F274538

General Info

Members Datasets Scaffolds Average Seq Length
179 124 358 411

Family's Representative Sequence

Representative Sequence 3300049579|Ga0501043_0207205|Ga0501043_0207205_213_1481
Length 422
Sequence MSSNTRRWALGALLAAGAVLAGTPAWAQKEIVVGVQCDRVGPTQTVSTIMCPGFHDYIALVNSRGGVEGYKIRVVEIDNEYKVPPGVEGYERQKKEGALSVALYGTPIVAALTQRVNEDKIPGTSPGFGTAVGADGKRYPYSFPIAASYWSQGAMGVKFAKDRLGGSLKGKKIAYLMYDNPAGKEPLPILEDLAKSEGFELKVFAVPAPGVEMGAQVLDIAQRYRADFVISHLFGRAPSVSIKEFKRVGFPLSKVIAFVWGSAEADIEAAGGYGVANGYYTMQFAGVGSDYKVNHDIIDMYKKQGKQPPKEMASTVYYNRGVVWAAIHVEAMRNAIKAKNGAMPTGEDVKNGFEKVNAKSLESLGGMAPPLEITPLDHEGGGWVQVFQAKDGKLVKATEWTQAYRDVIKKHLDAEAKKAAGG

Samples

Sample ID Description Type Environment
1 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
72 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
77 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
94 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
103 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
104 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
105 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
113 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
114 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
115 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
119 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
120 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
121 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
122 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
123 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.44
Metatranscriptomes 0.56
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.59
Nodule 0
Rhizoplane 0
Rhizosphere 92.18
Stem 0
Stem Tuber 0
Unclassified 2.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501043_0207205 3300049579 Bacteria 1520
2 Ga0070676_10069067 3300005328 Bacteria 2117
3 Ga0070690_100072786 3300005330 Bacteria 2235
4 Ga0068869_100006903 3300005334 Bacteria 7224
5 Ga0070666_10125550 3300005335 Bacteria 1781
6 Ga0070680_100053001 3300005336 Bacteria 3311
7 Ga0070692_10025147 3300005345 Bacteria 2934
8 Ga0070714_100062174 3300005435 Bacteria 3209
9 Ga0070713_100007119 3300005436 Bacteria 7820
10 Ga0070713_100098557 3300005436 Bacteria 2528
11 Ga0070711_100036930 3300005439 Bacteria 3276
12 Ga0070694_100150218 3300005444 Bacteria 1701
13 Ga0070708_100000133 3300005445 Bacteria 50894
14 Ga0070708_100043026 3300005445 Bacteria 3968
15 Ga0070708_100104418 3300005445 Bacteria 2598
16 Ga0070681_10178226 3300005458 Bacteria 2047
17 Ga0070706_100297348 3300005467 Bacteria 1506
18 Ga0070707_100005690 3300005468 Bacteria 11632
19 Ga0070707_100021318 3300005468 Bacteria 6124
20 Ga0070707_100064235 3300005468 Bacteria 3524
21 Ga0070707_100134211 3300005468 Bacteria 2408
22 Ga0070707_100180220 3300005468 Bacteria 2059
23 Ga0070698_100000271 3300005471 Bacteria 52585
24 Ga0070698_100138099 3300005471 Bacteria 2390
25 Ga0070699_100002542 3300005518 Bacteria 16390
26 Ga0070699_100052904 3300005518 Bacteria 3514
27 Ga0070699_100088931 3300005518 Bacteria 2698
28 Ga0070699_100199824 3300005518 Bacteria 1777
29 Ga0070697_100004892 3300005536 Bacteria 10281
30 Ga0070697_100027448 3300005536 Bacteria 4554
31 Ga0070697_100062241 3300005536 Bacteria 3045
32 Ga0070697_100076232 3300005536 Bacteria 2758
33 Ga0070697_100115383 3300005536 Bacteria 2242
34 Ga0070695_100015118 3300005545 Bacteria 4658
35 Ga0070693_100092376 3300005547 Bacteria 1827
36 Ga0070665_100128452 3300005548 Bacteria 2537
37 Ga0070665_100377181 3300005548 Bacteria 1425
38 Ga0068856_100090311 3300005614 Bacteria 3047
39 Ga0068856_100258428 3300005614 Bacteria 1757
40 Ga0068859_100046624 3300005617 Bacteria 4352
41 Ga0068860_100131692 3300005843 Bacteria 2400
42 Ga0068862_100049793 3300005844 Bacteria 3579
43 Ga0081455_10004200 3300005937 Bacteria 16237
44 Ga0081455_10011113 3300005937 Bacteria 9062
45 Ga0081455_10046886 3300005937 Bacteria 3746
46 Ga0081455_10055836 3300005937 Bacteria 3356
47 Ga0081540_1002759 3300005983 Bacteria 14251
48 Ga0081540_1038385 3300005983 Bacteria 2525
49 Ga0081539_10019057 3300005985 Bacteria 4719
50 Ga0075368_10017693 3300006042 Bacteria 2670
51 Ga0075363_100048348 3300006048 Bacteria 2262
52 Ga0075363_100058653 3300006048 Bacteria 2068
53 Ga0070716_100147203 3300006173 Bacteria 1510
54 Ga0070712_100006657 3300006175 Bacteria 7183
55 Ga0075362_10002176 3300006177 Bacteria 6490
56 Ga0075366_10031514 3300006195 Bacteria 3120
57 Ga0075428_100008752 3300006844 Bacteria 11226
58 Ga0075431_100006578 3300006847 Bacteria 11549
59 Ga0075431_100083658 3300006847 Bacteria 3294
60 Ga0075434_100074484 3300006871 Bacteria 3388
61 Ga0075434_100196854 3300006871 Bacteria 2035
62 Ga0075429_100052783 3300006880 Bacteria 3537
63 Ga0075429_100234114 3300006880 Bacteria 1609
64 Ga0068865_100122681 3300006881 Bacteria 1935
65 Ga0075436_100000722 3300006914 Bacteria 21877
66 Ga0097620_100046620 3300006931 Bacteria 4352
67 Ga0111539_10006265 3300009094 Bacteria 15359
68 Ga0114129_10028563 3300009147 Bacteria 7904
69 Ga0114129_10096248 3300009147 Bacteria 4099
70 Ga0105248_10142272 3300009177 Bacteria 2706
71 Ga0105248_10227047 3300009177 Bacteria 2102
72 Ga0105248_10251192 3300009177 Bacteria 1991
73 Ga0157369_10182139 3300013105 Bacteria 2210
74 Ga0157378_10217832 3300013297 Bacteria 1813
75 Ga0157379_10346858 3300014968 Bacteria 1359
76 Ga0213875_10000222 3300021388 Bacteria 57848
77 Ga0207699_10118957 3300025906 Bacteria 1705
78 Ga0207645_10120140 3300025907 Bacteria 1705
79 Ga0207684_10036372 3300025910 Bacteria 4179
80 Ga0207684_10061896 3300025910 Bacteria 3177
81 Ga0207684_10141219 3300025910 Bacteria 2070
82 Ga0207707_10177884 3300025912 Bacteria 1858
83 Ga0207693_10021490 3300025915 Bacteria 5127
84 Ga0207646_10003491 3300025922 Bacteria 17726
85 Ga0207646_10145678 3300025922 Bacteria 2134
86 Ga0207681_10020734 3300025923 Bacteria 4170
87 Ga0207700_10044091 3300025928 Bacteria 3281
88 Ga0207665_10058133 3300025939 Bacteria 2613
89 Ga0207711_10118368 3300025941 Bacteria 2363
90 Ga0207689_10009290 3300025942 Bacteria 8500
91 Ga0207667_10308816 3300025949 Bacteria 1615
92 Ga0207712_10034384 3300025961 Bacteria 3435
93 Ga0207712_10038301 3300025961 Bacteria 3278
94 Ga0207712_10124356 3300025961 Bacteria 1956
95 Ga0207702_10068535 3300026078 Bacteria 3048
96 Ga0207648_10049157 3300026089 Bacteria 3692
97 Ga0207648_10123026 3300026089 Bacteria 2281
98 Ga0207676_10141875 3300026095 Bacteria 2058
99 Ga0207674_10112605 3300026116 Bacteria 2695
100 Ga0207674_10117676 3300026116 Bacteria 2628
101 Ga0207428_10004177 3300027907 Bacteria 13837
102 Ga0268266_10004708 3300028379 Bacteria 12984
103 Ga0268265_10137759 3300028380 Bacteria 2039
104 Ga0268265_10140174 3300028380 Bacteria 2023
105 Ga0268264_10066515 3300028381 Bacteria 3039
106 Ga0307408_100052129 3300031548 Bacteria 2950
107 Ga0373951_0044251 3300035091 Bacteria 1081
108 Ga0373946_0012443 3300035171 Bacteria 3186
109 Ga0373946_0069773 3300035171 Bacteria 1515
110 Ga0373931_0020502 3300035691 Bacteria 3308
111 Ga0373935_0006266 3300035692 Bacteria 7083
112 Ga0373935_0015584 3300035692 Bacteria 4596
113 Ga0373935_0063710 3300035692 Bacteria 2363
114 Ga0373927_0003248 3300035695 Bacteria 11696
115 Ga0373927_0070763 3300035695 Bacteria 2258
116 Ga0373933_0008484 3300035724 Bacteria 5607
117 Ga0373947_0020084 3300035725 Bacteria 3856
118 Ga0373947_0233664 3300035725 Unclassified 1212
119 Ga0373937_0004410 3300036401 Bacteria 11963
120 Ga0373937_0020956 3300036401 Bacteria 5863
121 Ga0373925_0045737 3300037068 Bacteria 3252
122 Ga0395900_0047142 3300037418 Bacteria 4437
123 Ga0395900_0081065 3300037418 Bacteria 3334
124 Ga0395898_0023347 3300037466 Bacteria 6251
125 Ga0436364_0822297 3300037853 Bacteria 75298
126 Ga0395901_0007061 3300038443 Bacteria 11350
127 Ga0436365_1608481 3300039437 Bacteria 17599
128 Ga0436360_0307023 3300039438 Bacteria 1927
129 Ga0436361_0618908 3300039447 Bacteria 3546
130 Ga0436361_0695137 3300039447 Bacteria 2770
131 Ga0436363_0278842 3300039450 Bacteria 2428
132 Ga0451576_0387562 3300045051 Unclassified 1465
133 Ga0466967_0068707 3300045976 Bacteria 3164
134 Ga0495592_0077495 3300046454 Bacteria 2410
135 Ga0495629_0014136 3300046459 Bacteria 5751
136 Ga0495651_0102440 3300046462 Bacteria 2129
137 Ga0495651_0102446 3300046462 Bacteria 2129
138 Ga0495653_0125898 3300046463 Bacteria 1820
139 Ga0495639_0027346 3300046475 Bacteria 2524
140 Ga0495608_0085167 3300046511 Bacteria 2049
141 Ga0495628_0079240 3300046516 Bacteria 2554
142 Ga0495630_0045942 3300046517 Bacteria 3264
143 Ga0495665_0010660 3300046531 Bacteria 4978
144 Ga0495640_0103744 3300046533 Bacteria 1864
145 Ga0495640_0115835 3300046533 Bacteria 1746
146 Ga0495667_0038216 3300046559 Bacteria 3196
147 Ga0495635_0022513 3300046663 Bacteria 4390
148 Ga0495599_0133570 3300046678 Bacteria 1541
149 Ga0495658_0079883 3300046683 Bacteria 1917
150 Ga0495624_0053530 3300046690 Bacteria 2548
151 Ga0495674_0008998 3300047319 Bacteria 9487
152 Ga0495684_0008776 3300047471 Bacteria 7815
153 Ga0495602_0041227 3300048088 Bacteria 4220
154 Ga0501040_0000035 3300049576 Bacteria 62891
155 Ga0501047_0092376 3300049581 Bacteria 2905
156 Ga0501047_0235756 3300049581 Bacteria 1682
157 Ga0501068_0102638 3300049584 Bacteria 1773
158 Ga0501080_0351332 3300049742 Unclassified 1331
159 nmdc:mga03683_1937_c1 3300050489 Bacteria 6332
160 nmdc:mga03683_67473_c1 3300050489 Bacteria 1523
161 nmdc:mga03n38_29850_c1 3300050490 Bacteria 2286
162 nmdc:mga04h51_22333_c1 3300050495 Bacteria 1913
163 nmdc:mga07m45_155092_c1 3300050496 Bacteria 1328
164 nmdc:mga05p37_1966_c1 3300050507 Bacteria 23972
165 nmdc:mga05p37_440936_c1 3300050507 Bacteria 1510
166 nmdc:mga05p37_72614_c1 3300050507 Bacteria 4234
167 nmdc:mga08y16_9324_c1 3300050511 Bacteria 10294
168 nmdc:mga0n895_112896_c1 3300050512 Bacteria 2734
169 nmdc:mga0n895_311702_c1 3300050512 Unclassified 1595
170 nmdc:mga0n895_3668_c1 3300050512 Bacteria 12403
171 nmdc:mga0n895_54459_c1 3300050512 Bacteria 3935
172 nmdc:mga0rr50_43617_c1 3300050513 Bacteria 3284
173 nmdc:mga08x19_253078_c1 3300050514 Unclassified 1216
174 nmdc:mga08x19_2554_c1 3300050514 Bacteria 11057
175 nmdc:mga0a205_123386_c1 3300050515 Bacteria 2490
176 nmdc:mga0a205_26848_c1 3300050515 Bacteria 5495
177 Ga0495601_0002123 3300053077 Bacteria 11146
178 Ga0587077_004519 3300059493 Bacteria 1835
179 Ga0501082_0084862 3300060353 Bacteria 2731
180 Ga0501043_0207205
181 Ga0070676_10069067
182 Ga0070690_100072786
183 Ga0068869_100006903
184 Ga0070666_10125550
185 Ga0070680_100053001
186 Ga0070692_10025147
187 Ga0070714_100062174
188 Ga0070713_100007119
189 Ga0070713_100098557
190 Ga0070711_100036930
191 Ga0070694_100150218
192 Ga0070708_100000133
193 Ga0070708_100043026
194 Ga0070708_100104418
195 Ga0070681_10178226
196 Ga0070706_100297348
197 Ga0070707_100005690
198 Ga0070707_100021318
199 Ga0070707_100064235
200 Ga0070707_100134211
201 Ga0070707_100180220
202 Ga0070698_100000271
203 Ga0070698_100138099
204 Ga0070699_100002542
205 Ga0070699_100052904
206 Ga0070699_100088931
207 Ga0070699_100199824
208 Ga0070697_100004892
209 Ga0070697_100027448
210 Ga0070697_100062241
211 Ga0070697_100076232
212 Ga0070697_100115383
213 Ga0070695_100015118
214 Ga0070693_100092376
215 Ga0070665_100128452
216 Ga0070665_100377181
217 Ga0068856_100090311
218 Ga0068856_100258428
219 Ga0068859_100046624
220 Ga0068860_100131692
221 Ga0068862_100049793
222 Ga0081455_10004200
223 Ga0081455_10011113
224 Ga0081455_10046886
225 Ga0081455_10055836
226 Ga0081540_1002759
227 Ga0081540_1038385
228 Ga0081539_10019057
229 Ga0075368_10017693
230 Ga0075363_100048348
231 Ga0075363_100058653
232 Ga0070716_100147203
233 Ga0070712_100006657
234 Ga0075362_10002176
235 Ga0075366_10031514
236 Ga0075428_100008752
237 Ga0075431_100006578
238 Ga0075431_100083658
239 Ga0075434_100074484
240 Ga0075434_100196854
241 Ga0075429_100052783
242 Ga0075429_100234114
243 Ga0068865_100122681
244 Ga0075436_100000722
245 Ga0097620_100046620
246 Ga0111539_10006265
247 Ga0114129_10028563
248 Ga0114129_10096248
249 Ga0105248_10142272
250 Ga0105248_10227047
251 Ga0105248_10251192
252 Ga0157369_10182139
253 Ga0157378_10217832
254 Ga0157379_10346858
255 Ga0213875_10000222
256 Ga0207699_10118957
257 Ga0207645_10120140
258 Ga0207684_10036372
259 Ga0207684_10061896
260 Ga0207684_10141219
261 Ga0207707_10177884
262 Ga0207693_10021490
263 Ga0207646_10003491
264 Ga0207646_10145678
265 Ga0207681_10020734
266 Ga0207700_10044091
267 Ga0207665_10058133
268 Ga0207711_10118368
269 Ga0207689_10009290
270 Ga0207667_10308816
271 Ga0207712_10034384
272 Ga0207712_10038301
273 Ga0207712_10124356
274 Ga0207702_10068535
275 Ga0207648_10049157
276 Ga0207648_10123026
277 Ga0207676_10141875
278 Ga0207674_10112605
279 Ga0207674_10117676
280 Ga0207428_10004177
281 Ga0268266_10004708
282 Ga0268265_10137759
283 Ga0268265_10140174
284 Ga0268264_10066515
285 Ga0307408_100052129
286 Ga0373951_0044251
287 Ga0373946_0012443
288 Ga0373946_0069773
289 Ga0373931_0020502
290 Ga0373935_0006266
291 Ga0373935_0015584
292 Ga0373935_0063710
293 Ga0373927_0003248
294 Ga0373927_0070763
295 Ga0373933_0008484
296 Ga0373947_0020084
297 Ga0373947_0233664
298 Ga0373937_0004410
299 Ga0373937_0020956
300 Ga0373925_0045737
301 Ga0395900_0047142
302 Ga0395900_0081065
303 Ga0395898_0023347
304 Ga0436364_0822297
305 Ga0395901_0007061
306 Ga0436365_1608481
307 Ga0436360_0307023
308 Ga0436361_0618908
309 Ga0436361_0695137
310 Ga0436363_0278842
311 Ga0451576_0387562
312 Ga0466967_0068707
313 Ga0495592_0077495
314 Ga0495629_0014136
315 Ga0495651_0102440
316 Ga0495651_0102446
317 Ga0495653_0125898
318 Ga0495639_0027346
319 Ga0495608_0085167
320 Ga0495628_0079240
321 Ga0495630_0045942
322 Ga0495665_0010660
323 Ga0495640_0103744
324 Ga0495640_0115835
325 Ga0495667_0038216
326 Ga0495635_0022513
327 Ga0495599_0133570
328 Ga0495658_0079883
329 Ga0495624_0053530
330 Ga0495674_0008998
331 Ga0495684_0008776
332 Ga0495602_0041227
333 Ga0501040_0000035
334 Ga0501047_0092376
335 Ga0501047_0235756
336 Ga0501068_0102638
337 Ga0501080_0351332
338 nmdc:mga03683_1937_c1
339 nmdc:mga03683_67473_c1
340 nmdc:mga03n38_29850_c1
341 nmdc:mga04h51_22333_c1
342 nmdc:mga07m45_155092_c1
343 nmdc:mga05p37_1966_c1
344 nmdc:mga05p37_440936_c1
345 nmdc:mga05p37_72614_c1
346 nmdc:mga08y16_9324_c1
347 nmdc:mga0n895_112896_c1
348 nmdc:mga0n895_311702_c1
349 nmdc:mga0n895_3668_c1
350 nmdc:mga0n895_54459_c1
351 nmdc:mga0rr50_43617_c1
352 nmdc:mga08x19_253078_c1
353 nmdc:mga08x19_2554_c1
354 nmdc:mga0a205_123386_c1
355 nmdc:mga0a205_26848_c1
356 Ga0495601_0002123
357 Ga0587077_004519
358 Ga0501082_0084862

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13458

Peripla_BP_6

Periplasmic binding protein

30

393

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ru0-assembly2.cif.gz_B the crystal structure of abc transporter permease from pseudomonas fluorescens group 0.9257 30 412
4ru0-assembly2.cif.gz_B the crystal structure of abc transporter permease from pseudomonas fluorescens group 0.8593 30 412
3lkb-assembly1.cif.gz_A crystal structure of a branched chain amino acid abc transporter from thermus thermophilus with bound valine 0.8517 28 408
4n03-assembly1.cif.gz_A fatty acid abc transporter substrate-binding protein from thermomonospora curvata 0.8515 29 407
4kv7-assembly1.cif.gz_A the crystal structure of a possible leucine/isoleucine/valine-binding protein from rhodopirellula baltica sh 1 0.8413 28 395
ID Description Score Start End Superfamily
4jb2A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8665 152 282 3.40.50.2300
3sg0A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8452 152 283 3.40.50.2300
4nqrA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8434 153 283 3.40.50.2300
4mrmB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8431 30 143 3.40.50.2300
3td9A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8399 149 281 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A2V6UW34-F1-model_v4 Leucine-binding protein domain-containing protein 0.9512 9 295
AF-A0A3C1IKB3-F1-model_v4 ABC transporter permease 0.9493 30 412
AF-A0A2V6UW34-F1-model_v4 Leucine-binding protein domain-containing protein 0.9479 9 295
AF-A0A2E4WED4-F1-model_v4 ABC transporter permease 0.9405 115 412
AF-A0A537RHL9-F1-model_v4 ABC transporter permease 0.9309 21 134

Map