F275665

General Info

Members Datasets Scaffolds Average Seq Length
180 112 360 226

Family's Representative Sequence

Representative Sequence 3300021384|Ga0213876_10049347|Ga0213876_100493473
Length 234
Sequence MTDVEPDEDENQPAWRQRAVSRSLDAARSRAEKRVQRFLDAAFELMDEKGTTDFTIQEVIDRSKQSLRGFYQYFDGKDELLLALFEETIHESIDDLRAVIETEDLPLERLRVFVVRLHEWCDPSGTGKRGSHNRRPVSEFSVQLAGNHPERVKAALEPVSQMLVELLEIAAGAGDIEVTDRRRTAALVLQTVMYSWFGNRLAQNAKLRITADETWQFLLGGLRARTASAASRRR

Samples

Sample ID Description Type Environment
1 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
38 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
53 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
54 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
55 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
64 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
68 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
69 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
70 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
73 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
74 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
75 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
76 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
77 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
78 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
79 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
80 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
81 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
82 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
83 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
86 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
87 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
88 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
89 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
90 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
99 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
100 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
104 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
107 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
108 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
109 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
110 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
111 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
112 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.11
Nodule 0
Rhizoplane 22.22
Rhizosphere 72.22
Stem 0
Stem Tuber 0
Unclassified 6.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213876_10049347 3300021384 Bacteria 2224
2 Ga0070682_100777118 3300005337 Bacteria 776
3 Ga0068868_100466512 3300005338 Bacteria 1101
4 Ga0070689_100333969 3300005340 Bacteria 1268
5 Ga0070675_100039129 3300005354 Bacteria 3868
6 Ga0070659_100443239 3300005366 Bacteria 1100
7 Ga0070713_100088445 3300005436 Bacteria 2659
8 Ga0070710_10346831 3300005437 Bacteria 982
9 Ga0070701_10213646 3300005438 Bacteria 1147
10 Ga0070705_100530738 3300005440 Bacteria 899
11 Ga0070694_100526638 3300005444 Bacteria 944
12 Ga0070708_100356286 3300005445 Bacteria 1379
13 Ga0070662_100319239 3300005457 Bacteria 1266
14 Ga0070681_10147809 3300005458 Bacteria 2278
15 Ga0070681_10527552 3300005458 Bacteria 1094
16 Ga0070706_100068514 3300005467 Bacteria 3281
17 Ga0070698_100009052 3300005471 Bacteria 10704
18 Ga0070684_100606281 3300005535 Unclassified 1018
19 Ga0070684_100900848 3300005535 Bacteria 829
20 Ga0070696_100034946 3300005546 Bacteria 3459
21 Ga0070704_100011310 3300005549 Bacteria 5468
22 Ga0070704_100644376 3300005549 Bacteria 935
23 Ga0070702_100059375 3300005615 Bacteria 2219
24 Ga0068858_100203432 3300005842 Unclassified 1873
25 Ga0068860_100423533 3300005843 Bacteria 1320
26 Ga0081455_10049496 3300005937 Bacteria 3622
27 Ga0070715_10297785 3300006163 Bacteria 862
28 Ga0075428_100163102 3300006844 Bacteria 2418
29 Ga0075428_100193512 3300006844 Bacteria 2199
30 Ga0075430_100109732 3300006846 Bacteria 2301
31 Ga0075430_100204245 3300006846 Bacteria 1640
32 Ga0075431_100453578 3300006847 Bacteria 1278
33 Ga0075431_100570302 3300006847 Bacteria 1118
34 Ga0075429_100340067 3300006880 Bacteria 1314
35 Ga0075429_100463399 3300006880 Bacteria 1110
36 Ga0105245_10240076 3300009098 Bacteria 1756
37 Ga0105245_10346474 3300009098 Bacteria 1471
38 Ga0114129_10312622 3300009147 Bacteria 2091
39 Ga0114129_10656719 3300009147 Bacteria 1353
40 Ga0114129_10783400 3300009147 Bacteria 1218
41 Ga0105243_10026447 3300009148 Bacteria 4441
42 Ga0105246_10117727 3300011119 Bacteria 1963
43 Ga0157370_10933558 3300013104 Bacteria 787
44 Ga0157374_10266466 3300013296 Bacteria 1688
45 Ga0163162_10375107 3300013306 Bacteria 1556
46 Ga0163162_11080063 3300013306 Bacteria 909
47 Ga0157376_10533250 3300014969 Bacteria 1159
48 Ga0163161_10175115 3300017792 Bacteria 1642
49 Ga0213876_10176235 3300021384 Bacteria 1137
50 Ga0213876_10185627 3300021384 Unclassified 1106
51 Ga0207692_10269119 3300025898 Bacteria 1027
52 Ga0207699_10053387 3300025906 Bacteria 2396
53 Ga0207684_10107006 3300025910 Bacteria 2392
54 Ga0207646_10171857 3300025922 Unclassified 1957
55 Ga0207646_10215654 3300025922 Bacteria 1733
56 Ga0207659_10129808 3300025926 Unclassified 1943
57 Ga0207690_10178368 3300025932 Bacteria 1597
58 Ga0207709_10048109 3300025935 Bacteria 2597
59 Ga0207641_10171488 3300026088 Bacteria 1981
60 Ga0207676_10132204 3300026095 Bacteria 2124
61 Ga0268266_10557031 3300028379 Bacteria 1099
62 Ga0268264_10314123 3300028381 Bacteria 1479
63 Ga0265338_10000830 3300028800 Bacteria 52102
64 Ga0265325_10000538 3300031241 Bacteria 27483
65 Ga0265325_10001860 3300031241 Bacteria 14575
66 Ga0265325_10028392 3300031241 Bacteria 3017
67 Ga0265339_10000350 3300031249 Bacteria 36667
68 Ga0265339_10025911 3300031249 Bacteria 3361
69 Ga0265339_10083952 3300031249 Bacteria 1679
70 Ga0265339_10208084 3300031249 Bacteria 962
71 Ga0265331_10261386 3300031250 Bacteria 776
72 Ga0265327_10004299 3300031251 Bacteria 12720
73 Ga0265327_10005963 3300031251 Bacteria 9928
74 Ga0265327_10130154 3300031251 Bacteria 1185
75 Ga0265316_10149943 3300031344 Bacteria 1747
76 Ga0265316_10254064 3300031344 Unclassified 1290
77 Ga0265313_10000142 3300031595 Bacteria 74294
78 Ga0265313_10001360 3300031595 Bacteria 23016
79 Ga0265314_10141217 3300031711 Bacteria 1489
80 Ga0307410_10028998 3300031852 Bacteria 3518
81 Ga0307407_10040684 3300031903 Bacteria 2594
82 Ga0307409_100051603 3300031995 Bacteria 3148
83 Ga0307416_100093108 3300032002 Bacteria 2595
84 Ga0307414_10103096 3300032004 Bacteria 2151
85 Ga0307415_100063757 3300032126 Bacteria 2562
86 Ga0307415_100147945 3300032126 Bacteria 1804
87 Ga0373945_0056757 3300035116 Bacteria 1453
88 Ga0373935_0395104 3300035692 Bacteria 992
89 Ga0373947_0032713 3300035725 Bacteria 3067
90 Ga0373937_0026737 3300036401 Bacteria 5215
91 Ga0436365_0989714 3300039437 Bacteria 2286
92 Ga0436365_1151278 3300039437 Bacteria 1807
93 Ga0436365_1327273 3300039437 Bacteria 3321
94 Ga0436365_1399514 3300039437 Bacteria 932
95 Ga0436365_1628512 3300039437 Bacteria 786
96 Ga0495629_0089858 3300046459 Bacteria 2143
97 Ga0495653_0156774 3300046463 Bacteria 1585
98 Ga0495618_0210590 3300046514 Bacteria 1229
99 Ga0495666_0057028 3300046526 Bacteria 1870
100 Ga0495586_0126308 3300046535 Bacteria 1431
101 Ga0495645_0134246 3300046543 Bacteria 1732
102 Ga0495645_0168517 3300046543 Bacteria 1509
103 Ga0495645_0357380 3300046543 Bacteria 940
104 Ga0495667_0087605 3300046559 Bacteria 2019
105 Ga0495635_0196807 3300046663 Bacteria 1368
106 Ga0495657_0205750 3300046675 Bacteria 1198
107 Ga0495657_0311267 3300046675 Bacteria 937
108 Ga0495581_0190769 3300047315 Bacteria 1199
109 Ga0495684_0036816 3300047471 Bacteria 3752
110 Ga0495614_0106901 3300048089 Bacteria 1227
111 Ga0496100_0028256 3300048903 Bacteria 3458
112 Ga0496101_0066521 3300048904 Bacteria 2629
113 Ga0496101_0243782 3300048904 Bacteria 1399
114 Ga0496102_0005154 3300048905 Bacteria 11086
115 Ga0496103_0277038 3300048906 Bacteria 1079
116 Ga0496104_0208773 3300048907 Bacteria 1865
117 Ga0496104_0225343 3300048907 Unclassified 1787
118 Ga0496104_0346010 3300048907 Bacteria 1399
119 Ga0496105_0049172 3300048908 Bacteria 3481
120 Ga0496105_0184219 3300048908 Bacteria 1709
121 Ga0496105_0404082 3300048908 Bacteria 1084
122 Ga0496107_0246672 3300048910 Bacteria 1329
123 Ga0496107_0369383 3300048910 Bacteria 1067
124 Ga0496108_0010817 3300048911 Bacteria 7410
125 Ga0496108_0076399 3300048911 Bacteria 2831
126 Ga0496108_0150157 3300048911 Bacteria 2010
127 Ga0496108_0326380 3300048911 Bacteria 1338
128 Ga0496109_0020223 3300048912 Bacteria 5880
129 Ga0496109_0054310 3300048912 Bacteria 3654
130 Ga0496109_0206814 3300048912 Unclassified 1845
131 Ga0496109_0451849 3300048912 Bacteria 1214
132 Ga0496109_0454902 3300048912 Bacteria 1209
133 Ga0496110_0007540 3300048913 Bacteria 8691
134 Ga0496110_0228253 3300048913 Bacteria 1693
135 Ga0496110_0338033 3300048913 Bacteria 1372
136 Ga0496110_0391218 3300048913 Bacteria 1267
137 Ga0496111_0113574 3300048914 Bacteria 1996
138 Ga0496112_0005370 3300048915 Bacteria 11071
139 Ga0496112_0008459 3300048915 Bacteria 9220
140 Ga0496112_0031997 3300048915 Bacteria 5107
141 Ga0496112_0040884 3300048915 Bacteria 4534
142 Ga0496112_0162411 3300048915 Bacteria 2200
143 Ga0496113_0028792 3300048916 Bacteria 4000
144 Ga0496113_0039831 3300048916 Bacteria 3460
145 Ga0496113_0391236 3300048916 Bacteria 1116
146 Ga0496114_0037386 3300048917 Bacteria 4015
147 Ga0496114_0089398 3300048917 Bacteria 2614
148 Ga0496114_0108905 3300048917 Bacteria 2372
149 Ga0496114_0471622 3300048917 Bacteria 1111
150 Ga0496115_0087207 3300048918 Bacteria 2547
151 Ga0501071_0104078 3300049587 Bacteria 2095
152 Ga0501072_0240373 3300049588 Bacteria 1442
153 Ga0501072_0731044 3300049588 Unclassified 777
154 Ga0501075_0106675 3300049591 Bacteria 2129
155 Ga0501076_0525355 3300049592 Bacteria 976
156 Ga0501076_0652933 3300049592 Bacteria 868
157 Ga0501079_0547248 3300049741 Bacteria 910
158 Ga0501081_0161025 3300049743 Bacteria 1617
159 Ga0501081_0355653 3300049743 Bacteria 1080
160 Ga0501081_0651699 3300049743 Bacteria 789
161 Ga0501081_0685315 3300049743 Unclassified 769
162 nmdc:mga05p37_252163_c1 3300050507 Bacteria 2116
163 nmdc:mga05p37_264404_c1 3300050507 Bacteria 2057
164 nmdc:mga09592_150729_c1 3300050508 Bacteria 2006
165 nmdc:mga09592_212045_c1 3300050508 Bacteria 1678
166 nmdc:mga0qj67_18149_c1 3300050509 Bacteria 5361
167 nmdc:mga0qj67_192326_c2 3300050509 Bacteria 1186
168 nmdc:mga06r32_11197_c1 3300050510 Bacteria 8081
169 nmdc:mga06r32_385652_c1 3300050510 Bacteria 1384
170 nmdc:mga06r32_994273_c1 3300050510 Unclassified 792
171 nmdc:mga08y16_790407_c1 3300050511 Unclassified 942
172 nmdc:mga0rr50_323528_c1 3300050513 Bacteria 1293
173 Ga0495619_0024497 3300053085 Bacteria 3871
174 Ga0495619_0123194 3300053085 Bacteria 1778
175 Ga0500566_0105294 3300053094 Bacteria 1541
176 Ga0500616_0006718 3300053153 Bacteria 7468
177 Ga0501084_0577290 3300054114 Bacteria 950
178 Ga0501082_0294150 3300060353 Bacteria 1414
179 Ga0530510_0002528 3300061734 Bacteria 12566
180 Ga0530510_0006801 3300061734 Bacteria 7967
181 Ga0213876_10049347
182 Ga0070682_100777118
183 Ga0068868_100466512
184 Ga0070689_100333969
185 Ga0070675_100039129
186 Ga0070659_100443239
187 Ga0070713_100088445
188 Ga0070710_10346831
189 Ga0070701_10213646
190 Ga0070705_100530738
191 Ga0070694_100526638
192 Ga0070708_100356286
193 Ga0070662_100319239
194 Ga0070681_10147809
195 Ga0070681_10527552
196 Ga0070706_100068514
197 Ga0070698_100009052
198 Ga0070684_100606281
199 Ga0070684_100900848
200 Ga0070696_100034946
201 Ga0070704_100011310
202 Ga0070704_100644376
203 Ga0070702_100059375
204 Ga0068858_100203432
205 Ga0068860_100423533
206 Ga0081455_10049496
207 Ga0070715_10297785
208 Ga0075428_100163102
209 Ga0075428_100193512
210 Ga0075430_100109732
211 Ga0075430_100204245
212 Ga0075431_100453578
213 Ga0075431_100570302
214 Ga0075429_100340067
215 Ga0075429_100463399
216 Ga0105245_10240076
217 Ga0105245_10346474
218 Ga0114129_10312622
219 Ga0114129_10656719
220 Ga0114129_10783400
221 Ga0105243_10026447
222 Ga0105246_10117727
223 Ga0157370_10933558
224 Ga0157374_10266466
225 Ga0163162_10375107
226 Ga0163162_11080063
227 Ga0157376_10533250
228 Ga0163161_10175115
229 Ga0213876_10176235
230 Ga0213876_10185627
231 Ga0207692_10269119
232 Ga0207699_10053387
233 Ga0207684_10107006
234 Ga0207646_10171857
235 Ga0207646_10215654
236 Ga0207659_10129808
237 Ga0207690_10178368
238 Ga0207709_10048109
239 Ga0207641_10171488
240 Ga0207676_10132204
241 Ga0268266_10557031
242 Ga0268264_10314123
243 Ga0265338_10000830
244 Ga0265325_10000538
245 Ga0265325_10001860
246 Ga0265325_10028392
247 Ga0265339_10000350
248 Ga0265339_10025911
249 Ga0265339_10083952
250 Ga0265339_10208084
251 Ga0265331_10261386
252 Ga0265327_10004299
253 Ga0265327_10005963
254 Ga0265327_10130154
255 Ga0265316_10149943
256 Ga0265316_10254064
257 Ga0265313_10000142
258 Ga0265313_10001360
259 Ga0265314_10141217
260 Ga0307410_10028998
261 Ga0307407_10040684
262 Ga0307409_100051603
263 Ga0307416_100093108
264 Ga0307414_10103096
265 Ga0307415_100063757
266 Ga0307415_100147945
267 Ga0373945_0056757
268 Ga0373935_0395104
269 Ga0373947_0032713
270 Ga0373937_0026737
271 Ga0436365_0989714
272 Ga0436365_1151278
273 Ga0436365_1327273
274 Ga0436365_1399514
275 Ga0436365_1628512
276 Ga0495629_0089858
277 Ga0495653_0156774
278 Ga0495618_0210590
279 Ga0495666_0057028
280 Ga0495586_0126308
281 Ga0495645_0134246
282 Ga0495645_0168517
283 Ga0495645_0357380
284 Ga0495667_0087605
285 Ga0495635_0196807
286 Ga0495657_0205750
287 Ga0495657_0311267
288 Ga0495581_0190769
289 Ga0495684_0036816
290 Ga0495614_0106901
291 Ga0496100_0028256
292 Ga0496101_0066521
293 Ga0496101_0243782
294 Ga0496102_0005154
295 Ga0496103_0277038
296 Ga0496104_0208773
297 Ga0496104_0225343
298 Ga0496104_0346010
299 Ga0496105_0049172
300 Ga0496105_0184219
301 Ga0496105_0404082
302 Ga0496107_0246672
303 Ga0496107_0369383
304 Ga0496108_0010817
305 Ga0496108_0076399
306 Ga0496108_0150157
307 Ga0496108_0326380
308 Ga0496109_0020223
309 Ga0496109_0054310
310 Ga0496109_0206814
311 Ga0496109_0451849
312 Ga0496109_0454902
313 Ga0496110_0007540
314 Ga0496110_0228253
315 Ga0496110_0338033
316 Ga0496110_0391218
317 Ga0496111_0113574
318 Ga0496112_0005370
319 Ga0496112_0008459
320 Ga0496112_0031997
321 Ga0496112_0040884
322 Ga0496112_0162411
323 Ga0496113_0028792
324 Ga0496113_0039831
325 Ga0496113_0391236
326 Ga0496114_0037386
327 Ga0496114_0089398
328 Ga0496114_0108905
329 Ga0496114_0471622
330 Ga0496115_0087207
331 Ga0501071_0104078
332 Ga0501072_0240373
333 Ga0501072_0731044
334 Ga0501075_0106675
335 Ga0501076_0525355
336 Ga0501076_0652933
337 Ga0501079_0547248
338 Ga0501081_0161025
339 Ga0501081_0355653
340 Ga0501081_0651699
341 Ga0501081_0685315
342 nmdc:mga05p37_252163_c1
343 nmdc:mga05p37_264404_c1
344 nmdc:mga09592_150729_c1
345 nmdc:mga09592_212045_c1
346 nmdc:mga0qj67_18149_c1
347 nmdc:mga0qj67_192326_c2
348 nmdc:mga06r32_11197_c1
349 nmdc:mga06r32_385652_c1
350 nmdc:mga06r32_994273_c1
351 nmdc:mga08y16_790407_c1
352 nmdc:mga0rr50_323528_c1
353 Ga0495619_0024497
354 Ga0495619_0123194
355 Ga0500566_0105294
356 Ga0500616_0006718
357 Ga0501084_0577290
358 Ga0501082_0294150
359 Ga0530510_0002528
360 Ga0530510_0006801

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

38

84

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5wm9-assembly2.cif.gz_C crystal structure of tetr family regulator rv0078 from mycobacterium tuberculosis 0.804 28 225
3br3-assembly1.cif.gz_A crystal structure of the complex of ethidium bound to qacr(e90q), a mutant of a multidrug binding transcriptional repressor 0.7949 35 223
3btc-assembly1.cif.gz_A crystal structure of qacr(e57q) bound to malachite green 0.7928 34 225
3on2-assembly1.cif.gz_A structure of a protein with unknown function from rhodococcus sp. rha1 0.7885 34 223
3br0-assembly1.cif.gz_A crystal structure of the complex of malachite green bound to qacr(e120q), a mutant of a multidrug binding transcriptional repressor 0.786 34 223
ID Description Score Start End Superfamily
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8965 34 80 1.10.10.60
2fq4A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8856 33 76 1.10.10.60
6azhA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8786 35 80 1.10.10.60
1jtyA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8757 34 80 1.10.10.60
3btjA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8752 34 80 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A7C2NTU5-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9408 1 225 GO:0000976
GO:0003700
AF-A0A7C2NTU5-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9366 1 225 GO:0000976
GO:0003700
AF-A0A7C2JD05-F1-model_v4 deleted 0.927 54 225
AF-A0A7C2JD05-F1-model_v4 deleted 0.9219 54 225
AF-A0A538LRQ0-F1-model_v4 TetR/AcrR family transcriptional regulator 0.901 1 225 GO:0000976
GO:0003700

Map