F279754

General Info

Members Datasets Scaffolds Average Seq Length
182 125 153 566

Family's Representative Sequence

Representative Sequence 3300047472|Ga0495686_0000455|Ga0495686_0000455_51739_53583
Length 606
Sequence MSLSRLIAAFVRRQWRAYAGAALMLACVAALTVWVPRKIGAMIDGLAAHRLGGQALWLELASLVAIGATIYFLRVGWRQTLYAAAYQLGVDLRTRFYERLTVQGPAFFGQQRTGDLMALATNDIDAIEMAAGEALLAGFDGSLTLLMVLAIMVLGVDWRLALVALLPFPLMALAFWRVSRQVHIASVDSLRRFGALNDHVQESLAGVRTVRALGLEQRNGAQFSTLAGRAADASLAAQRWEAAYEPAVGLTLTAASALTLGLGGYLIWQGQLTIGALTSFSMYLGQLIWPMFAAGWVLSLIERGRAALARLQPMLDAPLTIADDGPVTQTPAGTLLIEHLDYAYPSRGAENRPDTHAGQDAGRILDQNVDKSAGRRTAQRPALAAISIALRPGQTLGLAGPTGSGKSTLLRLLLRQLTPSSGSIAWGGHALSDYTLGTLRAAISWVPQESFLFSASIADNIALGRPGATRQEIEHAATLAAIHEDILLFPDGYATAVGERGITLSGGQRQRVAIARALLADSALAVDTGTETRILAHLEALRRSRPGRSAIIASHRLSAVAGADLIVVLHEGRISETGSHETLLAADGWYASQWRYQQLEASLDAL

Samples

Sample ID Description Type Environment
1 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
2 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
3 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
4 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
5 2643221585 Pelomonas sp. Root662 Isolate Unclassified
6 2643221645 Massilia sp. Root351 Isolate Unclassified
7 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
8 2643221656 Pelomonas sp. Root405 Isolate Unclassified
9 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
10 2671180694 Paenibacillus sp. A3 Isolate Unclassified
11 2738541337 Pelomonas sp. BT06 Isolate Unclassified
12 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
13 2818991459 Paenibacillus sp. 597 Isolate Unclassified
14 2831864461 Roseateles noduli HZ7 Isolate Nodule
15 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
16 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
17 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
18 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
19 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
20 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
21 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
22 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
23 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
24 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
25 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
26 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
27 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
28 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
32 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
33 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
34 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
35 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
36 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
58 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
59 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
62 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
65 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
66 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
67 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
68 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
71 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
74 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
75 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
76 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
77 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
82 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
83 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
84 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
85 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
86 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
87 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
88 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
89 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
90 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
91 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
92 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
93 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
94 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
95 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
96 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
97 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
98 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
99 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
100 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
104 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
107 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
108 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
109 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
110 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
111 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
112 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
122 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
123 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
124 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
125 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.52
Metatranscriptomes 0
Isolates 16.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.09
Nodule 2.2
Rhizoplane 2.2
Rhizosphere 70.33
Stem 0
Stem Tuber 0
Unclassified 13.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10001240 3300003322 Bacteria 49675
2 rootL2_10003501 3300003322 Bacteria 8086
3 rootL2_10120187 3300003322 Bacteria 2613
4 rootH1_10011063 3300003323 Bacteria 4935
5 rootH1_10011082 3300003316 Bacteria 8546
6 rootH1_10011082 3300003323 Bacteria 4834
7 rootH1_10016755 3300003323 Bacteria 6098
8 Ga0055526_1009992 3300003771 Bacteria 4479
9 Ga0055524_1001208 3300003775 Bacteria 15319
10 Ga0055531_10000001 3300003794 Bacteria 543586
11 Ga0055531_10000732 3300003794 Bacteria 27747
12 Ga0055531_10008341 3300003794 Bacteria 5487
13 Ga0055531_10011386 3300003794 Bacteria 4296
14 Ga0065165_1000101 3300005262 Bacteria 141486
15 Ga0070680_100086639 3300005336 Bacteria 2589
16 Ga0070660_100029643 3300005339 Bacteria 4102
17 Ga0070679_100005137 3300005530 Bacteria 12102
18 Ga0068855_100028604 3300005563 Bacteria 6668
19 Ga0068856_100097173 3300005614 Bacteria 2934
20 Ga0068860_100201666 3300005843 Bacteria 1928
21 Ga0068862_100042281 3300005844 Bacteria 3882
22 Ga0075365_10008246 3300006038 Bacteria 5897
23 Ga0075370_10004122 3300006353 Bacteria 7005
24 Ga0099823_1003331 3300006944 Bacteria 15150
25 Ga0105240_10045951 3300009093 Bacteria 5536
26 Ga0157319_1000008 3300012497 Bacteria 315600
27 Ga0157371_10000001 3300013102 Bacteria 1162285
28 Ga0213872_10000006 3300021361 Bacteria 249845
29 Ga0213872_10000342 3300021361 Bacteria 39276
30 Ga0213872_10000767 3300021361 Bacteria 23552
31 Ga0213872_10001080 3300021361 Bacteria 18787
32 Ga0209673_1016652 3300025273 Bacteria 2738
33 Ga0209564_1000008 3300025295 Bacteria 953227
34 Ga0209050_1001274 3300025298 Bacteria 28926
35 Ga0209050_1003064 3300025298 Bacteria 12869
36 Ga0209256_1000413 3300025299 Bacteria 67123
37 Ga0209256_1003828 3300025299 Bacteria 10074
38 Ga0209051_1002377 3300025303 Bacteria 13590
39 Ga0209051_1020480 3300025303 Bacteria 2846
40 Ga0209257_1000033 3300025304 Bacteria 671006
41 Ga0209257_1002153 3300025304 Bacteria 20486
42 Ga0209257_1009531 3300025304 Bacteria 5166
43 Ga0207657_10034219 3300025919 Bacteria 4572
44 Ga0207702_10072500 3300026078 Bacteria 2968
45 Ga0209389_1002327 3300027296 Bacteria 14449
46 Ga0209371_1013895 3300027312 Bacteria 2234
47 Ga0265331_10014571 3300031250 Bacteria 4179
48 Ga0265327_10000012 3300031251 Bacteria 530403
49 Ga0307408_100000442 3300031548 Bacteria 36620
50 Ga0307412_10045784 3300031911 Bacteria 2862
51 Ga0307411_10000791 3300032005 Bacteria 11757
52 Ga0373951_0008852 3300035091 Bacteria 2270
53 Ga0373939_0000606 3300035114 Bacteria 8904
54 Ga0373960_0000636 3300035121 Bacteria 7201
55 Ga0373931_0001455 3300035691 Bacteria 10175
56 Ga0395899_0000330 3300037312 Bacteria 60063
57 Ga0395899_0005975 3300037312 Bacteria 9454
58 Ga0395900_0004177 3300037418 Bacteria 15336
59 Ga0395900_0054088 3300037418 Bacteria 4132
60 Ga0395900_0295189 3300037418 Bacteria 1608
61 Ga0395898_0001779 3300037466 Bacteria 28037
62 Ga0395898_0001791 3300037466 Bacteria 27917
63 Ga0395905_0001587 3300037471 Bacteria 27075
64 Ga0395905_0007343 3300037471 Bacteria 10975
65 Ga0395901_0006073 3300038443 Bacteria 12239
66 Ga0395901_0050438 3300038443 Bacteria 4323
67 Ga0436361_0019641 3300039447 Bacteria 127735
68 Ga0436361_0288570 3300039447 Bacteria 5329
69 Ga0436361_0298494 3300039447 Bacteria 28223
70 Ga0436361_0484071 3300039447 Bacteria 47769
71 Ga0436361_0696563 3300039447 Bacteria 6406
72 Ga0436361_0724516 3300039447 Bacteria 2631
73 Ga0436361_1218785 3300039447 Bacteria 111760
74 Ga0439431_0004731 3300041997 Bacteria 2994
75 Ga0439449_0000299 3300042007 Bacteria 17855
76 Ga0466965_0013106 3300044683 Bacteria 3908
77 Ga0466961_0031758 3300044693 Bacteria 3395
78 Ga0466957_0024312 3300044842 Bacteria 3584
79 Ga0466960_0005127 3300044901 Bacteria 5184
80 Ga0451576_0024759 3300045051 Bacteria 6478
81 Ga0495617_000002 3300046452 Bacteria 710121
82 Ga0495627_000111 3300046453 Bacteria 101652
83 Ga0495603_0016885 3300046455 Bacteria 4417
84 Ga0495638_0004311 3300046460 Bacteria 10797
85 Ga0495650_0000124 3300046471 Bacteria 180310
86 Ga0495650_0000169 3300046471 Bacteria 145238
87 Ga0495650_0016556 3300046471 Bacteria 3731
88 Ga0495605_0000092 3300046474 Bacteria 115315
89 Ga0495605_0011937 3300046474 Bacteria 4830
90 Ga0495605_0025892 3300046474 Bacteria 3053
91 Ga0495584_0002589 3300046491 Bacteria 10192
92 Ga0495584_0028327 3300046491 Bacteria 2838
93 Ga0495596_0001614 3300046500 Bacteria 12826
94 Ga0495607_0036697 3300046501 Bacteria 2950
95 Ga0495607_0070287 3300046501 Bacteria 1957
96 Ga0495583_0007648 3300046506 Bacteria 6738
97 Ga0495583_0015363 3300046506 Bacteria 4167
98 Ga0495606_0000043 3300046507 Bacteria 214367
99 Ga0495606_0000972 3300046507 Bacteria 41909
100 Ga0495606_0039609 3300046507 Bacteria 3173
101 Ga0495616_0000171 3300046513 Bacteria 55006
102 Ga0495616_0018882 3300046513 Bacteria 3770
103 Ga0495632_0001214 3300046519 Bacteria 21848
104 Ga0495643_0000213 3300046522 Bacteria 89236
105 Ga0495648_0000193 3300046524 Bacteria 70395
106 Ga0495648_0000497 3300046524 Bacteria 42400
107 Ga0495648_0004465 3300046524 Bacteria 11947
108 Ga0495642_0000500 3300046528 Bacteria 20148
109 Ga0495642_0006509 3300046528 Bacteria 4480
110 Ga0495654_0007558 3300046530 Bacteria 6060
111 Ga0495654_0022314 3300046530 Bacteria 3288
112 Ga0495654_0042989 3300046530 Bacteria 2241
113 Ga0495609_0000363 3300046538 Bacteria 38970
114 Ga0495609_0015656 3300046538 Bacteria 3546
115 Ga0495597_0001422 3300046542 Bacteria 17215
116 Ga0495633_0033628 3300046558 Bacteria 2471
117 Ga0495668_0003970 3300046616 Bacteria 10780
118 Ga0495625_0007211 3300046660 Bacteria 9731
119 Ga0495659_0000004 3300046664 Bacteria 143914
120 Ga0495661_0043058 3300046665 Bacteria 2778
121 Ga0495588_0029666 3300046674 Bacteria 2745
122 Ga0495588_0029911 3300046674 Bacteria 2734
123 Ga0495671_0000067 3300046692 Bacteria 103441
124 Ga0495671_0000213 3300046692 Bacteria 50627
125 Ga0495589_0000848 3300046794 Bacteria 19173
126 Ga0495589_0001991 3300046794 Bacteria 11564
127 Ga0495589_0002435 3300046794 Bacteria 10465
128 Ga0495660_0002559 3300046810 Bacteria 11588
129 Ga0495660_0020376 3300046810 Bacteria 3801
130 Ga0495660_0023526 3300046810 Bacteria 3513
131 Ga0495660_0044791 3300046810 Bacteria 2432
132 Ga0495672_0000045 3300047320 Bacteria 255145
133 Ga0495672_0000050 3300047320 Bacteria 240336
134 Ga0495672_0001058 3300047320 Bacteria 28103
135 Ga0495672_0006018 3300047320 Bacteria 9491
136 Ga0495683_0003317 3300047323 Bacteria 9407
137 Ga0495677_0024484 3300047445 Bacteria 2189
138 Ga0495681_0000057 3300047470 Bacteria 103340
139 Ga0495686_0000279 3300047472 Bacteria 90202
140 Ga0495686_0000455 3300047472 Bacteria 61537
141 Ga0495686_0011870 3300047472 Bacteria 6125
142 Ga0495686_0031899 3300047472 Bacteria 3413
143 Ga0495626_0012847 3300048091 Bacteria 4371
144 Ga0496102_0000159 3300048905 Bacteria 91043
145 Ga0496103_0007438 3300048906 Bacteria 6529
146 Ga0496114_0138143 3300048917 Bacteria 2108
147 Ga0496115_0005820 3300048918 Bacteria 8983
148 Ga0496124_0005881 3300048927 Bacteria 13580
149 Ga0496124_0039752 3300048927 Bacteria 4074
150 Ga0496126_0056162 3300048929 Bacteria 3560
151 Ga0495678_000105 3300049459 Bacteria 103599
152 nmdc:mga07m45_681_c1 3300050496 Bacteria 14435
153 Ga0500622_0009338 3300053156 Bacteria 5431

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037418 Ga0395900_0295189 Ga0395900_0295189_20_1414 464
2 3300046665 Ga0495661_0043058 Ga0495661_0043058_1295_2764 477
3 3300048917 Ga0496114_0138143 Ga0496114_0138143_187_1710 506
4 3300046538 Ga0495609_0015656 Ga0495609_0015656_25_1674 510
5 3300047472 Ga0495686_0031899 Ga0495686_0031899_49_1698 510
6 3300035091 Ga0373951_0008852 Ga0373951_0008852_362_2140 517
7 3300035114 Ga0373939_0000606 Ga0373939_0000606_300_2078 517
8 3300035121 Ga0373960_0000636 Ga0373960_0000636_300_2078 517
9 3300035691 Ga0373931_0001455 Ga0373931_0001455_1444_3222 517
10 3300044842 Ga0466957_0024312 Ga0466957_0024312_37_1749 523
11 3300003794 Ga0055531_10000001 Ga0055531_1000000161 524
12 3300025298 Ga0209050_1003064 Ga0209050_100306412 524
13 3300025303 Ga0209051_1020480 Ga0209051_10204802 524
14 3300025304 Ga0209257_1000033 Ga0209257_1000033148 524
15 3300046674 Ga0495588_0029666 Ga0495588_0029666_1051_2730 525
16 3300047445 Ga0495677_0024484 Ga0495677_0024484_452_2146 530
17 3300046501 Ga0495607_0036697 Ga0495607_0036697_1211_2905 534
18 3300046491 Ga0495584_0028327 Ga0495584_0028327_641_2359 537
19 3300037312 Ga0395899_0000330 Ga0395899_0000330_4404_6155 538
20 3300048091 Ga0495626_0012847 Ga0495626_0012847_405_2156 543
21 3300046501 Ga0495607_0070287 Ga0495607_0070287_28_1740 544
22 3300046506 Ga0495583_0007648 Ga0495583_0007648_1812_3575 545
23 3300046522 Ga0495643_0000213 Ga0495643_0000213_24628_26391 545
24 3300003322 rootL2_10120187 rootL2_101201871 548
25 3300003323 rootH1_10011063 rootH1_100110632 548
26 3300046674 Ga0495588_0029911 Ga0495588_0029911_539_2290 548
27 3300048918 Ga0496115_0005820 Ga0496115_0005820_2352_4103 548
28 3300044683 Ga0466965_0013106 Ga0466965_0013106_1551_3320 550
29 3300046474 Ga0495605_0025892 Ga0495605_0025892_853_2616 550
30 3300046491 Ga0495584_0002589 Ga0495584_0002589_2486_4249 550
31 3300046530 Ga0495654_0022314 Ga0495654_0022314_460_2223 550
32 3300046542 Ga0495597_0001422 Ga0495597_0001422_4756_6519 550
33 3300046616 Ga0495668_0003970 Ga0495668_0003970_4296_6059 550
34 3300046794 Ga0495589_0002435 Ga0495589_0002435_3890_5653 550
35 3300047320 Ga0495672_0006018 Ga0495672_0006018_1478_3241 550
36 3300046452 Ga0495617_000002 Ga0495617_000002_515481_517244 551
37 3300046453 Ga0495627_000111 Ga0495627_000111_45724_47487 551
38 3300046474 Ga0495605_0000092 Ga0495605_0000092_56727_58490 551
39 3300046513 Ga0495616_0018882 Ga0495616_0018882_1096_2859 551
40 3300046524 Ga0495648_0000193 Ga0495648_0000193_61955_63718 551
41 3300046528 Ga0495642_0000500 Ga0495642_0000500_813_2576 551
42 3300046692 Ga0495671_0000067 Ga0495671_0000067_45604_47367 551
43 3300046794 Ga0495589_0000848 Ga0495589_0000848_3866_5629 551
44 3300046810 Ga0495660_0002559 Ga0495660_0002559_1827_3599 551
45 3300003794 Ga0055531_10000732 Ga0055531_100007323 552
46 3300021361 Ga0213872_10000342 Ga0213872_1000034233 552
47 3300039447 Ga0436361_1218785 Ga0436361_1218785_84379_86139 552
48 3300047470 Ga0495681_0000057 Ga0495681_0000057_59132_60895 552
49 3300037466 Ga0395898_0001791 Ga0395898_0001791_21224_22966 553
50 3300038443 Ga0395901_0050438 Ga0395901_0050438_2290_4032 553
51 3300046471 Ga0495650_0000124 Ga0495650_0000124_50235_51995 553
52 3300046471 Ga0495650_0016556 Ga0495650_0016556_611_2374 553
53 3300046474 Ga0495605_0011937 Ga0495605_0011937_2012_3772 553
54 3300046500 Ga0495596_0001614 Ga0495596_0001614_5613_7373 553
55 3300046506 Ga0495583_0015363 Ga0495583_0015363_1421_3184 553
56 3300046524 Ga0495648_0000497 Ga0495648_0000497_28309_30069 553
57 3300046794 Ga0495589_0001991 Ga0495589_0001991_7031_8791 553
58 3300046810 Ga0495660_0023526 Ga0495660_0023526_785_2548 553
59 3300047320 Ga0495672_0001058 Ga0495672_0001058_12246_14006 553
60 3300047323 Ga0495683_0003317 Ga0495683_0003317_1860_3620 553
61 3300048905 Ga0496102_0000159 Ga0496102_0000159_52485_54248 553
62 3300048906 Ga0496103_0007438 Ga0496103_0007438_4039_5802 553
63 3300031911 Ga0307412_10045784 Ga0307412_100457843 554
64 3300046558 Ga0495633_0033628 Ga0495633_0033628_401_2152 554
65 3300046455 Ga0495603_0016885 Ga0495603_0016885_2512_4275 555
66 3300046513 Ga0495616_0000171 Ga0495616_0000171_50238_52001 555
67 3300046519 Ga0495632_0001214 Ga0495632_0001214_1239_3002 555
68 3300046528 Ga0495642_0006509 Ga0495642_0006509_1905_3668 555
69 3300046530 Ga0495654_0007558 Ga0495654_0007558_1179_2942 555
70 3300046538 Ga0495609_0000363 Ga0495609_0000363_7482_9242 555
71 3300048927 Ga0496124_0005881 Ga0496124_0005881_2678_4438 556
72 3300042007 Ga0439449_0000299 Ga0439449_0000299_1839_3605 557
73 3300046507 Ga0495606_0039609 Ga0495606_0039609_1200_2993 560
74 3300046524 Ga0495648_0004465 Ga0495648_0004465_6922_8685 560
75 3300046530 Ga0495654_0042989 Ga0495654_0042989_61_1833 560
76 3300046660 Ga0495625_0007211 Ga0495625_0007211_5830_7623 560
77 3300046664 Ga0495659_0000004 Ga0495659_0000004_43880_45652 560
78 3300046692 Ga0495671_0000213 Ga0495671_0000213_43663_45435 560
79 3300046810 Ga0495660_0020376 Ga0495660_0020376_619_2412 560
80 3300047320 Ga0495672_0000045 Ga0495672_0000045_120173_121966 560
81 3300049459 Ga0495678_000105 Ga0495678_000105_56166_57929 560
82 3300047472 Ga0495686_0000279 Ga0495686_0000279_53111_54889 561
83 3300046460 Ga0495638_0004311 Ga0495638_0004311_634_2385 563
84 3300005843 Ga0068860_100201666 Ga0068860_1002016662 564
85 3300045051 Ga0451576_0024759 Ga0451576_0024759_1763_3550 564
86 3300005844 Ga0068862_100042281 Ga0068862_1000422812 566
87 3300032005 Ga0307411_10000791 Ga0307411_100007917 566
88 3300041997 Ga0439431_0004731 Ga0439431_0004731_1010_2752 566
89 3300046810 Ga0495660_0044791 Ga0495660_0044791_556_2388 567
90 3300047320 Ga0495672_0000050 Ga0495672_0000050_235181_237013 567
91 3300013102 Ga0157371_10000001 Ga0157371_10000001712 568
92 3300046471 Ga0495650_0000169 Ga0495650_0000169_64326_66089 568
93 3300046507 Ga0495606_0000972 Ga0495606_0000972_16859_18622 568
94 3300031250 Ga0265331_10014571 Ga0265331_100145712 569
95 3300031251 Ga0265327_10000012 Ga0265327_10000012164 569
96 3300037418 Ga0395900_0054088 Ga0395900_0054088_14_1765 569
97 iso_pu_bacteria 2857453340 2857457701 571
98 3300021361 Ga0213872_10000767 Ga0213872_1000076718 574
99 3300039447 Ga0436361_0298494 Ga0436361_0298494_5665_7407 574
100 iso_pu_bacteria 2643221585 2643932772 574
101 iso_pu_bacteria 2643221656 2644314022 574
102 3300044901 Ga0466960_0005127 Ga0466960_0005127_2100_3842 575
103 3300047472 Ga0495686_0000455 Ga0495686_0000455_51739_53583 575
104 iso_pu_bacteria 2585428059 2587742336 575
105 iso_pu_bacteria 2643221676 2644423697 575
106 iso_pu_bacteria 2818991459 2819674291 575
107 iso_pu_bacteria 2904113452 2904119557 575
108 iso_pu_bacteria 2904755435 2904762630 575
109 iso_pu_bacteria 2919425241 2919430424 575
110 iso_pu_bacteria 2925326138 2925327491 575
111 iso_pu_bacteria 8054795415 8054796396 575
112 iso_pu_bacteria 2512564039 2512729874 576
113 iso_pu_bacteria 2524023129 2524191875 576
114 iso_pu_bacteria 2593339198 2595319138 576
115 iso_pu_bacteria 2671180694 2673822436 576
116 iso_pu_bacteria 2881101125 2881103805 576
117 iso_pu_bacteria 2889295896 2889299607 576
118 iso_pu_bacteria 2971410472 2971410697 576
119 iso_pu_bacteria 2980182181 2980183085 576
120 iso_pu_bacteria 2981284811 2981288713 576
121 iso_pu_bacteria 2981289755 2981293534 576
122 iso_pu_bacteria 2981980479 2981984230 576
123 iso_pu_bacteria 2981985349 2981989250 576
124 iso_pu_bacteria 2998344455 2998348268 576
125 iso_pu_bacteria 8056533031 8056534926 576
126 3300006353 Ga0075370_10004122 Ga0075370_100041224 578
127 3300037471 Ga0395905_0001587 Ga0395905_0001587_5742_7478 578
128 3300039447 Ga0436361_0019641 Ga0436361_0019641_107064_108800 578
129 3300050496 nmdc:mga07m45_681_c1 nmdc:mga07m45_681_c1_5172_6908 578
130 iso_pu_bacteria 2643221645 2644251468 579
131 iso_pu_bacteria 2808606418 2809144483 579
132 iso_pu_bacteria 2831864461 2831869129 579
133 3300003322 rootL2_10003501 rootL2_100035012 580
134 3300005336 Ga0070680_100086639 Ga0070680_1000866392 580
135 3300005339 Ga0070660_100029643 Ga0070660_1000296432 580
136 3300005530 Ga0070679_100005137 Ga0070679_1000051376 580
137 3300005563 Ga0068855_100028604 Ga0068855_1000286042 580
138 3300006038 Ga0075365_10008246 Ga0075365_100082466 580
139 3300009093 Ga0105240_10045951 Ga0105240_100459512 580
140 3300025919 Ga0207657_10034219 Ga0207657_100342192 580
141 3300037312 Ga0395899_0005975 Ga0395899_0005975_2850_4592 580
142 3300037418 Ga0395900_0004177 Ga0395900_0004177_2792_4534 580
143 3300037466 Ga0395898_0001779 Ga0395898_0001779_12858_14600 580
144 3300037471 Ga0395905_0007343 Ga0395905_0007343_6572_8320 580
145 3300038443 Ga0395901_0006073 Ga0395901_0006073_14_1756 580
146 3300039447 Ga0436361_0288570 Ga0436361_0288570_3431_5191 580
147 3300039447 Ga0436361_0696563 Ga0436361_0696563_4038_5795 580
148 3300044693 Ga0466961_0031758 Ga0466961_0031758_1397_3214 580
149 3300003322 rootL2_10001240 rootL2_100012407 583
150 3300003323 rootH1_10011082 rootH1_100110823 583
151 3300003323 rootH1_10016755 rootH1_100167552 583
152 3300003771 Ga0055526_1009992 Ga0055526_10099923 583
153 3300003775 Ga0055524_1001208 Ga0055524_10012089 583
154 3300003794 Ga0055531_10008341 Ga0055531_100083414 583
155 3300003794 Ga0055531_10011386 Ga0055531_100113863 583
156 3300005262 Ga0065165_1000101 Ga0065165_1000101117 583
157 3300005614 Ga0068856_100097173 Ga0068856_1000971732 583
158 3300006944 Ga0099823_1003331 Ga0099823_100333110 583
159 3300012497 Ga0157319_1000008 Ga0157319_100000883 583
160 3300021361 Ga0213872_10000006 Ga0213872_1000000685 583
161 3300021361 Ga0213872_10001080 Ga0213872_1000108017 583
162 3300025273 Ga0209673_1016652 Ga0209673_10166522 583
163 3300025295 Ga0209564_1000008 Ga0209564_1000008645 583
164 3300025298 Ga0209050_1001274 Ga0209050_100127417 583
165 3300025299 Ga0209256_1000413 Ga0209256_100041317 583
166 3300025299 Ga0209256_1003828 Ga0209256_10038284 583
167 3300025303 Ga0209051_1002377 Ga0209051_10023777 583
168 3300025304 Ga0209257_1002153 Ga0209257_100215314 583
169 3300025304 Ga0209257_1009531 Ga0209257_10095314 583
170 3300026078 Ga0207702_10072500 Ga0207702_100725002 583
171 3300027296 Ga0209389_1002327 Ga0209389_100232710 583
172 3300027312 Ga0209371_1013895 Ga0209371_10138951 583
173 3300031548 Ga0307408_100000442 Ga0307408_10000044210 583
174 3300039447 Ga0436361_0484071 Ga0436361_0484071_8803_10557 583
175 3300039447 Ga0436361_0724516 Ga0436361_0724516_463_2214 583
176 3300046507 Ga0495606_0000043 Ga0495606_0000043_135837_137627 583
177 3300047472 Ga0495686_0011870 Ga0495686_0011870_86_1837 583
178 3300048927 Ga0496124_0039752 Ga0496124_0039752_1764_3515 583
179 3300048929 Ga0496126_0056162 Ga0496126_0056162_606_2357 583
180 3300053156 Ga0500622_0009338 Ga0500622_0009338_3547_5301 583
181 iso_pu_bacteria 2643221646 2644260267 583
182 iso_pu_bacteria 2738541337 2739056076 583

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

383

526

0.91

PF00664

ABC_membrane

ABC transporter transmembrane region

19

291

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vx4-assembly1.cif.gz_A crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway 0.9451 331 569
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9407 335 574
2fgj-assembly3.cif.gz_C crystal structure of the abc-cassette h662a mutant of hlyb with bound atp 0.9322 335 574
2ixe-assembly1.cif.gz_A crystal structure of the atpase domain of tap1 with atp (d645n mutant) 0.9275 325 572
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9257 335 574
ID Description Score Start End Superfamily
af_P77265_327_585_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9607 327 583 3.40.50.300
5mkkB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9517 326 575 3.40.50.300
3vx4D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9448 331 571 3.40.50.300
af_A0A1D6Q2V7_231_304_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9429 332 399 3.40.50.300
af_P9WQJ7_327_576_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9418 333 578 3.40.50.300
ID Description Score Start End GO Terms
AF-T0VG12-F1-model_v4 deleted 0.9647 336 582
AF-A0A652JU67-F1-model_v4 ABC transporter ATP-binding protein 0.9618 329 569 GO:0005524
GO:0015421
GO:0016887
GO:0090374
AF-T0VG12-F1-model_v4 deleted 0.9455 336 582
AF-A0A444J7Z8-F1-model_v4 ABC transporter 0.9403 415 577 GO:0005524
GO:0015421
GO:0016887
AF-A0A7S3N3E6-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.94 412 582 GO:0005524
GO:0005743
GO:0015421
GO:0016887
GO:0090374

Feature Viewer

pLDDT pTM Quality
88.76 0.79 High
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Predicted Structure (AlphaFold2)

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