F278294

General Info

Members Datasets Scaffolds Average Seq Length
181 132 362 462

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2984576629|2984578389
Length 530
Sequence PPRPDAASSDHPTDAEPTAETDPTDASPADQHAPRHDDRHDLDLDHELPERRWHYRRSLASRVTLLTTIAVGVAVAFLSLSVYFVVRIQLEDTMDEQLLDRATSMAAGLTSAAADKDRDQLLTQLRFLPRDSRVQILFADGSILLTNGTTTLPLGDEEWDVATSDADHAVLRSVTVAGDHVRMATVPMDLSNGRIGALVMTQNTDSQQKFLGKLGLVMLGFGGTGVILAAVAGTVVARNGLRPVRRLTESVETIARTEELTPLRVEGDDEIARLATAFNQMLTALSASRERQKQLVADAGHELKTPLTSLRTNLDLLAQAEDTGAALSPETRRELIDDVRAQIVELSTLIGDLVELARDEQVRHVVEPVSLVEVLDKAVARVRLRAPTVTFEVRAAPWWLVGESHSLERAITNLLDNAAKWSPTDGRVVATLANGILTVDDQGPGIPEDDREYVFERFFRSTESRAMPGSGLGLAIVRQVAERHAGSVRAGVSPSGGARLTMTLPGGPLHPDATRPIPRESRGATTAPTG

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
50 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
51 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
62 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
63 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
64 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
65 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
66 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
67 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
68 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
69 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
70 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
71 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
72 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
81 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
94 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
95 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
96 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
102 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
110 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
111 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
112 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
113 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
114 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
115 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
116 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
117 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
118 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
119 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
120 2558860280 Kutzneria sp. 744 Isolate Unclassified
121 2643221615 Nocardioides sp. Root224 Isolate Unclassified
122 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
123 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
124 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
125 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
126 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
127 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
128 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
129 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
130 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
131 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
132 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.61
Metatranscriptomes 1.1
Isolates 8.29

Biome Distribution

Category Percentage (%)
Aerial Root 1.66
Bulb 0
Endosphere 2.76
Nodule 0
Rhizoplane 4.97
Rhizosphere 83.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10017017 3300001979 Bacteria 2611
2 JGI24735J21928_10014092 3300002067 Bacteria 2506
3 JGI25407J50210_10006925 3300003373 Bacteria 2834
4 Ga0070683_100005603 3300005329 Bacteria 10491
5 Ga0070666_10022583 3300005335 Bacteria 4087
6 Ga0070680_100071535 3300005336 Bacteria 2850
7 Ga0070682_100006348 3300005337 Bacteria 6636
8 Ga0070682_100159574 3300005337 Bacteria 1556
9 Ga0070681_10191282 3300005458 Bacteria 1966
10 Ga0070698_100001281 3300005471 Bacteria 28053
11 Ga0070679_100017725 3300005530 Bacteria 6893
12 Ga0068853_100012793 3300005539 Bacteria 6835
13 Ga0070665_100003149 3300005548 Bacteria 17743
14 Ga0070665_100184188 3300005548 Bacteria 2089
15 Ga0068855_100128091 3300005563 Bacteria 2901
16 Ga0070702_100020093 3300005615 Bacteria 3494
17 Ga0068861_100100330 3300005719 Bacteria 2301
18 Ga0068858_100204469 3300005842 Bacteria 1868
19 Ga0068860_100039921 3300005843 Bacteria 4488
20 Ga0081538_10015864 3300005981 Bacteria 5809
21 Ga0075365_10005649 3300006038 Bacteria 6773
22 Ga0075365_10078058 3300006038 Bacteria 2238
23 Ga0075430_100007153 3300006846 Bacteria 9418
24 Ga0075431_100008331 3300006847 Bacteria 10369
25 Ga0075434_100091430 3300006871 Bacteria 3045
26 Ga0111539_10007041 3300009094 Bacteria 14433
27 Ga0105245_10000417 3300009098 Bacteria 39694
28 Ga0105245_10056929 3300009098 Bacteria 3515
29 Ga0114129_10020098 3300009147 Bacteria 9505
30 Ga0105248_10045205 3300009177 Bacteria 4938
31 Ga0105249_10219088 3300009553 Bacteria 1872
32 Ga0105239_10012396 3300010375 Bacteria 9492
33 Ga0105246_10000698 3300011119 Bacteria 18936
34 Ga0157369_10073704 3300013105 Bacteria 3663
35 Ga0163162_10002324 3300013306 Bacteria 17835
36 Ga0157372_10001027 3300013307 Bacteria 30507
37 Ga0157375_10118987 3300013308 Bacteria 2749
38 Ga0163163_10034154 3300014325 Bacteria 4924
39 Ga0157379_10007269 3300014968 Bacteria 9584
40 Ga0206353_11118078 3300020082 Bacteria 2645
41 Ga0206353_11663309 3300020082 Bacteria 3044
42 Ga0213875_10003125 3300021388 Bacteria 9533
43 Ga0207680_10011865 3300025903 Bacteria 4420
44 Ga0207707_10156671 3300025912 Bacteria 1992
45 Ga0207652_10039793 3300025921 Bacteria 3991
46 Ga0207661_10104308 3300025944 Bacteria 2387
47 Ga0207661_10136787 3300025944 Bacteria 2105
48 Ga0207667_10111267 3300025949 Bacteria 2825
49 Ga0207639_10023422 3300026041 Bacteria 4459
50 Ga0207708_10043588 3300026075 Bacteria 3419
51 Ga0207676_10073422 3300026095 Bacteria 2753
52 Ga0207675_100102785 3300026118 Bacteria 2693
53 Ga0207675_100160569 3300026118 Bacteria 2144
54 Ga0207428_10008707 3300027907 Bacteria 9156
55 Ga0268266_10002883 3300028379 Bacteria 17858
56 Ga0307511_10003584 3300030521 Bacteria 15903
57 Ga0316176_1043415 3300030732 Bacteria 7931
58 Ga0316180_1061755 3300030736 Bacteria 5454
59 Ga0307412_10028467 3300031911 Bacteria 3496
60 Ga0307409_100092028 3300031995 Bacteria 2487
61 Ga0307416_100062126 3300032002 Bacteria 3053
62 Ga0307416_100157750 3300032002 Bacteria 2092
63 Ga0307415_100007648 3300032126 Bacteria 5928
64 Ga0395899_0005056 3300037312 Bacteria 10260
65 Ga0395900_0014634 3300037418 Bacteria 8002
66 Ga0395900_0028887 3300037418 Bacteria 5685
67 Ga0395898_0029363 3300037466 Bacteria 5508
68 Ga0436364_0118889 3300037853 Bacteria 2101
69 Ga0436364_0242123 3300037853 Bacteria 61107
70 Ga0395901_0019110 3300038443 Bacteria 7007
71 Ga0395901_0077197 3300038443 Bacteria 3476
72 Ga0451833_0579776 3300041491 Bacteria 14024
73 Ga0451837_0610587 3300041494 Bacteria 3824
74 Ga0451853_2177475 3300041512 Bacteria 2139
75 Ga0439434_0003531 3300042435 Bacteria 4567
76 Ga0466969_0008065 3300044656 Bacteria 5593
77 Ga0466969_0010202 3300044656 Bacteria 4980
78 Ga0466972_0042669 3300044658 Bacteria 2204
79 Ga0466965_0006541 3300044683 Bacteria 5303
80 Ga0466965_0041405 3300044683 Bacteria 2270
81 Ga0466966_0006399 3300044684 Bacteria 7788
82 Ga0466961_0007117 3300044693 Bacteria 7116
83 Ga0466961_0120345 3300044693 Bacteria 1648
84 Ga0466963_0001706 3300044694 Bacteria 11964
85 Ga0466963_0037058 3300044694 Bacteria 3183
86 Ga0466963_0075481 3300044694 Bacteria 2275
87 Ga0466971_0012289 3300044719 Bacteria 3751
88 Ga0466970_0011532 3300044765 Bacteria 4506
89 Ga0466960_0017820 3300044901 Bacteria 3104
90 Ga0466967_0019448 3300045976 Bacteria 5460
91 Ga0466967_0043597 3300045976 Bacteria 3885
92 Ga0466967_0076385 3300045976 Bacteria 3013
93 Ga0466967_0083662 3300045976 Bacteria 2886
94 Ga0466967_0098512 3300045976 Bacteria 2669
95 Ga0466967_0129130 3300045976 Bacteria 2344
96 Ga0466967_0176428 3300045976 Bacteria 2013
97 Ga0496102_0015850 3300048905 Bacteria 6572
98 Ga0496107_0022979 3300048910 Bacteria 4409
99 Ga0496108_0044838 3300048911 Bacteria 3692
100 Ga0496109_0006465 3300048912 Bacteria 9868
101 Ga0496109_0037209 3300048912 Bacteria 4397
102 Ga0496110_0013181 3300048913 Bacteria 6826
103 Ga0496110_0089586 3300048913 Bacteria 2750
104 Ga0496110_0247326 3300048913 Bacteria 1623
105 Ga0496111_0002489 3300048914 Bacteria 11107
106 Ga0501031_0018417 3300049568 Bacteria 4544
107 Ga0501032_0004253 3300049569 Bacteria 10813
108 Ga0501034_0020571 3300049571 Bacteria 6740
109 Ga0501034_0033873 3300049571 Bacteria 5179
110 Ga0501036_0015326 3300049572 Bacteria 6402
111 Ga0501036_0047680 3300049572 Bacteria 3627
112 Ga0501037_0002323 3300049573 Bacteria 13743
113 Ga0501037_0032811 3300049573 Bacteria 3836
114 Ga0501037_0113314 3300049573 Bacteria 1953
115 Ga0501038_0019872 3300049574 Bacteria 6045
116 Ga0501039_0003893 3300049575 Bacteria 11206
117 Ga0501042_0011333 3300049578 Bacteria 6013
118 Ga0501043_0063934 3300049579 Bacteria 2889
119 Ga0501046_0003534 3300049580 Bacteria 14310
120 Ga0501047_0046328 3300049581 Bacteria 4202
121 Ga0501047_0054640 3300049581 Bacteria 3863
122 Ga0501047_0092152 3300049581 Bacteria 2909
123 Ga0501048_0005545 3300049582 Bacteria 9597
124 Ga0501067_0009238 3300049583 Bacteria 5459
125 Ga0501068_0008375 3300049584 Bacteria 5752
126 Ga0501069_0012552 3300049585 Bacteria 4506
127 Ga0501069_0018909 3300049585 Bacteria 3720
128 Ga0501070_0003621 3300049586 Bacteria 13337
129 Ga0501070_0034509 3300049586 Bacteria 4229
130 Ga0501070_0034923 3300049586 Bacteria 4202
131 Ga0501070_0038563 3300049586 Bacteria 3986
132 Ga0501071_0016058 3300049587 Bacteria 5145
133 Ga0501071_0148728 3300049587 Bacteria 1746
134 Ga0501072_0033786 3300049588 Bacteria 4008
135 Ga0501072_0103723 3300049588 Bacteria 2260
136 Ga0501073_0012391 3300049589 Bacteria 6222
137 Ga0501073_0047537 3300049589 Bacteria 3016
138 Ga0501073_0092767 3300049589 Bacteria 2098
139 Ga0501074_0003002 3300049590 Bacteria 11870
140 Ga0501074_0005193 3300049590 Bacteria 9358
141 Ga0501075_0204117 3300049591 Bacteria 1508
142 Ga0501079_0039940 3300049741 Bacteria 3620
143 Ga0501080_0058207 3300049742 Bacteria 3597
144 Ga0501080_0121650 3300049742 Bacteria 2418
145 Ga0501080_0123661 3300049742 Bacteria 2397
146 Ga0501083_0019462 3300049744 Bacteria 4729
147 Ga0501083_0023804 3300049744 Bacteria 4246
148 Ga0501035_0027610 3300049822 Bacteria 5186
149 Ga0501035_0035003 3300049822 Bacteria 4562
150 Ga0501044_0009792 3300049823 Bacteria 10421
151 Ga0501044_0074562 3300049823 Bacteria 3446
152 Ga0501044_0106288 3300049823 Bacteria 2819
153 Ga0501045_0108620 3300049824 Bacteria 2056
154 nmdc:mga05p37_1004_c1 3300050507 Bacteria 32165
155 nmdc:mga0qj67_20192_c1 3300050509 Bacteria 5099
156 nmdc:mga06r32_167_c1 3300050510 Bacteria 51343
157 nmdc:mga06r32_3557_c1 3300050510 Bacteria 13919
158 nmdc:mga08y16_34973_c1 3300050511 Bacteria 5279
159 Ga0500641_0054594 3300053096 Bacteria 1652
160 Ga0500556_0000317 3300053104 Bacteria 36403
161 Ga0500573_0106208 3300053140 Bacteria 1576
162 Ga0501084_0099460 3300054114 Bacteria 2442
163 Ga0501082_0089183 3300060353 Bacteria 2662
164 Ga0501082_0098059 3300060353 Bacteria 2534
165 Ga0530510_0054722 3300061734 Bacteria 2884
166 Ga0530510_0099246 3300061734 Bacteria 2129
167 2984578389 2984576629 Bacteria 4248407
168 2515852053 2515154155 Bacteria 7985436
169 2559427248 2558860280 Bacteria 11429938
170 2644092722 2643221615 Bacteria 5487866
171 2644322335 2643221657 Bacteria 5490246
172 2644539499 2643221697 Bacteria 3575694
173 2645721311 2643221961 Bacteria 3919167
174 2753074421 2751185734 Bacteria 8863695
175 2863069192 2863067949 Bacteria 8541735
176 2866552893 2866552031 Bacteria 5824618
177 2870728872 2870721527 Bacteria 9689237
178 2883822024 2883821847 Bacteria 5121194
179 2984593198 2984592036 Bacteria 3670284
180 2990259198 2990256926 Bacteria 4252839
181 8056212675 8056207758 Bacteria 8639239
182 JGI24740J21852_10017017
183 JGI24735J21928_10014092
184 JGI25407J50210_10006925
185 Ga0070683_100005603
186 Ga0070666_10022583
187 Ga0070680_100071535
188 Ga0070682_100006348
189 Ga0070682_100159574
190 Ga0070681_10191282
191 Ga0070698_100001281
192 Ga0070679_100017725
193 Ga0068853_100012793
194 Ga0070665_100003149
195 Ga0070665_100184188
196 Ga0068855_100128091
197 Ga0070702_100020093
198 Ga0068861_100100330
199 Ga0068858_100204469
200 Ga0068860_100039921
201 Ga0081538_10015864
202 Ga0075365_10005649
203 Ga0075365_10078058
204 Ga0075430_100007153
205 Ga0075431_100008331
206 Ga0075434_100091430
207 Ga0111539_10007041
208 Ga0105245_10000417
209 Ga0105245_10056929
210 Ga0114129_10020098
211 Ga0105248_10045205
212 Ga0105249_10219088
213 Ga0105239_10012396
214 Ga0105246_10000698
215 Ga0157369_10073704
216 Ga0163162_10002324
217 Ga0157372_10001027
218 Ga0157375_10118987
219 Ga0163163_10034154
220 Ga0157379_10007269
221 Ga0206353_11118078
222 Ga0206353_11663309
223 Ga0213875_10003125
224 Ga0207680_10011865
225 Ga0207707_10156671
226 Ga0207652_10039793
227 Ga0207661_10104308
228 Ga0207661_10136787
229 Ga0207667_10111267
230 Ga0207639_10023422
231 Ga0207708_10043588
232 Ga0207676_10073422
233 Ga0207675_100102785
234 Ga0207675_100160569
235 Ga0207428_10008707
236 Ga0268266_10002883
237 Ga0307511_10003584
238 Ga0316176_1043415
239 Ga0316180_1061755
240 Ga0307412_10028467
241 Ga0307409_100092028
242 Ga0307416_100062126
243 Ga0307416_100157750
244 Ga0307415_100007648
245 Ga0395899_0005056
246 Ga0395900_0014634
247 Ga0395900_0028887
248 Ga0395898_0029363
249 Ga0436364_0118889
250 Ga0436364_0242123
251 Ga0395901_0019110
252 Ga0395901_0077197
253 Ga0451833_0579776
254 Ga0451837_0610587
255 Ga0451853_2177475
256 Ga0439434_0003531
257 Ga0466969_0008065
258 Ga0466969_0010202
259 Ga0466972_0042669
260 Ga0466965_0006541
261 Ga0466965_0041405
262 Ga0466966_0006399
263 Ga0466961_0007117
264 Ga0466961_0120345
265 Ga0466963_0001706
266 Ga0466963_0037058
267 Ga0466963_0075481
268 Ga0466971_0012289
269 Ga0466970_0011532
270 Ga0466960_0017820
271 Ga0466967_0019448
272 Ga0466967_0043597
273 Ga0466967_0076385
274 Ga0466967_0083662
275 Ga0466967_0098512
276 Ga0466967_0129130
277 Ga0466967_0176428
278 Ga0496102_0015850
279 Ga0496107_0022979
280 Ga0496108_0044838
281 Ga0496109_0006465
282 Ga0496109_0037209
283 Ga0496110_0013181
284 Ga0496110_0089586
285 Ga0496110_0247326
286 Ga0496111_0002489
287 Ga0501031_0018417
288 Ga0501032_0004253
289 Ga0501034_0020571
290 Ga0501034_0033873
291 Ga0501036_0015326
292 Ga0501036_0047680
293 Ga0501037_0002323
294 Ga0501037_0032811
295 Ga0501037_0113314
296 Ga0501038_0019872
297 Ga0501039_0003893
298 Ga0501042_0011333
299 Ga0501043_0063934
300 Ga0501046_0003534
301 Ga0501047_0046328
302 Ga0501047_0054640
303 Ga0501047_0092152
304 Ga0501048_0005545
305 Ga0501067_0009238
306 Ga0501068_0008375
307 Ga0501069_0012552
308 Ga0501069_0018909
309 Ga0501070_0003621
310 Ga0501070_0034509
311 Ga0501070_0034923
312 Ga0501070_0038563
313 Ga0501071_0016058
314 Ga0501071_0148728
315 Ga0501072_0033786
316 Ga0501072_0103723
317 Ga0501073_0012391
318 Ga0501073_0047537
319 Ga0501073_0092767
320 Ga0501074_0003002
321 Ga0501074_0005193
322 Ga0501075_0204117
323 Ga0501079_0039940
324 Ga0501080_0058207
325 Ga0501080_0121650
326 Ga0501080_0123661
327 Ga0501083_0019462
328 Ga0501083_0023804
329 Ga0501035_0027610
330 Ga0501035_0035003
331 Ga0501044_0009792
332 Ga0501044_0074562
333 Ga0501044_0106288
334 Ga0501045_0108620
335 nmdc:mga05p37_1004_c1
336 nmdc:mga0qj67_20192_c1
337 nmdc:mga06r32_167_c1
338 nmdc:mga06r32_3557_c1
339 nmdc:mga08y16_34973_c1
340 Ga0500641_0054594
341 Ga0500556_0000317
342 Ga0500573_0106208
343 Ga0501084_0099460
344 Ga0501082_0089183
345 Ga0501082_0098059
346 Ga0530510_0054722
347 Ga0530510_0099246
348 2984578389
349 2515852053
350 2559427248
351 2644092722
352 2644322335
353 2644539499
354 2645721311
355 2753074421
356 2863069192
357 2866552893
358 2870728872
359 2883822024
360 2984593198
361 2990259198
362 8056212675

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00672

HAMP

HAMP domain

235

287

0.96

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

402

508

0.95

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

291

362

0.91

Map