F276997

General Info

Members Datasets Scaffolds Average Seq Length
181 105 362 333

Family's Representative Sequence

Representative Sequence 3300005535|Ga0070684_100209394|Ga0070684_1002093942
Length 381
Sequence MARLPRPRGPITDELFATLRRPPEVLPRLPAPDPDVSPEADEDLQLALYCCYELHYRGFEGVDERWEWAPGLLACRSMLEVLFESALEELVPPEPFERDAADMDLVLREVADADDGPSLARYVEAHATEEQLLEFLVHRSAYQLKEADPHSWAIPRLSGPPKAALVEIQADEYGGGNPARIHARLFADSMHALGLDAEYGAYLDHLPAATLATVNLMSLLGLHRRLRGAIVGHLALFEMTSSAPNRRYGRGLRRLGFDSPEATRFFDEHVEADAVHENVAAVDLAGGLARREPELAGQIVWGARVLAALDRRWADHVLSAWEDDRSSLRYPLPEGRERSSAPLGALKPDSLCVPSQNGRSLDFPQRQSATVDRSTEISRPS

Samples

Sample ID Description Type Environment
1 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
5 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
6 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
7 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
11 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
12 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
13 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
15 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
16 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
17 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
18 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
19 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
20 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
21 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
22 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
23 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
37 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
38 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
39 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
40 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
41 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
42 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
43 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
44 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
45 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
46 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
47 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
48 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
49 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
50 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
51 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
52 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
53 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
54 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
55 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
58 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
59 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
60 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
61 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
67 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
68 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
69 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
70 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
71 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
75 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
76 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
77 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
78 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
79 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
80 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
81 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
82 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
83 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
90 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
93 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
94 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
95 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
98 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
104 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
105 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.34
Metatranscriptomes 1.1
Isolates 0.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.1
Nodule 0
Rhizoplane 17.13
Rhizosphere 69.06
Stem 0
Stem Tuber 0
Unclassified 2.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070684_100209394 3300005535 Bacteria 1777
2 Ga0070682_100360475 3300005337 Bacteria 1087
3 Ga0070714_100392781 3300005435 Bacteria 1310
4 Ga0068854_100051877 3300005578 Bacteria 2940
5 Ga0068864_100066243 3300005618 Bacteria 3135
6 Ga0068870_10139516 3300005840 Bacteria 1417
7 Ga0068860_100203553 3300005843 Bacteria 1919
8 Ga0081455_10195206 3300005937 Bacteria 1520
9 Ga0075365_10051767 3300006038 Bacteria 2713
10 Ga0075428_100008726 3300006844 Bacteria 11242
11 Ga0068865_100106307 3300006881 Bacteria 2063
12 Ga0105245_10068317 3300009098 Bacteria 3220
13 Ga0114129_10126172 3300009147 Bacteria 3518
14 Ga0105243_10129327 3300009148 Bacteria 2140
15 Ga0105243_10237336 3300009148 Bacteria 1621
16 Ga0157369_10179188 3300013105 Bacteria 2230
17 Ga0157372_10628069 3300013307 Bacteria 1251
18 Ga0163163_10159779 3300014325 Bacteria 2299
19 Ga0163163_10204073 3300014325 Bacteria 2025
20 Ga0163163_10337674 3300014325 Bacteria 1562
21 Ga0163163_10345789 3300014325 Bacteria 1543
22 Ga0157379_10007262 3300014968 Bacteria 9587
23 Ga0157379_10393890 3300014968 Unclassified 1272
24 Ga0206354_11617699 3300020081 Bacteria 2663
25 Ga0206353_11258446 3300020082 Bacteria 7367
26 Ga0213876_10008701 3300021384 Bacteria 5489
27 Ga0213876_10053916 3300021384 Bacteria 2124
28 Ga0213876_10054924 3300021384 Bacteria 2102
29 Ga0213875_10018529 3300021388 Bacteria 3354
30 Ga0207688_10071507 3300025901 Bacteria 1969
31 Ga0207688_10086871 3300025901 Bacteria 1792
32 Ga0207705_10235527 3300025909 Bacteria 1393
33 Ga0207687_10084964 3300025927 Bacteria 2295
34 Ga0207664_10053194 3300025929 Bacteria 3204
35 Ga0207661_10144442 3300025944 Bacteria 2051
36 Ga0207661_10326176 3300025944 Bacteria 1381
37 Ga0207679_10200842 3300025945 Bacteria 1665
38 Ga0207668_10069778 3300025972 Bacteria 2504
39 Ga0207640_10039816 3300025981 Bacteria 2978
40 Ga0207703_10279054 3300026035 Bacteria 1517
41 Ga0207678_10304406 3300026067 Bacteria 1370
42 Ga0207708_10046868 3300026075 Bacteria 3292
43 Ga0207674_10125746 3300026116 Bacteria 2530
44 Ga0207675_100187089 3300026118 Bacteria 1985
45 Ga0307408_100195606 3300031548 Bacteria 1633
46 Ga0307405_10029082 3300031731 Bacteria 3226
47 Ga0307405_10294313 3300031731 Bacteria 1228
48 Ga0307406_10161302 3300031901 Bacteria 1612
49 Ga0307407_10059639 3300031903 Bacteria 2223
50 Ga0307412_10068075 3300031911 Bacteria 2420
51 Ga0307409_100057082 3300031995 Bacteria 3023
52 Ga0307409_100137867 3300031995 Bacteria 2097
53 Ga0307416_100020582 3300032002 Bacteria 4712
54 Ga0307416_100028888 3300032002 Bacteria 4133
55 Ga0307414_10306835 3300032004 Bacteria 1345
56 Ga0307411_10059416 3300032005 Bacteria 2535
57 Ga0307415_100019711 3300032126 Bacteria 4100
58 Ga0307415_100031568 3300032126 Bacteria 3414
59 Ga0307415_100102230 3300032126 Bacteria 2105
60 Ga0307415_100137319 3300032126 Bacteria 1862
61 Ga0307415_100149090 3300032126 Bacteria 1798
62 Ga0395900_0043595 3300037418 Bacteria 4624
63 Ga0395898_0149673 3300037466 Bacteria 2234
64 Ga0436364_0030466 3300037853 Bacteria 3799
65 Ga0436364_0192877 3300037853 Bacteria 3821
66 Ga0436364_0224662 3300037853 Bacteria 4028
67 Ga0436364_0461490 3300037853 Bacteria 13877
68 Ga0436364_0653854 3300037853 Bacteria 9374
69 Ga0436364_0757072 3300037853 Bacteria 9325
70 Ga0436364_0938553 3300037853 Bacteria 2519
71 Ga0436364_1097207 3300037853 Bacteria 3157
72 Ga0436365_0139065 3300039437 Bacteria 6181
73 Ga0436365_0200437 3300039437 Bacteria 9623
74 Ga0436365_0851715 3300039437 Unclassified 1694
75 Ga0436365_0911509 3300039437 Bacteria 21390
76 Ga0436365_0954298 3300039437 Bacteria 3266
77 Ga0436365_1249647 3300039437 Bacteria 10861
78 Ga0436363_0062885 3300039450 Bacteria 7989
79 Ga0436363_0379825 3300039450 Bacteria 3578
80 Ga0436363_0542572 3300039450 Bacteria 5131
81 Ga0436363_1073061 3300039450 Bacteria 3370
82 Ga0439465_0006965 3300041413 Bacteria 3591
83 Ga0439455_0031370 3300042012 Bacteria 1323
84 Ga0439459_0001310 3300042438 Bacteria 3633
85 Ga0466972_0022761 3300044658 Bacteria 3119
86 Ga0466966_0028339 3300044684 Bacteria 3649
87 Ga0466963_0035802 3300044694 Bacteria 3234
88 Ga0466963_0079334 3300044694 Bacteria 2221
89 Ga0466963_0110720 3300044694 Bacteria 1885
90 Ga0466963_0180496 3300044694 Bacteria 1474
91 Ga0466964_0101375 3300044706 Bacteria 1270
92 Ga0466971_0054588 3300044719 Bacteria 1800
93 Ga0466968_0032666 3300044735 Bacteria 2166
94 Ga0466970_0021999 3300044765 Bacteria 3328
95 Ga0466970_0028834 3300044765 Bacteria 2919
96 Ga0466970_0035071 3300044765 Bacteria 2658
97 Ga0466970_0073243 3300044765 Bacteria 1843
98 Ga0466970_0100064 3300044765 Bacteria 1578
99 Ga0466957_0031140 3300044842 Bacteria 3187
100 Ga0466957_0073796 3300044842 Bacteria 2115
101 Ga0466957_0103043 3300044842 Bacteria 1801
102 Ga0466960_0000005 3300044901 Bacteria 72219
103 Ga0466960_0082522 3300044901 Bacteria 1623
104 Ga0466960_0112176 3300044901 Bacteria 1418
105 Ga0466959_0004501 3300045049 Bacteria 9341
106 Ga0466959_0004650 3300045049 Bacteria 9236
107 Ga0466959_0142572 3300045049 Bacteria 1692
108 Ga0466958_0010756 3300045836 Bacteria 5133
109 Ga0466958_0024798 3300045836 Bacteria 3530
110 Ga0466958_0044591 3300045836 Bacteria 2673
111 Ga0466958_0094936 3300045836 Bacteria 1848
112 Ga0466958_0111604 3300045836 Bacteria 1707
113 Ga0466958_0141636 3300045836 Bacteria 1514
114 Ga0466967_0000767 3300045976 Bacteria 16624
115 Ga0466967_0047775 3300045976 Bacteria 3733
116 Ga0466967_0084177 3300045976 Bacteria 2878
117 Ga0466967_0089659 3300045976 Bacteria 2792
118 Ga0466967_0175267 3300045976 Bacteria 2020
119 Ga0466967_0544290 3300045976 Bacteria 1142
120 Ga0495650_0000121 3300046471 Bacteria 183055
121 Ga0495663_0056970 3300046525 Bacteria 1222
122 Ga0495615_0009325 3300048090 Bacteria 1927
123 Ga0496100_0036516 3300048903 Bacteria 3100
124 Ga0496101_0045249 3300048904 Bacteria 3152
125 Ga0496101_0085529 3300048904 Bacteria 2337
126 Ga0496102_0012925 3300048905 Bacteria 7229
127 Ga0496102_0012942 3300048905 Bacteria 7225
128 Ga0496104_0005158 3300048907 Bacteria 11413
129 Ga0496104_0005714 3300048907 Bacteria 10886
130 Ga0496105_0006701 3300048908 Bacteria 8864
131 Ga0496105_0200228 3300048908 Bacteria 1630
132 Ga0496106_0017677 3300048909 Bacteria 5274
133 Ga0496106_0208540 3300048909 Bacteria 1556
134 Ga0496107_0118091 3300048910 Bacteria 1953
135 Ga0496108_0001197 3300048911 Bacteria 20322
136 Ga0496108_0011649 3300048911 Bacteria 7153
137 Ga0496108_0212680 3300048911 Bacteria 1679
138 Ga0496109_0001148 3300048912 Bacteria 22030
139 Ga0496109_0007603 3300048912 Bacteria 9188
140 Ga0496109_0019556 3300048912 Bacteria 5975
141 Ga0496109_0208957 3300048912 Bacteria 1836
142 Ga0496109_0294534 3300048912 Bacteria 1530
143 Ga0496110_0000358 3300048913 Bacteria 30516
144 Ga0496111_0037630 3300048914 Unclassified 3463
145 Ga0496111_0096132 3300048914 Bacteria 2174
146 Ga0496112_0009050 3300048915 Bacteria 8944
147 Ga0496112_0043622 3300048915 Bacteria 4391
148 Ga0496112_0076236 3300048915 Bacteria 3316
149 Ga0496112_0110683 3300048915 Bacteria 2716
150 Ga0496113_0001585 3300048916 Bacteria 12766
151 Ga0496113_0072767 3300048916 Bacteria 2617
152 Ga0496113_0113444 3300048916 Unclassified 2112
153 Ga0496113_0143724 3300048916 Bacteria 1878
154 Ga0496126_0169786 3300048929 Bacteria 1859
155 Ga0501032_0284244 3300049569 Bacteria 1071
156 Ga0501034_0100901 3300049571 Bacteria 2880
157 Ga0501039_0121342 3300049575 Bacteria 2048
158 Ga0501040_0025685 3300049576 Bacteria 3962
159 Ga0501040_0146391 3300049576 Bacteria 1665
160 Ga0501041_0188562 3300049577 Bacteria 1291
161 Ga0501048_0139828 3300049582 Bacteria 1712
162 Ga0501071_0210842 3300049587 Bacteria 1460
163 Ga0501072_0060769 3300049588 Bacteria 2979
164 Ga0501074_0114754 3300049590 Bacteria 1927
165 Ga0501075_0137921 3300049591 Bacteria 1858
166 Ga0501076_0389147 3300049592 Bacteria 1146
167 Ga0501077_0051659 3300049593 Bacteria 2612
168 Ga0501079_0339680 3300049741 Bacteria 1176
169 Ga0501080_0451736 3300049742 Bacteria 1152
170 Ga0501081_0063930 3300049743 Bacteria 2555
171 Ga0501081_0070750 3300049743 Bacteria 2431
172 Ga0501045_0098597 3300049824 Bacteria 2162
173 nmdc:mga05p37_86425_c1 3300050507 Bacteria 3865
174 nmdc:mga0qj67_135843_c1 3300050509 Bacteria 1993
175 Ga0500643_050245 3300053087 Bacteria 1194
176 Ga0501084_0154262 3300054114 Bacteria 1936
177 Ga0466962_0015216 3300061719 Bacteria 3709
178 Ga0466962_0045022 3300061719 Bacteria 2110
179 Ga0466962_0090774 3300061719 Bacteria 1463
180 Ga0530510_0230545 3300061734 Bacteria 1377
181 2623498463 2622736605 Bacteria 4992138
182 Ga0070684_100209394
183 Ga0070682_100360475
184 Ga0070714_100392781
185 Ga0068854_100051877
186 Ga0068864_100066243
187 Ga0068870_10139516
188 Ga0068860_100203553
189 Ga0081455_10195206
190 Ga0075365_10051767
191 Ga0075428_100008726
192 Ga0068865_100106307
193 Ga0105245_10068317
194 Ga0114129_10126172
195 Ga0105243_10129327
196 Ga0105243_10237336
197 Ga0157369_10179188
198 Ga0157372_10628069
199 Ga0163163_10159779
200 Ga0163163_10204073
201 Ga0163163_10337674
202 Ga0163163_10345789
203 Ga0157379_10007262
204 Ga0157379_10393890
205 Ga0206354_11617699
206 Ga0206353_11258446
207 Ga0213876_10008701
208 Ga0213876_10053916
209 Ga0213876_10054924
210 Ga0213875_10018529
211 Ga0207688_10071507
212 Ga0207688_10086871
213 Ga0207705_10235527
214 Ga0207687_10084964
215 Ga0207664_10053194
216 Ga0207661_10144442
217 Ga0207661_10326176
218 Ga0207679_10200842
219 Ga0207668_10069778
220 Ga0207640_10039816
221 Ga0207703_10279054
222 Ga0207678_10304406
223 Ga0207708_10046868
224 Ga0207674_10125746
225 Ga0207675_100187089
226 Ga0307408_100195606
227 Ga0307405_10029082
228 Ga0307405_10294313
229 Ga0307406_10161302
230 Ga0307407_10059639
231 Ga0307412_10068075
232 Ga0307409_100057082
233 Ga0307409_100137867
234 Ga0307416_100020582
235 Ga0307416_100028888
236 Ga0307414_10306835
237 Ga0307411_10059416
238 Ga0307415_100019711
239 Ga0307415_100031568
240 Ga0307415_100102230
241 Ga0307415_100137319
242 Ga0307415_100149090
243 Ga0395900_0043595
244 Ga0395898_0149673
245 Ga0436364_0030466
246 Ga0436364_0192877
247 Ga0436364_0224662
248 Ga0436364_0461490
249 Ga0436364_0653854
250 Ga0436364_0757072
251 Ga0436364_0938553
252 Ga0436364_1097207
253 Ga0436365_0139065
254 Ga0436365_0200437
255 Ga0436365_0851715
256 Ga0436365_0911509
257 Ga0436365_0954298
258 Ga0436365_1249647
259 Ga0436363_0062885
260 Ga0436363_0379825
261 Ga0436363_0542572
262 Ga0436363_1073061
263 Ga0439465_0006965
264 Ga0439455_0031370
265 Ga0439459_0001310
266 Ga0466972_0022761
267 Ga0466966_0028339
268 Ga0466963_0035802
269 Ga0466963_0079334
270 Ga0466963_0110720
271 Ga0466963_0180496
272 Ga0466964_0101375
273 Ga0466971_0054588
274 Ga0466968_0032666
275 Ga0466970_0021999
276 Ga0466970_0028834
277 Ga0466970_0035071
278 Ga0466970_0073243
279 Ga0466970_0100064
280 Ga0466957_0031140
281 Ga0466957_0073796
282 Ga0466957_0103043
283 Ga0466960_0000005
284 Ga0466960_0082522
285 Ga0466960_0112176
286 Ga0466959_0004501
287 Ga0466959_0004650
288 Ga0466959_0142572
289 Ga0466958_0010756
290 Ga0466958_0024798
291 Ga0466958_0044591
292 Ga0466958_0094936
293 Ga0466958_0111604
294 Ga0466958_0141636
295 Ga0466967_0000767
296 Ga0466967_0047775
297 Ga0466967_0084177
298 Ga0466967_0089659
299 Ga0466967_0175267
300 Ga0466967_0544290
301 Ga0495650_0000121
302 Ga0495663_0056970
303 Ga0495615_0009325
304 Ga0496100_0036516
305 Ga0496101_0045249
306 Ga0496101_0085529
307 Ga0496102_0012925
308 Ga0496102_0012942
309 Ga0496104_0005158
310 Ga0496104_0005714
311 Ga0496105_0006701
312 Ga0496105_0200228
313 Ga0496106_0017677
314 Ga0496106_0208540
315 Ga0496107_0118091
316 Ga0496108_0001197
317 Ga0496108_0011649
318 Ga0496108_0212680
319 Ga0496109_0001148
320 Ga0496109_0007603
321 Ga0496109_0019556
322 Ga0496109_0208957
323 Ga0496109_0294534
324 Ga0496110_0000358
325 Ga0496111_0037630
326 Ga0496111_0096132
327 Ga0496112_0009050
328 Ga0496112_0043622
329 Ga0496112_0076236
330 Ga0496112_0110683
331 Ga0496113_0001585
332 Ga0496113_0072767
333 Ga0496113_0113444
334 Ga0496113_0143724
335 Ga0496126_0169786
336 Ga0501032_0284244
337 Ga0501034_0100901
338 Ga0501039_0121342
339 Ga0501040_0025685
340 Ga0501040_0146391
341 Ga0501041_0188562
342 Ga0501048_0139828
343 Ga0501071_0210842
344 Ga0501072_0060769
345 Ga0501074_0114754
346 Ga0501075_0137921
347 Ga0501076_0389147
348 Ga0501077_0051659
349 Ga0501079_0339680
350 Ga0501080_0451736
351 Ga0501081_0063930
352 Ga0501081_0070750
353 Ga0501045_0098597
354 nmdc:mga05p37_86425_c1
355 nmdc:mga0qj67_135843_c1
356 Ga0500643_050245
357 Ga0501084_0154262
358 Ga0466962_0015216
359 Ga0466962_0045022
360 Ga0466962_0090774
361 Ga0530510_0230545
362 2623498463

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14518

Haem_oxygenas_2

Iron-containing redox enzyme

133

311

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6vzy-assembly1.cif.gz_A crystal structure of sznf from streptomyces achromogenes var. streptozoticus nrrl 2697 with a diiron(ii) central domain cofactor 0.8477 47 324
6xcv-assembly1.cif.gz_A crystal structure of apo sznf from streptomyces achromogenes var. streptozoticus nrrl 2697 0.8419 47 324
6vzy-assembly1.cif.gz_B crystal structure of sznf from streptomyces achromogenes var. streptozoticus nrrl 2697 with a diiron(ii) central domain cofactor 0.8414 47 324
6xcv-assembly1.cif.gz_B crystal structure of apo sznf from streptomyces achromogenes var. streptozoticus nrrl 2697 0.8315 47 324
6m9r-assembly1.cif.gz_A crystal structure of sznf from streptomyces achromogenes var. streptozoticus nrrl 2697 with a bound n(delta)-hydroxy-n(omega)-methyl-l-arginine intermediate 0.83 47 324
ID Description Score Start End Superfamily
3bjdA02 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.8766 100 323 1.20.910.10
3bjdA02 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.8692 100 323 1.20.910.10
1rcwC00 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.7862 105 315 1.20.910.10
1rcwC00 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.7762 105 315 1.20.910.10
3b5pA00 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.6811 105 320 1.20.910.10
ID Description Score Start End GO Terms
AF-A0A1B1K6T9-F1-model_v4 Iron-containing redox enzyme family protein 0.9895 152 330
AF-A0A7J9XX92-F1-model_v4 Iron-containing redox enzyme family protein 0.9885 124 301
AF-A0A7W7WVI0-F1-model_v4 Heme oxygenase-like protein 0.9842 44 329
AF-A0A2S8MFG0-F1-model_v4 deleted 0.9818 141 330
AF-A0A6G2UQ11-F1-model_v4 Iron-containing redox enzyme family protein 0.9802 129 334

Map