F279250
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 182 | 131 | 182 | 279 |
Family's Representative Sequence
| Representative Sequence | 3300025927|Ga0207687_10010194|Ga0207687_100101946 |
| Length | 306 |
| Sequence | MLARECMHAFPSERLRIMVSMNRLSTEKRAQIIGCLVEGNSIRATVRMTGAAKNTITKLLVDLGEACAEYQDGVLVDLPCKVIEADEIWSYCYSKQKNVPEQFKGTPGYGDVWTFTAICADTKLVPSWLVGERTMDDAEVFLTDLASRMTKRIQLSTDGHRIYEGTVGPSFAHNVDWAQIQKQYASAVELGKYSPPVCTGTKRRVLKGDPDPDRISTSYVERQNLTMRMGMRRFTRLTNGFSRKIENLSHAVSLHFMHYNFARPHQSLKERYSRTPAMAAGVTDHIWSLEEIAELLDQPAPSKAFQ |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Metagenome | Rhizosphere |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300002074 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 | Metagenome | Rhizosphere |
| 4 | 3300002239 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 | Metagenome | Rhizosphere |
| 5 | 3300002244 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 | Metagenome | Rhizosphere |
| 6 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 7 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 9 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 19 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 24 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 25 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 28 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 29 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 31 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 32 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 33 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 34 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 35 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 75 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 76 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 77 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 78 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 79 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 80 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 81 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 82 | 3300041501 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG | Metagenome | Unclassified |
| 83 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 84 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 85 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 105 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 106 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 107 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 108 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 109 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 110 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 112 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 113 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 114 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 115 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 116 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 117 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 118 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 119 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 122 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 124 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 125 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 126 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.75 |
| Nodule | 0 |
| Rhizoplane | 13.74 |
| Rhizosphere | 81.32 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.2 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24746J21847_1000016 | 3300001977 | Bacteria | 16017 |
| 2 | JGI24740J21852_10003419 | 3300001979 | Bacteria | 6984 |
| 3 | JGI24748J21848_1000376 | 3300002074 | Bacteria | 5084 |
| 4 | JGI24034J26672_10000423 | 3300002239 | Bacteria | 5479 |
| 5 | JGI24742J22300_10000769 | 3300002244 | Bacteria | 4880 |
| 6 | Ga0070683_100001231 | 3300005329 | Bacteria | 19475 |
| 7 | Ga0070683_100155556 | 3300005329 | Bacteria | 2168 |
| 8 | Ga0070670_100019574 | 3300005331 | Bacteria | 5810 |
| 9 | Ga0068868_100010800 | 3300005338 | Bacteria | 6624 |
| 10 | Ga0070660_100004607 | 3300005339 | Bacteria | 9542 |
| 11 | Ga0070689_100092932 | 3300005340 | Bacteria | 2380 |
| 12 | Ga0070659_100000080 | 3300005366 | Bacteria | 73366 |
| 13 | Ga0070667_100046266 | 3300005367 | Unclassified | 3660 |
| 14 | Ga0070714_100000242 | 3300005435 | Bacteria | 42641 |
| 15 | Ga0070714_100025907 | 3300005435 | Bacteria | 4843 |
| 16 | Ga0070710_10000019 | 3300005437 | Bacteria | 88049 |
| 17 | Ga0070705_100006058 | 3300005440 | Bacteria | 5919 |
| 18 | Ga0070662_100000001 | 3300005457 | Bacteria | 317995 |
| 19 | Ga0070681_10020475 | 3300005458 | Bacteria | 6630 |
| 20 | Ga0068867_100002668 | 3300005459 | Bacteria | 12591 |
| 21 | Ga0070706_100066325 | 3300005467 | Bacteria | 3339 |
| 22 | Ga0070679_100000134 | 3300005530 | Bacteria | 59591 |
| 23 | Ga0070684_100012710 | 3300005535 | Bacteria | 6757 |
| 24 | Ga0070684_100037869 | 3300005535 | Bacteria | 4140 |
| 25 | Ga0070665_100000022 | 3300005548 | Bacteria | 379286 |
| 26 | Ga0070665_100001252 | 3300005548 | Bacteria | 30657 |
| 27 | Ga0068851_10001421 | 3300005834 | Bacteria | 10480 |
| 28 | Ga0068858_100000763 | 3300005842 | Bacteria | 33724 |
| 29 | Ga0070717_10000004 | 3300006028 | Bacteria | 365525 |
| 30 | Ga0070717_10000017 | 3300006028 | Bacteria | 205340 |
| 31 | Ga0070717_10000069 | 3300006028 | Bacteria | 86039 |
| 32 | Ga0070715_10000008 | 3300006163 | Bacteria | 189899 |
| 33 | Ga0070712_100000009 | 3300006175 | Bacteria | 143615 |
| 34 | Ga0075367_10027810 | 3300006178 | Bacteria | 3221 |
| 35 | Ga0097621_100013240 | 3300006237 | Bacteria | 6141 |
| 36 | Ga0068871_100157364 | 3300006358 | Unclassified | 1941 |
| 37 | Ga0075430_100159313 | 3300006846 | Unclassified | 1879 |
| 38 | Ga0075433_10047830 | 3300006852 | Unclassified | 3720 |
| 39 | Ga0075429_100005232 | 3300006880 | Bacteria | 11163 |
| 40 | Ga0075429_100013976 | 3300006880 | Bacteria | 6959 |
| 41 | Ga0068865_100000089 | 3300006881 | Bacteria | 47955 |
| 42 | Ga0105240_10003271 | 3300009093 | Bacteria | 25337 |
| 43 | Ga0105240_10036587 | 3300009093 | Bacteria | 6312 |
| 44 | Ga0105240_10179181 | 3300009093 | Bacteria | 2503 |
| 45 | Ga0105245_10000022 | 3300009098 | Bacteria | 181225 |
| 46 | Ga0105245_10000735 | 3300009098 | Bacteria | 29523 |
| 47 | Ga0105245_10002937 | 3300009098 | Bacteria | 15306 |
| 48 | Ga0105245_10016927 | 3300009098 | Bacteria | 6365 |
| 49 | Ga0105247_10317112 | 3300009101 | Bacteria | 1086 |
| 50 | Ga0105242_10014414 | 3300009176 | Bacteria | 6125 |
| 51 | Ga0105248_10080542 | 3300009177 | Bacteria | 3660 |
| 52 | Ga0105248_10242662 | 3300009177 | Bacteria | 2028 |
| 53 | Ga0105237_10001559 | 3300009545 | Bacteria | 29890 |
| 54 | Ga0105249_10000763 | 3300009553 | Bacteria | 28922 |
| 55 | Ga0105239_10040823 | 3300010375 | Bacteria | 5085 |
| 56 | Ga0105239_10050905 | 3300010375 | Bacteria | 4542 |
| 57 | Ga0105239_10067454 | 3300010375 | Bacteria | 3930 |
| 58 | Ga0105246_10006285 | 3300011119 | Bacteria | 7248 |
| 59 | Ga0157373_10332343 | 3300013100 | Bacteria | 1082 |
| 60 | Ga0157370_10006777 | 3300013104 | Bacteria | 12567 |
| 61 | Ga0157370_10138291 | 3300013104 | Unclassified | 2269 |
| 62 | Ga0157370_10527753 | 3300013104 | Bacteria | 1083 |
| 63 | Ga0157369_10000068 | 3300013105 | Bacteria | 144274 |
| 64 | Ga0157369_10072566 | 3300013105 | Bacteria | 3695 |
| 65 | Ga0157375_10000677 | 3300013308 | Bacteria | 30168 |
| 66 | Ga0157380_10286790 | 3300014326 | Bacteria | 1509 |
| 67 | Ga0163161_10000064 | 3300017792 | Bacteria | 108508 |
| 68 | Ga0207656_10003203 | 3300025321 | Bacteria | 5596 |
| 69 | Ga0207692_10000004 | 3300025898 | Bacteria | 413600 |
| 70 | Ga0207685_10000012 | 3300025905 | Bacteria | 189900 |
| 71 | Ga0207707_10065578 | 3300025912 | Bacteria | 3163 |
| 72 | Ga0207695_10007999 | 3300025913 | Bacteria | 13318 |
| 73 | Ga0207695_10113117 | 3300025913 | Bacteria | 2691 |
| 74 | Ga0207671_10000459 | 3300025914 | Bacteria | 55921 |
| 75 | Ga0207671_10000776 | 3300025914 | Bacteria | 40505 |
| 76 | Ga0207671_10000801 | 3300025914 | Bacteria | 39861 |
| 77 | Ga0207671_10001178 | 3300025914 | Bacteria | 31111 |
| 78 | Ga0207693_10000101 | 3300025915 | Bacteria | 76993 |
| 79 | Ga0207657_10010696 | 3300025919 | Bacteria | 9138 |
| 80 | Ga0207652_10025081 | 3300025921 | Bacteria | 4955 |
| 81 | Ga0207687_10001123 | 3300025927 | Bacteria | 18222 |
| 82 | Ga0207687_10001519 | 3300025927 | Bacteria | 15898 |
| 83 | Ga0207687_10001806 | 3300025927 | Bacteria | 14723 |
| 84 | Ga0207687_10010194 | 3300025927 | Bacteria | 6139 |
| 85 | Ga0207664_10000105 | 3300025929 | Bacteria | 75519 |
| 86 | Ga0207664_10107574 | 3300025929 | Bacteria | 2314 |
| 87 | Ga0207690_10000126 | 3300025932 | Bacteria | 63035 |
| 88 | Ga0207706_10000003 | 3300025933 | Bacteria | 345011 |
| 89 | Ga0207670_10072428 | 3300025936 | Bacteria | 2386 |
| 90 | Ga0207704_10000018 | 3300025938 | Bacteria | 153994 |
| 91 | Ga0207661_10000714 | 3300025944 | Bacteria | 21578 |
| 92 | Ga0207661_10024583 | 3300025944 | Bacteria | 4567 |
| 93 | Ga0207712_10001183 | 3300025961 | Bacteria | 18055 |
| 94 | Ga0207658_10051448 | 3300025986 | Unclassified | 3036 |
| 95 | Ga0207677_10020333 | 3300026023 | Bacteria | 4029 |
| 96 | Ga0207703_10000070 | 3300026035 | Bacteria | 123480 |
| 97 | Ga0207708_10020875 | 3300026075 | Bacteria | 4942 |
| 98 | Ga0207702_10002891 | 3300026078 | Bacteria | 16062 |
| 99 | Ga0207648_10001799 | 3300026089 | Bacteria | 23490 |
| 100 | Ga0268266_10000029 | 3300028379 | Bacteria | 424015 |
| 101 | Ga0268266_10000428 | 3300028379 | Bacteria | 63292 |
| 102 | Ga0265326_10000003 | 3300028558 | Bacteria | 479811 |
| 103 | Ga0265319_1000030 | 3300028563 | Bacteria | 129742 |
| 104 | Ga0265319_1011919 | 3300028563 | Bacteria | 3536 |
| 105 | Ga0265334_10001282 | 3300028573 | Bacteria | 12157 |
| 106 | Ga0265338_10000156 | 3300028800 | Bacteria | 125065 |
| 107 | Ga0265338_10000844 | 3300028800 | Bacteria | 51666 |
| 108 | Ga0265324_10008359 | 3300029957 | Bacteria | 4114 |
| 109 | Ga0265325_10105708 | 3300031241 | Bacteria | 1373 |
| 110 | Ga0307510_10077983 | 3300033180 | Bacteria | 3244 |
| 111 | Ga0373937_0034244 | 3300036401 | Bacteria | 4620 |
| 112 | Ga0451845_0520814 | 3300041501 | Bacteria | 1571 |
| 113 | Ga0466963_0000128 | 3300044694 | Bacteria | 28762 |
| 114 | Ga0466963_0573816 | 3300044694 | Bacteria | 797 |
| 115 | Ga0453684_0493922 | 3300044712 | Bacteria | 1356 |
| 116 | Ga0495603_0144056 | 3300046455 | Unclassified | 1386 |
| 117 | Ga0495630_0000027 | 3300046517 | Bacteria | 146589 |
| 118 | Ga0495643_0093231 | 3300046522 | Unclassified | 1551 |
| 119 | Ga0495640_0020353 | 3300046533 | Unclassified | 4885 |
| 120 | Ga0495640_0030025 | 3300046533 | Bacteria | 3896 |
| 121 | Ga0495625_0000204 | 3300046660 | Bacteria | 94356 |
| 122 | Ga0495588_0000180 | 3300046674 | Bacteria | 76700 |
| 123 | Ga0495657_0004649 | 3300046675 | Bacteria | 10949 |
| 124 | Ga0495647_0000002 | 3300046681 | Bacteria | 174959 |
| 125 | Ga0495647_0004207 | 3300046681 | Bacteria | 4660 |
| 126 | Ga0495669_0002194 | 3300046684 | Bacteria | 8013 |
| 127 | Ga0495613_0000041 | 3300046689 | Bacteria | 130784 |
| 128 | Ga0495624_0187041 | 3300046690 | Bacteria | 1260 |
| 129 | Ga0495670_0005824 | 3300046691 | Bacteria | 6037 |
| 130 | Ga0495649_0001942 | 3300046694 | Bacteria | 15048 |
| 131 | Ga0495600_0124003 | 3300046809 | Bacteria | 1680 |
| 132 | Ga0495604_0027317 | 3300047317 | Bacteria | 4540 |
| 133 | Ga0495604_0081294 | 3300047317 | Bacteria | 2426 |
| 134 | Ga0495674_0000042 | 3300047319 | Bacteria | 94820 |
| 135 | Ga0495674_0000589 | 3300047319 | Bacteria | 34001 |
| 136 | Ga0495676_0157759 | 3300047321 | Unclassified | 1608 |
| 137 | Ga0495680_0000113 | 3300047322 | Bacteria | 76525 |
| 138 | Ga0495680_0000332 | 3300047322 | Bacteria | 52925 |
| 139 | Ga0495602_0000038 | 3300048088 | Bacteria | 130758 |
| 140 | Ga0495602_0301050 | 3300048088 | Unclassified | 1173 |
| 141 | Ga0496100_0000003 | 3300048903 | Bacteria | 360802 |
| 142 | Ga0496100_0003231 | 3300048903 | Bacteria | 8463 |
| 143 | Ga0496100_0005520 | 3300048903 | Bacteria | 6825 |
| 144 | Ga0496101_0000003 | 3300048904 | Bacteria | 406565 |
| 145 | Ga0496104_0000007 | 3300048907 | Bacteria | 524804 |
| 146 | Ga0496105_0000002 | 3300048908 | Bacteria | 753215 |
| 147 | Ga0496106_0000015 | 3300048909 | Bacteria | 187570 |
| 148 | Ga0496107_0000008 | 3300048910 | Bacteria | 251874 |
| 149 | Ga0496108_0000004 | 3300048911 | Bacteria | 545055 |
| 150 | Ga0496108_0005715 | 3300048911 | Bacteria | 10069 |
| 151 | Ga0496109_0000031 | 3300048912 | Bacteria | 163998 |
| 152 | Ga0496110_0004876 | 3300048913 | Bacteria | 10466 |
| 153 | Ga0496112_0000003 | 3300048915 | Bacteria | 660147 |
| 154 | Ga0496112_0000308 | 3300048915 | Bacteria | 31586 |
| 155 | Ga0496112_0181228 | 3300048915 | Bacteria | 2070 |
| 156 | Ga0496113_0000002 | 3300048916 | Bacteria | 220193 |
| 157 | Ga0496113_0009718 | 3300048916 | Bacteria | 6321 |
| 158 | Ga0496114_0033523 | 3300048917 | Bacteria | 4232 |
| 159 | Ga0496114_0036697 | 3300048917 | Bacteria | 4052 |
| 160 | Ga0496115_0000035 | 3300048918 | Bacteria | 134475 |
| 161 | Ga0496115_0000370 | 3300048918 | Bacteria | 37274 |
| 162 | Ga0496115_0000385 | 3300048918 | Bacteria | 36453 |
| 163 | Ga0496115_0001011 | 3300048918 | Bacteria | 20397 |
| 164 | Ga0496115_0015665 | 3300048918 | Bacteria | 5756 |
| 165 | Ga0496115_0166648 | 3300048918 | Bacteria | 1822 |
| 166 | Ga0496125_0108863 | 3300048928 | Bacteria | 2014 |
| 167 | Ga0496126_0042054 | 3300048929 | Bacteria | 4223 |
| 168 | Ga0501031_0065839 | 3300049568 | Bacteria | 2361 |
| 169 | Ga0501039_0216436 | 3300049575 | Bacteria | 1506 |
| 170 | Ga0501042_0292140 | 3300049578 | Unclassified | 1177 |
| 171 | Ga0501070_0068028 | 3300049586 | Unclassified | 2949 |
| 172 | nmdc:mga03n38_103475_c1 | 3300050490 | Bacteria | 1376 |
| 173 | nmdc:mga03n38_200348_c1 | 3300050490 | Bacteria | 1033 |
| 174 | nmdc:mga06z11_580_c3 | 3300050494 | Bacteria | 10856 |
| 175 | nmdc:mga07m45_6687_c1 | 3300050496 | Bacteria | 5848 |
| 176 | nmdc:mga09592_7671_c1 | 3300050508 | Bacteria | 8772 |
| 177 | nmdc:mga0qj67_290730_c1 | 3300050509 | Unclassified | 1020 |
| 178 | nmdc:mga0a205_10929_c1 | 3300050515 | Bacteria | 8351 |
| 179 | Ga0495601_0003327 | 3300053077 | Bacteria | 9199 |
| 180 | Ga0495612_0000076 | 3300053078 | Bacteria | 44649 |
| 181 | Ga0495612_0002996 | 3300053078 | Bacteria | 7012 |
| 182 | Ga0495595_0004489 | 3300053084 | Bacteria | 5616 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300006880 | Ga0075429_100005232 | Ga0075429_10000523216 | 232 |
| 2 | 3300050508 | nmdc:mga09592_7671_c1 | nmdc:mga09592_7671_c1_1884_2603 | 232 |
| 3 | 3300041501 | Ga0451845_0520814 | Ga0451845_0520814_798_1538 | 245 |
| 4 | 3300044694 | Ga0466963_0573816 | Ga0466963_0573816_29_787 | 249 |
| 5 | 3300047321 | Ga0495676_0157759 | Ga0495676_0157759_226_978 | 249 |
| 6 | 3300050490 | nmdc:mga03n38_200348_c1 | nmdc:mga03n38_200348_c1_51_830 | 254 |
| 7 | 3300050494 | nmdc:mga06z11_580_c3 | nmdc:mga06z11_580_c3_516_1295 | 254 |
| 8 | 3300050496 | nmdc:mga07m45_6687_c1 | nmdc:mga07m45_6687_c1_4944_5723 | 254 |
| 9 | 3300009545 | Ga0105237_10001559 | Ga0105237_100015594 | 255 |
| 10 | 3300025914 | Ga0207671_10000459 | Ga0207671_1000045926 | 255 |
| 11 | 3300025914 | Ga0207671_10000776 | Ga0207671_1000077628 | 255 |
| 12 | 3300025914 | Ga0207671_10000801 | Ga0207671_100008018 | 255 |
| 13 | 3300025914 | Ga0207671_10001178 | Ga0207671_1000117828 | 255 |
| 14 | 3300049568 | Ga0501031_0065839 | Ga0501031_0065839_195_1004 | 262 |
| 15 | 3300048915 | Ga0496112_0000308 | Ga0496112_0000308_16758_17591 | 271 |
| 16 | 3300009093 | Ga0105240_10003271 | Ga0105240_100032717 | 272 |
| 17 | 3300009093 | Ga0105240_10036587 | Ga0105240_1003658715 | 272 |
| 18 | 3300009093 | Ga0105240_10179181 | Ga0105240_101791812 | 272 |
| 19 | 3300009101 | Ga0105247_10317112 | Ga0105247_103171121 | 272 |
| 20 | 3300025913 | Ga0207695_10007999 | Ga0207695_100079996 | 272 |
| 21 | 3300033180 | Ga0307510_10077983 | Ga0307510_100779833 | 272 |
| 22 | 3300044712 | Ga0453684_0493922 | Ga0453684_0493922_429_1310 | 272 |
| 23 | 3300046809 | Ga0495600_0124003 | Ga0495600_0124003_517_1347 | 272 |
| 24 | 3300048903 | Ga0496100_0003231 | Ga0496100_0003231_5926_6750 | 272 |
| 25 | 3300048918 | Ga0496115_0000035 | Ga0496115_0000035_37981_38814 | 272 |
| 26 | 3300048918 | Ga0496115_0000370 | Ga0496115_0000370_30793_31617 | 272 |
| 27 | 3300048918 | Ga0496115_0000385 | Ga0496115_0000385_30036_30860 | 272 |
| 28 | 3300049575 | Ga0501039_0216436 | Ga0501039_0216436_325_1239 | 272 |
| 29 | 3300006178 | Ga0075367_10027810 | Ga0075367_100278103 | 273 |
| 30 | 3300006028 | Ga0070717_10000004 | Ga0070717_10000004208 | 274 |
| 31 | 3300006880 | Ga0075429_100013976 | Ga0075429_1000139762 | 274 |
| 32 | 3300028558 | Ga0265326_10000003 | Ga0265326_1000000345 | 274 |
| 33 | 3300028563 | Ga0265319_1011919 | Ga0265319_10119194 | 274 |
| 34 | 3300028573 | Ga0265334_10001282 | Ga0265334_1000128211 | 274 |
| 35 | 3300028800 | Ga0265338_10000844 | Ga0265338_1000084428 | 274 |
| 36 | 3300029957 | Ga0265324_10008359 | Ga0265324_100083593 | 274 |
| 37 | 3300005339 | Ga0070660_100004607 | Ga0070660_1000046073 | 275 |
| 38 | 3300005366 | Ga0070659_100000080 | Ga0070659_10000008048 | 275 |
| 39 | 3300005435 | Ga0070714_100000242 | Ga0070714_10000024237 | 275 |
| 40 | 3300005435 | Ga0070714_100025907 | Ga0070714_1000259075 | 275 |
| 41 | 3300005437 | Ga0070710_10000019 | Ga0070710_1000001942 | 275 |
| 42 | 3300005467 | Ga0070706_100066325 | Ga0070706_1000663253 | 275 |
| 43 | 3300006028 | Ga0070717_10000069 | Ga0070717_1000006936 | 275 |
| 44 | 3300009553 | Ga0105249_10000763 | Ga0105249_1000076323 | 275 |
| 45 | 3300011119 | Ga0105246_10006285 | Ga0105246_100062854 | 275 |
| 46 | 3300013308 | Ga0157375_10000677 | Ga0157375_1000067718 | 275 |
| 47 | 3300025898 | Ga0207692_10000004 | Ga0207692_1000000441 | 275 |
| 48 | 3300025913 | Ga0207695_10113117 | Ga0207695_101131171 | 275 |
| 49 | 3300025919 | Ga0207657_10010696 | Ga0207657_100106962 | 275 |
| 50 | 3300025929 | Ga0207664_10000105 | Ga0207664_1000010540 | 275 |
| 51 | 3300025929 | Ga0207664_10107574 | Ga0207664_101075744 | 275 |
| 52 | 3300025932 | Ga0207690_10000126 | Ga0207690_1000012624 | 275 |
| 53 | 3300025961 | Ga0207712_10001183 | Ga0207712_100011837 | 275 |
| 54 | 3300005329 | Ga0070683_100001231 | Ga0070683_10000123114 | 276 |
| 55 | 3300005331 | Ga0070670_100019574 | Ga0070670_1000195747 | 276 |
| 56 | 3300005459 | Ga0068867_100002668 | Ga0068867_10000266814 | 276 |
| 57 | 3300005535 | Ga0070684_100012710 | Ga0070684_1000127105 | 276 |
| 58 | 3300006163 | Ga0070715_10000008 | Ga0070715_10000008106 | 276 |
| 59 | 3300006237 | Ga0097621_100013240 | Ga0097621_1000132404 | 276 |
| 60 | 3300006358 | Ga0068871_100157364 | Ga0068871_1001573642 | 276 |
| 61 | 3300009098 | Ga0105245_10000022 | Ga0105245_1000002284 | 276 |
| 62 | 3300009098 | Ga0105245_10000735 | Ga0105245_1000073514 | 276 |
| 63 | 3300009098 | Ga0105245_10002937 | Ga0105245_1000293714 | 276 |
| 64 | 3300009098 | Ga0105245_10016927 | Ga0105245_100169276 | 276 |
| 65 | 3300009176 | Ga0105242_10014414 | Ga0105242_100144147 | 276 |
| 66 | 3300009177 | Ga0105248_10080542 | Ga0105248_100805423 | 276 |
| 67 | 3300009177 | Ga0105248_10242662 | Ga0105248_102426622 | 276 |
| 68 | 3300010375 | Ga0105239_10040823 | Ga0105239_100408238 | 276 |
| 69 | 3300010375 | Ga0105239_10050905 | Ga0105239_100509053 | 276 |
| 70 | 3300010375 | Ga0105239_10067454 | Ga0105239_100674544 | 276 |
| 71 | 3300013100 | Ga0157373_10332343 | Ga0157373_103323432 | 276 |
| 72 | 3300013104 | Ga0157370_10006777 | Ga0157370_1000677710 | 276 |
| 73 | 3300013105 | Ga0157369_10000068 | Ga0157369_1000006856 | 276 |
| 74 | 3300013105 | Ga0157369_10072566 | Ga0157369_100725663 | 276 |
| 75 | 3300014326 | Ga0157380_10286790 | Ga0157380_102867901 | 276 |
| 76 | 3300025905 | Ga0207685_10000012 | Ga0207685_10000012106 | 276 |
| 77 | 3300025927 | Ga0207687_10001806 | Ga0207687_1000180611 | 276 |
| 78 | 3300025944 | Ga0207661_10000714 | Ga0207661_1000071414 | 276 |
| 79 | 3300026023 | Ga0207677_10020333 | Ga0207677_100203332 | 276 |
| 80 | 3300026089 | Ga0207648_10001799 | Ga0207648_1000179912 | 276 |
| 81 | 3300028563 | Ga0265319_1000030 | Ga0265319_1000030132 | 276 |
| 82 | 3300028800 | Ga0265338_10000156 | Ga0265338_10000156131 | 276 |
| 83 | 3300036401 | Ga0373937_0034244 | Ga0373937_0034244_3275_4108 | 276 |
| 84 | 3300044694 | Ga0466963_0000128 | Ga0466963_0000128_19089_19922 | 276 |
| 85 | 3300046455 | Ga0495603_0144056 | Ga0495603_0144056_381_1223 | 276 |
| 86 | 3300046517 | Ga0495630_0000027 | Ga0495630_0000027_35001_35837 | 276 |
| 87 | 3300046522 | Ga0495643_0093231 | Ga0495643_0093231_532_1365 | 276 |
| 88 | 3300046533 | Ga0495640_0030025 | Ga0495640_0030025_2001_2834 | 276 |
| 89 | 3300046674 | Ga0495588_0000180 | Ga0495588_0000180_47182_48018 | 276 |
| 90 | 3300046681 | Ga0495647_0000002 | Ga0495647_0000002_73169_74008 | 276 |
| 91 | 3300046681 | Ga0495647_0004207 | Ga0495647_0004207_286_1119 | 276 |
| 92 | 3300046684 | Ga0495669_0002194 | Ga0495669_0002194_3866_4699 | 276 |
| 93 | 3300046689 | Ga0495613_0000041 | Ga0495613_0000041_89363_90196 | 276 |
| 94 | 3300046691 | Ga0495670_0005824 | Ga0495670_0005824_3690_4523 | 276 |
| 95 | 3300046694 | Ga0495649_0001942 | Ga0495649_0001942_12153_12986 | 276 |
| 96 | 3300047317 | Ga0495604_0027317 | Ga0495604_0027317_2529_3365 | 276 |
| 97 | 3300047317 | Ga0495604_0081294 | Ga0495604_0081294_1237_2070 | 276 |
| 98 | 3300047319 | Ga0495674_0000042 | Ga0495674_0000042_62938_63771 | 276 |
| 99 | 3300047322 | Ga0495680_0000113 | Ga0495680_0000113_49546_50379 | 276 |
| 100 | 3300047322 | Ga0495680_0000332 | Ga0495680_0000332_16819_17652 | 276 |
| 101 | 3300048088 | Ga0495602_0000038 | Ga0495602_0000038_100127_100963 | 276 |
| 102 | 3300048088 | Ga0495602_0301050 | Ga0495602_0301050_191_1027 | 276 |
| 103 | 3300048903 | Ga0496100_0000003 | Ga0496100_0000003_157069_157902 | 276 |
| 104 | 3300048903 | Ga0496100_0005520 | Ga0496100_0005520_1588_2424 | 276 |
| 105 | 3300048904 | Ga0496101_0000003 | Ga0496101_0000003_157069_157902 | 276 |
| 106 | 3300048907 | Ga0496104_0000007 | Ga0496104_0000007_343704_344537 | 276 |
| 107 | 3300048908 | Ga0496105_0000002 | Ga0496105_0000002_546643_547476 | 276 |
| 108 | 3300048909 | Ga0496106_0000015 | Ga0496106_0000015_104675_105508 | 276 |
| 109 | 3300048910 | Ga0496107_0000008 | Ga0496107_0000008_48129_48962 | 276 |
| 110 | 3300048911 | Ga0496108_0000004 | Ga0496108_0000004_166516_167349 | 276 |
| 111 | 3300048912 | Ga0496109_0000031 | Ga0496109_0000031_12729_13562 | 276 |
| 112 | 3300048913 | Ga0496110_0004876 | Ga0496110_0004876_4773_5606 | 276 |
| 113 | 3300048915 | Ga0496112_0000003 | Ga0496112_0000003_615348_616181 | 276 |
| 114 | 3300048915 | Ga0496112_0181228 | Ga0496112_0181228_286_1122 | 276 |
| 115 | 3300048916 | Ga0496113_0000002 | Ga0496113_0000002_128953_129789 | 276 |
| 116 | 3300048917 | Ga0496114_0033523 | Ga0496114_0033523_1113_1946 | 276 |
| 117 | 3300048917 | Ga0496114_0036697 | Ga0496114_0036697_2043_2882 | 276 |
| 118 | 3300048918 | Ga0496115_0001011 | Ga0496115_0001011_18388_19227 | 276 |
| 119 | 3300048918 | Ga0496115_0015665 | Ga0496115_0015665_603_1436 | 276 |
| 120 | 3300048918 | Ga0496115_0166648 | Ga0496115_0166648_847_1683 | 276 |
| 121 | 3300048928 | Ga0496125_0108863 | Ga0496125_0108863_302_1135 | 276 |
| 122 | 3300048929 | Ga0496126_0042054 | Ga0496126_0042054_2160_2996 | 276 |
| 123 | 3300049578 | Ga0501042_0292140 | Ga0501042_0292140_137_970 | 276 |
| 124 | 3300049586 | Ga0501070_0068028 | Ga0501070_0068028_865_1701 | 276 |
| 125 | 3300050490 | nmdc:mga03n38_103475_c1 | nmdc:mga03n38_103475_c1_15_893 | 276 |
| 126 | 3300050509 | nmdc:mga0qj67_290730_c1 | nmdc:mga0qj67_290730_c1_140_970 | 276 |
| 127 | 3300053077 | Ga0495601_0003327 | Ga0495601_0003327_4500_5336 | 276 |
| 128 | 3300053078 | Ga0495612_0000076 | Ga0495612_0000076_36836_37672 | 276 |
| 129 | 3300053078 | Ga0495612_0002996 | Ga0495612_0002996_747_1583 | 276 |
| 130 | 3300053084 | Ga0495595_0004489 | Ga0495595_0004489_3948_4784 | 276 |
| 131 | 3300006175 | Ga0070712_100000009 | Ga0070712_10000000997 | 278 |
| 132 | 3300025915 | Ga0207693_10000101 | Ga0207693_1000010172 | 278 |
| 133 | 3300001979 | JGI24740J21852_10003419 | JGI24740J21852_1000341913 | 279 |
| 134 | 3300005329 | Ga0070683_100155556 | Ga0070683_1001555561 | 279 |
| 135 | 3300005338 | Ga0068868_100010800 | Ga0068868_1000108007 | 279 |
| 136 | 3300005340 | Ga0070689_100092932 | Ga0070689_1000929322 | 279 |
| 137 | 3300005367 | Ga0070667_100046266 | Ga0070667_1000462662 | 279 |
| 138 | 3300005440 | Ga0070705_100006058 | Ga0070705_1000060586 | 279 |
| 139 | 3300005457 | Ga0070662_100000001 | Ga0070662_100000001144 | 279 |
| 140 | 3300005458 | Ga0070681_10020475 | Ga0070681_100204758 | 279 |
| 141 | 3300005530 | Ga0070679_100000134 | Ga0070679_10000013421 | 279 |
| 142 | 3300005535 | Ga0070684_100037869 | Ga0070684_1000378694 | 279 |
| 143 | 3300005834 | Ga0068851_10001421 | Ga0068851_100014214 | 279 |
| 144 | 3300006028 | Ga0070717_10000017 | Ga0070717_10000017184 | 279 |
| 145 | 3300006846 | Ga0075430_100159313 | Ga0075430_1001593132 | 279 |
| 146 | 3300006852 | Ga0075433_10047830 | Ga0075433_100478302 | 279 |
| 147 | 3300006881 | Ga0068865_100000089 | Ga0068865_10000008921 | 279 |
| 148 | 3300013104 | Ga0157370_10138291 | Ga0157370_101382911 | 279 |
| 149 | 3300025321 | Ga0207656_10003203 | Ga0207656_100032032 | 279 |
| 150 | 3300025912 | Ga0207707_10065578 | Ga0207707_100655782 | 279 |
| 151 | 3300025921 | Ga0207652_10025081 | Ga0207652_100250815 | 279 |
| 152 | 3300025927 | Ga0207687_10001123 | Ga0207687_1000112316 | 279 |
| 153 | 3300025927 | Ga0207687_10001519 | Ga0207687_1000151913 | 279 |
| 154 | 3300025933 | Ga0207706_10000003 | Ga0207706_10000003184 | 279 |
| 155 | 3300025936 | Ga0207670_10072428 | Ga0207670_100724282 | 279 |
| 156 | 3300025938 | Ga0207704_10000018 | Ga0207704_10000018118 | 279 |
| 157 | 3300025944 | Ga0207661_10024583 | Ga0207661_100245838 | 279 |
| 158 | 3300025986 | Ga0207658_10051448 | Ga0207658_100514482 | 279 |
| 159 | 3300026075 | Ga0207708_10020875 | Ga0207708_100208754 | 279 |
| 160 | 3300026078 | Ga0207702_10002891 | Ga0207702_100028918 | 279 |
| 161 | 3300031241 | Ga0265325_10105708 | Ga0265325_101057083 | 279 |
| 162 | 3300046533 | Ga0495640_0020353 | Ga0495640_0020353_2010_2855 | 279 |
| 163 | 3300046660 | Ga0495625_0000204 | Ga0495625_0000204_15275_16117 | 279 |
| 164 | 3300046675 | Ga0495657_0004649 | Ga0495657_0004649_9234_10076 | 279 |
| 165 | 3300046690 | Ga0495624_0187041 | Ga0495624_0187041_405_1250 | 279 |
| 166 | 3300047319 | Ga0495674_0000589 | Ga0495674_0000589_30282_31127 | 279 |
| 167 | 3300048911 | Ga0496108_0005715 | Ga0496108_0005715_6372_7211 | 279 |
| 168 | 3300048916 | Ga0496113_0009718 | Ga0496113_0009718_2147_2986 | 279 |
| 169 | 3300050515 | nmdc:mga0a205_10929_c1 | nmdc:mga0a205_10929_c1_1429_2268 | 279 |
| 170 | 3300005548 | Ga0070665_100000022 | Ga0070665_100000022287 | 280 |
| 171 | 3300005842 | Ga0068858_100000763 | Ga0068858_10000076321 | 280 |
| 172 | 3300026035 | Ga0207703_10000070 | Ga0207703_1000007046 | 280 |
| 173 | 3300028379 | Ga0268266_10000029 | Ga0268266_10000029167 | 280 |
| 174 | 3300002074 | JGI24748J21848_1000376 | JGI24748J21848_10003766 | 282 |
| 175 | 3300002239 | JGI24034J26672_10000423 | JGI24034J26672_100004236 | 282 |
| 176 | 3300002244 | JGI24742J22300_10000769 | JGI24742J22300_100007695 | 282 |
| 177 | 3300001977 | JGI24746J21847_1000016 | JGI24746J21847_100001614 | 283 |
| 178 | 3300005548 | Ga0070665_100001252 | Ga0070665_10000125216 | 283 |
| 179 | 3300013104 | Ga0157370_10527753 | Ga0157370_105277531 | 283 |
| 180 | 3300017792 | Ga0163161_10000064 | Ga0163161_1000006444 | 283 |
| 181 | 3300025927 | Ga0207687_10010194 | Ga0207687_100101946 | 283 |
| 182 | 3300028379 | Ga0268266_10000428 | Ga0268266_1000042852 | 283 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6pax-assembly1.cif.gz_A | crystal structure of the human pax-6 paired domain-dna complex reveals a general model for pax protein-dna interactions | 0.8616 | 3 | 47 |
| 1pdn-assembly1.cif.gz_C | crystal structure of a paired domain-dna complex at 2.5 angstroms resolution reveals structural basis for pax developmental mutations | 0.8567 | 3 | 47 |
| 1bl3-assembly1.cif.gz_A | catalytic domain of hiv-1 integrase | 0.7567 | 69 | 164 |
| 3wnh-assembly1.cif.gz_A | cyclic hexapeptide pkzdnv in complex with hiv-1 integrase | 0.7552 | 69 | 164 |
| 3wng-assembly1.cif.gz_A | cyclic hexapeptide pkidnp in complex with hiv-1 integrase | 0.7505 | 69 | 164 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q20551_91_164_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9153 | 7 | 47 | 1.10.10.10 |
| af_Q21972_79_144_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9068 | 7 | 45 | 1.10.10.10 |
| af_P24610_34_102_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.8888 | 5 | 47 | 1.10.10.10 |
| 1tc3C00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.8778 | 9 | 43 | 1.10.10.60 |
| 6paxA01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.8616 | 3 | 47 | 1.10.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4R6Y8D1-F1-model_v4 | Transposase | 0.9844 | 8 | 137 |
|
| AF-A0A2X0SKH1-F1-model_v4 | Transposase | 0.9788 | 8 | 144 |
|
| AF-A0A2H6FX93-F1-model_v4 | Uncharacterized protein | 0.9712 | 21 | 128 |
|
| AF-A0A2V8KD56-F1-model_v4 | IS1 family transposase | 0.9702 | 8 | 137 |
|
| AF-A0A2V9Q592-F1-model_v4 | IS1 family transposase | 0.9664 | 8 | 137 |
|
Predicted Structure (AlphaFold2)
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