F281116

General Info

Members Datasets Scaffolds Average Seq Length
183 91 366 476

Family's Representative Sequence

Representative Sequence 3300032126|Ga0307415_100014825|Ga0307415_1000148252
Length 522
Sequence MTDPASSTSAVRVRFAPSPTGLLHIGGARTALFNWLLAHGQARREGRAGAFLLRIEDTDRNRYVEGAEQGIVDILRWFGLDWDEGPDVGGPLGPYRQSERTDLYREHAARLLASGHAYRCFCTPERLQQVREEQTARKEAPGYDRFCRDLAAEQVAANLAAGMSSSIRFRMPLSGETRVVDLLRGEIVFQNANLEDLILLKSDGYPTYHLANVVDDHLMAISHILRGEEWIPTAPIHVRLYDAFGWDAPQFAHMPLILAPGGGKLSKRHGSTAMEEFRAQGYLPEALMNYLALLGWSLDGTTEMFSRDDLLETFTLERVNPSPGTFDYNKLRWFNQQYINHVLTLEELTLRVMPFLAEVGLIAPGPFAPDHPDFARLLPVVALLKDRLETLADAPQLMTYFLQPDLEPYDPALLIPKKMTRDDALAALGAVAALLPEVDLANEEATETRFRALADALGLKPGSLFMPVRVAVTGRTQSPGLFETLRVVGAERVGARVAAAIERLRDWTPEEQSVAATTQASV

Samples

Sample ID Description Type Environment
1 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
40 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
41 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
42 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
45 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
49 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
50 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
53 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
54 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
55 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
56 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
57 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
59 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
60 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
61 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
62 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
67 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
68 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
69 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
70 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
71 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
79 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
80 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
81 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
82 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
83 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
84 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
87 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
88 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
89 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
90 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
91 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.91
Metatranscriptomes 1.09
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.73
Rhizosphere 97.27
Stem 0
Stem Tuber 0
Unclassified 3.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307415_100014825 3300032126 Bacteria 4597
2 Ga0070689_100004560 3300005340 Bacteria 9381
3 Ga0070687_100015379 3300005343 Bacteria 3460
4 Ga0070692_10002786 3300005345 Bacteria 6890
5 Ga0070703_10001087 3300005406 Bacteria 8465
6 Ga0070714_100045463 3300005435 Bacteria 3721
7 Ga0070713_100003152 3300005436 Bacteria 10856
8 Ga0070708_100008985 3300005445 Bacteria 8052
9 Ga0070708_100027648 3300005445 Bacteria 4869
10 Ga0070708_100060538 3300005445 Bacteria 3380
11 Ga0070708_100081004 3300005445 Unclassified 2938
12 Ga0070708_100210141 3300005445 Unclassified 1823
13 Ga0070681_10160220 3300005458 Bacteria 2174
14 Ga0070706_100000746 3300005467 Bacteria 36612
15 Ga0070706_100000844 3300005467 Bacteria 33794
16 Ga0070706_100004006 3300005467 Bacteria 14319
17 Ga0070706_100011441 3300005467 Bacteria 8246
18 Ga0070706_100077182 3300005467 Unclassified 3083
19 Ga0070707_100002111 3300005468 Bacteria 19053
20 Ga0070707_100021474 3300005468 Bacteria 6103
21 Ga0070698_100000031 3300005471 Bacteria 95539
22 Ga0070698_100006065 3300005471 Bacteria 13163
23 Ga0070698_100024220 3300005471 Bacteria 6333
24 Ga0070698_100173911 3300005471 Bacteria 2093
25 Ga0070699_100025052 3300005518 Bacteria 5144
26 Ga0070699_100038126 3300005518 Bacteria 4162
27 Ga0070699_100063655 3300005518 Unclassified 3198
28 Ga0070699_100064533 3300005518 Bacteria 3176
29 Ga0070699_100190001 3300005518 Bacteria 1824
30 Ga0070684_100002173 3300005535 Bacteria 14471
31 Ga0070684_100026396 3300005535 Bacteria 4893
32 Ga0070684_100027271 3300005535 Bacteria 4818
33 Ga0070697_100008033 3300005536 Bacteria 8226
34 Ga0070697_100108062 3300005536 Unclassified 2315
35 Ga0070695_100008374 3300005545 Bacteria 6136
36 Ga0070664_100244010 3300005564 Bacteria 1613
37 Ga0068857_100000946 3300005577 Bacteria 22133
38 Ga0068854_100010558 3300005578 Bacteria 5992
39 Ga0068856_100113176 3300005614 Bacteria 2712
40 Ga0081538_10000065 3300005981 Bacteria 98948
41 Ga0081538_10000102 3300005981 Bacteria 83853
42 Ga0081538_10000116 3300005981 Bacteria 80435
43 Ga0081538_10007489 3300005981 Bacteria 9434
44 Ga0070716_100005340 3300006173 Bacteria 6217
45 Ga0075428_100006266 3300006844 Bacteria 13226
46 Ga0075428_100139657 3300006844 Bacteria 2634
47 Ga0075431_100039787 3300006847 Bacteria 4844
48 Ga0075431_100120342 3300006847 Bacteria 2709
49 Ga0075433_10027366 3300006852 Bacteria 4835
50 Ga0075433_10038624 3300006852 Bacteria 4124
51 Ga0075433_10095579 3300006852 Bacteria 2630
52 Ga0075429_100005959 3300006880 Bacteria 10528
53 Ga0075436_100074179 3300006914 Bacteria 2356
54 Ga0075435_100082387 3300007076 Bacteria 2644
55 Ga0105245_10047453 3300009098 Bacteria 3840
56 Ga0114129_10020777 3300009147 Bacteria 9331
57 Ga0114129_10028114 3300009147 Bacteria 7967
58 Ga0114129_10054596 3300009147 Bacteria 5601
59 Ga0114129_10172704 3300009147 Bacteria 2946
60 Ga0114129_10217800 3300009147 Bacteria 2577
61 Ga0207653_10000317 3300025885 Bacteria 26858
62 Ga0207684_10000041 3300025910 Bacteria 262530
63 Ga0207684_10000090 3300025910 Bacteria 171831
64 Ga0207684_10000986 3300025910 Bacteria 31968
65 Ga0207684_10010220 3300025910 Bacteria 8262
66 Ga0207684_10024116 3300025910 Bacteria 5189
67 Ga0207684_10062196 3300025910 Bacteria 3170
68 Ga0207684_10103180 3300025910 Bacteria 2438
69 Ga0207662_10014572 3300025918 Bacteria 4413
70 Ga0207662_10033030 3300025918 Bacteria 3014
71 Ga0207646_10000004 3300025922 Bacteria 529176
72 Ga0207646_10000705 3300025922 Bacteria 43354
73 Ga0207646_10003370 3300025922 Bacteria 18099
74 Ga0207646_10006756 3300025922 Bacteria 11808
75 Ga0207646_10029492 3300025922 Bacteria 4985
76 Ga0207646_10061446 3300025922 Bacteria 3353
77 Ga0207646_10063333 3300025922 Unclassified 3302
78 Ga0207700_10017712 3300025928 Bacteria 4765
79 Ga0207665_10002135 3300025939 Bacteria 13371
80 Ga0207708_10006423 3300026075 Bacteria 8709
81 Ga0207674_10000334 3300026116 Bacteria 60268
82 Ga0207674_10099647 3300026116 Bacteria 2888
83 Ga0265319_1006407 3300028563 Bacteria 5457
84 Ga0265318_10002599 3300028577 Bacteria 9555
85 Ga0265323_10011197 3300028653 Bacteria 3621
86 Ga0265323_10025918 3300028653 Bacteria 2213
87 Ga0265322_10003250 3300028654 Bacteria 4930
88 Ga0265338_10004093 3300028800 Bacteria 19971
89 Ga0265324_10000203 3300029957 Bacteria 45335
90 Ga0265330_10037153 3300031235 Bacteria 2169
91 Ga0265327_10011179 3300031251 Bacteria 6218
92 Ga0265316_10009542 3300031344 Bacteria 8922
93 Ga0265316_10020973 3300031344 Bacteria 5546
94 Ga0265316_10023058 3300031344 Bacteria 5234
95 Ga0265313_10020290 3300031595 Bacteria 3669
96 Ga0316575_10012602 3300031665 Bacteria 3148
97 Ga0316579_10004781 3300031691 Bacteria 5411
98 Ga0316579_10009169 3300031691 Bacteria 4154
99 Ga0316576_10002646 3300031727 Bacteria 10224
100 Ga0316576_10048818 3300031727 Bacteria 3071
101 Ga0316576_10162353 3300031727 Bacteria 1685
102 Ga0316578_10013943 3300031728 Bacteria 4275
103 Ga0316578_10020390 3300031728 Bacteria 3662
104 Ga0316578_10025594 3300031728 Bacteria 3319
105 Ga0316577_10002145 3300031733 Bacteria 9653
106 Ga0316577_10004265 3300031733 Bacteria 7356
107 Ga0316577_10017782 3300031733 Bacteria 3929
108 Ga0316577_10018118 3300031733 Bacteria 3892
109 Ga0316577_10031615 3300031733 Bacteria 2957
110 Ga0316577_10038471 3300031733 Bacteria 2676
111 Ga0316583_10011634 3300032133 Bacteria 3173
112 Ga0316585_10000775 3300032137 Bacteria 8067
113 Ga0316580_10000523 3300032139 Bacteria 8884
114 Ga0316596_1004653 3300033541 Bacteria 3094
115 Ga0316596_1007740 3300033541 Bacteria 2545
116 Ga0316574_0007850 3300035398 Bacteria 5882
117 Ga0316574_0073653 3300035398 Bacteria 2160
118 Ga0316574_0079537 3300035398 Bacteria 2079
119 Ga0373937_0054555 3300036401 Bacteria 3668
120 Ga0373937_0067634 3300036401 Bacteria 3292
121 Ga0316582_0000518 3300036647 Bacteria 14600
122 Ga0316582_0004839 3300036647 Bacteria 6868
123 Ga0316582_0066021 3300036647 Bacteria 2331
124 Ga0316582_0070018 3300036647 Bacteria 2269
125 Ga0316582_0112089 3300036647 Bacteria 1817
126 Ga0316582_0153641 3300036647 Bacteria 1557
127 Ga0316584_0001897 3300036712 Bacteria 13001
128 Ga0316584_0003229 3300036712 Bacteria 10548
129 Ga0316584_0008515 3300036712 Bacteria 7068
130 Ga0316584_0028039 3300036712 Bacteria 4149
131 Ga0316584_0041367 3300036712 Bacteria 3435
132 Ga0316584_0041936 3300036712 Bacteria 3412
133 Ga0316584_0051128 3300036712 Bacteria 3091
134 Ga0316584_0072188 3300036712 Bacteria 2587
135 Ga0316584_0099372 3300036712 Bacteria 2179
136 Ga0316581_0005488 3300037588 Bacteria 3309
137 Ga0316581_0011703 3300037588 Bacteria 2458
138 Ga0395901_0025388 3300038443 Bacteria 6083
139 Ga0453684_0000190 3300044712 Bacteria 269203
140 Ga0453684_0002767 3300044712 Bacteria 41505
141 Ga0453684_0014320 3300044712 Bacteria 12709
142 Ga0451576_0066065 3300045051 Bacteria 3766
143 Ga0495651_0053517 3300046462 Bacteria 3107
144 Ga0495657_0139830 3300046675 Bacteria 1510
145 Ga0495674_0039600 3300047319 Bacteria 4223
146 Ga0496110_0091390 3300048913 Bacteria 2723
147 Ga0496110_0148256 3300048913 Bacteria 2123
148 Ga0496111_0069179 3300048914 Bacteria 2567
149 Ga0496112_0039479 3300048915 Bacteria 4614
150 Ga0496112_0101951 3300048915 Bacteria 2840
151 Ga0501034_0039599 3300049571 Bacteria 4774
152 Ga0501038_0035993 3300049574 Bacteria 4344
153 Ga0501040_0000469 3300049576 Bacteria 24011
154 Ga0501040_0110670 3300049576 Bacteria 1921
155 Ga0501042_0004281 3300049578 Bacteria 9091
156 Ga0501042_0010810 3300049578 Bacteria 6136
157 Ga0501046_0000123 3300049580 Bacteria 82426
158 Ga0501071_0003429 3300049587 Bacteria 9903
159 Ga0501072_0000748 3300049588 Bacteria 23743
160 Ga0501072_0004756 3300049588 Bacteria 10337
161 Ga0501072_0104514 3300049588 Bacteria 2252
162 Ga0501074_0002604 3300049590 Bacteria 12613
163 Ga0501075_0001421 3300049591 Bacteria 15569
164 Ga0501075_0013435 3300049591 Bacteria 5842
165 Ga0501076_0001113 3300049592 Bacteria 17720
166 Ga0501076_0016713 3300049592 Bacteria 5566
167 Ga0501079_0128200 3300049741 Bacteria 1974
168 Ga0501080_0050743 3300049742 Bacteria 3861
169 Ga0501080_0153683 3300049742 Bacteria 2126
170 Ga0501081_0001670 3300049743 Bacteria 13730
171 Ga0501081_0125643 3300049743 Bacteria 1829
172 Ga0501044_0082698 3300049823 Bacteria 3248
173 nmdc:mga05p37_34474_c1 3300050507 Bacteria 6201
174 nmdc:mga05p37_62474_c2 3300050507 Bacteria 4292
175 nmdc:mga06r32_110005_c1 3300050510 Bacteria 2710
176 nmdc:mga06r32_9326_c1 3300050510 Bacteria 8848
177 nmdc:mga08x19_18813_c1 3300050514 Bacteria 4234
178 nmdc:mga08x19_62533_c1 3300050514 Bacteria 2414
179 nmdc:mga0a205_15886_c1 3300050515 Bacteria 7042
180 nmdc:mga0a205_87168_c1 3300050515 Bacteria 3016
181 Ga0501084_0005443 3300054114 Bacteria 10441
182 Ga0530510_0001652 3300061734 Bacteria 15080
183 Ga0530510_0009368 3300061734 Bacteria 6866
184 Ga0307415_100014825
185 Ga0070689_100004560
186 Ga0070687_100015379
187 Ga0070692_10002786
188 Ga0070703_10001087
189 Ga0070714_100045463
190 Ga0070713_100003152
191 Ga0070708_100008985
192 Ga0070708_100027648
193 Ga0070708_100060538
194 Ga0070708_100081004
195 Ga0070708_100210141
196 Ga0070681_10160220
197 Ga0070706_100000746
198 Ga0070706_100000844
199 Ga0070706_100004006
200 Ga0070706_100011441
201 Ga0070706_100077182
202 Ga0070707_100002111
203 Ga0070707_100021474
204 Ga0070698_100000031
205 Ga0070698_100006065
206 Ga0070698_100024220
207 Ga0070698_100173911
208 Ga0070699_100025052
209 Ga0070699_100038126
210 Ga0070699_100063655
211 Ga0070699_100064533
212 Ga0070699_100190001
213 Ga0070684_100002173
214 Ga0070684_100026396
215 Ga0070684_100027271
216 Ga0070697_100008033
217 Ga0070697_100108062
218 Ga0070695_100008374
219 Ga0070664_100244010
220 Ga0068857_100000946
221 Ga0068854_100010558
222 Ga0068856_100113176
223 Ga0081538_10000065
224 Ga0081538_10000102
225 Ga0081538_10000116
226 Ga0081538_10007489
227 Ga0070716_100005340
228 Ga0075428_100006266
229 Ga0075428_100139657
230 Ga0075431_100039787
231 Ga0075431_100120342
232 Ga0075433_10027366
233 Ga0075433_10038624
234 Ga0075433_10095579
235 Ga0075429_100005959
236 Ga0075436_100074179
237 Ga0075435_100082387
238 Ga0105245_10047453
239 Ga0114129_10020777
240 Ga0114129_10028114
241 Ga0114129_10054596
242 Ga0114129_10172704
243 Ga0114129_10217800
244 Ga0207653_10000317
245 Ga0207684_10000041
246 Ga0207684_10000090
247 Ga0207684_10000986
248 Ga0207684_10010220
249 Ga0207684_10024116
250 Ga0207684_10062196
251 Ga0207684_10103180
252 Ga0207662_10014572
253 Ga0207662_10033030
254 Ga0207646_10000004
255 Ga0207646_10000705
256 Ga0207646_10003370
257 Ga0207646_10006756
258 Ga0207646_10029492
259 Ga0207646_10061446
260 Ga0207646_10063333
261 Ga0207700_10017712
262 Ga0207665_10002135
263 Ga0207708_10006423
264 Ga0207674_10000334
265 Ga0207674_10099647
266 Ga0265319_1006407
267 Ga0265318_10002599
268 Ga0265323_10011197
269 Ga0265323_10025918
270 Ga0265322_10003250
271 Ga0265338_10004093
272 Ga0265324_10000203
273 Ga0265330_10037153
274 Ga0265327_10011179
275 Ga0265316_10009542
276 Ga0265316_10020973
277 Ga0265316_10023058
278 Ga0265313_10020290
279 Ga0316575_10012602
280 Ga0316579_10004781
281 Ga0316579_10009169
282 Ga0316576_10002646
283 Ga0316576_10048818
284 Ga0316576_10162353
285 Ga0316578_10013943
286 Ga0316578_10020390
287 Ga0316578_10025594
288 Ga0316577_10002145
289 Ga0316577_10004265
290 Ga0316577_10017782
291 Ga0316577_10018118
292 Ga0316577_10031615
293 Ga0316577_10038471
294 Ga0316583_10011634
295 Ga0316585_10000775
296 Ga0316580_10000523
297 Ga0316596_1004653
298 Ga0316596_1007740
299 Ga0316574_0007850
300 Ga0316574_0073653
301 Ga0316574_0079537
302 Ga0373937_0054555
303 Ga0373937_0067634
304 Ga0316582_0000518
305 Ga0316582_0004839
306 Ga0316582_0066021
307 Ga0316582_0070018
308 Ga0316582_0112089
309 Ga0316582_0153641
310 Ga0316584_0001897
311 Ga0316584_0003229
312 Ga0316584_0008515
313 Ga0316584_0028039
314 Ga0316584_0041367
315 Ga0316584_0041936
316 Ga0316584_0051128
317 Ga0316584_0072188
318 Ga0316584_0099372
319 Ga0316581_0005488
320 Ga0316581_0011703
321 Ga0395901_0025388
322 Ga0453684_0000190
323 Ga0453684_0002767
324 Ga0453684_0014320
325 Ga0451576_0066065
326 Ga0495651_0053517
327 Ga0495657_0139830
328 Ga0495674_0039600
329 Ga0496110_0091390
330 Ga0496110_0148256
331 Ga0496111_0069179
332 Ga0496112_0039479
333 Ga0496112_0101951
334 Ga0501034_0039599
335 Ga0501038_0035993
336 Ga0501040_0000469
337 Ga0501040_0110670
338 Ga0501042_0004281
339 Ga0501042_0010810
340 Ga0501046_0000123
341 Ga0501071_0003429
342 Ga0501072_0000748
343 Ga0501072_0004756
344 Ga0501072_0104514
345 Ga0501074_0002604
346 Ga0501075_0001421
347 Ga0501075_0013435
348 Ga0501076_0001113
349 Ga0501076_0016713
350 Ga0501079_0128200
351 Ga0501080_0050743
352 Ga0501080_0153683
353 Ga0501081_0001670
354 Ga0501081_0125643
355 Ga0501044_0082698
356 nmdc:mga05p37_34474_c1
357 nmdc:mga05p37_62474_c2
358 nmdc:mga06r32_110005_c1
359 nmdc:mga06r32_9326_c1
360 nmdc:mga08x19_18813_c1
361 nmdc:mga08x19_62533_c1
362 nmdc:mga0a205_15886_c1
363 nmdc:mga0a205_87168_c1
364 Ga0501084_0005443
365 Ga0530510_0001652
366 Ga0530510_0009368

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

10

333

0.97

PF19269

Anticodon_2

Anticodon binding domain

347

501

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1g59-assembly1.cif.gz_A glutamyl-trna synthetase complexed with trna(glu). 0.8584 6 476
1g59-assembly1.cif.gz_A glutamyl-trna synthetase complexed with trna(glu). 0.8516 6 476
2cv1-assembly1.cif.gz_A glutamyl-trna synthetase from thermus thermophilus in complex with trna(glu), atp, and an analog of l-glutamate: a quaternary complex 0.8513 6 476
4gri-assembly2.cif.gz_B crystal structure of a glutamyl-trna synthetase glurs from borrelia burgdorferi bound to glutamic acid and zinc 0.8471 5 476
2cv1-assembly1.cif.gz_A glutamyl-trna synthetase from thermus thermophilus in complex with trna(glu), atp, and an analog of l-glutamate: a quaternary complex 0.8445 6 476
ID Description Score Start End Superfamily
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9497 6 254 3.40.50.620
5tgtA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9477 5 341 3.40.50.620
5tgtA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9415 5 341 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9346 6 254 3.40.50.620
1g59A02 Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 0.9034 258 340 1.10.1160.10
ID Description Score Start End GO Terms
AF-A0A7T5RQB6-F1-model_v4 Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS) 0.9508 6 476 GO:0000049
GO:0004818
GO:0005524
GO:0005737
GO:0006424
GO:0008270
AF-A0A2N1QN43-F1-model_v4 Glutamate--tRNA ligase 0.9427 1 243 GO:0004818
GO:0005524
GO:0005829
GO:0006424
GO:0008270
AF-A0A7T5RQB6-F1-model_v4 Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS) 0.9418 6 476 GO:0000049
GO:0004818
GO:0005524
GO:0005737
GO:0006424
GO:0008270
AF-A0A2N1QN43-F1-model_v4 Glutamate--tRNA ligase 0.938 1 243 GO:0004818
GO:0005524
GO:0005829
GO:0006424
GO:0008270
AF-A0A7C1DT72-F1-model_v4 Glutamate--tRNA ligase 0.9334 2 340 GO:0004818
GO:0005524
GO:0005829
GO:0006424
GO:0008270

Map