F279544

General Info

Members Datasets Scaffolds Average Seq Length
182 117 364 392

Family's Representative Sequence

Representative Sequence 3300041456|Ga0451795_0105476|Ga0451795_0105476_89_1477
Length 462
Sequence MDRVGDAGHPPHVADALAWLRQLVDHEISSVGISAGNIEGLTLEPARVALDALGRPDDSFRIVHVTGTNGKGSVCRMVESLVGSAGLRSRPMRVALSSFGIAIGIATMIAVIGISASTQAKLARQLDALGTNLLVASPGKSLFSGEKVSLPQDAAGRLSRIDGVEQVGATGSINQSARRNEKIPAAETSGIAVQAARPELLGVLRARISSGSWFNAATARYPAVVLGHVSARRLGILAPGEQVWIGNRSFTVIGILAPVPLAPEIERSALVGWHAAQTWLNFDGHPTSVYERSSDRSVDSVRTLIPRTLDPKSPQNVTVSVPSAALEAKAATEGAFNTLLLGLGGIALLVGGIGVANTMIISVLERRFEIGLRRALGATRGQIRIQFVTESLLLSGLGGVTGAALGTVGTGIYARSSGLPWVVPPWAIGGGLGATLLIGTIAGLYPAVRAARLSPTLALHAT

Samples

Sample ID Description Type Environment
1 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
54 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
55 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
56 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
60 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
67 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
68 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
69 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
72 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
73 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
74 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
75 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
76 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
80 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
81 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
82 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
83 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
84 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
85 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
86 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
87 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
88 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
89 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
90 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
91 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
92 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
93 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
94 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
95 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
96 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
97 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
98 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
99 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
100 2671180195 Frankia sp. CcI49 Isolate Nodule
101 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
102 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
103 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
104 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
105 2773857922 Frankia sp. CcI49 Isolate Nodule
106 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
107 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
108 2867369537 Streptomyces sp. Z26 Isolate Unclassified
109 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
110 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
111 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
112 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
113 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
114 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
115 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
116 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
117 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.36
Metatranscriptomes 0
Isolates 12.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.04
Nodule 1.1
Rhizoplane 8.24
Rhizosphere 69.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451795_0105476 3300041456 Bacteria 1598
2 JGI25406J46586_10007345 3300003203 Bacteria 5033
3 rootH2_10026124 3300003320 Bacteria 1732
4 JGI25407J50210_10000616 3300003373 Bacteria 7294
5 JGI25407J50210_10009530 3300003373 Bacteria 2462
6 Ga0070658_10018883 3300005327 Bacteria 5523
7 Ga0070683_100002000 3300005329 Bacteria 15990
8 Ga0070683_100006168 3300005329 Bacteria 10052
9 Ga0070683_100010267 3300005329 Bacteria 8048
10 Ga0070683_100078836 3300005329 Bacteria 3082
11 Ga0068869_100028299 3300005334 Bacteria 3915
12 Ga0070680_100115069 3300005336 Bacteria 2241
13 Ga0070682_100033177 3300005337 Bacteria 3135
14 Ga0070682_100051014 3300005337 Bacteria 2585
15 Ga0070660_100006517 3300005339 Bacteria 8098
16 Ga0070661_100010583 3300005344 Bacteria 6415
17 Ga0070668_100000641 3300005347 Bacteria 23592
18 Ga0070668_100051204 3300005347 Bacteria 3181
19 Ga0070669_100006582 3300005353 Bacteria 8363
20 Ga0070659_100000297 3300005366 Bacteria 38915
21 Ga0070667_100076807 3300005367 Bacteria 2851
22 Ga0070709_10035558 3300005434 Bacteria 3028
23 Ga0070663_100003749 3300005455 Bacteria 8819
24 Ga0070679_100053665 3300005530 Bacteria 4012
25 Ga0070684_100003941 3300005535 Bacteria 11242
26 Ga0070684_100009055 3300005535 Bacteria 7825
27 Ga0070684_100024009 3300005535 Bacteria 5109
28 Ga0070665_100137948 3300005548 Bacteria 2442
29 Ga0068857_100038966 3300005577 Bacteria 4208
30 Ga0068864_100014905 3300005618 Bacteria 6458
31 Ga0068863_100002983 3300005841 Bacteria 16737
32 Ga0068858_100008867 3300005842 Bacteria 9644
33 Ga0068860_100108245 3300005843 Bacteria 2656
34 Ga0081538_10012758 3300005981 Bacteria 6711
35 Ga0081540_1004719 3300005983 Bacteria 10310
36 Ga0081540_1013544 3300005983 Bacteria 5294
37 Ga0081540_1015512 3300005983 Bacteria 4822
38 Ga0081539_10000079 3300005985 Bacteria 223413
39 Ga0081539_10000451 3300005985 Bacteria 87519
40 Ga0081539_10000840 3300005985 Bacteria 58916
41 Ga0070716_100177974 3300006173 Bacteria 1394
42 Ga0075428_100000075 3300006844 Bacteria 81795
43 Ga0075428_100004842 3300006844 Bacteria 14932
44 Ga0075428_100026938 3300006844 Bacteria 6366
45 Ga0075428_100044742 3300006844 Bacteria 4864
46 Ga0075430_100002232 3300006846 Bacteria 16054
47 Ga0075430_100050181 3300006846 Bacteria 3520
48 Ga0075431_100016717 3300006847 Bacteria 7450
49 Ga0075431_100040229 3300006847 Bacteria 4817
50 Ga0075431_100219204 3300006847 Bacteria 1941
51 Ga0075429_100040637 3300006880 Bacteria 4050
52 Ga0075429_100061852 3300006880 Bacteria 3262
53 Ga0075429_100234155 3300006880 Bacteria 1609
54 Ga0114129_10000097 3300009147 Bacteria 84669
55 Ga0114129_10002921 3300009147 Bacteria 23900
56 Ga0114129_10018771 3300009147 Bacteria 9851
57 Ga0114129_10040595 3300009147 Bacteria 6559
58 Ga0114129_10099775 3300009147 Bacteria 4018
59 Ga0114129_10135070 3300009147 Bacteria 3385
60 Ga0114129_10143041 3300009147 Bacteria 3277
61 Ga0105248_10123479 3300009177 Bacteria 2921
62 Ga0163163_10015320 3300014325 Bacteria 7087
63 Ga0157379_10108823 3300014968 Bacteria 2489
64 Ga0207699_10175471 3300025906 Bacteria 1437
65 Ga0207657_10055471 3300025919 Bacteria 3422
66 Ga0207681_10022422 3300025923 Bacteria 4027
67 Ga0207690_10000064 3300025932 Bacteria 95169
68 Ga0207689_10031697 3300025942 Bacteria 4398
69 Ga0207661_10005973 3300025944 Bacteria 8598
70 Ga0207661_10006869 3300025944 Bacteria 8071
71 Ga0207661_10017768 3300025944 Bacteria 5270
72 Ga0207661_10054537 3300025944 Bacteria 3202
73 Ga0207661_10105140 3300025944 Bacteria 2378
74 Ga0207679_10236323 3300025945 Bacteria 1546
75 Ga0207668_10002913 3300025972 Bacteria 10043
76 Ga0207668_10010596 3300025972 Bacteria 5576
77 Ga0207658_10061942 3300025986 Bacteria 2798
78 Ga0207658_10088537 3300025986 Bacteria 2394
79 Ga0207658_10095644 3300025986 Bacteria 2315
80 Ga0207677_10057439 3300026023 Bacteria 2672
81 Ga0207703_10030394 3300026035 Bacteria 4269
82 Ga0207678_10000161 3300026067 Bacteria 55954
83 Ga0207641_10036095 3300026088 Bacteria 4125
84 Ga0207674_10028317 3300026116 Bacteria 5915
85 Ga0207674_10062883 3300026116 Bacteria 3748
86 Ga0268264_10187526 3300028381 Bacteria 1883
87 Ga0307517_10078752 3300028786 Bacteria 2845
88 Ga0307515_10000486 3300028794 Bacteria 94816
89 Ga0307515_10053708 3300028794 Bacteria 5935
90 Ga0307515_10103644 3300028794 Bacteria 3408
91 Ga0307512_10008127 3300030522 Bacteria 10274
92 Ga0265340_10001440 3300031247 Bacteria 13655
93 Ga0307513_10045023 3300031456 Bacteria 4826
94 Ga0307513_10112913 3300031456 Bacteria 2706
95 Ga0307513_10118722 3300031456 Bacteria 2618
96 Ga0307408_100057265 3300031548 Bacteria 2829
97 Ga0307508_10006596 3300031616 Bacteria 10898
98 Ga0307508_10015214 3300031616 Bacteria 7012
99 Ga0307508_10021296 3300031616 Bacteria 5893
100 Ga0307508_10083280 3300031616 Bacteria 2781
101 Ga0307516_10006747 3300031730 Bacteria 13412
102 Ga0307516_10010243 3300031730 Bacteria 10331
103 Ga0307516_10020852 3300031730 Bacteria 6763
104 Ga0307516_10039183 3300031730 Bacteria 4725
105 Ga0307405_10002659 3300031731 Bacteria 7956
106 Ga0307410_10018030 3300031852 Bacteria 4256
107 Ga0307406_10042751 3300031901 Bacteria 2830
108 Ga0307406_10189001 3300031901 Bacteria 1506
109 Ga0307406_10190271 3300031901 Bacteria 1502
110 Ga0307409_100004523 3300031995 Bacteria 7831
111 Ga0307409_100098281 3300031995 Bacteria 2420
112 Ga0307416_100000172 3300032002 Bacteria 36330
113 Ga0307415_100000043 3300032126 Bacteria 54688
114 Ga0307415_100201237 3300032126 Bacteria 1581
115 Ga0307507_10007411 3300033179 Bacteria 15986
116 Ga0307510_10078908 3300033180 Bacteria 3215
117 Ga0373951_0000239 3300035091 Bacteria 18591
118 Ga0373935_0006307 3300035692 Bacteria 7066
119 Ga0495643_0005367 3300046522 Bacteria 8679
120 Ga0495622_0069322 3300046557 Bacteria 1628
121 Ga0495683_0085183 3300047323 Bacteria 1537
122 Ga0495681_0032926 3300047470 Bacteria 2602
123 Ga0495686_0038111 3300047472 Bacteria 3076
124 Ga0496103_0023036 3300048906 Bacteria 3754
125 Ga0496104_0012468 3300048907 Bacteria 7644
126 Ga0496105_0078456 3300048908 Bacteria 2726
127 Ga0496107_0168146 3300048910 Bacteria 1626
128 Ga0496108_0011064 3300048911 Bacteria 7327
129 Ga0496108_0040216 3300048911 Bacteria 3896
130 Ga0496109_0030151 3300048912 Bacteria 4862
131 Ga0496109_0067403 3300048912 Bacteria 3278
132 Ga0496109_0075304 3300048912 Bacteria 3103
133 Ga0496111_0011906 3300048914 Bacteria 5877
134 Ga0496111_0023490 3300048914 Bacteria 4330
135 Ga0496112_0003649 3300048915 Bacteria 12821
136 Ga0496112_0018083 3300048915 Bacteria 6632
137 Ga0496112_0109723 3300048915 Bacteria 2729
138 Ga0501046_0091269 3300049580 Bacteria 2343
139 nmdc:mga05p37_124388_c1 3300050507 Bacteria 3168
140 nmdc:mga05p37_76820_c1 3300050507 Bacteria 4111
141 nmdc:mga05p37_7829_c1 3300050507 Bacteria 12613
142 nmdc:mga09592_151754_c1 3300050508 Bacteria 1999
143 nmdc:mga09592_43577_c1 3300050508 Bacteria 3776
144 nmdc:mga0qj67_63481_c1 3300050509 Bacteria 2937
145 nmdc:mga06r32_35230_c1 3300050510 Bacteria 4723
146 nmdc:mga06r32_53966_c1 3300050510 Bacteria 3853
147 nmdc:mga06r32_82496_c1 3300050510 Bacteria 3132
148 nmdc:mga06r32_90479_c1 3300050510 Bacteria 2990
149 Ga0500646_0000180 3300053090 Bacteria 18865
150 Ga0500646_0003640 3300053090 Bacteria 3950
151 Ga0500646_0004416 3300053090 Bacteria 3565
152 Ga0500583_0031702 3300053092 Bacteria 2327
153 Ga0500583_0047719 3300053092 Bacteria 1974
154 Ga0500560_000696 3300053107 Bacteria 5016
155 Ga0500573_0002284 3300053140 Bacteria 9516
156 Ga0500588_0001116 3300053146 Bacteria 4908
157 Ga0500616_0000243 3300053153 Bacteria 85649
158 Ga0500633_0002507 3300053160 Bacteria 3796
159 Ga0500634_0018188 3300053161 Bacteria 3772
160 2515854468 2515154155 Bacteria 7985436
161 2623585851 2622736626 Bacteria 7181580
162 2644404834 2643221673 Bacteria 9196637
163 2671834262 2671180195 Bacteria 9757215
164 2676486915 2675903059 Bacteria 8644972
165 2753075514 2751185734 Bacteria 8863695
166 2753268557 2751185782 Bacteria 11227053
167 2772644058 2772190715 Bacteria 6959372
168 2772645188 2772190715 Bacteria 6959372
169 2774852418 2773857922 Bacteria 9757215
170 2795794887 2795385472 Bacteria 6627535
171 2861526342 2861520306 Bacteria 8348283
172 2867372587 2867369537 Bacteria 6501581
173 2870725052 2870721527 Bacteria 9689237
174 2891398771 2891395885 Bacteria 9251614
175 2918508649 2918501144 Bacteria 8668083
176 2935393928 2935390628 Bacteria 7043367
177 3002999034 3002998708 Bacteria 11715108
178 8001782914 8001781756 Bacteria 9586736
179 8001784140 8001781756 Bacteria 9586736
180 8025538059 8025530807 Bacteria 8495698
181 8053953091 8053945823 Bacteria 8962862
182 8055175836 8055172936 Bacteria 9305943
183 Ga0451795_0105476
184 JGI25406J46586_10007345
185 rootH2_10026124
186 JGI25407J50210_10000616
187 JGI25407J50210_10009530
188 Ga0070658_10018883
189 Ga0070683_100002000
190 Ga0070683_100006168
191 Ga0070683_100010267
192 Ga0070683_100078836
193 Ga0068869_100028299
194 Ga0070680_100115069
195 Ga0070682_100033177
196 Ga0070682_100051014
197 Ga0070660_100006517
198 Ga0070661_100010583
199 Ga0070668_100000641
200 Ga0070668_100051204
201 Ga0070669_100006582
202 Ga0070659_100000297
203 Ga0070667_100076807
204 Ga0070709_10035558
205 Ga0070663_100003749
206 Ga0070679_100053665
207 Ga0070684_100003941
208 Ga0070684_100009055
209 Ga0070684_100024009
210 Ga0070665_100137948
211 Ga0068857_100038966
212 Ga0068864_100014905
213 Ga0068863_100002983
214 Ga0068858_100008867
215 Ga0068860_100108245
216 Ga0081538_10012758
217 Ga0081540_1004719
218 Ga0081540_1013544
219 Ga0081540_1015512
220 Ga0081539_10000079
221 Ga0081539_10000451
222 Ga0081539_10000840
223 Ga0070716_100177974
224 Ga0075428_100000075
225 Ga0075428_100004842
226 Ga0075428_100026938
227 Ga0075428_100044742
228 Ga0075430_100002232
229 Ga0075430_100050181
230 Ga0075431_100016717
231 Ga0075431_100040229
232 Ga0075431_100219204
233 Ga0075429_100040637
234 Ga0075429_100061852
235 Ga0075429_100234155
236 Ga0114129_10000097
237 Ga0114129_10002921
238 Ga0114129_10018771
239 Ga0114129_10040595
240 Ga0114129_10099775
241 Ga0114129_10135070
242 Ga0114129_10143041
243 Ga0105248_10123479
244 Ga0163163_10015320
245 Ga0157379_10108823
246 Ga0207699_10175471
247 Ga0207657_10055471
248 Ga0207681_10022422
249 Ga0207690_10000064
250 Ga0207689_10031697
251 Ga0207661_10005973
252 Ga0207661_10006869
253 Ga0207661_10017768
254 Ga0207661_10054537
255 Ga0207661_10105140
256 Ga0207679_10236323
257 Ga0207668_10002913
258 Ga0207668_10010596
259 Ga0207658_10061942
260 Ga0207658_10088537
261 Ga0207658_10095644
262 Ga0207677_10057439
263 Ga0207703_10030394
264 Ga0207678_10000161
265 Ga0207641_10036095
266 Ga0207674_10028317
267 Ga0207674_10062883
268 Ga0268264_10187526
269 Ga0307517_10078752
270 Ga0307515_10000486
271 Ga0307515_10053708
272 Ga0307515_10103644
273 Ga0307512_10008127
274 Ga0265340_10001440
275 Ga0307513_10045023
276 Ga0307513_10112913
277 Ga0307513_10118722
278 Ga0307408_100057265
279 Ga0307508_10006596
280 Ga0307508_10015214
281 Ga0307508_10021296
282 Ga0307508_10083280
283 Ga0307516_10006747
284 Ga0307516_10010243
285 Ga0307516_10020852
286 Ga0307516_10039183
287 Ga0307405_10002659
288 Ga0307410_10018030
289 Ga0307406_10042751
290 Ga0307406_10189001
291 Ga0307406_10190271
292 Ga0307409_100004523
293 Ga0307409_100098281
294 Ga0307416_100000172
295 Ga0307415_100000043
296 Ga0307415_100201237
297 Ga0307507_10007411
298 Ga0307510_10078908
299 Ga0373951_0000239
300 Ga0373935_0006307
301 Ga0495643_0005367
302 Ga0495622_0069322
303 Ga0495683_0085183
304 Ga0495681_0032926
305 Ga0495686_0038111
306 Ga0496103_0023036
307 Ga0496104_0012468
308 Ga0496105_0078456
309 Ga0496107_0168146
310 Ga0496108_0011064
311 Ga0496108_0040216
312 Ga0496109_0030151
313 Ga0496109_0067403
314 Ga0496109_0075304
315 Ga0496111_0011906
316 Ga0496111_0023490
317 Ga0496112_0003649
318 Ga0496112_0018083
319 Ga0496112_0109723
320 Ga0501046_0091269
321 nmdc:mga05p37_124388_c1
322 nmdc:mga05p37_76820_c1
323 nmdc:mga05p37_7829_c1
324 nmdc:mga09592_151754_c1
325 nmdc:mga09592_43577_c1
326 nmdc:mga0qj67_63481_c1
327 nmdc:mga06r32_35230_c1
328 nmdc:mga06r32_53966_c1
329 nmdc:mga06r32_82496_c1
330 nmdc:mga06r32_90479_c1
331 Ga0500646_0000180
332 Ga0500646_0003640
333 Ga0500646_0004416
334 Ga0500583_0031702
335 Ga0500583_0047719
336 Ga0500560_000696
337 Ga0500573_0002284
338 Ga0500588_0001116
339 Ga0500616_0000243
340 Ga0500633_0002507
341 Ga0500634_0018188
342 2515854468
343 2623585851
344 2644404834
345 2671834262
346 2676486915
347 2753075514
348 2753268557
349 2772644058
350 2772645188
351 2774852418
352 2795794887
353 2861526342
354 2867372587
355 2870725052
356 2891398771
357 2918508649
358 2935393928
359 3002999034
360 8001782914
361 8001784140
362 8025538059
363 8053953091
364 8055175836

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

341

455

0.98

PF12704

MacB_PCD

MacB-like periplasmic core domain

94

333

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.7607 60 250
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.7572 60 250
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.6821 49 262
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.6661 49 262
5ws4-assembly1.cif.gz_B crystal structure of tripartite-type abc transporter macb from acinetobacter baumannii 0.6583 23 374
ID Description Score Start End Superfamily
1pieA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;GHMP kinase, C-terminal domain 0.6713 215 249 3.30.70.890
af_Q4DAT0_3_98_3.30.70.330 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain 0.5651 208 252 3.30.70.330
af_O77313_2_84_2.40.40.20 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.5551 140 221 2.40.40.20
af_Q57582_14_129_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.5439 61 249 3.30.70.120
af_Q9VT38_56_192_3.30.70.330 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain 0.5178 212 262 3.30.70.330
ID Description Score Start End GO Terms
AF-A0A428X6E4-F1-model_v4 AB hydrolase-1 domain-containing protein 0.9564 100 223 GO:0016787
AF-A0A6B2XQT4-F1-model_v4 ABC transporter permease 0.9552 66 188
AF-A0A6G2UT69-F1-model_v4 ABC transporter permease 0.9014 32 259
AF-A0A6B2XQT4-F1-model_v4 ABC transporter permease 0.8855 66 188
AF-A0A382C9B5-F1-model_v4 ABC3 transporter permease C-terminal domain-containing protein 0.8771 52 344 GO:0005886
GO:0022857

Map