F279079

General Info

Members Datasets Scaffolds Average Seq Length
182 142 159 888

Family's Representative Sequence

Representative Sequence 3300009176|Ga0105242_10013939|Ga0105242_100139393
Length 938
Sequence MRPLAPAPPALDDPTTPRLVLRDGTVATVRRSTADDRDAMRLFFHELSPESRRRRFFTAAEPTDALVERLCDSADGRRNLTLVAVRQTGTETRFIAVGSYFATSDGTAEAAFAVDDRFQGKGLGTELLERLAALAANHGFQRFDATTLVDNHGMLEVFRDSGFELRSKSSPGVVDVALTLQPTADGVISSERRHRLATVASLRPLLEPRAVAVVGASRQAGSIGGRVLGALLSTGFTGPVYPVNPAATEIAGQRVYASMRDVPAGVDLAVIAVPHDRVPGVVDDCAAAGVKSLVIITAGYAEVGDEGRARQHALVEQVRGYGMRMVGPNCMGILNANPALRLNASFSPLFPSPGHVGLSSQSGALGLAIIALAGQRGIGLSTFVSVGNKADVSSNDLLEYWEDDPATRVILLYLESFGNPRRFARLARRLGRTKPIVAVKAGRTRGGSRAAGSHTAALAANDIAVDALFHQTGAIRADTIAEMFDVAACLEAQPLPAGRRVAIVTNAGGPGILAVDACESAGLIVAPFPPATRAALAAFLPQAASTGNPVDMVASAGPDEYRRAIEIALADAGTDALLVIYAPVDAAQSEATIAAIRQGIVNGRAAGAASKTILACVMGDAGRPHPFQADGEQIPAYAFPENAIRALAKAAAYAEWRAQPPGLLWGFDDVYPEEARQICRGALETRGDTWLTDEEMRRVLNSFRLPLVASAVARTAEDAVASACLLGFPVAAKIRSDRVQHKTDIGGVCLNLQDAAAVQRAFDEIVARAKAAGLDADADGVLIQPMLTSGVETMIGISADPLFGPLIGFGLGGVYVELMADMGFRIAPLTDRDADELIHTIRGFKRLEGYRGQPRLTSMRCATCCCGFRGLPTKFQRSSSSISIQSSPCRTGMAAASWTHASRSGPPARKRSPRCPCRDPDPAPVDFRHALIGGTGRR

Samples

Sample ID Description Type Environment
1 2527291627 Frankia casuarinae Thr Isolate Nodule
2 2527291629 Frankia sp. BMG5.23 Isolate Nodule
3 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
4 2576861822 Frankia sp. CeD Isolate Nodule
5 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
6 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
7 2619618881 Frankia sp. ACN1ag Isolate Unclassified
8 2619619003 Frankia sp. CpI1-P Isolate Nodule
9 2626541554 Frankia sp. AvcI.1 Isolate Nodule
10 2684623036 Frankia sp. CgIM4 Isolate Nodule
11 2710264753 Frankia sp. KB5 Isolate Nodule
12 2773857924 Frankia sp. CgIS1 Isolate Nodule
13 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
14 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
15 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
16 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
17 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
18 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
19 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
20 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
21 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
68 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
69 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
70 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
80 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
81 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
82 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
83 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
84 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
85 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
86 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
87 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
88 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
92 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
93 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
94 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
97 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
100 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
110 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
111 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
120 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
140 637000116 Frankia casuarinae CcI3 Isolate Nodule
141 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
142 8054913762 Frankia gtarii Agncl-10 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.81
Metatranscriptomes 0.55
Isolates 12.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 5.49
Rhizoplane 4.4
Rhizosphere 80.77
Stem 0
Stem Tuber 0.55
Unclassified 8.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100032760 3300005338 Bacteria 3999
2 Ga0070668_100001338 3300005347 Bacteria 17603
3 Ga0070714_100054121 3300005435 Bacteria 3428
4 Ga0070711_100000003 3300005439 Bacteria 192172
5 Ga0070663_100005880 3300005455 Bacteria 7336
6 Ga0068867_100011172 3300005459 Bacteria 6335
7 Ga0068867_100018453 3300005459 Bacteria 4960
8 Ga0070707_100004842 3300005468 Bacteria 12613
9 Ga0070698_100011977 3300005471 Bacteria 9200
10 Ga0070684_100021043 3300005535 Bacteria 5420
11 Ga0070665_100002598 3300005548 Bacteria 19719
12 Ga0070665_100008888 3300005548 Bacteria 10174
13 Ga0068857_100049307 3300005577 Bacteria 3736
14 Ga0068858_100026290 3300005842 Bacteria 5411
15 Ga0081455_10000093 3300005937 Bacteria 97067
16 Ga0081455_10000721 3300005937 Bacteria 42889
17 Ga0081538_10005079 3300005981 Bacteria 11955
18 Ga0081538_10007848 3300005981 Bacteria 9153
19 Ga0097621_100006703 3300006237 Bacteria 8185
20 Ga0068871_100001155 3300006358 Bacteria 17728
21 Ga0068871_100001758 3300006358 Bacteria 14599
22 Ga0075428_100002604 3300006844 Bacteria 19618
23 Ga0075428_100016380 3300006844 Bacteria 8191
24 Ga0075428_100091951 3300006844 Bacteria 3308
25 Ga0075430_100007061 3300006846 Bacteria 9470
26 Ga0075431_100010717 3300006847 Bacteria 9212
27 Ga0075431_100014944 3300006847 Bacteria 7860
28 Ga0075431_100028257 3300006847 Bacteria 5760
29 Ga0075433_10009662 3300006852 Bacteria 7720
30 Ga0075429_100007391 3300006880 Bacteria 9537
31 Ga0068865_100000259 3300006881 Bacteria 29371
32 Ga0075436_100000587 3300006914 Bacteria 23807
33 Ga0075436_100011822 3300006914 Bacteria 5990
34 Ga0111539_10000313 3300009094 Bacteria 59049
35 Ga0111539_10050535 3300009094 Bacteria 4953
36 Ga0105245_10005484 3300009098 Bacteria 11143
37 Ga0105247_10000014 3300009101 Bacteria 285043
38 Ga0105247_10002022 3300009101 Bacteria 14047
39 Ga0114129_10007155 3300009147 Bacteria 15877
40 Ga0114129_10023722 3300009147 Bacteria 8697
41 Ga0114129_10034527 3300009147 Bacteria 7144
42 Ga0105242_10008428 3300009176 Bacteria 7923
43 Ga0105242_10013939 3300009176 Bacteria 6220
44 Ga0105248_10001088 3300009177 Bacteria 30070
45 Ga0105248_10024166 3300009177 Bacteria 6754
46 Ga0157378_10003054 3300013297 Bacteria 14879
47 Ga0157375_10040722 3300013308 Bacteria 4481
48 Ga0163163_10002224 3300014325 Bacteria 16330
49 Ga0163163_10022964 3300014325 Bacteria 5915
50 Ga0157376_10004154 3300014969 Bacteria 10036
51 Ga0157376_10024922 3300014969 Bacteria 4705
52 Ga0207710_10000031 3300025900 Bacteria 285157
53 Ga0207693_10004697 3300025915 Bacteria 11493
54 Ga0207663_10000006 3300025916 Bacteria 253740
55 Ga0207646_10002764 3300025922 Bacteria 20494
56 Ga0207706_10032654 3300025933 Unclassified 4634
57 Ga0207706_10043030 3300025933 Bacteria 4002
58 Ga0207686_10001303 3300025934 Bacteria 14292
59 Ga0207686_10011678 3300025934 Bacteria 4817
60 Ga0207711_10002299 3300025941 Bacteria 17138
61 Ga0207689_10063791 3300025942 Bacteria 3031
62 Ga0207703_10005246 3300026035 Bacteria 10451
63 Ga0207678_10001774 3300026067 Bacteria 19744
64 Ga0207641_10022068 3300026088 Bacteria 5237
65 Ga0207648_10024633 3300026089 Bacteria 5368
66 Ga0207676_10003441 3300026095 Bacteria 11198
67 Ga0207428_10003037 3300027907 Bacteria 16518
68 Ga0265319_1001148 3300028563 Bacteria 16438
69 Ga0307515_10041045 3300028794 Bacteria 7292
70 Ga0265316_10008006 3300031344 Bacteria 9867
71 Ga0265316_10009059 3300031344 Bacteria 9173
72 Ga0307408_100026106 3300031548 Bacteria 4007
73 Ga0316576_10017421 3300031727 Bacteria 4879
74 Ga0307413_10004953 3300031824 Bacteria 5871
75 Ga0307518_10000905 3300031838 Bacteria 22093
76 Ga0307409_100001355 3300031995 Bacteria 11919
77 Ga0307416_100000356 3300032002 Bacteria 23741
78 Ga0307415_100000553 3300032126 Bacteria 16385
79 Ga0316593_10002247 3300032168 Bacteria 4524
80 Ga0307507_10006378 3300033179 Bacteria 18163
81 Ga0373926_0003738 3300035083 Bacteria 4954
82 Ga0373923_0002294 3300035111 Bacteria 5843
83 Ga0373945_0001194 3300035116 Bacteria 7897
84 Ga0373943_0004376 3300035170 Bacteria 6404
85 Ga0373946_0000569 3300035171 Bacteria 12183
86 Ga0373924_0003555 3300035410 Bacteria 5367
87 Ga0373935_0002045 3300035692 Bacteria 11415
88 Ga0316582_0006668 3300036647 Bacteria 6090
89 Ga0316582_0012258 3300036647 Bacteria 4775
90 Ga0316582_0014775 3300036647 Unclassified 4443
91 Ga0316581_0002224 3300037588 Bacteria 4593
92 Ga0466967_0010712 3300045976 Bacteria 6893
93 Ga0495592_0023245 3300046454 Bacteria 4715
94 Ga0495639_0000464 3300046475 Bacteria 19302
95 Ga0495630_0004764 3300046517 Bacteria 9518
96 Ga0495666_0003337 3300046526 Bacteria 8105
97 Ga0495634_0008489 3300046642 Bacteria 7641
98 Ga0495635_0003415 3300046663 Bacteria 10980
99 Ga0495647_0000212 3300046681 Bacteria 15653
100 Ga0495658_0027917 3300046683 Bacteria 3042
101 Ga0495613_0008496 3300046689 Bacteria 7620
102 Ga0495624_0000732 3300046690 Bacteria 25830
103 Ga0495676_0016507 3300047321 Bacteria 6549
104 Ga0495676_0044398 3300047321 Bacteria 3628
105 Ga0495680_0020050 3300047322 Bacteria 5634
106 Ga0495684_0027644 3300047471 Bacteria 4356
107 Ga0495593_0012923 3300047673 Bacteria 4768
108 Ga0496108_0006980 3300048911 Bacteria 9142
109 Ga0496109_0009724 3300048912 Bacteria 8209
110 Ga0496109_0050297 3300048912 Bacteria 3796
111 Ga0496110_0001833 3300048913 Bacteria 15669
112 Ga0496111_0010191 3300048914 Bacteria 6295
113 Ga0496112_0011604 3300048915 Bacteria 8057
114 Ga0496113_0001681 3300048916 Bacteria 12533
115 Ga0496119_0000373 3300048922 Bacteria 61923
116 Ga0496120_0000156 3300048923 Bacteria 112926
117 Ga0501036_0017291 3300049572 Bacteria 6026
118 Ga0501036_0035926 3300049572 Bacteria 4192
119 Ga0501038_0029715 3300049574 Bacteria 4840
120 Ga0501038_0068174 3300049574 Bacteria 3025
121 Ga0501039_0047567 3300049575 Bacteria 3315
122 Ga0501040_0009466 3300049576 Bacteria 6355
123 Ga0501040_0014577 3300049576 Bacteria 5183
124 Ga0501040_0027476 3300049576 Bacteria 3832
125 Ga0501041_0006454 3300049577 Bacteria 6865
126 Ga0501047_0064171 3300049581 Bacteria 3542
127 Ga0501048_0016674 3300049582 Bacteria 5416
128 Ga0501071_0000845 3300049587 Bacteria 16406
129 Ga0501071_0011467 3300049587 Bacteria 5972
130 Ga0501072_0002869 3300049588 Bacteria 12953
131 Ga0501072_0020331 3300049588 Bacteria 5142
132 Ga0501074_0000170 3300049590 Bacteria 34950
133 Ga0501074_0003176 3300049590 Bacteria 11591
134 Ga0501075_0000292 3300049591 Bacteria 27866
135 Ga0501075_0010803 3300049591 Bacteria 6432
136 Ga0501076_0010481 3300049592 Bacteria 6880
137 Ga0501076_0042994 3300049592 Bacteria 3559
138 Ga0501077_0017256 3300049593 Bacteria 4553
139 Ga0501077_0033571 3300049593 Bacteria 3266
140 Ga0501079_0001292 3300049741 Bacteria 17618
141 Ga0501079_0008221 3300049741 Bacteria 7908
142 Ga0501081_0004725 3300049743 Bacteria 8757
143 Ga0501083_0020415 3300049744 Bacteria 4609
144 Ga0501045_0000425 3300049824 Bacteria 25783
145 Ga0501045_0005818 3300049824 Bacteria 8537
146 nmdc:mga05p37_78532_c1 3300050507 Bacteria 4064
147 nmdc:mga05p37_9846_c1 3300050507 Bacteria 11345
148 nmdc:mga0qj67_821_c1 3300050509 Bacteria 21232
149 nmdc:mga06r32_10015_c1 3300050510 Bacteria 8553
150 nmdc:mga08y16_11151_c1 3300050511 Bacteria 9439
151 nmdc:mga08y16_41552_c1 3300050511 Bacteria 4817
152 nmdc:mga0n895_4983_c1 3300050512 Bacteria 11020
153 nmdc:mga08x19_13786_c1 3300050514 Bacteria 4895
154 nmdc:mga08x19_45_c1 3300050514 Bacteria 147507
155 nmdc:mga0a205_15636_c1 3300050515 Bacteria 7092
156 Ga0495619_0007569 3300053085 Bacteria 6875
157 Ga0501084_0000186 3300054114 Bacteria 48306
158 Ga0501082_0014273 3300060353 Bacteria 6836
159 Ga0530510_0014261 3300061734 Bacteria 5603

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_0010712 Ga0466967_0010712_3410_5896 800
2 3300005937 Ga0081455_10000721 Ga0081455_1000072124 807
3 3300005459 Ga0068867_100018453 Ga0068867_1000184533 809
4 3300006237 Ga0097621_100006703 Ga0097621_1000067037 809
5 3300006358 Ga0068871_100001155 Ga0068871_1000011558 809
6 3300009176 Ga0105242_10008428 Ga0105242_100084282 818
7 3300014969 Ga0157376_10024922 Ga0157376_100249222 818
8 3300025934 Ga0207686_10011678 Ga0207686_100116782 818
9 iso_pu_bacteria 2891395885 2891401020 818
10 3300049581 Ga0501047_0064171 Ga0501047_0064171_44_2794 821
11 iso_pu_bacteria 2527291627 2528203787 829
12 iso_pu_bacteria 2527291629 2528213508 829
13 iso_pu_bacteria 2546825537 2546948083 829
14 iso_pu_bacteria 2576861822 2579748795 829
15 iso_pu_bacteria 2684623036 2686541676 829
16 iso_pu_bacteria 2710264753 2710604260 829
17 iso_pu_bacteria 2773857924 2774864697 829
18 iso_pu_bacteria 637000116 637880824 829
19 3300025942 Ga0207689_10063791 Ga0207689_100637912 832
20 3300009101 Ga0105247_10000014 Ga0105247_1000001474 835
21 3300014325 Ga0163163_10022964 Ga0163163_100229643 835
22 3300025900 Ga0207710_10000031 Ga0207710_10000031156 835
23 3300048922 Ga0496119_0000373 Ga0496119_0000373_11631_14288 835
24 3300048923 Ga0496120_0000156 Ga0496120_0000156_98629_101286 835
25 iso_pu_bacteria 2579778521 2579853108 835
26 iso_pu_bacteria 2619618881 2619855885 835
27 iso_pu_bacteria 2619619003 2620348327 835
28 iso_pu_bacteria 2626541554 2626635376 835
29 iso_pu_bacteria 8054913762 8054915350 835
30 iso_pu_bacteria 2917736166 2917741783 838
31 3300005535 Ga0070684_100021043 Ga0070684_1000210434 841
32 3300005577 Ga0068857_100049307 Ga0068857_1000493071 841
33 3300013308 Ga0157375_10040722 Ga0157375_100407222 841
34 3300025933 Ga0207706_10032654 Ga0207706_100326542 841
35 3300048911 Ga0496108_0006980 Ga0496108_0006980_4839_7460 841
36 3300048912 Ga0496109_0009724 Ga0496109_0009724_3405_6026 841
37 3300048913 Ga0496110_0001833 Ga0496110_0001833_2536_5157 841
38 3300048914 Ga0496111_0010191 Ga0496111_0010191_469_3090 841
39 3300005548 Ga0070665_100008888 Ga0070665_1000088884 847
40 3300049572 Ga0501036_0035926 Ga0501036_0035926_471_3197 855
41 3300049575 Ga0501039_0047567 Ga0501039_0047567_211_2937 855
42 3300049576 Ga0501040_0014577 Ga0501040_0014577_99_2825 855
43 3300049577 Ga0501041_0006454 Ga0501041_0006454_1782_4508 855
44 3300049582 Ga0501048_0016674 Ga0501048_0016674_468_3194 855
45 3300049587 Ga0501071_0011467 Ga0501071_0011467_892_3618 855
46 3300049588 Ga0501072_0020331 Ga0501072_0020331_2224_4950 855
47 3300049590 Ga0501074_0003176 Ga0501074_0003176_579_3305 855
48 3300049592 Ga0501076_0042994 Ga0501076_0042994_254_2980 855
49 3300049593 Ga0501077_0033571 Ga0501077_0033571_152_2878 855
50 3300049741 Ga0501079_0008221 Ga0501079_0008221_108_2834 855
51 3300049743 Ga0501081_0004725 Ga0501081_0004725_5587_8313 855
52 3300049744 Ga0501083_0020415 Ga0501083_0020415_564_3290 855
53 3300061734 Ga0530510_0014261 Ga0530510_0014261_534_3260 855
54 3300005435 Ga0070714_100054121 Ga0070714_1000541212 858
55 3300049590 Ga0501074_0000170 Ga0501074_0000170_4778_7558 858
56 3300031824 Ga0307413_10004953 Ga0307413_100049532 861
57 3300009094 Ga0111539_10000313 Ga0111539_1000031344 865
58 3300049574 Ga0501038_0068174 Ga0501038_0068174_263_2950 865
59 iso_pu_bacteria 2866612099 2866615047 867
60 3300027907 Ga0207428_10003037 Ga0207428_1000303715 868
61 3300050511 nmdc:mga08y16_11151_c1 nmdc:mga08y16_11151_c1_2689_5352 868
62 iso_pu_bacteria 8003314358 8003317922 868
63 3300033179 Ga0307507_10006378 Ga0307507_1000637810 869
64 3300005937 Ga0081455_10000093 Ga0081455_1000009363 871
65 3300049576 Ga0501040_0027476 Ga0501040_0027476_561_3224 871
66 3300005347 Ga0070668_100001338 Ga0070668_1000013384 872
67 3300005455 Ga0070663_100005880 Ga0070663_1000058802 872
68 3300005468 Ga0070707_100004842 Ga0070707_1000048427 872
69 3300025922 Ga0207646_10002764 Ga0207646_100027644 872
70 3300026067 Ga0207678_10001774 Ga0207678_1000177416 872
71 3300028794 Ga0307515_10041045 Ga0307515_100410452 872
72 iso_pu_bacteria 2585427649 2586062692 872
73 iso_pu_bacteria 2808606522 2809588132 873
74 iso_pu_bacteria 2915768154 2915773653 873
75 3300031838 Ga0307518_10000905 Ga0307518_100009059 874
76 iso_pu_bacteria 2891554331 2891562546 874
77 iso_pu_bacteria 2899359706 2899366906 874
78 iso_pu_bacteria 2899370129 2899372193 874
79 3300049824 Ga0501045_0005818 Ga0501045_0005818_1064_3829 875
80 3300031727 Ga0316576_10017421 Ga0316576_100174213 877
81 3300036647 Ga0316582_0012258 Ga0316582_0012258_35_2713 877
82 3300037588 Ga0316581_0002224 Ga0316581_0002224_1578_4256 877
83 3300046454 Ga0495592_0023245 Ga0495592_0023245_870_3536 877
84 3300049572 Ga0501036_0017291 Ga0501036_0017291_3218_5944 880
85 3300049574 Ga0501038_0029715 Ga0501038_0029715_369_3095 880
86 3300049576 Ga0501040_0009466 Ga0501040_0009466_2771_5497 880
87 3300049587 Ga0501071_0000845 Ga0501071_0000845_798_3524 880
88 3300049588 Ga0501072_0002869 Ga0501072_0002869_470_3196 880
89 3300049591 Ga0501075_0000292 Ga0501075_0000292_14804_17530 880
90 3300049592 Ga0501076_0010481 Ga0501076_0010481_2771_5497 880
91 3300049741 Ga0501079_0001292 Ga0501079_0001292_13278_16004 880
92 3300049824 Ga0501045_0000425 Ga0501045_0000425_16259_18985 880
93 3300060353 Ga0501082_0014273 Ga0501082_0014273_2771_5497 880
94 3300031548 Ga0307408_100026106 Ga0307408_1000261062 882
95 3300049593 Ga0501077_0017256 Ga0501077_0017256_177_2849 882
96 3300006844 Ga0075428_100002604 Ga0075428_1000026049 885
97 3300006847 Ga0075431_100010717 Ga0075431_1000107175 885
98 3300009147 Ga0114129_10007155 Ga0114129_100071555 885
99 3300050507 nmdc:mga05p37_78532_c1 nmdc:mga05p37_78532_c1_477_3176 885
100 3300005471 Ga0070698_100011977 Ga0070698_1000119772 887
101 3300031344 Ga0265316_10009059 Ga0265316_100090594 888
102 3300013297 Ga0157378_10003054 Ga0157378_1000305411 889
103 3300054114 Ga0501084_0000186 Ga0501084_0000186_55_2763 889
104 3300032168 Ga0316593_10002247 Ga0316593_100022473 892
105 3300006880 Ga0075429_100007391 Ga0075429_1000073915 895
106 3300009098 Ga0105245_10005484 Ga0105245_1000548410 895
107 3300009147 Ga0114129_10034527 Ga0114129_100345273 895
108 3300035083 Ga0373926_0003738 Ga0373926_0003738_1005_3695 895
109 3300035111 Ga0373923_0002294 Ga0373923_0002294_1740_4430 895
110 3300035116 Ga0373945_0001194 Ga0373945_0001194_1465_4155 895
111 3300035170 Ga0373943_0004376 Ga0373943_0004376_1500_4190 895
112 3300035171 Ga0373946_0000569 Ga0373946_0000569_2369_5059 895
113 3300035410 Ga0373924_0003555 Ga0373924_0003555_224_2914 895
114 3300035692 Ga0373935_0002045 Ga0373935_0002045_7431_10121 895
115 3300046475 Ga0495639_0000464 Ga0495639_0000464_16502_19192 895
116 3300046517 Ga0495630_0004764 Ga0495630_0004764_3361_6051 895
117 3300046526 Ga0495666_0003337 Ga0495666_0003337_3832_6522 895
118 3300046642 Ga0495634_0008489 Ga0495634_0008489_4538_7228 895
119 3300046663 Ga0495635_0003415 Ga0495635_0003415_813_3503 895
120 3300046681 Ga0495647_0000212 Ga0495647_0000212_2635_5325 895
121 3300046689 Ga0495613_0008496 Ga0495613_0008496_3985_6675 895
122 3300046690 Ga0495624_0000732 Ga0495624_0000732_18949_21639 895
123 3300047321 Ga0495676_0016507 Ga0495676_0016507_2215_4905 895
124 3300047321 Ga0495676_0044398 Ga0495676_0044398_883_3573 895
125 3300047322 Ga0495680_0020050 Ga0495680_0020050_2343_5033 895
126 3300047673 Ga0495593_0012923 Ga0495593_0012923_1133_3823 895
127 3300053085 Ga0495619_0007569 Ga0495619_0007569_4028_6718 895
128 3300006846 Ga0075430_100007061 Ga0075430_1000070616 896
129 3300006847 Ga0075431_100028257 Ga0075431_1000282572 896
130 3300050509 nmdc:mga0qj67_821_c1 nmdc:mga0qj67_821_c1_13165_15864 896
131 3300046683 Ga0495658_0027917 Ga0495658_0027917_60_2783 897
132 3300049591 Ga0501075_0010803 Ga0501075_0010803_2826_5564 898
133 3300005981 Ga0081538_10005079 Ga0081538_100050798 899
134 3300025915 Ga0207693_10004697 Ga0207693_100046975 900
135 3300028563 Ga0265319_1001148 Ga0265319_10011489 900
136 3300031344 Ga0265316_10008006 Ga0265316_100080062 900
137 3300036647 Ga0316582_0006668 Ga0316582_0006668_2480_5224 900
138 3300036647 Ga0316582_0014775 Ga0316582_0014775_989_3739 900
139 3300006358 Ga0068871_100001758 Ga0068871_1000017586 901
140 3300006852 Ga0075433_10009662 Ga0075433_100096626 901
141 3300009147 Ga0114129_10023722 Ga0114129_100237223 901
142 3300050507 nmdc:mga05p37_9846_c1 nmdc:mga05p37_9846_c1_2588_5374 901
143 3300050512 nmdc:mga0n895_4983_c1 nmdc:mga0n895_4983_c1_2598_5303 901
144 3300050515 nmdc:mga0a205_15636_c1 nmdc:mga0a205_15636_c1_2269_4974 901
145 3300005439 Ga0070711_100000003 Ga0070711_100000003110 903
146 3300006844 Ga0075428_100016380 Ga0075428_1000163802 903
147 3300006844 Ga0075428_100091951 Ga0075428_1000919511 903
148 3300006847 Ga0075431_100014944 Ga0075431_1000149446 903
149 3300006914 Ga0075436_100000587 Ga0075436_10000058711 903
150 3300006914 Ga0075436_100011822 Ga0075436_1000118222 903
151 3300009094 Ga0111539_10050535 Ga0111539_100505353 903
152 3300025916 Ga0207663_10000006 Ga0207663_10000006154 903
153 3300026089 Ga0207648_10024633 Ga0207648_100246334 903
154 3300047471 Ga0495684_0027644 Ga0495684_0027644_544_3276 903
155 3300050510 nmdc:mga06r32_10015_c1 nmdc:mga06r32_10015_c1_2362_5088 903
156 3300050511 nmdc:mga08y16_41552_c1 nmdc:mga08y16_41552_c1_494_3220 903
157 3300050514 nmdc:mga08x19_45_c1 nmdc:mga08x19_45_c1_93801_96554 903
158 3300025933 Ga0207706_10043030 Ga0207706_100430302 905
159 3300005842 Ga0068858_100026290 Ga0068858_1000262904 907
160 3300009101 Ga0105247_10002022 Ga0105247_1000202211 907
161 3300009177 Ga0105248_10001088 Ga0105248_100010882 907
162 3300014325 Ga0163163_10002224 Ga0163163_100022242 907
163 3300025941 Ga0207711_10002299 Ga0207711_1000229914 907
164 3300026035 Ga0207703_10005246 Ga0207703_100052465 907
165 3300026088 Ga0207641_10022068 Ga0207641_100220682 907
166 3300026095 Ga0207676_10003441 Ga0207676_100034415 907
167 3300048912 Ga0496109_0050297 Ga0496109_0050297_835_3558 907
168 3300048915 Ga0496112_0011604 Ga0496112_0011604_1832_4555 907
169 3300048916 Ga0496113_0001681 Ga0496113_0001681_1680_4403 907
170 3300050514 nmdc:mga08x19_13786_c1 nmdc:mga08x19_13786_c1_1782_4532 907
171 3300005981 Ga0081538_10007848 Ga0081538_100078486 909
172 3300005459 Ga0068867_100011172 Ga0068867_1000111722 910
173 3300006881 Ga0068865_100000259 Ga0068865_10000025921 910
174 3300025934 Ga0207686_10001303 Ga0207686_1000130310 910
175 3300031995 Ga0307409_100001355 Ga0307409_1000013557 910
176 3300032002 Ga0307416_100000356 Ga0307416_10000035618 910
177 3300032126 Ga0307415_100000553 Ga0307415_10000055318 910
178 3300009176 Ga0105242_10013939 Ga0105242_100139393 917
179 3300005338 Ga0068868_100032760 Ga0068868_1000327602 918
180 3300005548 Ga0070665_100002598 Ga0070665_1000025984 918
181 3300009177 Ga0105248_10024166 Ga0105248_100241662 918
182 3300014969 Ga0157376_10004154 Ga0157376_1000415410 918

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13607

Succ_CoA_lig

Succinyl-CoA ligase like flavodoxin domain

353

490

0.99

PF02629

CoA_binding

CoA binding domain

207

299

0.97

PF13549

ATP-grasp_5

ATP-grasp domain

682

871

0.97

PF13380

CoA_binding_2

CoA binding domain

209

336

0.96

PF19045

Ligase_CoA_2

Ligase-CoA domain

501

659

0.83

PF00583

Acetyltransf_1

Acetyltransferase (GNAT) family

44

163

0.78

PF13302

Acetyltransf_3

Acetyltransferase (GNAT) domain

18

164

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u5y-assembly1.cif.gz_A crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.9205 18 179
4xym-assembly1.cif.gz_B ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a synthetase 1 in complex with coenzyme a, ca-ampcp and hgcl+ 0.9165 675 904
4xz3-assembly1.cif.gz_D ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a synthetase 1 (se-met derivative) in complex with coenzyme a and mg-amppcp, phosphohistidine segment pointing towards nucleotide binding site 0.9095 675 904
2csu-assembly1.cif.gz_A crystal structure of ph0766 from pyrococcus horikoshii ot3 0.9078 202 659
3q9u-assembly2.cif.gz_B in silico and in vitro co-evolution of a high affinity complementary protein-protein interface 0.9064 209 295
ID Description Score Start End Superfamily
4xymA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9743 202 329 3.40.50.720
af_P76594_4_125_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.965 202 329 3.40.50.720
2csuB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9573 208 329 3.40.50.720
af_Q8IL89_36_165_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9522 201 329 3.40.50.720
4xymA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9449 202 329 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6B3ETD3-F1-model_v4 Acyl-CoA synthetase 0.9802 256 431
AF-A0A7J4P0J4-F1-model_v4 CoA-binding protein 0.9793 203 335
AF-A0A3M1HXW1-F1-model_v4 CoA-binding domain-containing protein 0.9784 202 329
AF-A0A7V5K5W9-F1-model_v4 CoA-binding domain-containing protein 0.9761 202 323
AF-A0A257SNV2-F1-model_v4 deleted 0.9733 202 357

Feature Viewer

pLDDT pTM Quality
89.34 0.87 High
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Predicted Structure (AlphaFold2)

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