F276490

General Info

Members Datasets Scaffolds Average Seq Length
180 138 360 1048

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2884634485|2884637668
Length 1199
Sequence TQPAFLVALGATISFAAIVPKTENAPQILEKILQSDSTKKDSLDYPKFKDLPLKPEREVKFTTQEGTWMSLDVSPDGKTIAFDLMGDIYTIPIEGGKATPITTGIAYETHPRFSPDGEKILFTSDRAGNDNLWYIDLVKKDTVQITKDKNGDVPGADWTPDGDYIVVAKGRRITKLWMYHKDGGGGIQLNPDPSSMKTIDPFVSPDGKKIYFSHRTGSWNYNAMLPQYQVGTYDLEEGKITSITSRYGSAFTPTLSADGNWLVYGSRWDDKTGLVIRDLNSGEEKWLAYPVQRDEQESIAPQGVLPAMAFTPDSKNVIASYGGKIWRIPVDGSSAVEIPFEADVKLAMGPRLYFNYEVKDTTAKLATQIRDGVPSPDGKKLAFTALNRLYVMDFPNGEPKRVSNHDFTEAMPSWSPDGTQLVFTTWDEKEGGHLYKASFGRGGAVTKLTQESALYMGPVWGPNGKIVVFKGDKRLMEDSEGPGISGAESILAWIPASGGTVRKIRDARGIGNAHFTQDTSRIYLNGPGGTLLSIQWDGTDEKTHAKITGITPFGSVLDSHDDHEHAELADYRYVMGKPFSNASSLNYCMLPEGVSAQEPQMSPASASTILMAPKGNKALAQVNNNVYVVTIPQVGKTPSINVADPKSSSFPSRQLTEIGGEWPAWEANGEKVHWSLGNGHWVYDIARAEFVEDSVESAEKAKMLAADSVSALKAQGEEAVKLADSLAKAEKQRIDSLFKADKELAKADSIYKAQQKEKETYKPEEYQVKVYFAKDIPSGKILLQNARIITMKDDEVIERGDILIENNRIKAVGATGTLDAAGAEVVDLSGKTVTPGFVDTHAHMWPTWNLHKNTVWIYAANLAYGVTTTRDPQTATTDVLTYADMVEAGMIPGPRVYSTGPGVGYWMYNLKSLEQTKNVLKQYSKYYNTQYIKMYLVGNRQHRQWVIMAAKEQKLMPTTEGGLDFKLNMTQLFDGYPGHEHAIPIYPLYSDVTHTIAESKMAVTPTLLVAYGGPWAENYYYTTESPLHDPKLNRFTPYNEMNSKARRRVGGLGGWFAPEDHVFEDHARGINDIVKRGGLAGIGSHGQLQGLGYHWELWSVASGGMSNMDALRTATILGAEALGLDKELGSIENGKLADLVILSENPLENIRNTNTITHVVKDGRVYDGNTLDEILPTPRKLDVSSWTKEAPKVTTSLEH

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
110 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
111 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
112 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
115 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
116 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
117 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
118 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
119 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
120 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
121 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
124 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
129 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
137 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
138 2739367663 Pedobacter sp. YR510 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.89
Metatranscriptomes 0
Isolates 1.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.22
Nodule 0
Rhizoplane 0
Rhizosphere 93.33
Stem 0
Stem Tuber 0
Unclassified 1.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10005737 3300003203 Bacteria 5738
2 rootH2_10001414 3300003320 Bacteria 59840
3 rootH2_10006462 3300003320 Bacteria 9144
4 rootH2_10027742 3300003320 Bacteria 7991
5 JGI25160J50197_1001190 3300003354 Bacteria 13266
6 Ga0070676_10003525 3300005328 Bacteria 8182
7 Ga0070683_100001460 3300005329 Bacteria 18179
8 Ga0070683_100010466 3300005329 Bacteria 7975
9 Ga0070670_100031547 3300005331 Bacteria 4564
10 Ga0070670_100041618 3300005331 Bacteria 3948
11 Ga0070674_100000197 3300005356 Bacteria 28921
12 Ga0070688_100016049 3300005365 Unclassified 4274
13 Ga0070703_10000245 3300005406 Bacteria 26412
14 Ga0070709_10001947 3300005434 Bacteria 11240
15 Ga0070713_100000084 3300005436 Bacteria 59438
16 Ga0070713_100000107 3300005436 Bacteria 53984
17 Ga0070711_100002143 3300005439 Bacteria 11191
18 Ga0070705_100002366 3300005440 Bacteria 9513
19 Ga0070694_100004366 3300005444 Bacteria 8504
20 Ga0070708_100000007 3300005445 Bacteria 146443
21 Ga0070662_100000040 3300005457 Bacteria 73497
22 Ga0070681_10001175 3300005458 Bacteria 22636
23 Ga0070681_10001587 3300005458 Bacteria 20198
24 Ga0070681_10028608 3300005458 Bacteria 5604
25 Ga0068867_100000144 3300005459 Bacteria 45710
26 Ga0070706_100014177 3300005467 Bacteria 7364
27 Ga0070706_100045016 3300005467 Bacteria 4076
28 Ga0070707_100006120 3300005468 Bacteria 11213
29 Ga0070698_100001382 3300005471 Bacteria 26902
30 Ga0070698_100019149 3300005471 Bacteria 7195
31 Ga0070679_100005962 3300005530 Bacteria 11327
32 Ga0070684_100001515 3300005535 Bacteria 16805
33 Ga0070686_100012442 3300005544 Bacteria 4849
34 Ga0070695_100000533 3300005545 Bacteria 20122
35 Ga0070696_100002435 3300005546 Bacteria 12338
36 Ga0070693_100008266 3300005547 Bacteria 5119
37 Ga0070704_100001416 3300005549 Bacteria 12795
38 Ga0070704_100006325 3300005549 Bacteria 6977
39 Ga0070704_100007303 3300005549 Bacteria 6574
40 Ga0070664_100009492 3300005564 Bacteria 7889
41 Ga0068854_100000896 3300005578 Bacteria 17906
42 Ga0068856_100020156 3300005614 Bacteria 6478
43 Ga0068866_10000371 3300005718 Bacteria 21133
44 Ga0068861_100007563 3300005719 Bacteria 7455
45 Ga0068870_10003137 3300005840 Bacteria 6972
46 Ga0068862_100009202 3300005844 Bacteria 8181
47 Ga0068862_100023137 3300005844 Bacteria 5203
48 Ga0081455_10030093 3300005937 Bacteria 4939
49 Ga0081539_10000914 3300005985 Bacteria 55819
50 Ga0070717_10000256 3300006028 Bacteria 36409
51 Ga0070712_100000106 3300006175 Bacteria 43079
52 Ga0097621_100001501 3300006237 Bacteria 15978
53 Ga0068871_100004024 3300006358 Bacteria 10153
54 Ga0075428_100063780 3300006844 Bacteria 4034
55 Ga0075430_100002355 3300006846 Bacteria 15700
56 Ga0075430_100020815 3300006846 Bacteria 5576
57 Ga0075431_100019592 3300006847 Bacteria 6901
58 Ga0075434_100003213 3300006871 Bacteria 14573
59 Ga0075434_100011742 3300006871 Bacteria 8272
60 Ga0075434_100029228 3300006871 Bacteria 5421
61 Ga0075429_100021828 3300006880 Bacteria 5550
62 Ga0068865_100001358 3300006881 Bacteria 14248
63 Ga0075436_100013163 3300006914 Bacteria 5671
64 Ga0105240_10000071 3300009093 Bacteria 204197
65 Ga0111539_10022829 3300009094 Bacteria 7686
66 Ga0111539_10028145 3300009094 Bacteria 6861
67 Ga0114129_10001858 3300009147 Bacteria 28777
68 Ga0105243_10001466 3300009148 Bacteria 20725
69 Ga0105242_10000578 3300009176 Bacteria 29041
70 Ga0105248_10001515 3300009177 Bacteria 25851
71 Ga0105248_10013678 3300009177 Bacteria 8933
72 Ga0105237_10002712 3300009545 Bacteria 21610
73 Ga0105238_10029858 3300009551 Bacteria 5551
74 Ga0105239_10000126 3300010375 Bacteria 107921
75 Ga0105239_10016009 3300010375 Bacteria 8300
76 Ga0157373_10000127 3300013100 Bacteria 59397
77 Ga0157370_10006167 3300013104 Bacteria 13301
78 Ga0157369_10011780 3300013105 Bacteria 9930
79 Ga0157374_10000001 3300013296 Bacteria 1077351
80 Ga0157378_10001404 3300013297 Bacteria 21665
81 Ga0157378_10026750 3300013297 Bacteria 5086
82 Ga0163162_10006015 3300013306 Bacteria 11744
83 Ga0157372_10000762 3300013307 Bacteria 34920
84 Ga0157375_10004308 3300013308 Bacteria 12343
85 Ga0157380_10011128 3300014326 Bacteria 6491
86 Ga0157376_10001928 3300014969 Bacteria 13861
87 Ga0157376_10002807 3300014969 Bacteria 11899
88 Ga0207426_1000093 3300025302 Bacteria 277663
89 Ga0209257_1000007 3300025304 Bacteria 1564415
90 Ga0207697_10002342 3300025315 Bacteria 9865
91 Ga0207653_10000024 3300025885 Bacteria 117069
92 Ga0207642_10000594 3300025899 Bacteria 11131
93 Ga0207699_10000756 3300025906 Bacteria 15451
94 Ga0207645_10000321 3300025907 Bacteria 39983
95 Ga0207645_10003409 3300025907 Bacteria 12083
96 Ga0207645_10006020 3300025907 Bacteria 8724
97 Ga0207707_10002893 3300025912 Bacteria 15316
98 Ga0207695_10000068 3300025913 Bacteria 324859
99 Ga0207695_10011629 3300025913 Bacteria 10643
100 Ga0207671_10000969 3300025914 Bacteria 35541
101 Ga0207693_10000033 3300025915 Bacteria 114840
102 Ga0207693_10024231 3300025915 Bacteria 4818
103 Ga0207660_10007210 3300025917 Bacteria 7197
104 Ga0207646_10008627 3300025922 Bacteria 10189
105 Ga0207681_10003226 3300025923 Bacteria 10229
106 Ga0207650_10015783 3300025925 Bacteria 5266
107 Ga0207700_10000281 3300025928 Bacteria 30200
108 Ga0207706_10000005 3300025933 Bacteria 224460
109 Ga0207706_10001383 3300025933 Bacteria 24223
110 Ga0207686_10000138 3300025934 Bacteria 57684
111 Ga0207691_10002170 3300025940 Bacteria 19189
112 Ga0207691_10005837 3300025940 Bacteria 11908
113 Ga0207711_10001937 3300025941 Bacteria 18789
114 Ga0207711_10015553 3300025941 Bacteria 6315
115 Ga0207689_10002089 3300025942 Bacteria 18836
116 Ga0207689_10035208 3300025942 Unclassified 4159
117 Ga0207661_10001064 3300025944 Bacteria 18252
118 Ga0207712_10009479 3300025961 Bacteria 6160
119 Ga0207708_10011679 3300026075 Bacteria 6543
120 Ga0207708_10042282 3300026075 Bacteria 3474
121 Ga0207648_10000021 3300026089 Bacteria 139257
122 Ga0207648_10016670 3300026089 Bacteria 6704
123 Ga0207648_10030427 3300026089 Bacteria 4782
124 Ga0207674_10002911 3300026116 Bacteria 21255
125 Ga0207674_10006963 3300026116 Bacteria 13233
126 Ga0207674_10027959 3300026116 Bacteria 5959
127 Ga0207675_100002995 3300026118 Bacteria 16589
128 Ga0207675_100015672 3300026118 Bacteria 7069
129 Ga0207683_10014681 3300026121 Bacteria 6670
130 Ga0268265_10021434 3300028380 Bacteria 4526
131 Ga0307515_10000514 3300028794 Bacteria 92292
132 Ga0307509_10003342 3300031507 Bacteria 24514
133 Ga0307414_10000016 3300032004 Bacteria 249029
134 Ga0307510_10002525 3300033180 Bacteria 20862
135 Ga0373946_0006263 3300035171 Bacteria 4311
136 Ga0373935_0005542 3300035692 Bacteria 7436
137 Ga0373927_0007657 3300035695 Bacteria 7307
138 Ga0373937_0002100 3300036401 Bacteria 16660
139 Ga0451577_0006282 3300042876 Bacteria 11896
140 Ga0453684_0003872 3300044712 Bacteria 32941
141 Ga0453684_0020375 3300044712 Bacteria 10008
142 Ga0451576_0004464 3300045051 Bacteria 18132
143 Ga0451576_0005497 3300045051 Bacteria 15842
144 Ga0451576_0025622 3300045051 Bacteria 6353
145 Ga0451576_0064948 3300045051 Bacteria 3801
146 Ga0495580_0008330 3300046472 Bacteria 8246
147 Ga0495582_0001187 3300046473 Bacteria 14673
148 Ga0495639_0000164 3300046475 Bacteria 34571
149 Ga0495628_0021642 3300046516 Bacteria 5286
150 Ga0495652_0006078 3300046529 Bacteria 11285
151 Ga0495665_0000538 3300046531 Bacteria 19201
152 Ga0495587_0011325 3300046536 Bacteria 5650
153 Ga0495645_0009159 3300046543 Bacteria 6916
154 Ga0495645_0018626 3300046543 Bacteria 4988
155 Ga0495667_0001249 3300046559 Bacteria 16661
156 Ga0495611_0000130 3300046648 Bacteria 52232
157 Ga0495625_0020593 3300046660 Bacteria 5089
158 Ga0495588_0001011 3300046674 Bacteria 12229
159 Ga0495599_0003424 3300046678 Bacteria 9284
160 Ga0495623_0001912 3300046679 Bacteria 13979
161 Ga0495613_0007637 3300046689 Bacteria 8044
162 Ga0495600_0012465 3300046809 Bacteria 5317
163 Ga0495672_0024186 3300047320 Bacteria 3918
164 Ga0495684_0003053 3300047471 Bacteria 13170
165 Ga0495686_0000078 3300047472 Bacteria 203927
166 Ga0495593_0000219 3300047673 Bacteria 30411
167 Ga0495614_0000542 3300048089 Bacteria 15618
168 Ga0501284_00086 3300050005 Bacteria 22701
169 nmdc:mga05p37_133213_c1 3300050507 Bacteria 3049
170 nmdc:mga05p37_3267_c1 3300050507 Bacteria 18885
171 nmdc:mga05p37_47551_c1 3300050507 Bacteria 5276
172 nmdc:mga0qj67_4818_c1 3300050509 Bacteria 9802
173 nmdc:mga08y16_38640_c2 3300050511 Unclassified 3914
174 nmdc:mga0n895_11030_c1 3300050512 Bacteria 8034
175 nmdc:mga0n895_5524_c1 3300050512 Bacteria 10585
176 nmdc:mga08x19_9672_c1 3300050514 Bacteria 5773
177 nmdc:mga0a205_3836_c1 3300050515 Bacteria 13470
178 Ga0500616_0022856 3300053153 Bacteria 3490
179 2884637668 2884634485 Bacteria 3928637
180 2739647616 2739367663 Bacteria 5040914
181 JGI25406J46586_10005737
182 rootH2_10001414
183 rootH2_10006462
184 rootH2_10027742
185 JGI25160J50197_1001190
186 Ga0070676_10003525
187 Ga0070683_100001460
188 Ga0070683_100010466
189 Ga0070670_100031547
190 Ga0070670_100041618
191 Ga0070674_100000197
192 Ga0070688_100016049
193 Ga0070703_10000245
194 Ga0070709_10001947
195 Ga0070713_100000084
196 Ga0070713_100000107
197 Ga0070711_100002143
198 Ga0070705_100002366
199 Ga0070694_100004366
200 Ga0070708_100000007
201 Ga0070662_100000040
202 Ga0070681_10001175
203 Ga0070681_10001587
204 Ga0070681_10028608
205 Ga0068867_100000144
206 Ga0070706_100014177
207 Ga0070706_100045016
208 Ga0070707_100006120
209 Ga0070698_100001382
210 Ga0070698_100019149
211 Ga0070679_100005962
212 Ga0070684_100001515
213 Ga0070686_100012442
214 Ga0070695_100000533
215 Ga0070696_100002435
216 Ga0070693_100008266
217 Ga0070704_100001416
218 Ga0070704_100006325
219 Ga0070704_100007303
220 Ga0070664_100009492
221 Ga0068854_100000896
222 Ga0068856_100020156
223 Ga0068866_10000371
224 Ga0068861_100007563
225 Ga0068870_10003137
226 Ga0068862_100009202
227 Ga0068862_100023137
228 Ga0081455_10030093
229 Ga0081539_10000914
230 Ga0070717_10000256
231 Ga0070712_100000106
232 Ga0097621_100001501
233 Ga0068871_100004024
234 Ga0075428_100063780
235 Ga0075430_100002355
236 Ga0075430_100020815
237 Ga0075431_100019592
238 Ga0075434_100003213
239 Ga0075434_100011742
240 Ga0075434_100029228
241 Ga0075429_100021828
242 Ga0068865_100001358
243 Ga0075436_100013163
244 Ga0105240_10000071
245 Ga0111539_10022829
246 Ga0111539_10028145
247 Ga0114129_10001858
248 Ga0105243_10001466
249 Ga0105242_10000578
250 Ga0105248_10001515
251 Ga0105248_10013678
252 Ga0105237_10002712
253 Ga0105238_10029858
254 Ga0105239_10000126
255 Ga0105239_10016009
256 Ga0157373_10000127
257 Ga0157370_10006167
258 Ga0157369_10011780
259 Ga0157374_10000001
260 Ga0157378_10001404
261 Ga0157378_10026750
262 Ga0163162_10006015
263 Ga0157372_10000762
264 Ga0157375_10004308
265 Ga0157380_10011128
266 Ga0157376_10001928
267 Ga0157376_10002807
268 Ga0207426_1000093
269 Ga0209257_1000007
270 Ga0207697_10002342
271 Ga0207653_10000024
272 Ga0207642_10000594
273 Ga0207699_10000756
274 Ga0207645_10000321
275 Ga0207645_10003409
276 Ga0207645_10006020
277 Ga0207707_10002893
278 Ga0207695_10000068
279 Ga0207695_10011629
280 Ga0207671_10000969
281 Ga0207693_10000033
282 Ga0207693_10024231
283 Ga0207660_10007210
284 Ga0207646_10008627
285 Ga0207681_10003226
286 Ga0207650_10015783
287 Ga0207700_10000281
288 Ga0207706_10000005
289 Ga0207706_10001383
290 Ga0207686_10000138
291 Ga0207691_10002170
292 Ga0207691_10005837
293 Ga0207711_10001937
294 Ga0207711_10015553
295 Ga0207689_10002089
296 Ga0207689_10035208
297 Ga0207661_10001064
298 Ga0207712_10009479
299 Ga0207708_10011679
300 Ga0207708_10042282
301 Ga0207648_10000021
302 Ga0207648_10016670
303 Ga0207648_10030427
304 Ga0207674_10002911
305 Ga0207674_10006963
306 Ga0207674_10027959
307 Ga0207675_100002995
308 Ga0207675_100015672
309 Ga0207683_10014681
310 Ga0268265_10021434
311 Ga0307515_10000514
312 Ga0307509_10003342
313 Ga0307414_10000016
314 Ga0307510_10002525
315 Ga0373946_0006263
316 Ga0373935_0005542
317 Ga0373927_0007657
318 Ga0373937_0002100
319 Ga0451577_0006282
320 Ga0453684_0003872
321 Ga0453684_0020375
322 Ga0451576_0004464
323 Ga0451576_0005497
324 Ga0451576_0025622
325 Ga0451576_0064948
326 Ga0495580_0008330
327 Ga0495582_0001187
328 Ga0495639_0000164
329 Ga0495628_0021642
330 Ga0495652_0006078
331 Ga0495665_0000538
332 Ga0495587_0011325
333 Ga0495645_0009159
334 Ga0495645_0018626
335 Ga0495667_0001249
336 Ga0495611_0000130
337 Ga0495625_0020593
338 Ga0495588_0001011
339 Ga0495599_0003424
340 Ga0495623_0001912
341 Ga0495613_0007637
342 Ga0495600_0012465
343 Ga0495672_0024186
344 Ga0495684_0003053
345 Ga0495686_0000078
346 Ga0495593_0000219
347 Ga0495614_0000542
348 Ga0501284_00086
349 nmdc:mga05p37_133213_c1
350 nmdc:mga05p37_3267_c1
351 nmdc:mga05p37_47551_c1
352 nmdc:mga0qj67_4818_c1
353 nmdc:mga08y16_38640_c2
354 nmdc:mga0n895_11030_c1
355 nmdc:mga0n895_5524_c1
356 nmdc:mga08x19_9672_c1
357 nmdc:mga0a205_3836_c1
358 Ga0500616_0022856
359 2884637668
360 2739647616

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07676

PD40

WD40-like Beta Propeller Repeat

399

434

0.95

PF07676

PD40

WD40-like Beta Propeller Repeat

240

267

0.91

PF07676

PD40

WD40-like Beta Propeller Repeat

98

134

0.91

PF07969

Amidohydro_3

Amidohydrolase family

1090

1166

0.89

PF07676

PD40

WD40-like Beta Propeller Repeat

197

220

0.86

PF01979

Amidohydro_1

Amidohydrolase family

1058

1166

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mtw-assembly1.cif.gz_A crystal structure of l-lysine, l-arginine carboxypeptidase cc2672 from caulobacter crescentus cb15 complexed with n-methyl phosphonate derivative of l-arginine 0.8191 686 1040
2qs8-assembly1.cif.gz_A crystal structure of a xaa-pro dipeptidase with bound methionine in the active site 0.8074 688 1044
2w8b-assembly1.cif.gz_A crystal structure of processed tolb in complex with pal 0.7962 70 333
3be7-assembly1.cif.gz_G crystal structure of zn-dependent arginine carboxypeptidase 0.7932 688 1044
6r5x-assembly1.cif.gz_A 8-bladed beta-propeller formed by four 2-bladed fragments 0.7925 362 437
ID Description Score Start End Superfamily
af_A0A1D6IKV5_444_566_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8648 112 192 2.120.10.30
3gnhA01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.8567 689 744 2.30.40.10
af_A0A1D6GDM6_475_615_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8546 103 218 2.120.10.30
4v1xE01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.847 686 742 2.30.40.10
4ub9B01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.8458 683 744 2.30.40.10
ID Description Score Start End GO Terms
AF-A0A356WYG0-F1-model_v4 Amidohydrolase 0.9652 759 919 GO:0016787
AF-A0A6L4Z411-F1-model_v4 Amidohydrolase 0.9396 892 1059 GO:0016810
AF-A0A7C3GAS3-F1-model_v4 Amidohydrolase 0.9358 734 1059 GO:0016810
AF-A0A2E6S2U6-F1-model_v4 Amidohydrolase 0.933 855 1059 GO:0016810
AF-A0A534G9D1-F1-model_v4 Amidohydrolase-related domain-containing protein 0.9317 699 1073 GO:0016810

Map