F275935

General Info

Members Datasets Scaffolds Average Seq Length
180 114 360 934

Family's Representative Sequence

Representative Sequence 3300035695|Ga0373927_0009276|Ga0373927_0009276_3164_6403
Length 1073
Sequence MLRAASQLKGSGYRLAGSGHKEMGVLRLLRAEPLKIRASRLNPLGVQGATPRRDSSRVKPATGLSMGLGTLIKGSSWCGVVGRTRLTLALLGLLIPAVLLSARPEAQSQAKSQPSDKATAADQSKSTQTLDEPRDHTPQVNKQNPFETVPEASQVPVQSIKPRFETPTPASPETPSQSTVEAIEFRGMRRIPQDTLRALIFSKAGDIYNREALHRDFMALWNTGRFDDIRTETEPGRTGVIVRFVVVERRVVRAIKYENMKSVTVSEVLGRFKERNVGLSVESQYDPSKVQHAGIVLKAFLAERGRQFATVDPEVLPVPPSSLAIIFNVHEGPKVKVGTIDIQGNRVFSDRTVIRAMTNLRPIGIPHSLFLEDLYARTYDSSKLEEDKDRIRQFYQDHGYFMAHVLDATVNLRDSGGGRMRMSLLKSSMPGKRADISIPVEEGQMYRLSKMTFVDVKLFRTTNFLQKTVFQINDGEVFSTAKLRKGIEEMKKLYGQFGYIDFVLEPSFNPLPQTGKIDVTLVADEGKQFFVRRIDFSGNTTTRDKVIRRELLLDEGDIFNNRLWELSILRLNQLGYFEVLKAEDAATIQRNTQNNTVDITLRVKERGKNSIGLNGGLSGIAGSFVGFNYSTNNFLGLGETLSLESQLGTRLRDVSIGFTEPYFLDRPIQVGFVAYLRRFNYNQGREISLLSGQNLTPLFNALGQNNLLNYIQNSHGADVSASKMLRRTFARVGITYGFDDSSIITTNNTSTQYFQYINFQGVSGPNAFSGIKTSSVTPSFSYNTVNHPIDPTNGKSIFLSTQVSGSFLGGNVNTIRPTLDLKYFRPNPLYHKHILAFHLTGSLLTGYGGKVAPPFARSFIGGEQDIRGFDVWGITPIAFIASEATVNIYNNDGTPRKQTIVVNGVPTLVNATMNIPTYQLITPGGDTQAIVNCEYRVRIFGPVTLALFFDAGANRILLPDQLTMNPTRVAQLNAIYPQANFNGQVKIAPGTQNLRSSTGIELQVLLPIVQAPFRVYWAYNPLRVDENLQTPIVADRSMFPNNATFLHAIATFGRVFPFFEKASTFRFTIGRTF

Samples

Sample ID Description Type Environment
1 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
46 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
74 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
75 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
76 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
77 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
78 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
79 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
80 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
81 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
82 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
83 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
86 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
87 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
99 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
100 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
101 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
102 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
103 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
104 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
105 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
106 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
111 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
112 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
113 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
114 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.56
Rhizosphere 92.22
Stem 0
Stem Tuber 0
Unclassified 1.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373927_0009276 3300035695 Bacteria 6598
2 Ga0070658_10008216 3300005327 Bacteria 8392
3 Ga0070683_100000008 3300005329 Bacteria 329206
4 Ga0070683_100013013 3300005329 Bacteria 7243
5 Ga0070683_100013670 3300005329 Bacteria 7088
6 Ga0070683_100024510 3300005329 Bacteria 5405
7 Ga0068869_100002908 3300005334 Bacteria 10402
8 Ga0070680_100000452 3300005336 Bacteria 27922
9 Ga0070660_100003323 3300005339 Bacteria 11050
10 Ga0070689_100036860 3300005340 Bacteria 3740
11 Ga0070691_10005586 3300005341 Bacteria 5723
12 Ga0070688_100015514 3300005365 Bacteria 4338
13 Ga0070714_100008855 3300005435 Bacteria 7872
14 Ga0070713_100000494 3300005436 Bacteria 25196
15 Ga0070713_100006102 3300005436 Bacteria 8312
16 Ga0070713_100010792 3300005436 Bacteria 6618
17 Ga0070713_100040367 3300005436 Bacteria 3794
18 Ga0070711_100000111 3300005439 Bacteria 42762
19 Ga0070663_100012434 3300005455 Bacteria 5384
20 Ga0070681_10000691 3300005458 Bacteria 27990
21 Ga0070707_100042741 3300005468 Bacteria 4339
22 Ga0070679_100022721 3300005530 Bacteria 6133
23 Ga0070684_100023133 3300005535 Bacteria 5190
24 Ga0070696_100001652 3300005546 Bacteria 14612
25 Ga0070665_100028094 3300005548 Bacteria 5666
26 Ga0068855_100001555 3300005563 Bacteria 28835
27 Ga0068855_100013232 3300005563 Bacteria 9950
28 Ga0068855_100030976 3300005563 Bacteria 6392
29 Ga0068855_100066837 3300005563 Bacteria 4191
30 Ga0068857_100018722 3300005577 Bacteria 6078
31 Ga0068856_100003090 3300005614 Bacteria 16990
32 Ga0068856_100023838 3300005614 Bacteria 5952
33 Ga0068856_100064422 3300005614 Bacteria 3621
34 Ga0068852_100026138 3300005616 Bacteria 4741
35 Ga0068859_100019550 3300005617 Bacteria 6805
36 Ga0068858_100004765 3300005842 Bacteria 13285
37 Ga0068858_100017939 3300005842 Bacteria 6629
38 Ga0068858_100034177 3300005842 Bacteria 4715
39 Ga0081455_10019047 3300005937 Bacteria 6510
40 Ga0075430_100024188 3300006846 Bacteria 5171
41 Ga0075431_100006421 3300006847 Bacteria 11669
42 Ga0097620_100019550 3300006931 Bacteria 6805
43 Ga0105240_10001238 3300009093 Bacteria 44337
44 Ga0105240_10002120 3300009093 Bacteria 32421
45 Ga0105240_10026130 3300009093 Bacteria 7662
46 Ga0105240_10030432 3300009093 Bacteria 7016
47 Ga0105245_10000798 3300009098 Bacteria 28575
48 Ga0105245_10001328 3300009098 Bacteria 22372
49 Ga0105245_10001717 3300009098 Bacteria 19974
50 Ga0105241_10005815 3300009174 Bacteria 9108
51 Ga0105248_10002325 3300009177 Bacteria 21083
52 Ga0105248_10007347 3300009177 Bacteria 12090
53 Ga0105237_10000817 3300009545 Bacteria 42586
54 Ga0105237_10012282 3300009545 Bacteria 9027
55 Ga0105237_10026501 3300009545 Bacteria 5925
56 Ga0105238_10001910 3300009551 Bacteria 20933
57 Ga0105238_10021341 3300009551 Bacteria 6600
58 Ga0105238_10047825 3300009551 Bacteria 4312
59 Ga0105249_10019965 3300009553 Bacteria 5983
60 Ga0105246_10005465 3300011119 Bacteria 7740
61 Ga0157370_10006297 3300013104 Bacteria 13124
62 Ga0157370_10006762 3300013104 Bacteria 12580
63 Ga0157369_10000465 3300013105 Bacteria 53725
64 Ga0157369_10006734 3300013105 Bacteria 13258
65 Ga0157369_10015972 3300013105 Bacteria 8447
66 Ga0157374_10002381 3300013296 Bacteria 15849
67 Ga0157374_10007050 3300013296 Bacteria 9568
68 Ga0157378_10012831 3300013297 Bacteria 7334
69 Ga0163163_10025191 3300014325 Bacteria 5670
70 Ga0157379_10013471 3300014968 Bacteria 7165
71 Ga0213872_10000207 3300021361 Bacteria 52310
72 Ga0213875_10000017 3300021388 Bacteria 239813
73 Ga0213875_10000084 3300021388 Bacteria 109683
74 Ga0213875_10001519 3300021388 Bacteria 14919
75 Ga0213875_10008874 3300021388 Bacteria 5128
76 Ga0207654_10007750 3300025911 Bacteria 5420
77 Ga0207707_10001837 3300025912 Bacteria 19455
78 Ga0207695_10004463 3300025913 Bacteria 19067
79 Ga0207695_10005215 3300025913 Bacteria 17374
80 Ga0207695_10005444 3300025913 Bacteria 16882
81 Ga0207695_10012992 3300025913 Bacteria 9948
82 Ga0207671_10008686 3300025914 Bacteria 8576
83 Ga0207671_10033901 3300025914 Bacteria 3796
84 Ga0207694_10001817 3300025924 Bacteria 17772
85 Ga0207694_10003369 3300025924 Bacteria 12726
86 Ga0207694_10007743 3300025924 Bacteria 8132
87 Ga0207687_10001533 3300025927 Bacteria 15853
88 Ga0207687_10004662 3300025927 Bacteria 9119
89 Ga0207700_10001995 3300025928 Bacteria 11639
90 Ga0207686_10005586 3300025934 Bacteria 6743
91 Ga0207711_10001367 3300025941 Bacteria 22990
92 Ga0207711_10030260 3300025941 Bacteria 4566
93 Ga0207689_10000682 3300025942 Bacteria 32408
94 Ga0207661_10000008 3300025944 Bacteria 451211
95 Ga0207661_10010857 3300025944 Bacteria 6573
96 Ga0207661_10014854 3300025944 Bacteria 5712
97 Ga0207661_10016564 3300025944 Bacteria 5440
98 Ga0207667_10000853 3300025949 Bacteria 39252
99 Ga0207667_10001251 3300025949 Bacteria 31853
100 Ga0207667_10008957 3300025949 Bacteria 11838
101 Ga0207712_10019982 3300025961 Bacteria 4381
102 Ga0207703_10004615 3300026035 Bacteria 11262
103 Ga0207703_10013725 3300026035 Bacteria 6314
104 Ga0207703_10023822 3300026035 Bacteria 4814
105 Ga0207674_10000383 3300026116 Bacteria 57643
106 Ga0207674_10036380 3300026116 Bacteria 5131
107 Ga0207698_10015799 3300026142 Bacteria 5070
108 Ga0207698_10049199 3300026142 Bacteria 3207
109 Ga0268266_10017258 3300028379 Bacteria 6164
110 Ga0268266_10021522 3300028379 Bacteria 5494
111 Ga0268264_10010243 3300028381 Bacteria 7760
112 Ga0265323_10000202 3300028653 Bacteria 35972
113 Ga0265320_10003490 3300031240 Bacteria 10538
114 Ga0265325_10013993 3300031241 Unclassified 4550
115 Ga0265316_10000612 3300031344 Bacteria 39686
116 Ga0265316_10002892 3300031344 Bacteria 17555
117 Ga0265314_10000776 3300031711 Bacteria 37903
118 Ga0373927_0000242 3300035695 Bacteria 42856
119 Ga0373927_0000509 3300035695 Bacteria 29593
120 Ga0373927_0002104 3300035695 Bacteria 14694
121 Ga0373937_0002942 3300036401 Bacteria 14250
122 Ga0373937_0008245 3300036401 Bacteria 9046
123 Ga0373937_0061337 3300036401 Bacteria 3457
124 Ga0373925_0000027 3300037068 Bacteria 154706
125 Ga0373925_0009806 3300037068 Bacteria 6955
126 Ga0436364_0024009 3300037853 Bacteria 9152
127 Ga0436364_0339530 3300037853 Bacteria 240640
128 Ga0436364_0880534 3300037853 Bacteria 127762
129 Ga0436364_1110298 3300037853 Bacteria 6333
130 Ga0436364_1374344 3300037853 Bacteria 9454
131 Ga0436364_1443643 3300037853 Bacteria 3786
132 Ga0436364_1483439 3300037853 Bacteria 13565
133 Ga0436365_0027270 3300039437 Bacteria 19731
134 Ga0436360_0064410 3300039438 Bacteria 8250
135 Ga0436361_1052449 3300039447 Bacteria 57332
136 Ga0436362_1261111 3300039453 Bacteria 5721
137 Ga0495580_0001837 3300046472 Bacteria 18662
138 Ga0495580_0007063 3300046472 Bacteria 9049
139 Ga0495580_0015855 3300046472 Bacteria 5672
140 Ga0495580_0028725 3300046472 Unclassified 4042
141 Ga0495628_0008551 3300046516 Bacteria 8770
142 Ga0495630_0020743 3300046517 Bacteria 4848
143 Ga0495652_0022315 3300046529 Bacteria 5617
144 Ga0495587_0006132 3300046536 Bacteria 7845
145 Ga0495645_0006719 3300046543 Bacteria 7992
146 Ga0495674_0019018 3300047319 Bacteria 6385
147 Ga0495680_0036887 3300047322 Bacteria 3920
148 Ga0495684_0001690 3300047471 Bacteria 17741
149 Ga0495602_0016698 3300048088 Bacteria 7376
150 Ga0496112_0005898 3300048915 Bacteria 10678
151 Ga0496126_0018180 3300048929 Bacteria 6974
152 Ga0501031_0002671 3300049568 Bacteria 11352
153 Ga0501032_0001823 3300049569 Bacteria 16841
154 Ga0501033_0022432 3300049570 Bacteria 4762
155 Ga0501036_0000670 3300049572 Bacteria 25145
156 Ga0501037_0003507 3300049573 Bacteria 11382
157 Ga0501038_0009706 3300049574 Bacteria 8825
158 Ga0501043_0004945 3300049579 Bacteria 10777
159 Ga0501046_0004216 3300049580 Bacteria 13085
160 Ga0501047_0020037 3300049581 Bacteria 6422
161 Ga0501048_0011180 3300049582 Bacteria 6691
162 Ga0501067_0000569 3300049583 Bacteria 19959
163 Ga0501068_0001464 3300049584 Bacteria 12569
164 Ga0501069_0000389 3300049585 Bacteria 19849
165 Ga0501070_0004743 3300049586 Bacteria 11636
166 Ga0501072_0000443 3300049588 Bacteria 29678
167 Ga0501073_0001912 3300049589 Bacteria 15514
168 Ga0501076_0010155 3300049592 Bacteria 6974
169 Ga0501077_0014075 3300049593 Bacteria 5018
170 Ga0501079_0003177 3300049741 Bacteria 12032
171 Ga0501080_0000281 3300049742 Bacteria 38399
172 Ga0501083_0018243 3300049744 Bacteria 4890
173 Ga0501035_0017888 3300049822 Bacteria 6538
174 Ga0501044_0014707 3300049823 Bacteria 8438
175 nmdc:mga06r32_13926_c1 3300050510 Bacteria 7296
176 nmdc:mga08x19_1109_c1 3300050514 Bacteria 16795
177 nmdc:mga08x19_2591_c1 3300050514 Bacteria 10977
178 nmdc:mga08x19_39303_c1 3300050514 Bacteria 3007
179 Ga0501084_0000737 3300054114 Bacteria 24973
180 Ga0501082_0000279 3300060353 Bacteria 45163
181 Ga0373927_0009276
182 Ga0070658_10008216
183 Ga0070683_100000008
184 Ga0070683_100013013
185 Ga0070683_100013670
186 Ga0070683_100024510
187 Ga0068869_100002908
188 Ga0070680_100000452
189 Ga0070660_100003323
190 Ga0070689_100036860
191 Ga0070691_10005586
192 Ga0070688_100015514
193 Ga0070714_100008855
194 Ga0070713_100000494
195 Ga0070713_100006102
196 Ga0070713_100010792
197 Ga0070713_100040367
198 Ga0070711_100000111
199 Ga0070663_100012434
200 Ga0070681_10000691
201 Ga0070707_100042741
202 Ga0070679_100022721
203 Ga0070684_100023133
204 Ga0070696_100001652
205 Ga0070665_100028094
206 Ga0068855_100001555
207 Ga0068855_100013232
208 Ga0068855_100030976
209 Ga0068855_100066837
210 Ga0068857_100018722
211 Ga0068856_100003090
212 Ga0068856_100023838
213 Ga0068856_100064422
214 Ga0068852_100026138
215 Ga0068859_100019550
216 Ga0068858_100004765
217 Ga0068858_100017939
218 Ga0068858_100034177
219 Ga0081455_10019047
220 Ga0075430_100024188
221 Ga0075431_100006421
222 Ga0097620_100019550
223 Ga0105240_10001238
224 Ga0105240_10002120
225 Ga0105240_10026130
226 Ga0105240_10030432
227 Ga0105245_10000798
228 Ga0105245_10001328
229 Ga0105245_10001717
230 Ga0105241_10005815
231 Ga0105248_10002325
232 Ga0105248_10007347
233 Ga0105237_10000817
234 Ga0105237_10012282
235 Ga0105237_10026501
236 Ga0105238_10001910
237 Ga0105238_10021341
238 Ga0105238_10047825
239 Ga0105249_10019965
240 Ga0105246_10005465
241 Ga0157370_10006297
242 Ga0157370_10006762
243 Ga0157369_10000465
244 Ga0157369_10006734
245 Ga0157369_10015972
246 Ga0157374_10002381
247 Ga0157374_10007050
248 Ga0157378_10012831
249 Ga0163163_10025191
250 Ga0157379_10013471
251 Ga0213872_10000207
252 Ga0213875_10000017
253 Ga0213875_10000084
254 Ga0213875_10001519
255 Ga0213875_10008874
256 Ga0207654_10007750
257 Ga0207707_10001837
258 Ga0207695_10004463
259 Ga0207695_10005215
260 Ga0207695_10005444
261 Ga0207695_10012992
262 Ga0207671_10008686
263 Ga0207671_10033901
264 Ga0207694_10001817
265 Ga0207694_10003369
266 Ga0207694_10007743
267 Ga0207687_10001533
268 Ga0207687_10004662
269 Ga0207700_10001995
270 Ga0207686_10005586
271 Ga0207711_10001367
272 Ga0207711_10030260
273 Ga0207689_10000682
274 Ga0207661_10000008
275 Ga0207661_10010857
276 Ga0207661_10014854
277 Ga0207661_10016564
278 Ga0207667_10000853
279 Ga0207667_10001251
280 Ga0207667_10008957
281 Ga0207712_10019982
282 Ga0207703_10004615
283 Ga0207703_10013725
284 Ga0207703_10023822
285 Ga0207674_10000383
286 Ga0207674_10036380
287 Ga0207698_10015799
288 Ga0207698_10049199
289 Ga0268266_10017258
290 Ga0268266_10021522
291 Ga0268264_10010243
292 Ga0265323_10000202
293 Ga0265320_10003490
294 Ga0265325_10013993
295 Ga0265316_10000612
296 Ga0265316_10002892
297 Ga0265314_10000776
298 Ga0373927_0000242
299 Ga0373927_0000509
300 Ga0373927_0002104
301 Ga0373937_0002942
302 Ga0373937_0008245
303 Ga0373937_0061337
304 Ga0373925_0000027
305 Ga0373925_0009806
306 Ga0436364_0024009
307 Ga0436364_0339530
308 Ga0436364_0880534
309 Ga0436364_1110298
310 Ga0436364_1374344
311 Ga0436364_1443643
312 Ga0436364_1483439
313 Ga0436365_0027270
314 Ga0436360_0064410
315 Ga0436361_1052449
316 Ga0436362_1261111
317 Ga0495580_0001837
318 Ga0495580_0007063
319 Ga0495580_0015855
320 Ga0495580_0028725
321 Ga0495628_0008551
322 Ga0495630_0020743
323 Ga0495652_0022315
324 Ga0495587_0006132
325 Ga0495645_0006719
326 Ga0495674_0019018
327 Ga0495680_0036887
328 Ga0495684_0001690
329 Ga0495602_0016698
330 Ga0496112_0005898
331 Ga0496126_0018180
332 Ga0501031_0002671
333 Ga0501032_0001823
334 Ga0501033_0022432
335 Ga0501036_0000670
336 Ga0501037_0003507
337 Ga0501038_0009706
338 Ga0501043_0004945
339 Ga0501046_0004216
340 Ga0501047_0020037
341 Ga0501048_0011180
342 Ga0501067_0000569
343 Ga0501068_0001464
344 Ga0501069_0000389
345 Ga0501070_0004743
346 Ga0501072_0000443
347 Ga0501073_0001912
348 Ga0501076_0010155
349 Ga0501077_0014075
350 Ga0501079_0003177
351 Ga0501080_0000281
352 Ga0501083_0018243
353 Ga0501035_0017888
354 Ga0501044_0014707
355 nmdc:mga06r32_13926_c1
356 nmdc:mga08x19_1109_c1
357 nmdc:mga08x19_2591_c1
358 nmdc:mga08x19_39303_c1
359 Ga0501084_0000737
360 Ga0501082_0000279

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07244

POTRA

Surface antigen variable number repeat

178

249

0.96

PF07244

POTRA

Surface antigen variable number repeat

529

606

0.89

PF01103

Omp85

Omp85 superfamily domain

633

1073

0.87

PF07244

POTRA

Surface antigen variable number repeat

446

526

0.83

PF07244

POTRA

Surface antigen variable number repeat

335

443

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q6b-assembly1.cif.gz_A the high-resolution and new form crystal structure of bama potra4-5 from e.coli 0.871 326 483
3q6b-assembly1.cif.gz_A the high-resolution and new form crystal structure of bama potra4-5 from e.coli 0.8658 326 483
5efr-assembly1.cif.gz_A crystal structure of a bama-bamd fusion 0.8282 325 488
6izs-assembly1.cif.gz_A crystal structure of haemophilus influenzae bama potra4 0.8258 127 212
4n74-assembly1.cif.gz_A crystal structure of outer membrane protein tama beta-barrel domain in e.coli 0.8105 485 900
ID Description Score Start End Superfamily
af_I1MDA6_263_342_3.10.20.310 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.927 59 127 3.10.20.310
2x8xX03 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.9105 56 127 3.10.20.310
2x8xX01 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.8936 56 126 3.10.20.310
4bzaA03 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.8822 56 127 3.10.20.310
5aywA05 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.8605 407 485 3.10.20.310
ID Description Score Start End GO Terms
AF-A0A7W1YB81-F1-model_v4 Outer membrane protein assembly factor BamA 0.8978 54 210 GO:0019867
AF-A0A7C1S3J2-F1-model_v4 Outer membrane protein assembly factor BamA 0.8933 55 321 GO:0019867
AF-A0A7V5VE72-F1-model_v4 POTRA domain-containing protein 0.8834 127 233 GO:0019867
AF-A0A837Q2B8-F1-model_v4 deleted 0.8789 97 236
AF-A0A399T1X5-F1-model_v4 Peptidase M56 domain-containing protein 0.8764 326 484 GO:0019867

Map