F280541

General Info

Members Datasets Scaffolds Average Seq Length
183 127 366 566

Family's Representative Sequence

Representative Sequence 3300005564|Ga0070664_100006095|Ga0070664_1000060953
Length 582
Sequence VTIATDLGPAQRAKALAAMAATAEPGGTPLDVLVVGAGVVGTGVALDAVSRGLSTALLEQRDYGSGTSSRSSKLVHGGLRYLEMLDFALVREALQERGLLLTRLAPHLVRPVPFLYPLHHSWERPYVGAGVALYDAMAMVGGRAGRRGAGVPKHKHLFRKQVARMAPDLRTEELAGAIRYYDCQVDDARLVVTIARTAASYGAHLASRAKVTGFVREGNRVVGVRARDLENDVDLEIRARVVINAAGVWTDEIQEMVGGEGALHVEASKGIHLVVPRDRIRSETGFITKTERSVLFVIPWGRHWIIGTTDTPWTLDLAHPAASKADIDYVLGHVNKLLRTPLDHDDVEGVYAGLRPLLKGEVEATSKISREHTTVAPVPGLVLIAGGKLTTYRVMARDAVDMAARTLRRTVGEPGPSITDRVPLLGAQGFETRTNQRVALARETGLDIGWIDHLLGRYGGLVDEILPLLLDRPELAEPLVHAPDYLCGEIVYAATHEGARHLDDVLTRRTRISIETFDRGVQCARQVAELMGSVLAWDATRVDEEVDHYLRRVEAERQSQEKLTDQEADEARVQAPEGPWAV

Samples

Sample ID Description Type Environment
1 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
58 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
59 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
60 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
64 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
70 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
71 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
72 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
73 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
74 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
75 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
76 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
77 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
78 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
79 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
80 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
81 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
95 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
96 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
97 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
98 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
99 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
100 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
101 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
104 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
108 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
109 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
110 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
111 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
112 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
113 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
114 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
115 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
116 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
117 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
118 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
119 2643221561 Nocardioides sp. Root151 Isolate Unclassified
120 2643221615 Nocardioides sp. Root224 Isolate Unclassified
121 2643221641 Nocardioides sp. Root122 Isolate Unclassified
122 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
123 2643221696 Nocardioides sp. Root140 Isolate Unclassified
124 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
125 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
126 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
127 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.08
Metatranscriptomes 0
Isolates 4.92

Biome Distribution

Category Percentage (%)
Aerial Root 1.09
Bulb 0
Endosphere 12.57
Nodule 0.55
Rhizoplane 11.48
Rhizosphere 71.04
Stem 0
Stem Tuber 0
Unclassified 0.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070664_100006095 3300005564 Bacteria 9749
2 Ga0070658_10095231 3300005327 Bacteria 2457
3 Ga0070683_100049363 3300005329 Bacteria 3892
4 Ga0070683_100084481 3300005329 Bacteria 2974
5 Ga0070670_100013987 3300005331 Bacteria 6881
6 Ga0070680_100171279 3300005336 Bacteria 1827
7 Ga0070660_100077901 3300005339 Bacteria 2599
8 Ga0070691_10047233 3300005341 Bacteria 2047
9 Ga0070659_100017694 3300005366 Bacteria 5367
10 Ga0070659_100114434 3300005366 Bacteria 2179
11 Ga0070714_100019587 3300005435 Bacteria 5517
12 Ga0070711_100067612 3300005439 Bacteria 2508
13 Ga0070700_100000290 3300005441 Bacteria 26415
14 Ga0070698_100001704 3300005471 Bacteria 24513
15 Ga0070679_100052612 3300005530 Bacteria 4055
16 Ga0070684_100019773 3300005535 Bacteria 5576
17 Ga0070665_100000450 3300005548 Bacteria 59867
18 Ga0068857_100018384 3300005577 Bacteria 6132
19 Ga0068856_100020737 3300005614 Bacteria 6385
20 Ga0068852_100014906 3300005616 Bacteria 6007
21 Ga0068861_100028386 3300005719 Bacteria 4082
22 Ga0068870_10005145 3300005840 Bacteria 5690
23 Ga0068860_100001548 3300005843 Bacteria 24782
24 Ga0075365_10005340 3300006038 Bacteria 6919
25 Ga0075365_10016012 3300006038 Bacteria 4548
26 Ga0075365_10017760 3300006038 Bacteria 4360
27 Ga0075365_10019763 3300006038 Bacteria 4164
28 Ga0075365_10036786 3300006038 Bacteria 3174
29 Ga0075365_10059411 3300006038 Bacteria 2548
30 Ga0075368_10019567 3300006042 Bacteria 2556
31 Ga0075363_100015541 3300006048 Bacteria 3744
32 Ga0075363_100016752 3300006048 Bacteria 3624
33 Ga0075363_100020969 3300006048 Bacteria 3283
34 Ga0075370_10004341 3300006353 Bacteria 6873
35 Ga0075370_10004447 3300006353 Bacteria 6810
36 Ga0075434_100054034 3300006871 Bacteria 3990
37 Ga0068865_100031369 3300006881 Bacteria 3544
38 Ga0111539_10040701 3300009094 Bacteria 5592
39 Ga0111539_10276537 3300009094 Bacteria 1954
40 Ga0105245_10000359 3300009098 Bacteria 42584
41 Ga0105243_10002771 3300009148 Bacteria 14575
42 Ga0105243_10066385 3300009148 Bacteria 2901
43 Ga0105242_10101944 3300009176 Bacteria 2434
44 Ga0105238_10107764 3300009551 Bacteria 2767
45 Ga0105249_10009259 3300009553 Bacteria 8611
46 Ga0105239_10003153 3300010375 Bacteria 20449
47 Ga0105239_10008340 3300010375 Bacteria 11808
48 Ga0105246_10038901 3300011119 Bacteria 3201
49 Ga0163162_10043116 3300013306 Bacteria 4517
50 Ga0182008_10015499 3300014497 Bacteria 3976
51 Ga0163161_10039456 3300017792 Bacteria 3390
52 Ga0207688_10013617 3300025901 Bacteria 4421
53 Ga0207643_10017444 3300025908 Bacteria 3925
54 Ga0207705_10083869 3300025909 Bacteria 2326
55 Ga0207657_10058543 3300025919 Bacteria 3315
56 Ga0207687_10008298 3300025927 Bacteria 6796
57 Ga0207690_10063526 3300025932 Bacteria 2518
58 Ga0207706_10049671 3300025933 Bacteria 3706
59 Ga0207661_10052351 3300025944 Bacteria 3261
60 Ga0207708_10000344 3300026075 Bacteria 36621
61 Ga0207708_10020798 3300026075 Bacteria 4950
62 Ga0207648_10011927 3300026089 Bacteria 8161
63 Ga0207674_10008213 3300026116 Bacteria 12098
64 Ga0207674_10019709 3300026116 Bacteria 7302
65 Ga0207675_100000374 3300026118 Bacteria 42984
66 Ga0207675_100082698 3300026118 Bacteria 3011
67 Ga0268266_10002498 3300028379 Bacteria 19619
68 Ga0373956_0001514 3300035119 Bacteria 9600
69 Ga0373937_0004119 3300036401 Bacteria 12332
70 Ga0395900_0032805 3300037418 Bacteria 5342
71 Ga0395898_0089365 3300037466 Bacteria 2964
72 Ga0395901_0110912 3300038443 Bacteria 2881
73 Ga0395901_0242181 3300038443 Bacteria 1881
74 Ga0439446_0000519 3300042156 Bacteria 7734
75 Ga0451577_0060321 3300042876 Unclassified 3382
76 Ga0466966_0037383 3300044684 Bacteria 3131
77 Ga0466961_0028339 3300044693 Bacteria 3600
78 Ga0466963_0021992 3300044694 Bacteria 4033
79 Ga0453684_0000053 3300044712 Bacteria 545350
80 Ga0453684_0093892 3300044712 Bacteria 3693
81 Ga0466971_0034245 3300044719 Bacteria 2276
82 Ga0466960_0002292 3300044901 Bacteria 7170
83 Ga0466960_0013630 3300044901 Bacteria 3459
84 Ga0466959_0023106 3300045049 Bacteria 4599
85 Ga0466958_0007444 3300045836 Bacteria 6024
86 Ga0466967_0029564 3300045976 Bacteria 4588
87 Ga0466967_0039889 3300045976 Bacteria 4040
88 Ga0466967_0045876 3300045976 Bacteria 3801
89 Ga0466967_0047274 3300045976 Bacteria 3751
90 Ga0466967_0114850 3300045976 Bacteria 2478
91 Ga0466967_0280919 3300045976 Bacteria 1597
92 Ga0495603_0054623 3300046455 Bacteria 2367
93 Ga0495593_0051758 3300047673 Bacteria 2172
94 Ga0495614_0021080 3300048089 Bacteria 2817
95 Ga0496101_0075687 3300048904 Bacteria 2478
96 Ga0496102_0022638 3300048905 Bacteria 5569
97 Ga0496102_0033439 3300048905 Bacteria 4621
98 Ga0496102_0054724 3300048905 Bacteria 3639
99 Ga0496104_0018176 3300048907 Bacteria 6412
100 Ga0496105_0004182 3300048908 Bacteria 10841
101 Ga0496105_0094642 3300048908 Bacteria 2467
102 Ga0496107_0019144 3300048910 Bacteria 4829
103 Ga0496108_0000157 3300048911 Bacteria 64803
104 Ga0496108_0046123 3300048911 Bacteria 3641
105 Ga0496109_0022391 3300048912 Bacteria 5596
106 Ga0496109_0142030 3300048912 Bacteria 2245
107 Ga0496109_0234621 3300048912 Bacteria 1726
108 Ga0496110_0011276 3300048913 Bacteria 7306
109 Ga0496110_0070392 3300048913 Bacteria 3099
110 Ga0496110_0131292 3300048913 Bacteria 2262
111 Ga0496113_0056941 3300048916 Bacteria 2936
112 Ga0496114_0043869 3300048917 Bacteria 3708
113 Ga0496114_0050378 3300048917 Bacteria 3466
114 Ga0496115_0075404 3300048918 Bacteria 2740
115 Ga0496115_0136371 3300048918 Bacteria 2023
116 Ga0501031_0084282 3300049568 Bacteria 2072
117 Ga0501032_0022823 3300049569 Bacteria 4334
118 Ga0501033_0004496 3300049570 Bacteria 11159
119 Ga0501033_0051443 3300049570 Bacteria 3054
120 Ga0501034_0009143 3300049571 Bacteria 10400
121 Ga0501034_0041470 3300049571 Bacteria 4657
122 Ga0501036_0004852 3300049572 Bacteria 10869
123 Ga0501036_0025717 3300049572 Bacteria 4968
124 Ga0501038_0004321 3300049574 Bacteria 13213
125 Ga0501038_0124131 3300049574 Bacteria 2126
126 Ga0501039_0002881 3300049575 Bacteria 12871
127 Ga0501040_0013621 3300049576 Bacteria 5348
128 Ga0501041_0048654 3300049577 Bacteria 2583
129 Ga0501042_0002779 3300049578 Bacteria 10817
130 Ga0501042_0049290 3300049578 Bacteria 3004
131 Ga0501046_0002324 3300049580 Bacteria 17916
132 Ga0501046_0002624 3300049580 Bacteria 16790
133 Ga0501048_0006394 3300049582 Bacteria 8956
134 Ga0501048_0023119 3300049582 Bacteria 4544
135 Ga0501067_0001216 3300049583 Bacteria 13989
136 Ga0501067_0004458 3300049583 Bacteria 7722
137 Ga0501067_0015978 3300049583 Bacteria 4152
138 Ga0501067_0028777 3300049583 Bacteria 3080
139 Ga0501068_0015607 3300049584 Bacteria 4365
140 Ga0501068_0078825 3300049584 Bacteria 2019
141 Ga0501071_0002145 3300049587 Bacteria 11856
142 Ga0501071_0007701 3300049587 Bacteria 7097
143 Ga0501071_0112804 3300049587 Bacteria 2010
144 Ga0501073_0009074 3300049589 Bacteria 7340
145 Ga0501074_0000665 3300049590 Bacteria 21423
146 Ga0501074_0066323 3300049590 Bacteria 2596
147 Ga0501074_0077367 3300049590 Bacteria 2387
148 Ga0501075_0007978 3300049591 Bacteria 7357
149 Ga0501076_0021673 3300049592 Bacteria 4931
150 Ga0501076_0023628 3300049592 Bacteria 4742
151 Ga0501079_0006349 3300049741 Bacteria 8874
152 Ga0501080_0025739 3300049742 Bacteria 5465
153 Ga0501080_0163675 3300049742 Bacteria 2054
154 Ga0501081_0050849 3300049743 Bacteria 2856
155 Ga0501081_0113510 3300049743 Bacteria 1924
156 Ga0501083_0034089 3300049744 Bacteria 3482
157 Ga0501035_0002390 3300049822 Bacteria 18423
158 Ga0501035_0018526 3300049822 Bacteria 6413
159 Ga0501044_0003184 3300049823 Bacteria 18524
160 Ga0501045_0015486 3300049824 Bacteria 5410
161 nmdc:mga03n38_31196_c1 3300050490 Bacteria 2247
162 nmdc:mga00v17_15740_c1 3300050491 Bacteria 4251
163 nmdc:mga00v17_15956_c1 3300050491 Bacteria 3801
164 nmdc:mga0yw44_20811_c1 3300050492 Bacteria 2526
165 nmdc:mga0yw44_4089_c1 3300050492 Bacteria 6613
166 nmdc:mga0yw44_5093_c1 3300050492 Bacteria 6146
167 nmdc:mga06z11_3951_c1 3300050494 Bacteria 5780
168 nmdc:mga07m45_7114_c1 3300050496 Bacteria 5699
169 nmdc:mga0n895_86660_c1 3300050512 Bacteria 3128
170 Ga0500644_0000561 3300053088 Bacteria 14692
171 Ga0500556_0001293 3300053104 Bacteria 11303
172 Ga0500593_000889 3300053117 Bacteria 11097
173 Ga0501082_0119120 3300060353 Bacteria 2287
174 Ga0530510_0031864 3300061734 Bacteria 3791
175 2643824152 2643221561 Bacteria 4984412
176 2644091597 2643221615 Bacteria 5487866
177 2644229246 2643221641 Bacteria 4490190
178 2644321400 2643221657 Bacteria 5490246
179 2644533458 2643221696 Bacteria 5431823
180 2855390049 2855386786 Bacteria 4752232
181 2984577360 2984576629 Bacteria 4248407
182 2990259521 2990256926 Bacteria 4252839
183 8054613833 8054609563 Bacteria 5170090
184 Ga0070664_100006095
185 Ga0070658_10095231
186 Ga0070683_100049363
187 Ga0070683_100084481
188 Ga0070670_100013987
189 Ga0070680_100171279
190 Ga0070660_100077901
191 Ga0070691_10047233
192 Ga0070659_100017694
193 Ga0070659_100114434
194 Ga0070714_100019587
195 Ga0070711_100067612
196 Ga0070700_100000290
197 Ga0070698_100001704
198 Ga0070679_100052612
199 Ga0070684_100019773
200 Ga0070665_100000450
201 Ga0068857_100018384
202 Ga0068856_100020737
203 Ga0068852_100014906
204 Ga0068861_100028386
205 Ga0068870_10005145
206 Ga0068860_100001548
207 Ga0075365_10005340
208 Ga0075365_10016012
209 Ga0075365_10017760
210 Ga0075365_10019763
211 Ga0075365_10036786
212 Ga0075365_10059411
213 Ga0075368_10019567
214 Ga0075363_100015541
215 Ga0075363_100016752
216 Ga0075363_100020969
217 Ga0075370_10004341
218 Ga0075370_10004447
219 Ga0075434_100054034
220 Ga0068865_100031369
221 Ga0111539_10040701
222 Ga0111539_10276537
223 Ga0105245_10000359
224 Ga0105243_10002771
225 Ga0105243_10066385
226 Ga0105242_10101944
227 Ga0105238_10107764
228 Ga0105249_10009259
229 Ga0105239_10003153
230 Ga0105239_10008340
231 Ga0105246_10038901
232 Ga0163162_10043116
233 Ga0182008_10015499
234 Ga0163161_10039456
235 Ga0207688_10013617
236 Ga0207643_10017444
237 Ga0207705_10083869
238 Ga0207657_10058543
239 Ga0207687_10008298
240 Ga0207690_10063526
241 Ga0207706_10049671
242 Ga0207661_10052351
243 Ga0207708_10000344
244 Ga0207708_10020798
245 Ga0207648_10011927
246 Ga0207674_10008213
247 Ga0207674_10019709
248 Ga0207675_100000374
249 Ga0207675_100082698
250 Ga0268266_10002498
251 Ga0373956_0001514
252 Ga0373937_0004119
253 Ga0395900_0032805
254 Ga0395898_0089365
255 Ga0395901_0110912
256 Ga0395901_0242181
257 Ga0439446_0000519
258 Ga0451577_0060321
259 Ga0466966_0037383
260 Ga0466961_0028339
261 Ga0466963_0021992
262 Ga0453684_0000053
263 Ga0453684_0093892
264 Ga0466971_0034245
265 Ga0466960_0002292
266 Ga0466960_0013630
267 Ga0466959_0023106
268 Ga0466958_0007444
269 Ga0466967_0029564
270 Ga0466967_0039889
271 Ga0466967_0045876
272 Ga0466967_0047274
273 Ga0466967_0114850
274 Ga0466967_0280919
275 Ga0495603_0054623
276 Ga0495593_0051758
277 Ga0495614_0021080
278 Ga0496101_0075687
279 Ga0496102_0022638
280 Ga0496102_0033439
281 Ga0496102_0054724
282 Ga0496104_0018176
283 Ga0496105_0004182
284 Ga0496105_0094642
285 Ga0496107_0019144
286 Ga0496108_0000157
287 Ga0496108_0046123
288 Ga0496109_0022391
289 Ga0496109_0142030
290 Ga0496109_0234621
291 Ga0496110_0011276
292 Ga0496110_0070392
293 Ga0496110_0131292
294 Ga0496113_0056941
295 Ga0496114_0043869
296 Ga0496114_0050378
297 Ga0496115_0075404
298 Ga0496115_0136371
299 Ga0501031_0084282
300 Ga0501032_0022823
301 Ga0501033_0004496
302 Ga0501033_0051443
303 Ga0501034_0009143
304 Ga0501034_0041470
305 Ga0501036_0004852
306 Ga0501036_0025717
307 Ga0501038_0004321
308 Ga0501038_0124131
309 Ga0501039_0002881
310 Ga0501040_0013621
311 Ga0501041_0048654
312 Ga0501042_0002779
313 Ga0501042_0049290
314 Ga0501046_0002324
315 Ga0501046_0002624
316 Ga0501048_0006394
317 Ga0501048_0023119
318 Ga0501067_0001216
319 Ga0501067_0004458
320 Ga0501067_0015978
321 Ga0501067_0028777
322 Ga0501068_0015607
323 Ga0501068_0078825
324 Ga0501071_0002145
325 Ga0501071_0007701
326 Ga0501071_0112804
327 Ga0501073_0009074
328 Ga0501074_0000665
329 Ga0501074_0066323
330 Ga0501074_0077367
331 Ga0501075_0007978
332 Ga0501076_0021673
333 Ga0501076_0023628
334 Ga0501079_0006349
335 Ga0501080_0025739
336 Ga0501080_0163675
337 Ga0501081_0050849
338 Ga0501081_0113510
339 Ga0501083_0034089
340 Ga0501035_0002390
341 Ga0501035_0018526
342 Ga0501044_0003184
343 Ga0501045_0015486
344 nmdc:mga03n38_31196_c1
345 nmdc:mga00v17_15740_c1
346 nmdc:mga00v17_15956_c1
347 nmdc:mga0yw44_20811_c1
348 nmdc:mga0yw44_4089_c1
349 nmdc:mga0yw44_5093_c1
350 nmdc:mga06z11_3951_c1
351 nmdc:mga07m45_7114_c1
352 nmdc:mga0n895_86660_c1
353 Ga0500644_0000561
354 Ga0500556_0001293
355 Ga0500593_000889
356 Ga0501082_0119120
357 Ga0530510_0031864
358 2643824152
359 2644091597
360 2644229246
361 2644321400
362 2644533458
363 2855390049
364 2984577360
365 2990259521
366 8054613833

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16901

DAO_C

C-terminal domain of alpha-glycerophosphate oxidase

417

542

0.95

PF01494

FAD_binding_3

FAD binding domain

29

325

0.81

PF01266

DAO

FAD dependent oxidoreductase

31

402

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3da1-assembly1.cif.gz_A x-ray structure of the glycerol-3-phosphate dehydrogenase from bacillus halodurans complexed with fad. northeast structural genomics consortium target bhr167. 0.8889 1 548
2rgh-assembly1.cif.gz_A structure of alpha-glycerophosphate oxidase from streptococcus sp.: a template for the mitochondrial alpha-glycerophosphate dehydrogenase 0.8888 7 561
2rgo-assembly1.cif.gz_A structure of alpha-glycerophosphate oxidase from streptococcus sp.: a template for the mitochondrial alpha-glycerophosphate dehydrogenase 0.8766 7 549
2rgo-assembly1.cif.gz_B-2 structure of alpha-glycerophosphate oxidase from streptococcus sp.: a template for the mitochondrial alpha-glycerophosphate dehydrogenase 0.8749 7 550
2rgh-assembly1.cif.gz_A structure of alpha-glycerophosphate oxidase from streptococcus sp.: a template for the mitochondrial alpha-glycerophosphate dehydrogenase 0.8747 7 561
ID Description Score Start End Superfamily
af_A4HYM4_652_790_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.9295 493 549 1.10.8.870
af_Q4DG35_95_220_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.9188 438 550 1.10.8.870
af_Q9SS48_494_621_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.9187 441 548 1.10.8.870
af_O97245_528_652_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.8865 432 550 1.10.8.870
3da1A02 Alpha Beta;2-Layer Sandwich;D-Amino Acid Oxidase; Chain A, domain 2;D-Amino Acid Oxidase, subunit A, domain 2 0.8663 262 351 3.30.9.10
ID Description Score Start End GO Terms
AF-A0A2S8MM93-F1-model_v4 deleted 0.9777 189 335
AF-A0A2V2Q9A5-F1-model_v4 deleted 0.9756 30 571
AF-A0A655A697-F1-model_v4 Glycerol-3-phosphate dehydrogenase 2 (EC 1.1.5.3) 0.9753 369 571 GO:0004368
GO:0046168
AF-A0A655A1U7-F1-model_v4 Glycerol-3-phosphate dehydrogenase 2 (EC 1.1.5.3) 0.973 404 571 GO:0004368
GO:0046168
AF-D9X9U9-F1-model_v4 Glycerol-3-phosphate dehydrogenase 0.9721 179 573 GO:0004368
GO:0046168

Map