F277785

General Info

Members Datasets Scaffolds Average Seq Length
181 125 362 120

Family's Representative Sequence

Representative Sequence 3300041453|Ga0451797_1438676|Ga0451797_1438676_569_958
Length 129
Sequence MALHRCAHNAAMNALQIIDFATPLDADPSEPAADRLISGAPKQTLANYFSDATQQFFAGRWSSSPGKWRIRYTESEFCCLMKGRVVLESAQGRWEFGPGAAFVVPAGFEGTWEVLESCTKFYAIFEART

Samples

Sample ID Description Type Environment
1 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
56 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
84 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
94 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
95 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
96 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
97 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
98 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
99 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
100 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
101 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
102 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
103 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
104 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
109 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
110 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
111 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
112 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
113 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
114 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
115 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
122 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
124 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
125 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.9
Metatranscriptomes 0
Isolates 1.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.97
Nodule 0
Rhizoplane 8.84
Rhizosphere 80.11
Stem 0
Stem Tuber 0
Unclassified 49.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451797_1438676 3300041453 Unclassified 1437
2 JGI25151J46595_10000688 3300003187 Bacteria 28508
3 JGI25153J46596_10059042 3300003215 Bacteria 1052
4 rootL2_10015699 3300003322 Unclassified 2194
5 rootL2_10059158 3300003322 Bacteria 3328
6 JGI25160J50197_1026228 3300003354 Bacteria 1611
7 Ga0070676_10049169 3300005328 Bacteria 2467
8 Ga0070670_100097559 3300005331 Unclassified 2528
9 Ga0070670_100181783 3300005331 Unclassified 1826
10 Ga0070677_10031060 3300005333 Bacteria 2038
11 Ga0070677_10242421 3300005333 Bacteria 890
12 Ga0070666_10543630 3300005335 Bacteria 845
13 Ga0070682_100012880 3300005337 Bacteria 4800
14 Ga0070682_100022241 3300005337 Bacteria 3753
15 Ga0070682_100034422 3300005337 Bacteria 3085
16 Ga0070682_101363780 3300005337 Unclassified 605
17 Ga0070689_101105098 3300005340 Unclassified 709
18 Ga0070669_100184629 3300005353 Bacteria 1633
19 Ga0070675_100013813 3300005354 Bacteria 6357
20 Ga0070675_100062102 3300005354 Unclassified 3086
21 Ga0070671_100135364 3300005355 Bacteria 2077
22 Ga0070671_100324854 3300005355 Unclassified 1311
23 Ga0070674_100051863 3300005356 Unclassified 2828
24 Ga0070674_100373203 3300005356 Unclassified 1158
25 Ga0070673_100061460 3300005364 Bacteria 2980
26 Ga0070688_100062704 3300005365 Bacteria 2354
27 Ga0070688_100731403 3300005365 Unclassified 769
28 Ga0070659_100487082 3300005366 Bacteria 1050
29 Ga0070714_100196155 3300005435 Bacteria 1845
30 Ga0070663_100546700 3300005455 Bacteria 967
31 Ga0070678_100103036 3300005456 Bacteria 2216
32 Ga0070678_100327249 3300005456 Unclassified 1310
33 Ga0068867_100153026 3300005459 Unclassified 1813
34 Ga0070685_10146157 3300005466 Bacteria 1494
35 Ga0070685_10511506 3300005466 Unclassified 851
36 Ga0068853_100026002 3300005539 Bacteria 4913
37 Ga0070672_100321514 3300005543 Bacteria 1315
38 Ga0070686_100747559 3300005544 Bacteria 784
39 Ga0070665_100137945 3300005548 Bacteria 2442
40 Ga0070665_100836569 3300005548 Bacteria 933
41 Ga0068866_10020845 3300005718 Bacteria 3010
42 Ga0068861_100150467 3300005719 Bacteria 1909
43 Ga0068861_101460979 3300005719 Unclassified 670
44 Ga0068870_10012688 3300005840 Unclassified 3944
45 Ga0068870_10265834 3300005840 Unclassified 1069
46 Ga0068863_100070563 3300005841 Bacteria 3304
47 Ga0068863_101029791 3300005841 Unclassified 826
48 Ga0068858_100793448 3300005842 Unclassified 924
49 Ga0081455_10041719 3300005937 Unclassified 4032
50 Ga0070716_100069855 3300006173 Bacteria 2060
51 Ga0097621_100222430 3300006237 Bacteria 1645
52 Ga0097621_100983528 3300006237 Unclassified 789
53 Ga0097621_101066732 3300006237 Unclassified 757
54 Ga0068871_100053091 3300006358 Bacteria 3284
55 Ga0068871_100576206 3300006358 Unclassified 1021
56 Ga0068865_100049716 3300006881 Bacteria 2892
57 Ga0111539_11601349 3300009094 Unclassified 755
58 Ga0105243_10193411 3300009148 Bacteria 1778
59 Ga0105243_10473291 3300009148 Unclassified 1181
60 Ga0105242_10067573 3300009176 Unclassified 2956
61 Ga0105248_11482205 3300009177 Bacteria 768
62 Ga0105249_10512536 3300009553 Unclassified 1246
63 Ga0105033_100172 3300009986 Bacteria 4971
64 Ga0157378_10147484 3300013297 Bacteria 2190
65 Ga0157378_10486873 3300013297 Unclassified 1230
66 Ga0163162_10155453 3300013306 Unclassified 2407
67 Ga0157375_10605680 3300013308 Unclassified 1254
68 Ga0163163_10167000 3300014325 Bacteria 2247
69 Ga0157380_10007825 3300014326 Bacteria 7606
70 Ga0157380_10137885 3300014326 Unclassified 2091
71 Ga0157380_10581131 3300014326 Bacteria 1105
72 Ga0157379_10070456 3300014968 Unclassified 3128
73 Ga0157376_10150127 3300014969 Unclassified 2101
74 Ga0157376_10814038 3300014969 Unclassified 947
75 Ga0163161_10122629 3300017792 Unclassified 1954
76 Ga0163161_10504321 3300017792 Unclassified 986
77 Ga0163161_10585850 3300017792 Unclassified 918
78 Ga0209130_1000467 3300025284 Bacteria 41801
79 Ga0209025_1000891 3300025294 Bacteria 46550
80 Ga0209758_1008749 3300025297 Bacteria 6464
81 Ga0207426_1000065 3300025302 Bacteria 353625
82 Ga0207682_10008225 3300025893 Bacteria 4135
83 Ga0207682_10235999 3300025893 Bacteria 849
84 Ga0207642_10015969 3300025899 Unclassified 2815
85 Ga0207680_10296813 3300025903 Bacteria 1126
86 Ga0207645_10023493 3300025907 Bacteria 4006
87 Ga0207643_10101125 3300025908 Bacteria 1691
88 Ga0207643_10275513 3300025908 Unclassified 1042
89 Ga0207662_10361349 3300025918 Unclassified 977
90 Ga0207681_10361481 3300025923 Bacteria 1164
91 Ga0207681_11263343 3300025923 Unclassified 620
92 Ga0207644_10248652 3300025931 Bacteria 1418
93 Ga0207644_10474491 3300025931 Unclassified 1030
94 Ga0207686_10047183 3300025934 Bacteria 2662
95 Ga0207670_10059040 3300025936 Unclassified 2608
96 Ga0207669_10033129 3300025937 Bacteria 2911
97 Ga0207669_10724201 3300025937 Bacteria 819
98 Ga0207704_10141687 3300025938 Unclassified 1683
99 Ga0207704_10183838 3300025938 Bacteria 1513
100 Ga0207665_10177955 3300025939 Bacteria 1539
101 Ga0207691_10022481 3300025940 Bacteria 5947
102 Ga0207691_10335176 3300025940 Bacteria 1295
103 Ga0207711_11774185 3300025941 Unclassified 560
104 Ga0207689_10043860 3300025942 Bacteria 3697
105 Ga0207689_10584145 3300025942 Bacteria 939
106 Ga0207651_10047201 3300025960 Bacteria 2902
107 Ga0207677_10102283 3300026023 Bacteria 2112
108 Ga0207639_10065886 3300026041 Bacteria 2813
109 Ga0207678_10072190 3300026067 Unclassified 2958
110 Ga0207678_10381382 3300026067 Unclassified 1219
111 Ga0207641_10034667 3300026088 Bacteria 4200
112 Ga0207641_10898376 3300026088 Unclassified 879
113 Ga0207675_100309567 3300026118 Bacteria 1540
114 Ga0207683_10065354 3300026121 Unclassified 3207
115 Ga0207683_10389067 3300026121 Unclassified 1282
116 Ga0268266_10181385 3300028379 Bacteria 1917
117 Ga0268266_10728103 3300028379 Bacteria 957
118 Ga0268266_11796746 3300028379 Unclassified 588
119 Ga0268265_10774700 3300028380 Unclassified 933
120 Ga0265330_10155303 3300031235 Bacteria 972
121 Ga0307513_10092892 3300031456 Unclassified 3069
122 Ga0307513_10212305 3300031456 Unclassified 1765
123 Ga0307509_10042255 3300031507 Bacteria 4942
124 Ga0307405_11418552 3300031731 Unclassified 608
125 Ga0307413_10104120 3300031824 Unclassified 1883
126 Ga0307413_11086603 3300031824 Unclassified 690
127 Ga0307410_10034896 3300031852 Bacteria 3262
128 Ga0307409_100613989 3300031995 Unclassified 1076
129 Ga0307416_100453127 3300032002 Unclassified 1336
130 Ga0307416_102763524 3300032002 Unclassified 587
131 Ga0307411_10144364 3300032005 Unclassified 1759
132 Ga0307415_100192511 3300032126 Bacteria 1611
133 Ga0307415_100958015 3300032126 Unclassified 793
134 Ga0307415_101094145 3300032126 Unclassified 746
135 Ga0307415_102262939 3300032126 Unclassified 533
136 Ga0373946_0172396 3300035171 Unclassified 1022
137 Ga0436363_0641697 3300039450 Bacteria 6231
138 Ga0451787_505569 3300041441 Bacteria 912
139 Ga0451787_573725 3300041441 Unclassified 704
140 Ga0451789_0091273 3300041443 Bacteria 997
141 Ga0451791_1535185 3300041451 Unclassified 1036
142 Ga0451791_1751116 3300041451 Unclassified 2062
143 Ga0451793_0066091 3300041452 Unclassified 1184
144 Ga0451797_0845925 3300041453 Unclassified 687
145 Ga0451800_0149258 3300041459 Bacteria 670
146 Ga0451800_1243093 3300041459 Unclassified 625
147 Ga0451802_0738957 3300041460 Unclassified 1391
148 Ga0451802_1516030 3300041460 Unclassified 682
149 Ga0451802_1804316 3300041460 Unclassified 645
150 Ga0451807_1685062 3300041486 Unclassified 1794
151 Ga0451807_1856299 3300041486 Bacteria 746
152 Ga0451807_2370631 3300041486 Bacteria 1001
153 Ga0451839_0284027 3300041496 Unclassified 600
154 Ga0451843_0820449 3300041509 Unclassified 1047
155 Ga0451853_2343275 3300041512 Unclassified 523
156 Ga0439431_0054216 3300041997 Bacteria 1045
157 Ga0466966_0207410 3300044684 Bacteria 1185
158 Ga0466959_0092198 3300045049 Bacteria 2175
159 Ga0495590_0043685 3300046457 Bacteria 1563
160 Ga0495638_0070731 3300046460 Bacteria 2136
161 Ga0495610_0065845 3300046512 Bacteria 1708
162 Ga0495620_0122814 3300046515 Bacteria 1022
163 Ga0495632_0043750 3300046519 Unclassified 2237
164 Ga0495656_0129689 3300046615 Unclassified 1199
165 Ga0495625_0026196 3300046660 Bacteria 4409
166 Ga0495625_0064139 3300046660 Unclassified 2592
167 Ga0495625_0085886 3300046660 Bacteria 2183
168 Ga0495649_0028245 3300046694 Unclassified 3109
169 Ga0495649_0540780 3300046694 Bacteria 577
170 Ga0495660_0390079 3300046810 Unclassified 612
171 Ga0495681_0308455 3300047470 Unclassified 611
172 Ga0495686_0090053 3300047472 Bacteria 1864
173 Ga0495682_0087770 3300049460 Unclassified 1118
174 Ga0501038_1013719 3300049574 Unclassified 609
175 Ga0501069_0821744 3300049585 Bacteria 564
176 nmdc:mga08y16_1012437_c1 3300050511 Unclassified 810
177 Ga0500568_0051648 3300053139 Bacteria 1617
178 Ga0500611_014815 3300053727 Unclassified 1369
179 Ga0501084_0565195 3300054114 Unclassified 961
180 2821447640 2821443989 Bacteria 7658172
181 2844539542 2844533157 Bacteria 7517899
182 Ga0451797_1438676
183 JGI25151J46595_10000688
184 JGI25153J46596_10059042
185 rootL2_10015699
186 rootL2_10059158
187 JGI25160J50197_1026228
188 Ga0070676_10049169
189 Ga0070670_100097559
190 Ga0070670_100181783
191 Ga0070677_10031060
192 Ga0070677_10242421
193 Ga0070666_10543630
194 Ga0070682_100012880
195 Ga0070682_100022241
196 Ga0070682_100034422
197 Ga0070682_101363780
198 Ga0070689_101105098
199 Ga0070669_100184629
200 Ga0070675_100013813
201 Ga0070675_100062102
202 Ga0070671_100135364
203 Ga0070671_100324854
204 Ga0070674_100051863
205 Ga0070674_100373203
206 Ga0070673_100061460
207 Ga0070688_100062704
208 Ga0070688_100731403
209 Ga0070659_100487082
210 Ga0070714_100196155
211 Ga0070663_100546700
212 Ga0070678_100103036
213 Ga0070678_100327249
214 Ga0068867_100153026
215 Ga0070685_10146157
216 Ga0070685_10511506
217 Ga0068853_100026002
218 Ga0070672_100321514
219 Ga0070686_100747559
220 Ga0070665_100137945
221 Ga0070665_100836569
222 Ga0068866_10020845
223 Ga0068861_100150467
224 Ga0068861_101460979
225 Ga0068870_10012688
226 Ga0068870_10265834
227 Ga0068863_100070563
228 Ga0068863_101029791
229 Ga0068858_100793448
230 Ga0081455_10041719
231 Ga0070716_100069855
232 Ga0097621_100222430
233 Ga0097621_100983528
234 Ga0097621_101066732
235 Ga0068871_100053091
236 Ga0068871_100576206
237 Ga0068865_100049716
238 Ga0111539_11601349
239 Ga0105243_10193411
240 Ga0105243_10473291
241 Ga0105242_10067573
242 Ga0105248_11482205
243 Ga0105249_10512536
244 Ga0105033_100172
245 Ga0157378_10147484
246 Ga0157378_10486873
247 Ga0163162_10155453
248 Ga0157375_10605680
249 Ga0163163_10167000
250 Ga0157380_10007825
251 Ga0157380_10137885
252 Ga0157380_10581131
253 Ga0157379_10070456
254 Ga0157376_10150127
255 Ga0157376_10814038
256 Ga0163161_10122629
257 Ga0163161_10504321
258 Ga0163161_10585850
259 Ga0209130_1000467
260 Ga0209025_1000891
261 Ga0209758_1008749
262 Ga0207426_1000065
263 Ga0207682_10008225
264 Ga0207682_10235999
265 Ga0207642_10015969
266 Ga0207680_10296813
267 Ga0207645_10023493
268 Ga0207643_10101125
269 Ga0207643_10275513
270 Ga0207662_10361349
271 Ga0207681_10361481
272 Ga0207681_11263343
273 Ga0207644_10248652
274 Ga0207644_10474491
275 Ga0207686_10047183
276 Ga0207670_10059040
277 Ga0207669_10033129
278 Ga0207669_10724201
279 Ga0207704_10141687
280 Ga0207704_10183838
281 Ga0207665_10177955
282 Ga0207691_10022481
283 Ga0207691_10335176
284 Ga0207711_11774185
285 Ga0207689_10043860
286 Ga0207689_10584145
287 Ga0207651_10047201
288 Ga0207677_10102283
289 Ga0207639_10065886
290 Ga0207678_10072190
291 Ga0207678_10381382
292 Ga0207641_10034667
293 Ga0207641_10898376
294 Ga0207675_100309567
295 Ga0207683_10065354
296 Ga0207683_10389067
297 Ga0268266_10181385
298 Ga0268266_10728103
299 Ga0268266_11796746
300 Ga0268265_10774700
301 Ga0265330_10155303
302 Ga0307513_10092892
303 Ga0307513_10212305
304 Ga0307509_10042255
305 Ga0307405_11418552
306 Ga0307413_10104120
307 Ga0307413_11086603
308 Ga0307410_10034896
309 Ga0307409_100613989
310 Ga0307416_100453127
311 Ga0307416_102763524
312 Ga0307411_10144364
313 Ga0307415_100192511
314 Ga0307415_100958015
315 Ga0307415_101094145
316 Ga0307415_102262939
317 Ga0373946_0172396
318 Ga0436363_0641697
319 Ga0451787_505569
320 Ga0451787_573725
321 Ga0451789_0091273
322 Ga0451791_1535185
323 Ga0451791_1751116
324 Ga0451793_0066091
325 Ga0451797_0845925
326 Ga0451800_0149258
327 Ga0451800_1243093
328 Ga0451802_0738957
329 Ga0451802_1516030
330 Ga0451802_1804316
331 Ga0451807_1685062
332 Ga0451807_1856299
333 Ga0451807_2370631
334 Ga0451839_0284027
335 Ga0451843_0820449
336 Ga0451853_2343275
337 Ga0439431_0054216
338 Ga0466966_0207410
339 Ga0466959_0092198
340 Ga0495590_0043685
341 Ga0495638_0070731
342 Ga0495610_0065845
343 Ga0495620_0122814
344 Ga0495632_0043750
345 Ga0495656_0129689
346 Ga0495625_0026196
347 Ga0495625_0064139
348 Ga0495625_0085886
349 Ga0495649_0028245
350 Ga0495649_0540780
351 Ga0495660_0390079
352 Ga0495681_0308455
353 Ga0495686_0090053
354 Ga0495682_0087770
355 Ga0501038_1013719
356 Ga0501069_0821744
357 nmdc:mga08y16_1012437_c1
358 Ga0500568_0051648
359 Ga0500611_014815
360 Ga0501084_0565195
361 2821447640
362 2844539542

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05899

Cupin_3

EutQ-like cupin domain

50

122

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o5u-assembly2.cif.gz_B crystal structure of a duf861 family protein (tm1112) from thermotoga maritima at 1.83 a resolution 0.9738 52 115
3bcw-assembly1.cif.gz_A crystal structure of a duf861 family protein with a rmlc-like cupin fold (bb1179) from bordetella bronchiseptica rb50 at 1.60 a resolution 0.8754 3 120
4axo-assembly1.cif.gz_B structure of the clostridium difficile eutq protein 0.874 33 121
3bcw-assembly1.cif.gz_A crystal structure of a duf861 family protein with a rmlc-like cupin fold (bb1179) from bordetella bronchiseptica rb50 at 1.60 a resolution 0.8685 3 120
3myx-assembly2.cif.gz_B crystal structure of a pspto_0244 (protein with unknown function which belongs to pfam duf861 family) from pseudomonas syringae pv. tomato str. dc3000 at 1.30 a resolution 0.8668 9 117
ID Description Score Start End Superfamily
1o5uB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9738 52 115 2.60.120.10
af_Q6K9G4_18_110_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9602 52 115 2.60.120.10
af_O48852_32_133_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.944 52 115 2.60.120.10
3bcwB01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9307 17 120 2.60.120.10
3bcwB01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9221 17 120 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A0A0CXJ0-F1-model_v4 Transcriptional regulator 1.001 1 122
AF-A0A3D9Y139-F1-model_v4 deleted 0.9992 50 117
AF-A0A433GHC4-F1-model_v4 deleted 0.997 21 122
AF-A0A6A7Y4M0-F1-model_v4 DUF861 domain-containing protein 0.9968 35 121
AF-A0A534BKE7-F1-model_v4 DUF861 domain-containing protein 0.9936 29 122

Map