly2.cif.gz_B crystal structure of j-trx1 fragment of erdj5 0.937 4 74
3i38-assembly7.cif.gz_G structure of a putative chaperone protein dnaj from klebsiella pneumoniae subsp. pneumoniae mgh 78578 0.9353 201 304
ID Description Score Start End Superfamily
af_Q54YH7_8_119_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9883 6 67 1.10.287.110
af_Q8RYC5_16_110_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9881 6 68 1.10.287.110
af_I1NG96_25_126_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9879 6 67 1.10.287.110
af_Q55D57_37_119_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9874 6 68 1.10.287.110
af_D3ZD82_4_109_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9802 5 72 1.10.287.110
ID Description Score Start End GO Terms
AF-A0A6G3VHS8-F1-model_v4 deleted 0.9667 203 282
AF-A0A0D3BCM5-F1-model_v4 J domain-containing protein 0.9616 3 73 GO:0003723
AF-A0A4Y9J712-F1-model_v4 deleted 0.9569 162 286
AF-A0A6G3VHS8-F1-model_v4 deleted 0.9551 203 282
AF-A0A6G7RSU1-F1-model_v4 Chaperone DnaJ C-terminal domain-containing protein 0.948 158 298 GO:0005737
GO:0042026
GO:0051082
GO:0051085

Map