F277066

General Info

Members Datasets Scaffolds Average Seq Length
181 109 362 325

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100000417|Ga0068860_10000041720
Length 375
Sequence MGRIDPDAQDFGPCALAPAARTLGVSLEPSEGSQRDHDAPTTPGDAPGAPVSARRVPPRTLRRMVELATRAPSVHNTQPWRWRGTPRSLELYADRSRQLVAGDPDGRNLVISCGAALHHARVAADALGWSAAVSVLPDPDQPELLARVELAPSPPSHHAPELLDAIGHRCTDRRRFTSWPVPEERLTHLAALATEQGSRALPLTDLSERFHAELLINRAIDVQHADRPVMAEQQAWIDHGSADGVPRAVLPIPDDLRARRPSRFATGLLEDIGGREIEGSDGLVVLCAPNDDVASWLAAGQALSAIWLGATIEGLSVVPLSQVIEVPETRNAFQTEVLGGLAHPLVVIRVGWQPISRSQLPPTPRRPVAEVLELT

Samples

Sample ID Description Type Environment
1 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
61 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
64 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
73 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
79 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
80 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
81 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
82 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
83 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
84 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
85 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
86 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
87 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
88 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
89 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
90 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
91 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
92 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
93 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
94 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
95 2558860280 Kutzneria sp. 744 Isolate Unclassified
96 2643221561 Nocardioides sp. Root151 Isolate Unclassified
97 2643221576 Nocardioides sp. Root614 Isolate Unclassified
98 2643221590 Nocardioides sp. Root682 Isolate Unclassified
99 2643221604 Nocardioides sp. Root190 Isolate Unclassified
100 2643221617 Nocardioides sp. Root79 Isolate Unclassified
101 2643221620 Nocardioides sp. Root240 Isolate Unclassified
102 2643221641 Nocardioides sp. Root122 Isolate Unclassified
103 2643221696 Nocardioides sp. Root140 Isolate Unclassified
104 2738541305 Nocardioides sp. CF167 Isolate Unclassified
105 2739367898 Nocardioides sp. CF479 Isolate Unclassified
106 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
107 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
108 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
109 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.61
Metatranscriptomes 1.1
Isolates 8.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.73
Nodule 0
Rhizoplane 4.97
Rhizosphere 56.35
Stem 0
Stem Tuber 0
Unclassified 6.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068860_100000417 3300005843 Bacteria 55103
2 Ga0006562J51391_1006541 3300003578 Bacteria 6516
3 Ga0070683_100063302 3300005329 Bacteria 3440
4 Ga0070683_100272217 3300005329 Bacteria 1611
5 Ga0070682_100019140 3300005337 Bacteria 4012
6 Ga0070682_100098273 3300005337 Bacteria 1928
7 Ga0070660_100075630 3300005339 Bacteria 2637
8 Ga0070660_100104688 3300005339 Bacteria 2245
9 Ga0070689_100087001 3300005340 Bacteria 2458
10 Ga0070691_10058227 3300005341 Unclassified 1855
11 Ga0070692_10001089 3300005345 Bacteria 9444
12 Ga0070692_10005537 3300005345 Bacteria 5398
13 Ga0070675_100131799 3300005354 Bacteria 2131
14 Ga0070674_100072973 3300005356 Bacteria 2432
15 Ga0070659_100026032 3300005366 Bacteria 4500
16 Ga0070667_100200574 3300005367 Bacteria 1770
17 Ga0070701_10007008 3300005438 Bacteria 4780
18 Ga0070700_100003867 3300005441 Bacteria 7771
19 Ga0068867_100008339 3300005459 Bacteria 7314
20 Ga0068867_100017742 3300005459 Bacteria 5052
21 Ga0070685_10022259 3300005466 Bacteria 3453
22 Ga0068853_100007993 3300005539 Bacteria 8483
23 Ga0068853_100043035 3300005539 Bacteria 3863
24 Ga0070686_100066515 3300005544 Bacteria 2345
25 Ga0070664_100078597 3300005564 Bacteria 2838
26 Ga0070664_100094705 3300005564 Bacteria 2590
27 Ga0068861_100168357 3300005719 Bacteria 1814
28 Ga0068870_10002066 3300005840 Bacteria 8308
29 Ga0075365_10004986 3300006038 Bacteria 7109
30 Ga0075365_10011134 3300006038 Bacteria 5277
31 Ga0075365_10012194 3300006038 Bacteria 5093
32 Ga0075365_10014395 3300006038 Bacteria 4757
33 Ga0075365_10018307 3300006038 Bacteria 4306
34 Ga0075365_10042672 3300006038 Bacteria 2966
35 Ga0075365_10047092 3300006038 Bacteria 2833
36 Ga0075365_10054223 3300006038 Bacteria 2658
37 Ga0075365_10067361 3300006038 Bacteria 2403
38 Ga0075365_10079080 3300006038 Bacteria 2225
39 Ga0075365_10253392 3300006038 Bacteria 1237
40 Ga0075368_10001618 3300006042 Bacteria 7226
41 Ga0075368_10005420 3300006042 Bacteria 4384
42 Ga0075363_100004394 3300006048 Bacteria 6158
43 Ga0075363_100053552 3300006048 Bacteria 2157
44 Ga0075364_10008014 3300006051 Bacteria 6297
45 Ga0075364_10029520 3300006051 Bacteria 3517
46 Ga0075364_10033682 3300006051 Bacteria 3300
47 Ga0075364_10052164 3300006051 Bacteria 2672
48 Ga0075364_10058398 3300006051 Bacteria 2528
49 Ga0075364_10058705 3300006051 Bacteria 2521
50 Ga0075362_10013988 3300006177 Bacteria 3228
51 Ga0075367_10014319 3300006178 Bacteria 4292
52 Ga0075367_10017789 3300006178 Bacteria 3908
53 Ga0075367_10057052 3300006178 Bacteria 2322
54 Ga0075370_10037371 3300006353 Bacteria 2730
55 Ga0075370_10110321 3300006353 Bacteria 1597
56 Ga0075428_100319082 3300006844 Bacteria 1670
57 Ga0111539_10010372 3300009094 Bacteria 11730
58 Ga0105245_10016609 3300009098 Bacteria 6424
59 Ga0105245_10311523 3300009098 Bacteria 1548
60 Ga0105243_10003758 3300009148 Bacteria 12169
61 Ga0105243_10012065 3300009148 Bacteria 6533
62 Ga0105248_10075793 3300009177 Bacteria 3780
63 Ga0105248_10189599 3300009177 Bacteria 2317
64 Ga0105238_10021144 3300009551 Bacteria 6632
65 Ga0105249_10025761 3300009553 Bacteria 5297
66 Ga0157372_10033022 3300013307 Bacteria 5681
67 Ga0157372_10226975 3300013307 Bacteria 2165
68 Ga0163163_10023666 3300014325 Bacteria 5832
69 Ga0163163_10415802 3300014325 Bacteria 1403
70 Ga0157380_10003527 3300014326 Bacteria 10754
71 Ga0157380_10006010 3300014326 Bacteria 8501
72 Ga0157380_10138415 3300014326 Bacteria 2088
73 Ga0157380_10174706 3300014326 Bacteria 1881
74 Ga0157380_10493281 3300014326 Bacteria 1188
75 Ga0157377_10011574 3300014745 Bacteria 4410
76 Ga0157377_10034066 3300014745 Bacteria 2784
77 Ga0163161_10022636 3300017792 Bacteria 4427
78 Ga0206354_11507901 3300020081 Bacteria 1779
79 Ga0207688_10003513 3300025901 Bacteria 8555
80 Ga0207647_10064196 3300025904 Bacteria 2232
81 Ga0207643_10002070 3300025908 Bacteria 11056
82 Ga0207662_10049739 3300025918 Bacteria 2487
83 Ga0207657_10058256 3300025919 Bacteria 3324
84 Ga0207657_10081912 3300025919 Bacteria 2709
85 Ga0207659_10093632 3300025926 Bacteria 2249
86 Ga0207706_10054198 3300025933 Bacteria 3539
87 Ga0207709_10009120 3300025935 Bacteria 5468
88 Ga0207704_10021965 3300025938 Bacteria 3410
89 Ga0207691_10014861 3300025940 Bacteria 7419
90 Ga0207691_10030300 3300025940 Bacteria 5057
91 Ga0207711_10061233 3300025941 Bacteria 3245
92 Ga0207679_10057939 3300025945 Bacteria 2868
93 Ga0207712_10135403 3300025961 Bacteria 1883
94 Ga0207712_10251459 3300025961 Bacteria 1429
95 Ga0207658_10050370 3300025986 Bacteria 3064
96 Ga0207708_10001356 3300026075 Bacteria 18391
97 Ga0207708_10010065 3300026075 Bacteria 7020
98 Ga0207648_10001531 3300026089 Bacteria 25458
99 Ga0207648_10103694 3300026089 Bacteria 2494
100 Ga0207675_100002597 3300026118 Bacteria 17876
101 Ga0207675_100015375 3300026118 Bacteria 7137
102 Ga0207698_10348085 3300026142 Bacteria 1398
103 Ga0209813_10007091 3300027866 Bacteria 2784
104 Ga0209813_10007345 3300027866 Bacteria 2745
105 Ga0207428_10159763 3300027907 Unclassified 1712
106 Ga0268264_10000251 3300028381 Bacteria 100745
107 Ga0307511_10019156 3300030521 Bacteria 6517
108 Ga0307511_10055814 3300030521 Bacteria 3095
109 Ga0307413_10002663 3300031824 Bacteria 7314
110 Ga0307410_10220825 3300031852 Unclassified 1458
111 Ga0307410_10385889 3300031852 Bacteria 1128
112 Ga0307507_10159152 3300033179 Bacteria 1673
113 Ga0395900_0087498 3300037418 Bacteria 3202
114 Ga0395898_0080905 3300037466 Bacteria 3133
115 Ga0395898_0420895 3300037466 Bacteria 1273
116 Ga0395901_0102440 3300038443 Bacteria 3005
117 Ga0395901_0449680 3300038443 Bacteria 1318
118 Ga0395901_0533271 3300038443 Bacteria 1191
119 Ga0496106_0320230 3300048909 Bacteria 1245
120 Ga0496108_0067961 3300048911 Bacteria 3006
121 Ga0496108_0119666 3300048911 Bacteria 2258
122 Ga0496108_0180076 3300048911 Bacteria 1830
123 Ga0496114_0046131 3300048917 Bacteria 3621
124 Ga0496114_0074767 3300048917 Bacteria 2853
125 Ga0496114_0084349 3300048917 Bacteria 2690
126 Ga0496114_0085309 3300048917 Bacteria 2675
127 Ga0496114_0266900 3300048917 Bacteria 1508
128 Ga0501031_0105200 3300049568 Bacteria 1842
129 Ga0501034_0089014 3300049571 Bacteria 3085
130 Ga0501039_0160942 3300049575 Unclassified 1764
131 Ga0501040_0283257 3300049576 Bacteria 1184
132 Ga0501048_0132213 3300049582 Unclassified 1764
133 Ga0501069_0205217 3300049585 Bacteria 1143
134 Ga0501071_0204935 3300049587 Unclassified 1482
135 Ga0501072_0045868 3300049588 Bacteria 3438
136 Ga0501079_0052729 3300049741 Bacteria 3139
137 Ga0501079_0369900 3300049741 Bacteria 1124
138 Ga0501080_0317061 3300049742 Bacteria 1412
139 Ga0501045_0106432 3300049824 Unclassified 2078
140 nmdc:mga03n38_19128_c1 3300050490 Bacteria 2715
141 nmdc:mga03n38_43140_c1 3300050490 Bacteria 1975
142 nmdc:mga00v17_111686_c1 3300050491 Bacteria 1734
143 nmdc:mga00v17_20811_c1 3300050491 Bacteria 3763
144 nmdc:mga00v17_2611_c1 3300050491 Bacteria 9242
145 nmdc:mga0yw44_122351_c1 3300050492 Bacteria 1677
146 nmdc:mga0yw44_168770_c1 3300050492 Bacteria 1436
147 nmdc:mga0yw44_217094_c1 3300050492 Bacteria 1266
148 nmdc:mga0yw44_27827_c1 3300050492 Bacteria 3244
149 nmdc:mga0yw44_28181_c1 3300050492 Bacteria 3228
150 nmdc:mga0yw44_28722_c1 3300050492 Bacteria 3203
151 nmdc:mga0yw44_39885_c1 3300050492 Bacteria 2786
152 nmdc:mga0yw44_51876_c1 3300050492 Bacteria 2485
153 nmdc:mga0yw44_66365_c1 3300050492 Unclassified 2226
154 nmdc:mga0yw44_96018_c1 3300050492 Bacteria 1881
155 nmdc:mga0yw44_98368_c1 3300050492 Bacteria 1860
156 nmdc:mga06z11_31214_c1 3300050494 Bacteria 2586
157 nmdc:mga04h51_26228_c1 3300050495 Bacteria 1800
158 nmdc:mga04h51_8534_c1 3300050495 Bacteria 2744
159 nmdc:mga07m45_17624_c1 3300050496 Bacteria 3840
160 nmdc:mga07m45_29687_c1 3300050496 Bacteria 3026
161 nmdc:mga07m45_34281_c1 3300050496 Bacteria 2821
162 nmdc:mga08y16_329230_c1 3300050511 Unclassified 1572
163 Ga0495601_0072832 3300053077 Bacteria 2195
164 Ga0500644_0000156 3300053088 Bacteria 42766
165 Ga0501082_0207146 3300060353 Unclassified 1706
166 Ga0530510_0146980 3300061734 Unclassified 1739
167 2559422949 2558860280 Bacteria 11429938
168 2643826119 2643221561 Bacteria 4984412
169 2643891366 2643221576 Bacteria 5214352
170 2643960414 2643221590 Bacteria 5214697
171 2644031809 2643221604 Bacteria 5014917
172 2644101873 2643221617 Bacteria 5139111
173 2644115935 2643221620 Bacteria 5134593
174 2644230000 2643221641 Bacteria 4490190
175 2644532103 2643221696 Bacteria 5431823
176 2738870241 2738541305 Bacteria 4910150
177 2740169308 2739367898 Bacteria 4367674
178 2753072382 2751185734 Bacteria 8863695
179 2812333046 2811994874 Bacteria 5367947
180 2855387182 2855386786 Bacteria 4752232
181 8047719163 8047710418 Bacteria 11023148
182 Ga0068860_100000417
183 Ga0006562J51391_1006541
184 Ga0070683_100063302
185 Ga0070683_100272217
186 Ga0070682_100019140
187 Ga0070682_100098273
188 Ga0070660_100075630
189 Ga0070660_100104688
190 Ga0070689_100087001
191 Ga0070691_10058227
192 Ga0070692_10001089
193 Ga0070692_10005537
194 Ga0070675_100131799
195 Ga0070674_100072973
196 Ga0070659_100026032
197 Ga0070667_100200574
198 Ga0070701_10007008
199 Ga0070700_100003867
200 Ga0068867_100008339
201 Ga0068867_100017742
202 Ga0070685_10022259
203 Ga0068853_100007993
204 Ga0068853_100043035
205 Ga0070686_100066515
206 Ga0070664_100078597
207 Ga0070664_100094705
208 Ga0068861_100168357
209 Ga0068870_10002066
210 Ga0075365_10004986
211 Ga0075365_10011134
212 Ga0075365_10012194
213 Ga0075365_10014395
214 Ga0075365_10018307
215 Ga0075365_10042672
216 Ga0075365_10047092
217 Ga0075365_10054223
218 Ga0075365_10067361
219 Ga0075365_10079080
220 Ga0075365_10253392
221 Ga0075368_10001618
222 Ga0075368_10005420
223 Ga0075363_100004394
224 Ga0075363_100053552
225 Ga0075364_10008014
226 Ga0075364_10029520
227 Ga0075364_10033682
228 Ga0075364_10052164
229 Ga0075364_10058398
230 Ga0075364_10058705
231 Ga0075362_10013988
232 Ga0075367_10014319
233 Ga0075367_10017789
234 Ga0075367_10057052
235 Ga0075370_10037371
236 Ga0075370_10110321
237 Ga0075428_100319082
238 Ga0111539_10010372
239 Ga0105245_10016609
240 Ga0105245_10311523
241 Ga0105243_10003758
242 Ga0105243_10012065
243 Ga0105248_10075793
244 Ga0105248_10189599
245 Ga0105238_10021144
246 Ga0105249_10025761
247 Ga0157372_10033022
248 Ga0157372_10226975
249 Ga0163163_10023666
250 Ga0163163_10415802
251 Ga0157380_10003527
252 Ga0157380_10006010
253 Ga0157380_10138415
254 Ga0157380_10174706
255 Ga0157380_10493281
256 Ga0157377_10011574
257 Ga0157377_10034066
258 Ga0163161_10022636
259 Ga0206354_11507901
260 Ga0207688_10003513
261 Ga0207647_10064196
262 Ga0207643_10002070
263 Ga0207662_10049739
264 Ga0207657_10058256
265 Ga0207657_10081912
266 Ga0207659_10093632
267 Ga0207706_10054198
268 Ga0207709_10009120
269 Ga0207704_10021965
270 Ga0207691_10014861
271 Ga0207691_10030300
272 Ga0207711_10061233
273 Ga0207679_10057939
274 Ga0207712_10135403
275 Ga0207712_10251459
276 Ga0207658_10050370
277 Ga0207708_10001356
278 Ga0207708_10010065
279 Ga0207648_10001531
280 Ga0207648_10103694
281 Ga0207675_100002597
282 Ga0207675_100015375
283 Ga0207698_10348085
284 Ga0209813_10007091
285 Ga0209813_10007345
286 Ga0207428_10159763
287 Ga0268264_10000251
288 Ga0307511_10019156
289 Ga0307511_10055814
290 Ga0307413_10002663
291 Ga0307410_10220825
292 Ga0307410_10385889
293 Ga0307507_10159152
294 Ga0395900_0087498
295 Ga0395898_0080905
296 Ga0395898_0420895
297 Ga0395901_0102440
298 Ga0395901_0449680
299 Ga0395901_0533271
300 Ga0496106_0320230
301 Ga0496108_0067961
302 Ga0496108_0119666
303 Ga0496108_0180076
304 Ga0496114_0046131
305 Ga0496114_0074767
306 Ga0496114_0084349
307 Ga0496114_0085309
308 Ga0496114_0266900
309 Ga0501031_0105200
310 Ga0501034_0089014
311 Ga0501039_0160942
312 Ga0501040_0283257
313 Ga0501048_0132213
314 Ga0501069_0205217
315 Ga0501071_0204935
316 Ga0501072_0045868
317 Ga0501079_0052729
318 Ga0501079_0369900
319 Ga0501080_0317061
320 Ga0501045_0106432
321 nmdc:mga03n38_19128_c1
322 nmdc:mga03n38_43140_c1
323 nmdc:mga00v17_111686_c1
324 nmdc:mga00v17_20811_c1
325 nmdc:mga00v17_2611_c1
326 nmdc:mga0yw44_122351_c1
327 nmdc:mga0yw44_168770_c1
328 nmdc:mga0yw44_217094_c1
329 nmdc:mga0yw44_27827_c1
330 nmdc:mga0yw44_28181_c1
331 nmdc:mga0yw44_28722_c1
332 nmdc:mga0yw44_39885_c1
333 nmdc:mga0yw44_51876_c1
334 nmdc:mga0yw44_66365_c1
335 nmdc:mga0yw44_96018_c1
336 nmdc:mga0yw44_98368_c1
337 nmdc:mga06z11_31214_c1
338 nmdc:mga04h51_26228_c1
339 nmdc:mga04h51_8534_c1
340 nmdc:mga07m45_17624_c1
341 nmdc:mga07m45_29687_c1
342 nmdc:mga07m45_34281_c1
343 nmdc:mga08y16_329230_c1
344 Ga0495601_0072832
345 Ga0500644_0000156
346 Ga0501082_0207146
347 Ga0530510_0146980
348 2559422949
349 2643826119
350 2643891366
351 2643960414
352 2644031809
353 2644101873
354 2644115935
355 2644230000
356 2644532103
357 2738870241
358 2740169308
359 2753072382
360 2812333046
361 2855387182
362 8047719163

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ymv-assembly1.cif.gz_A structure of reduced m smegmatis 5246, a homologue of m.tuberculosis acg 0.8654 10 330
2ymv-assembly1.cif.gz_A structure of reduced m smegmatis 5246, a homologue of m.tuberculosis acg 0.8478 10 330
3gag-assembly2.cif.gz_D crystal structure of a nitroreductase-like protein (smu.346) from streptococcus mutans at 1.70 a resolution 0.7675 10 113
3ge6-assembly1.cif.gz_B crystal structure of a putative nitroreductase in complex with fmn (exig_2970) from exiguobacterium sibiricum 255-15 at 1.85 a resolution 0.7327 9 115
3ek3-assembly1.cif.gz_A-2 crystal structure of nitroreductase with bound fmn (yp_211706.1) from bacteroides fragilis nctc 9343 at 1.70 a resolution 0.7204 119 319
ID Description Score Start End Superfamily
af_P9WL07_1_99_3.40.109.10 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.9693 17 109 3.40.109.10
af_P9WL07_1_99_3.40.109.10 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.9029 17 109 3.40.109.10
af_P9WL07_100_323_3.40.109.10 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.8119 120 325 3.40.109.10
2ymvA02 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.7713 120 324 3.40.109.10
af_P9WIZ7_118_336_3.40.109.10 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.7703 115 325 3.40.109.10
ID Description Score Start End GO Terms
AF-A0A1V3WZ54-F1-model_v4 Nitroreductase family protein 0.9588 11 110 GO:0016491
AF-A0A5C4IY71-F1-model_v4 Nitroreductase family protein 0.931 15 153 GO:0016491
AF-A0A848Q9M1-F1-model_v4 deleted 0.9306 12 108
AF-A0A4S5AR86-F1-model_v4 NAD(P)H nitroreductase 0.9268 10 327 GO:0016491
AF-U7UI38-F1-model_v4 deleted 0.9245 20 111

Map