F274710

General Info

Members Datasets Scaffolds Average Seq Length
179 125 358 366

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2917554339|2917557285
Length 418
Sequence VLITAGGTGGHLFPAESLAHELTRRGIPVHLATDHRVASYGQDFPAEAVHLIASATFGDRSPLGLAKSGLKIVRGGVQSFGLVNRIRPRAAIGFGGYPTLPPMLAAVARRVPTLIHEANAVAGRANRFLAPKVTAVATTFETTGLLGEAAAKAVVTGNPVRPRVIDAAAPYATPSPDGPFELVVFGGSQGARVFSDLVPPALAELPGHLRTRIRLVQQARPEDVTRVEVLLNGLGVTAEIAPFFTDLPARIARAHLVIGRSGASTVSELAIIGRPSVLVPLPHALDNDQKTNALELERVGGAVMAEQASLTPQTLAALLSDLMQAPDRLAGMAEKAKAMGRPDAVARLADLVEHVASGGKPADFKSGEAPKGLNTGEAPTEAKTGEAPTEAKTGEAPTGRGASPSTETGVSPADQTRT

Samples

Sample ID Description Type Environment
1 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
27 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
28 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
29 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
30 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
31 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
32 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
33 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
44 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
45 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
46 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
47 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
56 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
57 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
58 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
59 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
65 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
66 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
67 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
70 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
71 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
72 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
73 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
74 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
75 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
83 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
84 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
85 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
86 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
89 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
95 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
96 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
97 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
98 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
99 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
100 2508501050 Microvirga lupini Lut6 Isolate Nodule
101 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
102 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
103 2643221733 Bosea sp. Root381 Isolate Unclassified
104 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
105 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
106 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
107 2773857925 Microvirga vignae BR3299 Isolate Unclassified
108 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
109 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
110 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
111 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
112 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
113 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
114 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
115 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
116 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
117 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
118 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
119 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
120 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
121 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
122 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
123 8002060224 Methylocystis sp. Sn-Cys Isolate Unclassified
124 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
125 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.92
Metatranscriptomes 0
Isolates 15.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.79
Nodule 2.79
Rhizoplane 3.35
Rhizosphere 77.09
Stem 0
Stem Tuber 0.56
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10012072 3300003215 Bacteria 3766
2 Ga0070683_100131255 3300005329 Bacteria 2371
3 Ga0070680_100039056 3300005336 Bacteria 3840
4 Ga0070682_100005762 3300005337 Bacteria 6911
5 Ga0070660_100005903 3300005339 Bacteria 8469
6 Ga0070674_100146071 3300005356 Bacteria 1780
7 Ga0070663_100001086 3300005455 Bacteria 14903
8 Ga0070681_10000939 3300005458 Bacteria 24555
9 Ga0070679_100035956 3300005530 Bacteria 4915
10 Ga0070684_100115142 3300005535 Bacteria 2414
11 Ga0068853_100012916 3300005539 Bacteria 6806
12 Ga0070695_100032539 3300005545 Bacteria 3260
13 Ga0070696_100070323 3300005546 Bacteria 2462
14 Ga0070693_100084834 3300005547 Bacteria 1897
15 Ga0070664_100049843 3300005564 Bacteria 3542
16 Ga0068856_100170190 3300005614 Bacteria 2190
17 Ga0068861_100230375 3300005719 Bacteria 1571
18 Ga0068860_100132795 3300005843 Bacteria 2390
19 Ga0070712_100115359 3300006175 Bacteria 2012
20 Ga0068871_100307311 3300006358 Bacteria 1393
21 Ga0075428_100007093 3300006844 Bacteria 12407
22 Ga0105241_10013897 3300009174 Bacteria 5898
23 Ga0105237_10006667 3300009545 Bacteria 12761
24 Ga0105239_10567005 3300010375 Bacteria 1294
25 Ga0157369_10159644 3300013105 Bacteria 2380
26 Ga0157372_10038744 3300013307 Bacteria 5260
27 Ga0157380_10122633 3300014326 Bacteria 2204
28 Ga0213873_10003991 3300021358 Bacteria 2710
29 Ga0213876_10001035 3300021384 Bacteria 17965
30 Ga0213876_10001072 3300021384 Bacteria 17580
31 Ga0213875_10002982 3300021388 Bacteria 9856
32 Ga0213871_10010139 3300021441 Bacteria 2130
33 Ga0209758_1000186 3300025297 Bacteria 138804
34 Ga0207654_10015914 3300025911 Bacteria 3911
35 Ga0207693_10128395 3300025915 Bacteria 1993
36 Ga0207657_10030121 3300025919 Bacteria 4930
37 Ga0207652_10019094 3300025921 Bacteria 5632
38 Ga0207669_10151775 3300025937 Bacteria 1624
39 Ga0207661_10070601 3300025944 Bacteria 2852
40 Ga0207639_10027448 3300026041 Bacteria 4149
41 Ga0207678_10000635 3300026067 Bacteria 32236
42 Ga0207708_10220632 3300026075 Bacteria 1519
43 Ga0207675_100226813 3300026118 Bacteria 1801
44 Ga0265328_10005958 3300031239 Bacteria 5190
45 Ga0265325_10073632 3300031241 Bacteria 1710
46 Ga0265340_10001499 3300031247 Bacteria 13374
47 Ga0265340_10018971 3300031247 Bacteria 3543
48 Ga0265339_10007439 3300031249 Bacteria 7078
49 Ga0265339_10088216 3300031249 Bacteria 1630
50 Ga0265331_10000707 3300031250 Bacteria 28439
51 Ga0265331_10064151 3300031250 Bacteria 1729
52 Ga0265316_10013496 3300031344 Bacteria 7251
53 Ga0265316_10015587 3300031344 Bacteria 6636
54 Ga0265316_10070462 3300031344 Bacteria 2697
55 Ga0307408_100032202 3300031548 Bacteria 3655
56 Ga0265313_10011754 3300031595 Bacteria 5415
57 Ga0265313_10052762 3300031595 Bacteria 1939
58 Ga0265313_10054399 3300031595 Bacteria 1901
59 Ga0265314_10003005 3300031711 Bacteria 16674
60 Ga0265314_10033693 3300031711 Bacteria 3751
61 Ga0265342_10009082 3300031712 Bacteria 7049
62 Ga0265342_10014665 3300031712 Bacteria 5194
63 Ga0316576_10032016 3300031727 Bacteria 3736
64 Ga0307409_100025991 3300031995 Bacteria 4120
65 Ga0373936_0070204 3300035113 Bacteria 1443
66 Ga0373945_0052466 3300035116 Bacteria 1502
67 Ga0373943_0003058 3300035170 Bacteria 7598
68 Ga0373935_0031751 3300035692 Bacteria 3279
69 Ga0373947_0005812 3300035725 Bacteria 7193
70 Ga0373925_0002418 3300037068 Bacteria 14974
71 Ga0395905_0126507 3300037471 Bacteria 2403
72 Ga0436364_0079232 3300037853 Bacteria 5899
73 Ga0436364_1068422 3300037853 Bacteria 1484
74 Ga0436365_0141715 3300039437 Bacteria 19847
75 Ga0436365_0247802 3300039437 Bacteria 15036
76 Ga0436365_1712708 3300039437 Bacteria 68148
77 Ga0436360_0773738 3300039438 Bacteria 3149
78 Ga0436361_0946762 3300039447 Bacteria 3270
79 Ga0436363_0405250 3300039450 Bacteria 18420
80 Ga0436363_0457214 3300039450 Bacteria 1643
81 Ga0436363_0602817 3300039450 Bacteria 3182
82 Ga0436363_1260891 3300039450 Bacteria 1867
83 Ga0436362_1096230 3300039453 Bacteria 18621
84 Ga0451576_0001174 3300045051 Bacteria 46946
85 Ga0496100_0054809 3300048903 Bacteria 2602
86 Ga0496103_0040912 3300048906 Bacteria 2848
87 Ga0496104_0114392 3300048907 Bacteria 2587
88 Ga0496106_0038971 3300048909 Bacteria 3558
89 Ga0496107_0014980 3300048910 Bacteria 5430
90 Ga0496115_0006428 3300048918 Bacteria 8611
91 Ga0501031_0120730 3300049568 Bacteria 1712
92 Ga0501032_0005003 3300049569 Bacteria 9911
93 Ga0501034_0000068 3300049571 Bacteria 182904
94 Ga0501034_0000469 3300049571 Bacteria 66571
95 Ga0501034_0081817 3300049571 Bacteria 3231
96 Ga0501034_0111287 3300049571 Bacteria 2729
97 Ga0501034_0184307 3300049571 Bacteria 2051
98 Ga0501034_0209425 3300049571 Bacteria 1905
99 Ga0501039_0000138 3300049575 Bacteria 49539
100 Ga0501043_0141372 3300049579 Bacteria 1885
101 Ga0501046_0001138 3300049580 Bacteria 25939
102 Ga0501047_0000873 3300049581 Bacteria 30764
103 Ga0501047_0012864 3300049581 Bacteria 7930
104 Ga0501047_0151314 3300049581 Bacteria 2196
105 Ga0501047_0180015 3300049581 Bacteria 1980
106 Ga0501067_0000203 3300049583 Bacteria 33425
107 Ga0501067_0000581 3300049583 Bacteria 19821
108 Ga0501067_0002784 3300049583 Bacteria 9618
109 Ga0501067_0037206 3300049583 Bacteria 2703
110 Ga0501067_0054739 3300049583 Bacteria 2211
111 Ga0501067_0065796 3300049583 Bacteria 2007
112 Ga0501069_0015267 3300049585 Bacteria 4116
113 Ga0501070_0025582 3300049586 Bacteria 4951
114 Ga0501070_0034569 3300049586 Bacteria 4225
115 Ga0501070_0134887 3300049586 Bacteria 2038
116 Ga0501070_0238282 3300049586 Bacteria 1489
117 Ga0501073_0047233 3300049589 Bacteria 3026
118 Ga0501073_0066936 3300049589 Bacteria 2504
119 Ga0501073_0125954 3300049589 Bacteria 1776
120 Ga0501074_0030421 3300049590 Bacteria 3913
121 Ga0501074_0046465 3300049590 Bacteria 3139
122 Ga0501074_0156822 3300049590 Bacteria 1626
123 Ga0501076_0101601 3300049592 Bacteria 2318
124 Ga0501077_0009070 3300049593 Bacteria 6176
125 Ga0501079_0125675 3300049741 Bacteria 1995
126 Ga0501080_0000001 3300049742 Bacteria 241365
127 Ga0501080_0040819 3300049742 Bacteria 4327
128 Ga0501080_0187191 3300049742 Bacteria 1903
129 Ga0501080_0295865 3300049742 Bacteria 1469
130 Ga0501083_0007197 3300049744 Bacteria 7902
131 Ga0501083_0013677 3300049744 Bacteria 5675
132 Ga0501083_0024526 3300049744 Bacteria 4178
133 Ga0501083_0129226 3300049744 Bacteria 1656
134 Ga0501035_0000015 3300049822 Bacteria 246493
135 Ga0501035_0049300 3300049822 Bacteria 3774
136 Ga0501044_0000026 3300049823 Bacteria 183624
137 Ga0501044_0013740 3300049823 Bacteria 8750
138 Ga0501044_0030717 3300049823 Bacteria 5660
139 Ga0501044_0044315 3300049823 Bacteria 4616
140 Ga0501044_0178970 3300049823 Bacteria 2088
141 Ga0500616_0001472 3300053153 Bacteria 22431
142 Ga0500616_0007926 3300053153 Bacteria 6672
143 Ga0500636_0004158 3300053177 Bacteria 8191
144 Ga0501084_0016711 3300054114 Bacteria 6093
145 Ga0501084_0031969 3300054114 Bacteria 4401
146 Ga0501084_0038830 3300054114 Bacteria 3980
147 Ga0501082_0008009 3300060353 Bacteria 9123
148 Ga0501082_0065166 3300060353 Bacteria 3137
149 Ga0501082_0107952 3300060353 Bacteria 2408
150 Ga0501082_0212117 3300060353 Bacteria 1684
151 Ga0501082_0294445 3300060353 Bacteria 1413
152 Ga0530510_0024936 3300061734 Bacteria 4274
153 2917557285 2917554339 Bacteria 4987857
154 2508729296 2508501050 Bacteria 9633614
155 2509077891 2508501114 Bacteria 7082538
156 2523470731 2523231067 Bacteria 5230452
157 2644732237 2643221733 Bacteria 5690728
158 2671693355 2671180139 Bacteria 4196045
159 2715499312 2713897090 Bacteria 3353799
160 2739349052 2738543031 Bacteria 5769731
161 2774872875 2773857925 Bacteria 6472445
162 2776258753 2775506901 Bacteria 9631051
163 2835312920 2835312727 Bacteria 7413381
164 2840882912 2840878972 Bacteria 5483153
165 2854683826 2854681122 Bacteria 4548679
166 2855020584 2855020534 Bacteria 3204685
167 2882457969 2882456835 Bacteria 6863978
168 2884300828 2884298095 Bacteria 3823049
169 2898796069 2898795034 Bacteria 4294459
170 2899261950 2899259804 Bacteria 3320927
171 2899276347 2899275550 Bacteria 3958688
172 2919679805 2919679072 Bacteria 4629602
173 3000017845 3000017691 Bacteria 3772574
174 3000407570 3000405567 Bacteria 3779330
175 3003667623 3003665799 Bacteria 7279786
176 643604997 643348564 Bacteria 8839022
177 8002062554 8002060224 Bacteria 4026565
178 8054568614 8054563764 Bacteria 5592885
179 8057136451 8057132660 Bacteria 4061191
180 JGI25153J46596_10012072
181 Ga0070683_100131255
182 Ga0070680_100039056
183 Ga0070682_100005762
184 Ga0070660_100005903
185 Ga0070674_100146071
186 Ga0070663_100001086
187 Ga0070681_10000939
188 Ga0070679_100035956
189 Ga0070684_100115142
190 Ga0068853_100012916
191 Ga0070695_100032539
192 Ga0070696_100070323
193 Ga0070693_100084834
194 Ga0070664_100049843
195 Ga0068856_100170190
196 Ga0068861_100230375
197 Ga0068860_100132795
198 Ga0070712_100115359
199 Ga0068871_100307311
200 Ga0075428_100007093
201 Ga0105241_10013897
202 Ga0105237_10006667
203 Ga0105239_10567005
204 Ga0157369_10159644
205 Ga0157372_10038744
206 Ga0157380_10122633
207 Ga0213873_10003991
208 Ga0213876_10001035
209 Ga0213876_10001072
210 Ga0213875_10002982
211 Ga0213871_10010139
212 Ga0209758_1000186
213 Ga0207654_10015914
214 Ga0207693_10128395
215 Ga0207657_10030121
216 Ga0207652_10019094
217 Ga0207669_10151775
218 Ga0207661_10070601
219 Ga0207639_10027448
220 Ga0207678_10000635
221 Ga0207708_10220632
222 Ga0207675_100226813
223 Ga0265328_10005958
224 Ga0265325_10073632
225 Ga0265340_10001499
226 Ga0265340_10018971
227 Ga0265339_10007439
228 Ga0265339_10088216
229 Ga0265331_10000707
230 Ga0265331_10064151
231 Ga0265316_10013496
232 Ga0265316_10015587
233 Ga0265316_10070462
234 Ga0307408_100032202
235 Ga0265313_10011754
236 Ga0265313_10052762
237 Ga0265313_10054399
238 Ga0265314_10003005
239 Ga0265314_10033693
240 Ga0265342_10009082
241 Ga0265342_10014665
242 Ga0316576_10032016
243 Ga0307409_100025991
244 Ga0373936_0070204
245 Ga0373945_0052466
246 Ga0373943_0003058
247 Ga0373935_0031751
248 Ga0373947_0005812
249 Ga0373925_0002418
250 Ga0395905_0126507
251 Ga0436364_0079232
252 Ga0436364_1068422
253 Ga0436365_0141715
254 Ga0436365_0247802
255 Ga0436365_1712708
256 Ga0436360_0773738
257 Ga0436361_0946762
258 Ga0436363_0405250
259 Ga0436363_0457214
260 Ga0436363_0602817
261 Ga0436363_1260891
262 Ga0436362_1096230
263 Ga0451576_0001174
264 Ga0496100_0054809
265 Ga0496103_0040912
266 Ga0496104_0114392
267 Ga0496106_0038971
268 Ga0496107_0014980
269 Ga0496115_0006428
270 Ga0501031_0120730
271 Ga0501032_0005003
272 Ga0501034_0000068
273 Ga0501034_0000469
274 Ga0501034_0081817
275 Ga0501034_0111287
276 Ga0501034_0184307
277 Ga0501034_0209425
278 Ga0501039_0000138
279 Ga0501043_0141372
280 Ga0501046_0001138
281 Ga0501047_0000873
282 Ga0501047_0012864
283 Ga0501047_0151314
284 Ga0501047_0180015
285 Ga0501067_0000203
286 Ga0501067_0000581
287 Ga0501067_0002784
288 Ga0501067_0037206
289 Ga0501067_0054739
290 Ga0501067_0065796
291 Ga0501069_0015267
292 Ga0501070_0025582
293 Ga0501070_0034569
294 Ga0501070_0134887
295 Ga0501070_0238282
296 Ga0501073_0047233
297 Ga0501073_0066936
298 Ga0501073_0125954
299 Ga0501074_0030421
300 Ga0501074_0046465
301 Ga0501074_0156822
302 Ga0501076_0101601
303 Ga0501077_0009070
304 Ga0501079_0125675
305 Ga0501080_0000001
306 Ga0501080_0040819
307 Ga0501080_0187191
308 Ga0501080_0295865
309 Ga0501083_0007197
310 Ga0501083_0013677
311 Ga0501083_0024526
312 Ga0501083_0129226
313 Ga0501035_0000015
314 Ga0501035_0049300
315 Ga0501044_0000026
316 Ga0501044_0013740
317 Ga0501044_0030717
318 Ga0501044_0044315
319 Ga0501044_0178970
320 Ga0500616_0001472
321 Ga0500616_0007926
322 Ga0500636_0004158
323 Ga0501084_0016711
324 Ga0501084_0031969
325 Ga0501084_0038830
326 Ga0501082_0008009
327 Ga0501082_0065166
328 Ga0501082_0107952
329 Ga0501082_0212117
330 Ga0501082_0294445
331 Ga0530510_0024936
332 2917557285
333 2508729296
334 2509077891
335 2523470731
336 2644732237
337 2671693355
338 2715499312
339 2739349052
340 2774872875
341 2776258753
342 2835312920
343 2840882912
344 2854683826
345 2855020584
346 2882457969
347 2884300828
348 2898796069
349 2899261950
350 2899276347
351 2919679805
352 3000017845
353 3000407570
354 3003667623
355 643604997
356 8002062554
357 8054568614
358 8057136451

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04101

Glyco_tran_28_C

Glycosyltransferase family 28 C-terminal domain

181

348

0.97

PF03033

Glyco_transf_28

Glycosyltransferase family 28 N-terminal domain

1

138

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3s2u-assembly1.cif.gz_A crystal structure of the pseudomonas aeruginosa murg:udp-glcnac substrate complex 0.858 11 346
3s2u-assembly1.cif.gz_A crystal structure of the pseudomonas aeruginosa murg:udp-glcnac substrate complex 0.8505 11 346
1nlm-assembly1.cif.gz_B crystal structure of murg:glcnac complex 0.7973 11 347
1nlm-assembly1.cif.gz_B crystal structure of murg:glcnac complex 0.7686 11 347
7d1i-assembly1.cif.gz_B-2 crystal structure of acinetobacter baumannii murg 0.7458 10 345
ID Description Score Start End Superfamily
af_K7L509_198_322_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9019 205 329 3.40.50.2000
af_K7L509_198_322_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8751 205 329 3.40.50.2000
3s2uA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.875 150 329 3.40.50.2000
af_P17443_163_337_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.87 151 331 3.40.50.2000
af_P17443_163_337_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8653 151 331 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A060BN88-F1-model_v4 Glyco_tran_28_C 0.982 159 290 GO:0050511
AF-A0A431JB04-F1-model_v4 deleted 0.9789 203 346
AF-A0A519JEV0-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 0.9732 203 347 GO:0050511
AF-A0A7Y7CM76-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 0.9683 114 348 GO:0050511
AF-A0A060BN88-F1-model_v4 Glyco_tran_28_C 0.9675 159 290 GO:0050511

Map