F275492

General Info

Members Datasets Scaffolds Average Seq Length
180 130 360 353

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10007788|Ga0105245_100077886
Length 395
Sequence MREDALVERKNESWRNVAKLALTNRIQRFMASRRPRLRKRAQSLLTNSDIAELLAIASESAKQPLQKALRRASRKAFLWPEEAAQMIQQDRSLEELPGVGPSLHRIIGRWIQDPPDVPKPPEIRAGFFTAVRAAEILADNPSWLRNVKGDLQMHTLWSDGTASIEEMAQAAVARGHEYIAITDHAKGLKIAGGIDESQLATQAEEIAQVNAAMASTAKPFRVLRSIELNLSPSGAGDMEPSALARLDLVLGCFHSALRKKEDQTERYLAALRNPDLQILGHPRGRIYNFRLGLFADWRRVFDLAAELDKAVEIDSYPDRQDLSGDLVRLAAKAGCRISIGTDSHGPSQLRFMEFGLASALLAGVKRDRILNFMTAEELLNWVGSVRKRSARKSVA

Samples

Sample ID Description Type Environment
1 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
55 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
78 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
79 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
80 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
81 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
82 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
90 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
91 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
102 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
105 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
129 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.44
Metatranscriptomes 0.56
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 11.11
Rhizosphere 86.67
Stem 0
Stem Tuber 0
Unclassified 19.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105245_10007788 3300009098 Bacteria 9387
2 rootH2_10014591 3300003320 Bacteria 5146
3 rootL2_10259332 3300003322 Bacteria 1147
4 Ga0065712_10002714 3300005290 Bacteria 7026
5 Ga0065715_10005568 3300005293 Bacteria 3129
6 Ga0065715_10036706 3300005293 Unclassified 1228
7 Ga0065715_10110426 3300005293 Unclassified 2617
8 Ga0070683_100025160 3300005329 Bacteria 5342
9 Ga0070683_100136552 3300005329 Bacteria 2322
10 Ga0070683_100353144 3300005329 Bacteria 1400
11 Ga0070670_100220424 3300005331 Bacteria 1650
12 Ga0070680_100069344 3300005336 Unclassified 2895
13 Ga0070682_100204227 3300005337 Bacteria 1396
14 Ga0068868_100020938 3300005338 Unclassified 4923
15 Ga0070671_100008995 3300005355 Bacteria 8015
16 Ga0070671_100403782 3300005355 Unclassified 1169
17 Ga0070688_100004564 3300005365 Bacteria 7223
18 Ga0070688_100232467 3300005365 Unclassified 1305
19 Ga0070714_100000023 3300005435 Bacteria 155379
20 Ga0070714_100223979 3300005435 Bacteria 1730
21 Ga0070713_100039340 3300005436 Bacteria 3837
22 Ga0070681_10198035 3300005458 Unclassified 1927
23 Ga0070681_10228679 3300005458 Bacteria 1774
24 Ga0070706_100215571 3300005467 Unclassified 1792
25 Ga0070707_100200823 3300005468 Bacteria 1943
26 Ga0070698_100003502 3300005471 Bacteria 17267
27 Ga0070699_100011425 3300005518 Bacteria 7667
28 Ga0070679_100248673 3300005530 Bacteria 1734
29 Ga0070679_100255521 3300005530 Bacteria 1708
30 Ga0070684_100008160 3300005535 Bacteria 8176
31 Ga0070684_100118978 3300005535 Archaea 2375
32 Ga0068853_100159842 3300005539 Unclassified 2032
33 Ga0070693_100081577 3300005547 Unclassified 1929
34 Ga0070665_100097050 3300005548 Unclassified 2952
35 Ga0068854_100159204 3300005578 Unclassified 1747
36 Ga0068856_100318063 3300005614 Bacteria 1574
37 Ga0068852_100003592 3300005616 Bacteria 10856
38 Ga0068852_100268537 3300005616 Bacteria 1641
39 Ga0081455_10003975 3300005937 Bacteria 16770
40 Ga0081455_10004372 3300005937 Bacteria 15913
41 Ga0081455_10005385 3300005937 Bacteria 14048
42 Ga0081455_10008149 3300005937 Bacteria 10930
43 Ga0081455_10293810 3300005937 Unclassified 1169
44 Ga0081539_10005204 3300005985 Bacteria 13486
45 Ga0070717_10000960 3300006028 Bacteria 19222
46 Ga0070715_10083055 3300006163 Bacteria 1458
47 Ga0070712_100048907 3300006175 Unclassified 2934
48 Ga0097621_100042994 3300006237 Bacteria 3641
49 Ga0097621_100048629 3300006237 Bacteria 3442
50 Ga0075428_100036994 3300006844 Bacteria 5375
51 Ga0075428_100504083 3300006844 Unclassified 1295
52 Ga0075429_100067845 3300006880 Unclassified 3105
53 Ga0105240_10020848 3300009093 Bacteria 8730
54 Ga0105240_10023959 3300009093 Bacteria 8063
55 Ga0105240_10035137 3300009093 Bacteria 6462
56 Ga0105240_10278123 3300009093 Bacteria 1924
57 Ga0105240_10611145 3300009093 Unclassified 1199
58 Ga0111539_10125645 3300009094 Unclassified 3006
59 Ga0105245_10135894 3300009098 Bacteria 2310
60 Ga0105247_10037289 3300009101 Bacteria 2966
61 Ga0114129_10073113 3300009147 Bacteria 4777
62 Ga0114129_10204198 3300009147 Bacteria 2675
63 Ga0105241_10046746 3300009174 Unclassified 3288
64 Ga0105237_10353624 3300009545 Bacteria 1474
65 Ga0105238_10019658 3300009551 Bacteria 6878
66 Ga0105238_10200399 3300009551 Unclassified 1971
67 Ga0105239_10084808 3300010375 Bacteria 3490
68 Ga0105239_10120496 3300010375 Viruses 2913
69 Ga0157371_10048888 3300013102 Bacteria 3006
70 Ga0157369_10000442 3300013105 Bacteria 55048
71 Ga0157369_10309825 3300013105 Bacteria 1642
72 Ga0157374_10006451 3300013296 Bacteria 9960
73 Ga0157374_10020790 3300013296 Bacteria 5828
74 Ga0157378_10042569 3300013297 Bacteria 4031
75 Ga0163162_10155882 3300013306 Bacteria 2404
76 Ga0157372_10042367 3300013307 Bacteria 5035
77 Ga0157375_10144297 3300013308 Bacteria 2510
78 Ga0157375_10305822 3300013308 Unclassified 1754
79 Ga0163163_10000620 3300014325 Bacteria 30671
80 Ga0163163_10017370 3300014325 Bacteria 6709
81 Ga0157376_10008299 3300014969 Bacteria 7487
82 Ga0157376_10043282 3300014969 Bacteria 3695
83 Ga0157376_10117763 3300014969 Bacteria 2349
84 Ga0207666_1000060 3300025271 Bacteria 19738
85 Ga0207673_1000522 3300025290 Bacteria 4077
86 Ga0207697_10002858 3300025315 Bacteria 8753
87 Ga0207707_10195818 3300025912 Viruses 1763
88 Ga0207695_10244684 3300025913 Unclassified 1694
89 Ga0207693_10141637 3300025915 Bacteria 1891
90 Ga0207694_10077549 3300025924 Unclassified 2604
91 Ga0207694_10101366 3300025924 Bacteria 2281
92 Ga0207650_10180544 3300025925 Bacteria 1682
93 Ga0207659_10109779 3300025926 Bacteria 2095
94 Ga0207687_10004387 3300025927 Bacteria 9415
95 Ga0207700_10017056 3300025928 Bacteria 4839
96 Ga0207664_10000061 3300025929 Bacteria 116230
97 Ga0207644_10124645 3300025931 Unclassified 1965
98 Ga0207706_10043715 3300025933 Bacteria 3970
99 Ga0207667_10036559 3300025949 Bacteria 5262
100 Ga0207640_10116525 3300025981 Unclassified 1905
101 Ga0207677_10056445 3300026023 Bacteria 2691
102 Ga0207677_10234222 3300026023 Unclassified 1481
103 Ga0207678_10001902 3300026067 Bacteria 19059
104 Ga0207702_10066824 3300026078 Bacteria 3083
105 Ga0207702_10153179 3300026078 Bacteria 2099
106 Ga0207641_10259723 3300026088 Unclassified 1626
107 Ga0207683_10121104 3300026121 Bacteria 2349
108 Ga0268266_10010852 3300028379 Bacteria 7934
109 Ga0265760_10000496 3300031090 Bacteria 11048
110 Ga0307408_100333348 3300031548 Unclassified 1282
111 Ga0373944_0031236 3300035089 Bacteria 1601
112 Ga0373936_0008994 3300035113 Unclassified 3767
113 Ga0373945_0093862 3300035116 Bacteria 1165
114 Ga0373943_0070617 3300035170 Bacteria 1767
115 Ga0373946_0048667 3300035171 Bacteria 1765
116 Ga0373924_0000107 3300035410 Bacteria 23560
117 Ga0373927_0045059 3300035695 Bacteria 2854
118 Ga0373947_0038047 3300035725 Bacteria 2856
119 Ga0373937_0000065 3300036401 Bacteria 95014
120 Ga0373925_0128548 3300037068 Bacteria 1973
121 Ga0373925_0273358 3300037068 Bacteria 1359
122 Ga0395899_0003467 3300037312 Bacteria 12494
123 Ga0395901_0176698 3300038443 Bacteria 2239
124 Ga0436361_0725526 3300039447 Unclassified 2338
125 Ga0436363_0198473 3300039450 Unclassified 2893
126 Ga0451839_0634464 3300041496 Unclassified 1336
127 Ga0451577_0021583 3300042876 Bacteria 5891
128 Ga0466957_0007975 3300044842 Bacteria 6008
129 Ga0451576_0057592 3300045051 Bacteria 4062
130 Ga0466967_0138812 3300045976 Bacteria 2262
131 Ga0495603_0211896 3300046455 Bacteria 1119
132 Ga0495629_0000374 3300046459 Bacteria 37662
133 Ga0495651_0093450 3300046462 Bacteria 2252
134 Ga0495580_0001350 3300046472 Bacteria 21601
135 Ga0495580_0194522 3300046472 Bacteria 1398
136 Ga0495582_0024780 3300046473 Bacteria 3284
137 Ga0495582_0148522 3300046473 Bacteria 1330
138 Ga0495639_0011254 3300046475 Bacteria 3854
139 Ga0495594_0103087 3300046499 Bacteria 1606
140 Ga0495630_0067625 3300046517 Bacteria 2686
141 Ga0495665_0039373 3300046531 Bacteria 2518
142 Ga0495667_0088616 3300046559 Bacteria 2006
143 Ga0495634_0066440 3300046642 Bacteria 2388
144 Ga0495635_0032537 3300046663 Unclassified 3618
145 Ga0495658_0002241 3300046683 Bacteria 9781
146 Ga0495613_0035010 3300046689 Bacteria 3728
147 Ga0495613_0088639 3300046689 Bacteria 2242
148 Ga0495581_0005289 3300047315 Bacteria 7468
149 Ga0495674_0267703 3300047319 Bacteria 1403
150 Ga0495676_0131015 3300047321 Bacteria 1810
151 Ga0495684_0068702 3300047471 Bacteria 2694
152 Ga0496100_0044724 3300048903 Bacteria 2838
153 Ga0496100_0139095 3300048903 Bacteria 1718
154 Ga0496102_0048100 3300048905 Bacteria 3878
155 Ga0496104_0133514 3300048907 Bacteria 2384
156 Ga0496105_0004579 3300048908 Bacteria 10420
157 Ga0496105_0031291 3300048908 Bacteria 4363
158 Ga0496105_0105798 3300048908 Bacteria 2323
159 Ga0496109_0022047 3300048912 Bacteria 5638
160 Ga0496109_0155325 3300048912 Bacteria 2143
161 Ga0496110_0031505 3300048913 Bacteria 4576
162 Ga0496112_0008294 3300048915 Bacteria 9298
163 Ga0496112_0133505 3300048915 Bacteria 2453
164 Ga0496112_0153344 3300048915 Bacteria 2271
165 Ga0496112_0170417 3300048915 Bacteria 2142
166 Ga0496112_0222136 3300048915 Bacteria 1845
167 Ga0496112_0480026 3300048915 Unclassified 1180
168 Ga0496114_0211647 3300048917 Bacteria 1700
169 Ga0496114_0274272 3300048917 Unclassified 1486
170 Ga0496115_0003867 3300048918 Bacteria 10796
171 Ga0496115_0014594 3300048918 Bacteria 5948
172 Ga0501038_0343911 3300049574 Bacteria 1163
173 Ga0501040_0010787 3300049576 Bacteria 5972
174 Ga0501075_0086568 3300049591 Bacteria 2374
175 Ga0501076_0313392 3300049592 Bacteria 1287
176 nmdc:mga05p37_260402_c1 3300050507 Bacteria 2076
177 nmdc:mga05p37_799834_c1 3300050507 Bacteria 1032
178 nmdc:mga0n895_573207_c1 3300050512 Bacteria 1133
179 Ga0501084_0166012 3300054114 Bacteria 1863
180 Ga0501082_0156773 3300060353 Bacteria 1978
181 Ga0105245_10007788
182 rootH2_10014591
183 rootL2_10259332
184 Ga0065712_10002714
185 Ga0065715_10005568
186 Ga0065715_10036706
187 Ga0065715_10110426
188 Ga0070683_100025160
189 Ga0070683_100136552
190 Ga0070683_100353144
191 Ga0070670_100220424
192 Ga0070680_100069344
193 Ga0070682_100204227
194 Ga0068868_100020938
195 Ga0070671_100008995
196 Ga0070671_100403782
197 Ga0070688_100004564
198 Ga0070688_100232467
199 Ga0070714_100000023
200 Ga0070714_100223979
201 Ga0070713_100039340
202 Ga0070681_10198035
203 Ga0070681_10228679
204 Ga0070706_100215571
205 Ga0070707_100200823
206 Ga0070698_100003502
207 Ga0070699_100011425
208 Ga0070679_100248673
209 Ga0070679_100255521
210 Ga0070684_100008160
211 Ga0070684_100118978
212 Ga0068853_100159842
213 Ga0070693_100081577
214 Ga0070665_100097050
215 Ga0068854_100159204
216 Ga0068856_100318063
217 Ga0068852_100003592
218 Ga0068852_100268537
219 Ga0081455_10003975
220 Ga0081455_10004372
221 Ga0081455_10005385
222 Ga0081455_10008149
223 Ga0081455_10293810
224 Ga0081539_10005204
225 Ga0070717_10000960
226 Ga0070715_10083055
227 Ga0070712_100048907
228 Ga0097621_100042994
229 Ga0097621_100048629
230 Ga0075428_100036994
231 Ga0075428_100504083
232 Ga0075429_100067845
233 Ga0105240_10020848
234 Ga0105240_10023959
235 Ga0105240_10035137
236 Ga0105240_10278123
237 Ga0105240_10611145
238 Ga0111539_10125645
239 Ga0105245_10135894
240 Ga0105247_10037289
241 Ga0114129_10073113
242 Ga0114129_10204198
243 Ga0105241_10046746
244 Ga0105237_10353624
245 Ga0105238_10019658
246 Ga0105238_10200399
247 Ga0105239_10084808
248 Ga0105239_10120496
249 Ga0157371_10048888
250 Ga0157369_10000442
251 Ga0157369_10309825
252 Ga0157374_10006451
253 Ga0157374_10020790
254 Ga0157378_10042569
255 Ga0163162_10155882
256 Ga0157372_10042367
257 Ga0157375_10144297
258 Ga0157375_10305822
259 Ga0163163_10000620
260 Ga0163163_10017370
261 Ga0157376_10008299
262 Ga0157376_10043282
263 Ga0157376_10117763
264 Ga0207666_1000060
265 Ga0207673_1000522
266 Ga0207697_10002858
267 Ga0207707_10195818
268 Ga0207695_10244684
269 Ga0207693_10141637
270 Ga0207694_10077549
271 Ga0207694_10101366
272 Ga0207650_10180544
273 Ga0207659_10109779
274 Ga0207687_10004387
275 Ga0207700_10017056
276 Ga0207664_10000061
277 Ga0207644_10124645
278 Ga0207706_10043715
279 Ga0207667_10036559
280 Ga0207640_10116525
281 Ga0207677_10056445
282 Ga0207677_10234222
283 Ga0207678_10001902
284 Ga0207702_10066824
285 Ga0207702_10153179
286 Ga0207641_10259723
287 Ga0207683_10121104
288 Ga0268266_10010852
289 Ga0265760_10000496
290 Ga0307408_100333348
291 Ga0373944_0031236
292 Ga0373936_0008994
293 Ga0373945_0093862
294 Ga0373943_0070617
295 Ga0373946_0048667
296 Ga0373924_0000107
297 Ga0373927_0045059
298 Ga0373947_0038047
299 Ga0373937_0000065
300 Ga0373925_0128548
301 Ga0373925_0273358
302 Ga0395899_0003467
303 Ga0395901_0176698
304 Ga0436361_0725526
305 Ga0436363_0198473
306 Ga0451839_0634464
307 Ga0451577_0021583
308 Ga0466957_0007975
309 Ga0451576_0057592
310 Ga0466967_0138812
311 Ga0495603_0211896
312 Ga0495629_0000374
313 Ga0495651_0093450
314 Ga0495580_0001350
315 Ga0495580_0194522
316 Ga0495582_0024780
317 Ga0495582_0148522
318 Ga0495639_0011254
319 Ga0495594_0103087
320 Ga0495630_0067625
321 Ga0495665_0039373
322 Ga0495667_0088616
323 Ga0495634_0066440
324 Ga0495635_0032537
325 Ga0495658_0002241
326 Ga0495613_0035010
327 Ga0495613_0088639
328 Ga0495581_0005289
329 Ga0495674_0267703
330 Ga0495676_0131015
331 Ga0495684_0068702
332 Ga0496100_0044724
333 Ga0496100_0139095
334 Ga0496102_0048100
335 Ga0496104_0133514
336 Ga0496105_0004579
337 Ga0496105_0031291
338 Ga0496105_0105798
339 Ga0496109_0022047
340 Ga0496109_0155325
341 Ga0496110_0031505
342 Ga0496112_0008294
343 Ga0496112_0133505
344 Ga0496112_0153344
345 Ga0496112_0170417
346 Ga0496112_0222136
347 Ga0496112_0480026
348 Ga0496114_0211647
349 Ga0496114_0274272
350 Ga0496115_0003867
351 Ga0496115_0014594
352 Ga0501038_0343911
353 Ga0501040_0010787
354 Ga0501075_0086568
355 Ga0501076_0313392
356 nmdc:mga05p37_260402_c1
357 nmdc:mga05p37_799834_c1
358 nmdc:mga0n895_573207_c1
359 Ga0501084_0166012
360 Ga0501082_0156773

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02811

PHP

PHP domain

150

341

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
3au6-assembly1.cif.gz_A dna polymerase x from thermus thermophilus hb8 ternary complex with primer/template dna and ddgtp 0.9412 102 338
3au2-assembly1.cif.gz_A dna polymerase x from thermus thermophilus hb8 complexed with ca-dgtp 0.9303 102 338
3b0y-assembly1.cif.gz_A k263d mutant of polx from thermus thermophilus hb8 complexed with ca-dgtp 0.9303 102 338
3b0x-assembly1.cif.gz_A k263a mutant of polx from thermus thermophilus hb8 complexed with ca-dgtp 0.9301 102 338
1m65-assembly1.cif.gz_A ycdx protein 0.8482 106 340
ID Description Score Start End Superfamily
af_P96221_92_335_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9611 101 338 3.20.20.140
3au6A05 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9412 102 338 3.20.20.140
2w9mA05 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9411 101 341 3.20.20.140
af_P96221_92_335_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9342 101 338 3.20.20.140
af_Q2FZD4_322_570_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9183 102 342 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A2V6LHA1-F1-model_v4 Polymerase/histidinol phosphatase N-terminal domain-containing protein 0.985 124 341 GO:0005829
GO:0008270
GO:0042578
AF-A0A2V6K4F0-F1-model_v4 Polymerase/histidinol phosphatase N-terminal domain-containing protein 0.9835 228 341 GO:0005829
GO:0008270
GO:0042578
AF-A0A2V6GF38-F1-model_v4 Polymerase/histidinol phosphatase N-terminal domain-containing protein 0.9832 3 341 GO:0005829
GO:0008270
GO:0042578
AF-A0A2V7WXA2-F1-model_v4 DNA polymerase III 0.9827 84 341 GO:0005829
GO:0008270
GO:0042578
AF-A0A2V5REG1-F1-model_v4 Polymerase/histidinol phosphatase N-terminal domain-containing protein 0.9808 8 341 GO:0005829
GO:0008270
GO:0042578

Map