F274286

General Info

Members Datasets Scaffolds Average Seq Length
179 138 358 246

Family's Representative Sequence

Representative Sequence 3300045049|Ga0466959_0275872|Ga0466959_0275872_109_951
Length 280
Sequence LALLILYRKIQNAIDARRCCSYLLTKQYKTSEDRHMSTNEKVAFITGGNRGIGLETARELGGRGYRVVIGVRAPAGAESALQTLRAAGVQAEAVHYDAEKPATDQGVFDHLSRRYGKLDVLVNNAALATEVVVSRTVLTVSQEDLERTFAVNLFAVVRLTRKLLPLIEKAEAGRIVNVSSVLGSLGVHSAPSSPLAQAKPFAYDASKTALNAFTVHLAAELAGTRIKVNSVHPGWVKTEIGGPHATDEVTGSAATSVRLATIGSDGPNGGFFHREDALPW

Samples

Sample ID Description Type Environment
1 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
68 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
76 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
79 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
80 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
81 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
90 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
91 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
92 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
97 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
98 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
101 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
102 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
103 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
104 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
107 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
108 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
109 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
110 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
111 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
112 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
113 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
123 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
127 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
130 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
131 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
132 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
133 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
134 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
135 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
136 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
137 2842733646 Variovorax sp. R-72446 Isolate Unclassified
138 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.21
Metatranscriptomes 1.12
Isolates 1.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.59
Nodule 0
Rhizoplane 2.23
Rhizosphere 81.56
Stem 0
Stem Tuber 0
Unclassified 7.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466959_0275872 3300045049 Bacteria 1155
2 rootH2_10019078 3300003320 Bacteria 10480
3 rootH2_10056389 3300003320 Bacteria 11933
4 rootL2_10026315 3300003322 Bacteria 14699
5 rootH1_10225534 3300003323 Bacteria 6870
6 rootH1_10334581 3300003323 Bacteria 2068
7 Ga0065704_10071799 3300005289 Bacteria 9904
8 Ga0070658_10002449 3300005327 Bacteria 15524
9 Ga0070658_10523359 3300005327 Bacteria 1025
10 Ga0070683_100316151 3300005329 Bacteria 1486
11 Ga0070670_100438208 3300005331 Bacteria 1157
12 Ga0070660_100353805 3300005339 Bacteria 1210
13 Ga0070661_100074737 3300005344 Bacteria 2496
14 Ga0070661_100287259 3300005344 Bacteria 1277
15 Ga0070675_100234479 3300005354 Bacteria 1602
16 Ga0070667_100561797 3300005367 Bacteria 1049
17 Ga0070711_100427101 3300005439 Bacteria 1081
18 Ga0070663_100001910 3300005455 Bacteria 11634
19 Ga0070699_100146451 3300005518 Bacteria 2087
20 Ga0070679_100277443 3300005530 Bacteria 1629
21 Ga0068853_100303029 3300005539 Bacteria 1477
22 Ga0070665_100278890 3300005548 Bacteria 1673
23 Ga0068855_100009732 3300005563 Bacteria 11596
24 Ga0068855_100041194 3300005563 Bacteria 5475
25 Ga0070664_100014915 3300005564 Bacteria 6340
26 Ga0068852_100309165 3300005616 Bacteria 1532
27 Ga0068859_100197663 3300005617 Bacteria 2095
28 Ga0068863_100647437 3300005841 Bacteria 1048
29 Ga0068863_100756890 3300005841 Bacteria 967
30 Ga0068860_100770520 3300005843 Bacteria 975
31 Ga0070717_10622596 3300006028 Bacteria 979
32 Ga0075366_10089826 3300006195 Bacteria 1840
33 Ga0075366_10317671 3300006195 Bacteria 954
34 Ga0097620_100197653 3300006931 Bacteria 2095
35 Ga0075435_100302188 3300007076 Bacteria 1369
36 Ga0105251_10010092 3300009011 Bacteria 5511
37 Ga0105240_10623538 3300009093 Bacteria 1185
38 Ga0105248_10000047 3300009177 Bacteria 163513
39 Ga0105248_10028764 3300009177 Bacteria 6194
40 Ga0105248_10239665 3300009177 Bacteria 2042
41 Ga0105248_10301466 3300009177 Bacteria 1804
42 Ga0105237_10465072 3300009545 Bacteria 1271
43 Ga0105238_10023736 3300009551 Bacteria 6250
44 Ga0105238_10175642 3300009551 Bacteria 2118
45 Ga0105239_10772510 3300010375 Bacteria 1100
46 Ga0157371_10141314 3300013102 Bacteria 1714
47 Ga0157369_10211796 3300013105 Bacteria 2031
48 Ga0157369_10235444 3300013105 Bacteria 1914
49 Ga0157374_10117864 3300013296 Unclassified 2560
50 Ga0163162_10002233 3300013306 Bacteria 18192
51 Ga0157372_10037412 3300013307 Bacteria 5354
52 Ga0157372_10162200 3300013307 Bacteria 2584
53 Ga0157372_10164051 3300013307 Bacteria 2569
54 Ga0157372_10226221 3300013307 Bacteria 2169
55 Ga0157372_10805497 3300013307 Bacteria 1091
56 Ga0157372_10841004 3300013307 Unclassified 1066
57 Ga0157375_10406622 3300013308 Bacteria 1528
58 Ga0157375_10450820 3300013308 Bacteria 1452
59 Ga0163163_10202530 3300014325 Unclassified 2033
60 Ga0157376_10191567 3300014969 Bacteria 1875
61 Ga0157376_10873903 3300014969 Unclassified 916
62 Ga0213872_10001040 3300021361 Bacteria 19342
63 Ga0213875_10052398 3300021388 Bacteria 1911
64 Ga0207713_1015508 3300025735 Bacteria 3906
65 Ga0207647_10005694 3300025904 Bacteria 9095
66 Ga0207705_10000890 3300025909 Bacteria 24460
67 Ga0207657_10126719 3300025919 Bacteria 2097
68 Ga0207652_10522562 3300025921 Bacteria 1068
69 Ga0207650_10329495 3300025925 Bacteria 1252
70 Ga0207650_10488768 3300025925 Bacteria 1028
71 Ga0207700_10380593 3300025928 Bacteria 1234
72 Ga0207690_10199222 3300025932 Bacteria 1520
73 Ga0207711_10000040 3300025941 Bacteria 162754
74 Ga0207711_10040886 3300025941 Unclassified 3946
75 Ga0207711_10437377 3300025941 Bacteria 1217
76 Ga0207679_10059423 3300025945 Bacteria 2837
77 Ga0207667_10052507 3300025949 Bacteria 4293
78 Ga0207640_10334866 3300025981 Bacteria 1210
79 Ga0207677_10286443 3300026023 Bacteria 1355
80 Ga0207703_10301727 3300026035 Bacteria 1461
81 Ga0207678_10004212 3300026067 Bacteria 12909
82 Ga0207641_10017751 3300026088 Bacteria 5830
83 Ga0207648_10053072 3300026089 Bacteria 3544
84 Ga0207674_10118368 3300026116 Bacteria 2619
85 Ga0307515_10047889 3300028794 Bacteria 6480
86 Ga0307515_10204704 3300028794 Bacteria 1838
87 Ga0265338_10062133 3300028800 Bacteria 3267
88 Ga0265338_10192882 3300028800 Bacteria 1543
89 Ga0265762_1003202 3300030760 Bacteria 2926
90 Ga0265760_10002482 3300031090 Bacteria 5382
91 Ga0265328_10013068 3300031239 Bacteria 3292
92 Ga0265331_10000374 3300031250 Bacteria 46611
93 Ga0265331_10006193 3300031250 Bacteria 7101
94 Ga0265331_10008865 3300031250 Bacteria 5692
95 Ga0265327_10000213 3300031251 Bacteria 121151
96 Ga0265327_10000792 3300031251 Bacteria 48747
97 Ga0265327_10000923 3300031251 Bacteria 43037
98 Ga0265327_10018149 3300031251 Bacteria 4373
99 Ga0265327_10032903 3300031251 Bacteria 2898
100 Ga0265327_10038165 3300031251 Bacteria 2624
101 Ga0265316_10014898 3300031344 Bacteria 6820
102 Ga0307513_10145080 3300031456 Bacteria 2293
103 Ga0307508_10003494 3300031616 Bacteria 15852
104 Ga0307514_10068602 3300031649 Bacteria 2672
105 Ga0265314_10022505 3300031711 Bacteria 4828
106 Ga0265314_10036842 3300031711 Bacteria 3550
107 Ga0265314_10167852 3300031711 Bacteria 1328
108 Ga0316576_10218074 3300031727 Bacteria 1436
109 Ga0316578_10054545 3300031728 Bacteria 2345
110 Ga0307412_10297754 3300031911 Bacteria 1273
111 Ga0307411_10051768 3300032005 Bacteria 2681
112 Ga0316583_10010878 3300032133 Bacteria 3277
113 Ga0373957_0088120 3300035120 Bacteria 1231
114 Ga0373955_0034498 3300035172 Bacteria 2673
115 Ga0373937_0016230 3300036401 Bacteria 6609
116 Ga0316584_0367816 3300036712 Unclassified 1030
117 Ga0395899_0060719 3300037312 Bacteria 2785
118 Ga0395900_0002931 3300037418 Bacteria 18585
119 Ga0395905_0535318 3300037471 Unclassified 1072
120 Ga0436364_0512855 3300037853 Bacteria 11699
121 Ga0436365_0002599 3300039437 Bacteria 2628
122 Ga0436360_0255384 3300039438 Bacteria 1675
123 Ga0436360_0719653 3300039438 Bacteria 1182
124 Ga0436361_0108113 3300039447 Unclassified 3688
125 Ga0436361_0581961 3300039447 Bacteria 37615
126 Ga0451853_2659349 3300041512 Bacteria 1650
127 Ga0439448_0003021 3300042005 Bacteria 4622
128 Ga0466966_0028448 3300044684 Bacteria 3641
129 Ga0466959_0207340 3300045049 Bacteria 1363
130 Ga0466958_0181994 3300045836 Bacteria 1334
131 Ga0466958_0383025 3300045836 Unclassified 907
132 Ga0466967_0106311 3300045976 Bacteria 2572
133 Ga0466967_0659350 3300045976 Unclassified 1035
134 Ga0495641_0116810 3300046461 Bacteria 1190
135 Ga0495580_0198805 3300046472 Bacteria 1382
136 Ga0495580_0323013 3300046472 Bacteria 1049
137 Ga0495605_0030172 3300046474 Bacteria 2783
138 Ga0495594_0040074 3300046499 Unclassified 2562
139 Ga0495606_0016027 3300046507 Bacteria 5739
140 Ga0495618_0083588 3300046514 Bacteria 2039
141 Ga0495620_0000077 3300046515 Bacteria 80658
142 Ga0495631_0017414 3300046518 Bacteria 3401
143 Ga0495642_0203009 3300046528 Bacteria 864
144 Ga0495652_0131818 3300046529 Unclassified 1978
145 Ga0495654_0019764 3300046530 Bacteria 3518
146 Ga0495654_0047162 3300046530 Bacteria 2118
147 Ga0495640_0356863 3300046533 Bacteria 902
148 Ga0495609_0000013 3300046538 Bacteria 328540
149 Ga0495668_0017002 3300046616 Bacteria 4224
150 Ga0495625_0043447 3300046660 Bacteria 3259
151 Ga0495635_0041714 3300046663 Bacteria 3170
152 Ga0495671_0005984 3300046692 Bacteria 7071
153 Ga0495600_0104911 3300046809 Bacteria 1842
154 Ga0495687_071834 3300047443 Bacteria 1385
155 Ga0495677_0069165 3300047445 Bacteria 1315
156 Ga0496101_0457346 3300048904 Bacteria 1007
157 Ga0496105_0049789 3300048908 Bacteria 3460
158 Ga0496109_0204881 3300048912 Bacteria 1855
159 Ga0496110_0023642 3300048913 Bacteria 5229
160 Ga0496122_0074429 3300048925 Bacteria 2403
161 Ga0496126_0018569 3300048929 Bacteria 6885
162 Ga0495678_000852 3300049459 Bacteria 27240
163 Ga0495682_0000100 3300049460 Bacteria 76271
164 Ga0501032_0194452 3300049569 Bacteria 1325
165 Ga0501037_0011019 3300049573 Bacteria 6650
166 Ga0501280_000262 3300049776 Bacteria 13332
167 Ga0501044_0565184 3300049823 Bacteria 1033
168 nmdc:mga0k408_55674_c2 3300050493 Bacteria 2005
169 Ga0495595_0344594 3300053084 Bacteria 752
170 Ga0500556_0000005 3300053104 Bacteria 581135
171 Ga0500556_0121558 3300053104 Bacteria 1019
172 Ga0500593_000050 3300053117 Bacteria 42339
173 Ga0500568_0000001 3300053139 Bacteria 988705
174 Ga0500603_001877 3300053150 Unclassified 4687
175 Ga0500616_0017485 3300053153 Bacteria 4067
176 Ga0500622_0000902 3300053156 Bacteria 25277
177 2516018773 2515154189 Bacteria 9629850
178 2842738328 2842733646 Bacteria 5716726
179 2909401818 2909399089 Bacteria 3922598
180 Ga0466959_0275872
181 rootH2_10019078
182 rootH2_10056389
183 rootL2_10026315
184 rootH1_10225534
185 rootH1_10334581
186 Ga0065704_10071799
187 Ga0070658_10002449
188 Ga0070658_10523359
189 Ga0070683_100316151
190 Ga0070670_100438208
191 Ga0070660_100353805
192 Ga0070661_100074737
193 Ga0070661_100287259
194 Ga0070675_100234479
195 Ga0070667_100561797
196 Ga0070711_100427101
197 Ga0070663_100001910
198 Ga0070699_100146451
199 Ga0070679_100277443
200 Ga0068853_100303029
201 Ga0070665_100278890
202 Ga0068855_100009732
203 Ga0068855_100041194
204 Ga0070664_100014915
205 Ga0068852_100309165
206 Ga0068859_100197663
207 Ga0068863_100647437
208 Ga0068863_100756890
209 Ga0068860_100770520
210 Ga0070717_10622596
211 Ga0075366_10089826
212 Ga0075366_10317671
213 Ga0097620_100197653
214 Ga0075435_100302188
215 Ga0105251_10010092
216 Ga0105240_10623538
217 Ga0105248_10000047
218 Ga0105248_10028764
219 Ga0105248_10239665
220 Ga0105248_10301466
221 Ga0105237_10465072
222 Ga0105238_10023736
223 Ga0105238_10175642
224 Ga0105239_10772510
225 Ga0157371_10141314
226 Ga0157369_10211796
227 Ga0157369_10235444
228 Ga0157374_10117864
229 Ga0163162_10002233
230 Ga0157372_10037412
231 Ga0157372_10162200
232 Ga0157372_10164051
233 Ga0157372_10226221
234 Ga0157372_10805497
235 Ga0157372_10841004
236 Ga0157375_10406622
237 Ga0157375_10450820
238 Ga0163163_10202530
239 Ga0157376_10191567
240 Ga0157376_10873903
241 Ga0213872_10001040
242 Ga0213875_10052398
243 Ga0207713_1015508
244 Ga0207647_10005694
245 Ga0207705_10000890
246 Ga0207657_10126719
247 Ga0207652_10522562
248 Ga0207650_10329495
249 Ga0207650_10488768
250 Ga0207700_10380593
251 Ga0207690_10199222
252 Ga0207711_10000040
253 Ga0207711_10040886
254 Ga0207711_10437377
255 Ga0207679_10059423
256 Ga0207667_10052507
257 Ga0207640_10334866
258 Ga0207677_10286443
259 Ga0207703_10301727
260 Ga0207678_10004212
261 Ga0207641_10017751
262 Ga0207648_10053072
263 Ga0207674_10118368
264 Ga0307515_10047889
265 Ga0307515_10204704
266 Ga0265338_10062133
267 Ga0265338_10192882
268 Ga0265762_1003202
269 Ga0265760_10002482
270 Ga0265328_10013068
271 Ga0265331_10000374
272 Ga0265331_10006193
273 Ga0265331_10008865
274 Ga0265327_10000213
275 Ga0265327_10000792
276 Ga0265327_10000923
277 Ga0265327_10018149
278 Ga0265327_10032903
279 Ga0265327_10038165
280 Ga0265316_10014898
281 Ga0307513_10145080
282 Ga0307508_10003494
283 Ga0307514_10068602
284 Ga0265314_10022505
285 Ga0265314_10036842
286 Ga0265314_10167852
287 Ga0316576_10218074
288 Ga0316578_10054545
289 Ga0307412_10297754
290 Ga0307411_10051768
291 Ga0316583_10010878
292 Ga0373957_0088120
293 Ga0373955_0034498
294 Ga0373937_0016230
295 Ga0316584_0367816
296 Ga0395899_0060719
297 Ga0395900_0002931
298 Ga0395905_0535318
299 Ga0436364_0512855
300 Ga0436365_0002599
301 Ga0436360_0255384
302 Ga0436360_0719653
303 Ga0436361_0108113
304 Ga0436361_0581961
305 Ga0451853_2659349
306 Ga0439448_0003021
307 Ga0466966_0028448
308 Ga0466959_0207340
309 Ga0466958_0181994
310 Ga0466958_0383025
311 Ga0466967_0106311
312 Ga0466967_0659350
313 Ga0495641_0116810
314 Ga0495580_0198805
315 Ga0495580_0323013
316 Ga0495605_0030172
317 Ga0495594_0040074
318 Ga0495606_0016027
319 Ga0495618_0083588
320 Ga0495620_0000077
321 Ga0495631_0017414
322 Ga0495642_0203009
323 Ga0495652_0131818
324 Ga0495654_0019764
325 Ga0495654_0047162
326 Ga0495640_0356863
327 Ga0495609_0000013
328 Ga0495668_0017002
329 Ga0495625_0043447
330 Ga0495635_0041714
331 Ga0495671_0005984
332 Ga0495600_0104911
333 Ga0495687_071834
334 Ga0495677_0069165
335 Ga0496101_0457346
336 Ga0496105_0049789
337 Ga0496109_0204881
338 Ga0496110_0023642
339 Ga0496122_0074429
340 Ga0496126_0018569
341 Ga0495678_000852
342 Ga0495682_0000100
343 Ga0501032_0194452
344 Ga0501037_0011019
345 Ga0501280_000262
346 Ga0501044_0565184
347 nmdc:mga0k408_55674_c2
348 Ga0495595_0344594
349 Ga0500556_0000005
350 Ga0500556_0121558
351 Ga0500593_000050
352 Ga0500568_0000001
353 Ga0500603_001877
354 Ga0500616_0017485
355 Ga0500622_0000902
356 2516018773
357 2842738328
358 2909401818

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

41

249

0.92

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

47

264

0.86

PF08659

KR

KR domain

42

232

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i1j-assembly1.cif.gz_A structure of a putative short chain dehydrogenase from pseudomonas syringae 0.8483 4 219
1uzl-assembly1.cif.gz_B-2 maba from mycobacterium tuberculosis 0.8457 3 219
3gvc-assembly1.cif.gz_A-2 crystal structure of probable short-chain dehydrogenase-reductase from mycobacterium tuberculosis 0.8435 4 219
5uzx-assembly1.cif.gz_A crystal structure of putative short-chain dehydrogenase/reductase from burkholderia multivorans with bound nadp 0.8419 3 226
2fwm-assembly1.cif.gz_X crystal structure of e. coli enta, a 2,3-dihydrodihydroxy benzoate dehydrogenase 0.8408 4 219
ID Description Score Start End Superfamily
af_Q4D5D5_47_298_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9433 2 226 3.40.50.720
af_Q4D5D5_47_298_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9351 2 226 3.40.50.720
af_Q2FV41_2_233_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9284 3 225 3.40.50.720
af_Q2FV41_2_233_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9125 3 225 3.40.50.720
af_A4IB16_1_233_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9102 3 226 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A521N8E6-F1-model_v4 Short-chain dehydrogenase 0.9998 153 226 GO:0016020
GO:0016491
AF-A0A0S4IYC7-F1-model_v4 Short chain dehydrogenase, putative 0.9882 95 226 GO:0016491
AF-A0A838TIX0-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9863 115 226 GO:0016616
AF-G7TL48-F1-model_v4 Short chain dehydrogenase 0.9849 122 226 GO:0016616
AF-A0A3C0GPT4-F1-model_v4 Short-chain dehydrogenase 0.9847 96 226 GO:0016491

Map