F278847

General Info

Members Datasets Scaffolds Average Seq Length
182 137 364 1006

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100010402|Ga0068863_1000104028
Length 1144
Sequence MTLGRDQHVGALQIPVHDSTIVRVRQRVCDVERVAQNFVEWQSAFGNAVGQPAARDQFHRDVHAPVAVTDVVNRADGRMVERRRELGLLQEAGTCGFAHAAGANGGQDLIGPEASTNRNCHGFAPILSHLHQETDNPPLQITPAFASATGVSARLWFCSEESIMPGLTRGRSFWLCVASLALTAGWGFGVPATRVVAQSTDAIDKAIVDALRWRSIGPLRGGRSIAITGVKGRPKEGYFGAVGGGLWKTVDGGLSWNPVTDGQIKSSSVGAVAVADSNPDVVYIGMGESCIRGNIMPGDGVYKSTDAGKTWTHVGFRNSDAISKIRIHPTNPDIVFVADFGLYGKESDERGVFKSADGGKSWKKVLFKDAKSGGIDVAIDRRNPNVMFAALWEAYRVEYQMSSGGPGSGLYKSTDGGETWKEITRTGGLPQGLYGKMSIAISGADSNRVYALIENDKVRQRAFYYTHAFADPNNKDVVYMLNTSAFRSVDGGKTLTNIGNGTHGDHHDFWIDPDDSNHVMVANDGGGAVSYDIASAQRHWTGQEFPTAQFYHVITTRHVPYHVCGAQQDNSEPGYIAPDPKDPDVFFAGANNGAFLTRLNRRTGELKEVGAYPRFFSGENSAQVKERWQWTYPIIFSPVDPKVLYTSSQRVWKTTDDGQTWTAISGDLTRHDPKTFQDSGGPITHDMNSPEIYGTVFSLAPGKTDVNILWSGSDDGIVQLTRDGGKTWTNVTPRDMPDFGRVSQIDASIFDAGSAYVSVKKPLLEDFSPYIFRTHDFGRTWTKIVTGIAANDYISSVREDPVRKGLLYAGAQHGFYVSLDDGDHWQPLSSGLPDTQVSDIWVEGQDIAIATHGRSFYVLDDVTPLRQYNASVTSTADAHLFKPGDAIRGGSPARFTYWLKRPAQNLKLEILDARGQVMRSFDGALPAAGMTAGVQRFSWDLQSTPVVSFQGMVLWGATQAGPAVLPGTYQARLTVDGRPQTQSFTVKKHPFRSATDADLQAQWDLASQIRDKVNEANNAVMQIRRIKKDLAERVEKANNADAKAIAELLQKELTAVEEDVYQVRNQSNQDPLNFPIRTNNRLASLLRVVQAGEGRPTSNVGPIFEDLKAELKVETDRLQRALTTYLPRFNEVVRRLGLQPITEK

Samples

Sample ID Description Type Environment
1 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
82 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
83 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
84 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
85 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
86 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
87 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
88 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
89 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
105 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
113 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
114 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
115 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
116 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
137 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.2
Nodule 0
Rhizoplane 1.1
Rhizosphere 94.51
Stem 0
Stem Tuber 0
Unclassified 1.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068863_100010402 3300005841 Bacteria 9042
2 Ga0065707_10084475 3300005295 Bacteria 7162
3 Ga0070676_10017281 3300005328 Bacteria 3993
4 Ga0070670_100009482 3300005331 Bacteria 8312
5 Ga0070670_100020786 3300005331 Bacteria 5644
6 Ga0070666_10002763 3300005335 Bacteria 10602
7 Ga0070689_100024931 3300005340 Bacteria 4489
8 Ga0070691_10000796 3300005341 Bacteria 12587
9 Ga0070661_100002753 3300005344 Bacteria 12055
10 Ga0070661_100010497 3300005344 Bacteria 6442
11 Ga0070668_100016374 3300005347 Bacteria 5543
12 Ga0070669_100001326 3300005353 Bacteria 17847
13 Ga0070675_100002192 3300005354 Bacteria 14468
14 Ga0070675_100008912 3300005354 Bacteria 7795
15 Ga0070674_100007384 3300005356 Bacteria 6482
16 Ga0070688_100025997 3300005365 Bacteria 3473
17 Ga0070659_100008601 3300005366 Bacteria 7464
18 Ga0070714_100003872 3300005435 Bacteria 11242
19 Ga0070714_100011297 3300005435 Bacteria 7079
20 Ga0070694_100005207 3300005444 Bacteria 7853
21 Ga0070694_100015568 3300005444 Bacteria 4779
22 Ga0070708_100000072 3300005445 Bacteria 65220
23 Ga0070681_10004217 3300005458 Bacteria 13622
24 Ga0068867_100010206 3300005459 Bacteria 6624
25 Ga0070706_100030336 3300005467 Bacteria 4982
26 Ga0070707_100059888 3300005468 Bacteria 3651
27 Ga0070698_100026443 3300005471 Bacteria 6041
28 Ga0070698_100041328 3300005471 Bacteria 4733
29 Ga0070699_100002075 3300005518 Bacteria 18133
30 Ga0070699_100022200 3300005518 Bacteria 5467
31 Ga0070684_100000236 3300005535 Bacteria 38259
32 Ga0070695_100002469 3300005545 Bacteria 10648
33 Ga0070696_100005356 3300005546 Bacteria 8559
34 Ga0070664_100032960 3300005564 Bacteria 4334
35 Ga0068857_100001365 3300005577 Bacteria 19231
36 Ga0068857_100032457 3300005577 Bacteria 4617
37 Ga0068856_100002568 3300005614 Bacteria 18704
38 Ga0068862_100029247 3300005844 Bacteria 4642
39 Ga0075364_10002935 3300006051 Bacteria 9610
40 Ga0075362_10000973 3300006177 Bacteria 8756
41 Ga0075367_10008738 3300006178 Bacteria 5263
42 Ga0075428_100010091 3300006844 Bacteria 10491
43 Ga0075428_100039035 3300006844 Bacteria 5226
44 Ga0075431_100001036 3300006847 Bacteria 24775
45 Ga0075434_100017911 3300006871 Bacteria 6833
46 Ga0075434_100023816 3300006871 Bacteria 5974
47 Ga0075434_100023906 3300006871 Bacteria 5965
48 Ga0075436_100021973 3300006914 Unclassified 4381
49 Ga0075435_100001712 3300007076 Bacteria 14251
50 Ga0075435_100008909 3300007076 Bacteria 7231
51 Ga0075435_100015831 3300007076 Bacteria 5676
52 Ga0105240_10000318 3300009093 Bacteria 91931
53 Ga0105240_10019695 3300009093 Bacteria 9012
54 Ga0111539_10007081 3300009094 Bacteria 14374
55 Ga0111539_10013258 3300009094 Bacteria 10305
56 Ga0111539_10018053 3300009094 Bacteria 8738
57 Ga0111539_10023904 3300009094 Bacteria 7508
58 Ga0114129_10008970 3300009147 Bacteria 14259
59 Ga0114129_10020963 3300009147 Bacteria 9282
60 Ga0114129_10060875 3300009147 Bacteria 5277
61 Ga0105249_10003347 3300009553 Bacteria 13876
62 Ga0157370_10009001 3300013104 Bacteria 10719
63 Ga0163162_10038474 3300013306 Bacteria 4774
64 Ga0157372_10029379 3300013307 Bacteria 6002
65 Ga0163163_10016404 3300014325 Bacteria 6883
66 Ga0157380_10002903 3300014326 Bacteria 11653
67 Ga0163161_10005323 3300017792 Bacteria 8960
68 Ga0213876_10002277 3300021384 Bacteria 11320
69 Ga0207645_10003704 3300025907 Bacteria 11519
70 Ga0207643_10012749 3300025908 Bacteria 4544
71 Ga0207684_10002038 3300025910 Bacteria 20809
72 Ga0207707_10002348 3300025912 Bacteria 17046
73 Ga0207695_10000433 3300025913 Bacteria 91913
74 Ga0207693_10009727 3300025915 Bacteria 7828
75 Ga0207657_10000873 3300025919 Bacteria 31812
76 Ga0207649_10003074 3300025920 Bacteria 9165
77 Ga0207646_10000810 3300025922 Bacteria 40719
78 Ga0207650_10001584 3300025925 Bacteria 16251
79 Ga0207650_10010637 3300025925 Bacteria 6319
80 Ga0207650_10019384 3300025925 Bacteria 4779
81 Ga0207659_10001769 3300025926 Bacteria 12777
82 Ga0207706_10039081 3300025933 Bacteria 4207
83 Ga0207686_10000368 3300025934 Bacteria 31650
84 Ga0207691_10012698 3300025940 Bacteria 8067
85 Ga0207711_10012048 3300025941 Bacteria 7188
86 Ga0207679_10001972 3300025945 Bacteria 12722
87 Ga0207679_10007978 3300025945 Bacteria 6731
88 Ga0207679_10011452 3300025945 Bacteria 5747
89 Ga0207712_10012450 3300025961 Bacteria 5435
90 Ga0207708_10016628 3300026075 Bacteria 5534
91 Ga0207708_10023072 3300026075 Bacteria 4701
92 Ga0207641_10013027 3300026088 Bacteria 6820
93 Ga0207648_10005653 3300026089 Bacteria 12553
94 Ga0207648_10014245 3300026089 Bacteria 7354
95 Ga0207676_10009097 3300026095 Bacteria 7073
96 Ga0207674_10001020 3300026116 Bacteria 36602
97 Ga0207674_10008993 3300026116 Bacteria 11476
98 Ga0207674_10011967 3300026116 Bacteria 9724
99 Ga0207674_10019295 3300026116 Bacteria 7387
100 Ga0207675_100003577 3300026118 Bacteria 15143
101 Ga0207428_10006419 3300027907 Bacteria 10861
102 Ga0268265_10005628 3300028380 Bacteria 8559
103 Ga0268265_10032496 3300028380 Bacteria 3783
104 Ga0265332_10013763 3300031238 Bacteria 3581
105 Ga0265314_10025969 3300031711 Bacteria 4409
106 Ga0307410_10025350 3300031852 Bacteria 3720
107 Ga0307410_10033834 3300031852 Bacteria 3304
108 Ga0307406_10000865 3300031901 Bacteria 17056
109 Ga0307407_10000522 3300031903 Bacteria 11947
110 Ga0307411_10024132 3300032005 Bacteria 3619
111 Ga0373934_0001389 3300035086 Bacteria 8823
112 Ga0373923_0002530 3300035111 Bacteria 5655
113 Ga0373954_0001133 3300035118 Bacteria 10689
114 Ga0373956_0008216 3300035119 Bacteria 4224
115 Ga0373943_0004375 3300035170 Bacteria 6405
116 Ga0373955_0004189 3300035172 Bacteria 6367
117 Ga0373955_0005473 3300035172 Bacteria 5709
118 Ga0373931_0005633 3300035691 Bacteria 5811
119 Ga0373935_0002062 3300035692 Bacteria 11386
120 Ga0373933_0000285 3300035724 Bacteria 32663
121 Ga0373933_0004448 3300035724 Bacteria 7693
122 Ga0373937_0000473 3300036401 Bacteria 37180
123 Ga0373937_0000820 3300036401 Bacteria 26602
124 Ga0373937_0001367 3300036401 Bacteria 20391
125 Ga0373937_0003095 3300036401 Bacteria 13915
126 Ga0373925_0001293 3300037068 Bacteria 22008
127 Ga0395899_0007862 3300037312 Bacteria 8220
128 Ga0395900_0033729 3300037418 Bacteria 5268
129 Ga0395905_0001529 3300037471 Bacteria 27674
130 Ga0436364_1050144 3300037853 Bacteria 10990
131 Ga0436365_0722595 3300039437 Bacteria 3500
132 Ga0436365_1736218 3300039437 Bacteria 34920
133 Ga0466966_0002111 3300044684 Bacteria 12914
134 Ga0453684_0022433 3300044712 Bacteria 9362
135 Ga0466959_0011488 3300045049 Bacteria 6366
136 Ga0495603_0002149 3300046455 Bacteria 11592
137 Ga0495629_0016644 3300046459 Bacteria 5277
138 Ga0495651_0000899 3300046462 Bacteria 23100
139 Ga0495653_0001049 3300046463 Bacteria 21269
140 Ga0495582_0000826 3300046473 Bacteria 17157
141 Ga0495639_0000181 3300046475 Bacteria 33194
142 Ga0495628_0017693 3300046516 Bacteria 5925
143 Ga0495630_0003846 3300046517 Bacteria 10479
144 Ga0495630_0012268 3300046517 Bacteria 6217
145 Ga0495652_0045604 3300046529 Bacteria 3767
146 Ga0495586_0014195 3300046535 Bacteria 4233
147 Ga0495645_0000381 3300046543 Bacteria 30803
148 Ga0495645_0003211 3300046543 Bacteria 11087
149 Ga0495667_0001789 3300046559 Bacteria 14252
150 Ga0495667_0003841 3300046559 Bacteria 10088
151 Ga0495657_0001243 3300046675 Bacteria 22263
152 Ga0495599_0000875 3300046678 Bacteria 16813
153 Ga0495623_0001769 3300046679 Bacteria 14507
154 Ga0495646_0001540 3300046680 Bacteria 13749
155 Ga0495658_0000055 3300046683 Bacteria 57250
156 Ga0495600_0000305 3300046809 Bacteria 26244
157 Ga0495581_0000423 3300047315 Bacteria 21431
158 Ga0495604_0000842 3300047317 Bacteria 25608
159 Ga0495674_0009156 3300047319 Bacteria 9410
160 Ga0495680_0006167 3300047322 Bacteria 11181
161 Ga0495675_0003942 3300047444 Bacteria 8995
162 Ga0495684_0005693 3300047471 Bacteria 9698
163 Ga0495593_0000064 3300047673 Bacteria 44878
164 Ga0495602_0009897 3300048088 Bacteria 9891
165 Ga0495614_0000080 3300048089 Bacteria 31722
166 Ga0496109_0010824 3300048912 Bacteria 7809
167 Ga0496111_0005712 3300048914 Bacteria 8019
168 Ga0501034_0003154 3300049571 Bacteria 18965
169 Ga0501034_0034203 3300049571 Bacteria 5153
170 nmdc:mga03683_285_c1 3300050489 Bacteria 15049
171 nmdc:mga0qj67_13320_c1 3300050509 Bacteria 6206
172 nmdc:mga0qj67_14230_c1 3300050509 Bacteria 6014
173 nmdc:mga08y16_13238_c1 3300050511 Bacteria 8675
174 nmdc:mga08y16_16300_c1 3300050511 Bacteria 7814
175 nmdc:mga08y16_23774_c1 3300050511 Bacteria 6470
176 nmdc:mga0rr50_10828_c1 3300050513 Bacteria 5815
177 nmdc:mga0rr50_11937_c1 3300050513 Bacteria 5588
178 nmdc:mga0rr50_20941_c1 3300050513 Bacteria 4455
179 Ga0495655_0001043 3300053083 Unclassified 4272
180 Ga0495619_0010211 3300053085 Bacteria 5914
181 Ga0590071_000017 3300059421 Bacteria 43985
182 Ga0590077_000013 3300059426 Bacteria 39559
183 Ga0068863_100010402
184 Ga0065707_10084475
185 Ga0070676_10017281
186 Ga0070670_100009482
187 Ga0070670_100020786
188 Ga0070666_10002763
189 Ga0070689_100024931
190 Ga0070691_10000796
191 Ga0070661_100002753
192 Ga0070661_100010497
193 Ga0070668_100016374
194 Ga0070669_100001326
195 Ga0070675_100002192
196 Ga0070675_100008912
197 Ga0070674_100007384
198 Ga0070688_100025997
199 Ga0070659_100008601
200 Ga0070714_100003872
201 Ga0070714_100011297
202 Ga0070694_100005207
203 Ga0070694_100015568
204 Ga0070708_100000072
205 Ga0070681_10004217
206 Ga0068867_100010206
207 Ga0070706_100030336
208 Ga0070707_100059888
209 Ga0070698_100026443
210 Ga0070698_100041328
211 Ga0070699_100002075
212 Ga0070699_100022200
213 Ga0070684_100000236
214 Ga0070695_100002469
215 Ga0070696_100005356
216 Ga0070664_100032960
217 Ga0068857_100001365
218 Ga0068857_100032457
219 Ga0068856_100002568
220 Ga0068862_100029247
221 Ga0075364_10002935
222 Ga0075362_10000973
223 Ga0075367_10008738
224 Ga0075428_100010091
225 Ga0075428_100039035
226 Ga0075431_100001036
227 Ga0075434_100017911
228 Ga0075434_100023816
229 Ga0075434_100023906
230 Ga0075436_100021973
231 Ga0075435_100001712
232 Ga0075435_100008909
233 Ga0075435_100015831
234 Ga0105240_10000318
235 Ga0105240_10019695
236 Ga0111539_10007081
237 Ga0111539_10013258
238 Ga0111539_10018053
239 Ga0111539_10023904
240 Ga0114129_10008970
241 Ga0114129_10020963
242 Ga0114129_10060875
243 Ga0105249_10003347
244 Ga0157370_10009001
245 Ga0163162_10038474
246 Ga0157372_10029379
247 Ga0163163_10016404
248 Ga0157380_10002903
249 Ga0163161_10005323
250 Ga0213876_10002277
251 Ga0207645_10003704
252 Ga0207643_10012749
253 Ga0207684_10002038
254 Ga0207707_10002348
255 Ga0207695_10000433
256 Ga0207693_10009727
257 Ga0207657_10000873
258 Ga0207649_10003074
259 Ga0207646_10000810
260 Ga0207650_10001584
261 Ga0207650_10010637
262 Ga0207650_10019384
263 Ga0207659_10001769
264 Ga0207706_10039081
265 Ga0207686_10000368
266 Ga0207691_10012698
267 Ga0207711_10012048
268 Ga0207679_10001972
269 Ga0207679_10007978
270 Ga0207679_10011452
271 Ga0207712_10012450
272 Ga0207708_10016628
273 Ga0207708_10023072
274 Ga0207641_10013027
275 Ga0207648_10005653
276 Ga0207648_10014245
277 Ga0207676_10009097
278 Ga0207674_10001020
279 Ga0207674_10008993
280 Ga0207674_10011967
281 Ga0207674_10019295
282 Ga0207675_100003577
283 Ga0207428_10006419
284 Ga0268265_10005628
285 Ga0268265_10032496
286 Ga0265332_10013763
287 Ga0265314_10025969
288 Ga0307410_10025350
289 Ga0307410_10033834
290 Ga0307406_10000865
291 Ga0307407_10000522
292 Ga0307411_10024132
293 Ga0373934_0001389
294 Ga0373923_0002530
295 Ga0373954_0001133
296 Ga0373956_0008216
297 Ga0373943_0004375
298 Ga0373955_0004189
299 Ga0373955_0005473
300 Ga0373931_0005633
301 Ga0373935_0002062
302 Ga0373933_0000285
303 Ga0373933_0004448
304 Ga0373937_0000473
305 Ga0373937_0000820
306 Ga0373937_0001367
307 Ga0373937_0003095
308 Ga0373925_0001293
309 Ga0395899_0007862
310 Ga0395900_0033729
311 Ga0395905_0001529
312 Ga0436364_1050144
313 Ga0436365_0722595
314 Ga0436365_1736218
315 Ga0466966_0002111
316 Ga0453684_0022433
317 Ga0466959_0011488
318 Ga0495603_0002149
319 Ga0495629_0016644
320 Ga0495651_0000899
321 Ga0495653_0001049
322 Ga0495582_0000826
323 Ga0495639_0000181
324 Ga0495628_0017693
325 Ga0495630_0003846
326 Ga0495630_0012268
327 Ga0495652_0045604
328 Ga0495586_0014195
329 Ga0495645_0000381
330 Ga0495645_0003211
331 Ga0495667_0001789
332 Ga0495667_0003841
333 Ga0495657_0001243
334 Ga0495599_0000875
335 Ga0495623_0001769
336 Ga0495646_0001540
337 Ga0495658_0000055
338 Ga0495600_0000305
339 Ga0495581_0000423
340 Ga0495604_0000842
341 Ga0495674_0009156
342 Ga0495680_0006167
343 Ga0495675_0003942
344 Ga0495684_0005693
345 Ga0495593_0000064
346 Ga0495602_0009897
347 Ga0495614_0000080
348 Ga0496109_0010824
349 Ga0496111_0005712
350 Ga0501034_0003154
351 Ga0501034_0034203
352 nmdc:mga03683_285_c1
353 nmdc:mga0qj67_13320_c1
354 nmdc:mga0qj67_14230_c1
355 nmdc:mga08y16_13238_c1
356 nmdc:mga08y16_16300_c1
357 nmdc:mga08y16_23774_c1
358 nmdc:mga0rr50_10828_c1
359 nmdc:mga0rr50_11937_c1
360 nmdc:mga0rr50_20941_c1
361 Ga0495655_0001043
362 Ga0495619_0010211
363 Ga0590071_000017
364 Ga0590077_000013

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF15902

Sortilin-Vps10

Sortilin, neurotensin receptor 3,

299

474

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ewx-assembly2.cif.gz_B n-terminal wd40 domain of beta'-copi subunit with two chains in the asymmetric unit 0.8063 377 707
8f0e-assembly2.cif.gz_B n-terminal wd40 domain of beta'-copi subunit with four chains in the asymmetric unit 0.7972 377 707
4cy5-assembly1.cif.gz_A crystal structure of the nsl1-wds-nsl2 complex. 0.7854 374 707
8ewx-assembly2.cif.gz_B n-terminal wd40 domain of beta'-copi subunit with two chains in the asymmetric unit 0.7836 377 707
8f0e-assembly2.cif.gz_B n-terminal wd40 domain of beta'-copi subunit with four chains in the asymmetric unit 0.7677 377 707
ID Description Score Start End Superfamily
af_M0R6L2_498_673_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8082 543 712 2.130.10.10
af_A0A0R0FM96_16_129_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8024 555 658 2.130.10.10
af_Q9USL1_7_173_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.795 543 664 2.40.128.630
af_Q84Z07_12_155_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.7912 543 673 2.40.128.630
af_A2RRU3_36_317_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7891 376 705 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A2V7MI61-F1-model_v4 Glycosyl hydrolase 0.9894 633 714
AF-A0A2V7JEV2-F1-model_v4 Glycosyl hydrolase 0.9858 116 258 GO:0016787
AF-A0A2V8GKS8-F1-model_v4 Glycosyl hydrolase 0.9793 60 211 GO:0010411
GO:0016787
AF-A0A359LX28-F1-model_v4 Glycosyl hydrolase 0.9755 100 227 GO:0010411
GO:0016787
AF-A0A2V9FVU0-F1-model_v4 Sortilin N-terminal domain-containing protein 0.9728 90 232 GO:0000272
GO:0016798

Map