F279050

General Info

Members Datasets Scaffolds Average Seq Length
182 115 364 434

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10040975|Ga0114129_100409753
Length 469
Sequence MGHATDELPYARMSRAAQREVSDHCRHNLWIVDIDVSPYARARYNHRVVSRQAVLLSGGGSMRDRVAMGVWRKIPWALLLPQMQDIEKLSSNFEKDNPNIDVKFVILPENELRDRVTADIATKGGQYDVVTIGTFEVPQWAKNSWIENLSSYTQKDSSYDVGDLIPAVSKALSYQDNLYAVPFYGESSFLMYRKDLFDKAGLKMPAQPTWDQVAQFAHKLNDPKKNQAGICLRGLPGWGELFAPLNTVANTYGGRWYDMNWNAKLTEAPFVQATQFYVDLVKSAGEPGAPNAGFTECLTSYSQGHAAMWYDATVAASLLEDPKSSKVVGKNGYAPAPVKDTDWSGWLPSDSKKKDAAWKFMSWATSKDYIKLVGTELGWARVPPGSRLSTYQIPEYKKAAAAFADLTVKAINEADINNAGTQPRPYIGVQYVGIPEFQSLGTAVAQEISAAIAGRQTVEQALEGGYKKG

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
20 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
31 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
41 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
42 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
43 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
44 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
47 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
48 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
49 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
50 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
54 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
56 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
59 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
60 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
61 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
62 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
68 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
69 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
70 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
71 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
72 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
73 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
74 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
75 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
76 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
77 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
78 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
81 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
82 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
83 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
86 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
88 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
89 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
90 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
91 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
92 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
97 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
98 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
99 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
100 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
101 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
102 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
103 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
104 2643221679 Angustibacter sp. Root456 Isolate Unclassified
105 2643221711 Terrabacter sp. Root85 Isolate Unclassified
106 2643221718 Rhizobium sp. Root268 Isolate Unclassified
107 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
108 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
109 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
110 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
111 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
112 2808606394 Promicromonospora sp. C35 Isolate Unclassified
113 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
114 2858868258 Micromonospora sp. MH33 Isolate Unclassified
115 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 86.26
Metatranscriptomes 3.85
Isolates 9.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.75
Nodule 0
Rhizoplane 13.74
Rhizosphere 64.84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10040975 3300009147 Bacteria 6526
2 JGI24739J22299_10037585 3300001989 Bacteria 1630
3 JGI25406J46586_10003901 3300003203 Bacteria 6973
4 Ga0006562J51391_1042004 3300003578 Bacteria 2450
5 Ga0065165_1001104 3300005262 Bacteria 32057
6 Ga0068869_100082922 3300005334 Bacteria 2397
7 Ga0070668_100000286 3300005347 Bacteria 33488
8 Ga0070668_100022689 3300005347 Bacteria 4745
9 Ga0070669_100074599 3300005353 Bacteria 2515
10 Ga0070706_100039345 3300005467 Bacteria 4366
11 Ga0070706_100065850 3300005467 Bacteria 3352
12 Ga0070698_100027939 3300005471 Bacteria 5861
13 Ga0070665_100000349 3300005548 Bacteria 69493
14 Ga0068864_100266082 3300005618 Bacteria 1596
15 Ga0081538_10011141 3300005981 Bacteria 7308
16 Ga0081540_1018970 3300005983 Bacteria 4200
17 Ga0081539_10000664 3300005985 Bacteria 69034
18 Ga0081539_10003496 3300005985 Bacteria 19196
19 Ga0081539_10006927 3300005985 Bacteria 10553
20 Ga0081539_10010056 3300005985 Bacteria 7778
21 Ga0070717_10126536 3300006028 Bacteria 2194
22 Ga0070715_10012572 3300006163 Bacteria 3085
23 Ga0075434_100077297 3300006871 Bacteria 3324
24 Ga0075435_100016457 3300007076 Bacteria 5576
25 Ga0105247_10071990 3300009101 Bacteria 2163
26 Ga0105243_10187300 3300009148 Bacteria 1805
27 Ga0105248_10000104 3300009177 Bacteria 94431
28 Ga0105248_10230399 3300009177 Bacteria 2085
29 Ga0105238_10082359 3300009551 Bacteria 3208
30 Ga0105249_10014920 3300009553 Bacteria 6873
31 Ga0105239_10002326 3300010375 Bacteria 24252
32 Ga0157369_10018167 3300013105 Bacteria 7887
33 Ga0157378_10044906 3300013297 Bacteria 3925
34 Ga0163162_10055777 3300013306 Bacteria 3980
35 Ga0157372_10056480 3300013307 Bacteria 4386
36 Ga0157380_10175396 3300014326 Bacteria 1878
37 Ga0207685_10049810 3300025905 Bacteria 1611
38 Ga0207684_10173082 3300025910 Bacteria 1861
39 Ga0207681_10095240 3300025923 Bacteria 2135
40 Ga0207711_10000130 3300025941 Bacteria 79182
41 Ga0207712_10035469 3300025961 Bacteria 3389
42 Ga0207668_10000989 3300025972 Bacteria 17085
43 Ga0207668_10108340 3300025972 Bacteria 2079
44 Ga0207676_10220499 3300026095 Bacteria 1689
45 Ga0268266_10000092 3300028379 Bacteria 192109
46 Ga0268264_10068531 3300028381 Bacteria 2998
47 Ga0307517_10000875 3300028786 Bacteria 51286
48 Ga0307517_10035058 3300028786 Bacteria 5692
49 Ga0307517_10066576 3300028786 Bacteria 3312
50 Ga0307515_10001167 3300028794 Bacteria 60067
51 Ga0307515_10032604 3300028794 Bacteria 8621
52 Ga0307512_10025839 3300030522 Bacteria 5195
53 Ga0307513_10016871 3300031456 Bacteria 8784
54 Ga0307513_10032933 3300031456 Bacteria 5835
55 Ga0307513_10036141 3300031456 Bacteria 5517
56 Ga0307513_10043869 3300031456 Bacteria 4906
57 Ga0307513_10053382 3300031456 Bacteria 4345
58 Ga0307509_10008977 3300031507 Bacteria 12602
59 Ga0307508_10002281 3300031616 Bacteria 20405
60 Ga0307508_10003754 3300031616 Bacteria 15184
61 Ga0316579_10024811 3300031691 Bacteria 2702
62 Ga0316576_10142124 3300031727 Bacteria 1807
63 Ga0307516_10007306 3300031730 Bacteria 12712
64 Ga0307516_10023438 3300031730 Bacteria 6327
65 Ga0307516_10028679 3300031730 Bacteria 5631
66 Ga0307406_10010378 3300031901 Bacteria 5252
67 Ga0307406_10044562 3300031901 Bacteria 2781
68 Ga0307407_10098491 3300031903 Bacteria 1809
69 Ga0307409_100041685 3300031995 Bacteria 3431
70 Ga0307409_100217776 3300031995 Bacteria 1721
71 Ga0307415_100224958 3300032126 Bacteria 1507
72 Ga0316585_10018899 3300032137 Bacteria 2096
73 Ga0316592_1012342 3300033524 Bacteria 1750
74 Ga0316586_1006092 3300033527 Bacteria 1723
75 Ga0316586_1009137 3300033527 Bacteria 1480
76 Ga0316588_1016919 3300033528 Bacteria 1620
77 Ga0316596_1005380 3300033541 Bacteria 2923
78 Ga0316596_1019848 3300033541 Bacteria 1707
79 Ga0373941_0002812 3300035115 Bacteria 3873
80 Ga0373942_0000198 3300035207 Bacteria 15469
81 Ga0316574_0002503 3300035398 Bacteria 9225
82 Ga0316582_0011719 3300036647 Bacteria 4860
83 Ga0395899_0005080 3300037312 Bacteria 10238
84 Ga0395899_0013439 3300037312 Bacteria 6263
85 Ga0395899_0014963 3300037312 Bacteria 5918
86 Ga0395899_0055201 3300037312 Bacteria 2939
87 Ga0395899_0078789 3300037312 Bacteria 2401
88 Ga0395899_0086250 3300037312 Bacteria 2280
89 Ga0395900_0002241 3300037418 Bacteria 21515
90 Ga0395900_0015086 3300037418 Bacteria 7877
91 Ga0395900_0023964 3300037418 Bacteria 6244
92 Ga0395900_0035259 3300037418 Bacteria 5153
93 Ga0395900_0037689 3300037418 Bacteria 4984
94 Ga0395900_0050740 3300037418 Bacteria 4273
95 Ga0395900_0179924 3300037418 Bacteria 2149
96 Ga0395900_0193567 3300037418 Bacteria 2061
97 Ga0395898_0005058 3300037466 Bacteria 14297
98 Ga0395898_0007984 3300037466 Bacteria 11228
99 Ga0395898_0008507 3300037466 Bacteria 10843
100 Ga0395898_0033398 3300037466 Bacteria 5135
101 Ga0395898_0033512 3300037466 Bacteria 5124
102 Ga0395898_0058715 3300037466 Bacteria 3744
103 Ga0395898_0089185 3300037466 Bacteria 2968
104 Ga0395905_0000231 3300037471 Bacteria 84714
105 Ga0395905_0008436 3300037471 Bacteria 10159
106 Ga0395905_0055483 3300037471 Bacteria 3707
107 Ga0395905_0056414 3300037471 Bacteria 3675
108 Ga0395905_0174729 3300037471 Bacteria 2017
109 Ga0395901_0002943 3300038443 Bacteria 17186
110 Ga0395901_0003353 3300038443 Bacteria 16141
111 Ga0395901_0006795 3300038443 Bacteria 11559
112 Ga0395901_0018238 3300038443 Bacteria 7165
113 Ga0395901_0019954 3300038443 Bacteria 6857
114 Ga0395901_0027943 3300038443 Bacteria 5801
115 Ga0395901_0048803 3300038443 Bacteria 4397
116 Ga0395901_0127068 3300038443 Bacteria 2679
117 Ga0395901_0168111 3300038443 Bacteria 2301
118 Ga0395901_0222536 3300038443 Bacteria 1972
119 Ga0439457_009146 3300042014 Bacteria 2313
120 Ga0466970_0099879 3300044765 Bacteria 1580
121 Ga0466960_0050041 3300044901 Bacteria 2013
122 Ga0495605_0075225 3300046474 Bacteria 1588
123 Ga0496100_0010467 3300048903 Bacteria 5250
124 Ga0496101_0010655 3300048904 Bacteria 6075
125 Ga0496101_0041106 3300048904 Bacteria 3295
126 Ga0496102_0020480 3300048905 Bacteria 5845
127 Ga0496103_0026410 3300048906 Bacteria 3515
128 Ga0496104_0005559 3300048907 Bacteria 11038
129 Ga0496104_0036157 3300048907 Bacteria 4615
130 Ga0496104_0085408 3300048907 Bacteria 3012
131 Ga0496104_0126699 3300048907 Bacteria 2452
132 Ga0496105_0015529 3300048908 Bacteria 6070
133 Ga0496105_0016017 3300048908 Bacteria 5980
134 Ga0496106_0000502 3300048909 Bacteria 27728
135 Ga0496106_0021241 3300048909 Bacteria 4820
136 Ga0496107_0005378 3300048910 Bacteria 8762
137 Ga0496108_0002178 3300048911 Bacteria 15718
138 Ga0496108_0021176 3300048911 Bacteria 5344
139 Ga0496109_0019893 3300048912 Bacteria 5926
140 Ga0496109_0089190 3300048912 Bacteria 2851
141 Ga0496110_0012901 3300048913 Bacteria 6889
142 Ga0496110_0076946 3300048913 Bacteria 2967
143 Ga0496111_0005021 3300048914 Bacteria 8418
144 Ga0496111_0129184 3300048914 Bacteria 1869
145 Ga0496114_0003199 3300048917 Bacteria 12557
146 Ga0496114_0027656 3300048917 Bacteria 4647
147 Ga0496115_0107634 3300048918 Bacteria 2289
148 Ga0496118_0015167 3300048921 Bacteria 7155
149 Ga0501040_0139370 3300049576 Bacteria 1708
150 Ga0501072_0096991 3300049588 Bacteria 2343
151 Ga0501079_0067043 3300049741 Bacteria 2770
152 Ga0501081_0035777 3300049743 Bacteria 3382
153 Ga0501045_0181270 3300049824 Bacteria 1569
154 nmdc:mga0yw44_77998_c1 3300050492 Bacteria 2071
155 nmdc:mga04h51_19866_c1 3300050495 Bacteria 1997
156 nmdc:mga05p37_124408_c1 3300050507 Bacteria 3167
157 nmdc:mga05p37_59105_c1 3300050507 Bacteria 4722
158 nmdc:mga0n895_134137_c1 3300050512 Bacteria 2502
159 nmdc:mga0n895_40038_c1 3300050512 Bacteria 4551
160 nmdc:mga0rr50_26369_c1 3300050513 Bacteria 4053
161 Ga0495655_0002428 3300053083 Bacteria 2964
162 Ga0495619_0007021 3300053085 Bacteria 7125
163 Ga0500641_0015804 3300053096 Bacteria 2807
164 Ga0500573_0014700 3300053140 Bacteria 4432
165 2623589138 2622736626 Bacteria 7181580
166 2643835606 2643221563 Bacteria 4726935
167 2644056532 2643221608 Bacteria 4724829
168 2644209233 2643221637 Bacteria 5345260
169 2644444223 2643221679 Bacteria 3839507
170 2644610232 2643221711 Bacteria 4865335
171 2644652735 2643221718 Bacteria 5345506
172 2686538266 2684623035 Bacteria 8032739
173 2738696580 2738541272 Bacteria 6848551
174 2738698163 2738541272 Bacteria 6848551
175 2739324310 2738543027 Bacteria 6409078
176 2739327934 2738543027 Bacteria 6409078
177 2739605516 2739367654 Bacteria 6049412
178 2760306968 2758568522 Bacteria 5953541
179 2809028750 2808606394 Bacteria 6248540
180 2819667614 2818991458 Bacteria 4794049
181 2858869911 2858868258 Bacteria 7683772
182 2906802039 2906799679 Bacteria 4031749
183 Ga0114129_10040975
184 JGI24739J22299_10037585
185 JGI25406J46586_10003901
186 Ga0006562J51391_1042004
187 Ga0065165_1001104
188 Ga0068869_100082922
189 Ga0070668_100000286
190 Ga0070668_100022689
191 Ga0070669_100074599
192 Ga0070706_100039345
193 Ga0070706_100065850
194 Ga0070698_100027939
195 Ga0070665_100000349
196 Ga0068864_100266082
197 Ga0081538_10011141
198 Ga0081540_1018970
199 Ga0081539_10000664
200 Ga0081539_10003496
201 Ga0081539_10006927
202 Ga0081539_10010056
203 Ga0070717_10126536
204 Ga0070715_10012572
205 Ga0075434_100077297
206 Ga0075435_100016457
207 Ga0105247_10071990
208 Ga0105243_10187300
209 Ga0105248_10000104
210 Ga0105248_10230399
211 Ga0105238_10082359
212 Ga0105249_10014920
213 Ga0105239_10002326
214 Ga0157369_10018167
215 Ga0157378_10044906
216 Ga0163162_10055777
217 Ga0157372_10056480
218 Ga0157380_10175396
219 Ga0207685_10049810
220 Ga0207684_10173082
221 Ga0207681_10095240
222 Ga0207711_10000130
223 Ga0207712_10035469
224 Ga0207668_10000989
225 Ga0207668_10108340
226 Ga0207676_10220499
227 Ga0268266_10000092
228 Ga0268264_10068531
229 Ga0307517_10000875
230 Ga0307517_10035058
231 Ga0307517_10066576
232 Ga0307515_10001167
233 Ga0307515_10032604
234 Ga0307512_10025839
235 Ga0307513_10016871
236 Ga0307513_10032933
237 Ga0307513_10036141
238 Ga0307513_10043869
239 Ga0307513_10053382
240 Ga0307509_10008977
241 Ga0307508_10002281
242 Ga0307508_10003754
243 Ga0316579_10024811
244 Ga0316576_10142124
245 Ga0307516_10007306
246 Ga0307516_10023438
247 Ga0307516_10028679
248 Ga0307406_10010378
249 Ga0307406_10044562
250 Ga0307407_10098491
251 Ga0307409_100041685
252 Ga0307409_100217776
253 Ga0307415_100224958
254 Ga0316585_10018899
255 Ga0316592_1012342
256 Ga0316586_1006092
257 Ga0316586_1009137
258 Ga0316588_1016919
259 Ga0316596_1005380
260 Ga0316596_1019848
261 Ga0373941_0002812
262 Ga0373942_0000198
263 Ga0316574_0002503
264 Ga0316582_0011719
265 Ga0395899_0005080
266 Ga0395899_0013439
267 Ga0395899_0014963
268 Ga0395899_0055201
269 Ga0395899_0078789
270 Ga0395899_0086250
271 Ga0395900_0002241
272 Ga0395900_0015086
273 Ga0395900_0023964
274 Ga0395900_0035259
275 Ga0395900_0037689
276 Ga0395900_0050740
277 Ga0395900_0179924
278 Ga0395900_0193567
279 Ga0395898_0005058
280 Ga0395898_0007984
281 Ga0395898_0008507
282 Ga0395898_0033398
283 Ga0395898_0033512
284 Ga0395898_0058715
285 Ga0395898_0089185
286 Ga0395905_0000231
287 Ga0395905_0008436
288 Ga0395905_0055483
289 Ga0395905_0056414
290 Ga0395905_0174729
291 Ga0395901_0002943
292 Ga0395901_0003353
293 Ga0395901_0006795
294 Ga0395901_0018238
295 Ga0395901_0019954
296 Ga0395901_0027943
297 Ga0395901_0048803
298 Ga0395901_0127068
299 Ga0395901_0168111
300 Ga0395901_0222536
301 Ga0439457_009146
302 Ga0466970_0099879
303 Ga0466960_0050041
304 Ga0495605_0075225
305 Ga0496100_0010467
306 Ga0496101_0010655
307 Ga0496101_0041106
308 Ga0496102_0020480
309 Ga0496103_0026410
310 Ga0496104_0005559
311 Ga0496104_0036157
312 Ga0496104_0085408
313 Ga0496104_0126699
314 Ga0496105_0015529
315 Ga0496105_0016017
316 Ga0496106_0000502
317 Ga0496106_0021241
318 Ga0496107_0005378
319 Ga0496108_0002178
320 Ga0496108_0021176
321 Ga0496109_0019893
322 Ga0496109_0089190
323 Ga0496110_0012901
324 Ga0496110_0076946
325 Ga0496111_0005021
326 Ga0496111_0129184
327 Ga0496114_0003199
328 Ga0496114_0027656
329 Ga0496115_0107634
330 Ga0496118_0015167
331 Ga0501040_0139370
332 Ga0501072_0096991
333 Ga0501079_0067043
334 Ga0501081_0035777
335 Ga0501045_0181270
336 nmdc:mga0yw44_77998_c1
337 nmdc:mga04h51_19866_c1
338 nmdc:mga05p37_124408_c1
339 nmdc:mga05p37_59105_c1
340 nmdc:mga0n895_134137_c1
341 nmdc:mga0n895_40038_c1
342 nmdc:mga0rr50_26369_c1
343 Ga0495655_0002428
344 Ga0495619_0007021
345 Ga0500641_0015804
346 Ga0500573_0014700
347 2623589138
348 2643835606
349 2644056532
350 2644209233
351 2644444223
352 2644610232
353 2644652735
354 2686538266
355 2738696580
356 2738698163
357 2739324310
358 2739327934
359 2739605516
360 2760306968
361 2809028750
362 2819667614
363 2858869911
364 2906802039

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

79

371

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4rya-assembly1.cif.gz_A crystal structure of abc transporter solute binding protein avi_3567 from agrobacterium vitis s4, target efi-510645, with bound d-mannitol 0.9552 15 423
4rya-assembly1.cif.gz_A crystal structure of abc transporter solute binding protein avi_3567 from agrobacterium vitis s4, target efi-510645, with bound d-mannitol 0.9351 15 423
5iai-assembly1.cif.gz_A crystal structure of abc transporter solute binding protein arad_9887 from agrobacterium radiobacter k84, target efi-510945 in complex with ribitol 0.9017 12 418
5iai-assembly1.cif.gz_A crystal structure of abc transporter solute binding protein arad_9887 from agrobacterium radiobacter k84, target efi-510945 in complex with ribitol 0.8888 12 418
7ofy-assembly2.cif.gz_B crystal structure of sq binding protein from agrobacterium tumefaciens in complex with sulfoquinovosyl glycerol (sqgro) 0.8629 14 415
ID Description Score Start End Superfamily
4ryaA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9537 15 379 3.40.190.10
4ryaA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9405 15 379 3.40.190.10
4ryaA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9142 132 423 3.40.190.10
4ryaA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8885 132 423 3.40.190.10
5ysdB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8766 12 363 3.40.190.10
ID Description Score Start End GO Terms
AF-X1E6B2-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.9708 32 319
AF-A0A0M8TR24-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.9702 13 422
AF-A0A4R8FX84-F1-model_v4 Extracellular solute-binding protein 0.9618 112 289 GO:0042597
AF-A0A535LP98-F1-model_v4 Extracellular solute-binding protein 0.9563 85 416
AF-A0A7C6TIK1-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.9509 1 360

Map