F274090

General Info

Members Datasets Scaffolds Average Seq Length
179 122 163 493

Family's Representative Sequence

Representative Sequence 3300031995|Ga0307409_100005953|Ga0307409_1000059536
Length 520
Sequence MTEGSEAEAMTEPRGLRLATRQDTTMIPDPRRVIAKLFVPGEDAAVVHSRAGRLIDRIAALDEEETAGILRETLERFGGRHRDLEDTWRHHYDLVHHRVDRDGRLSANARLLVGAYFTHEYAVEAAALCNPSIVEHPDQSDLEKGQVRAAVSVRQIGEGHVSSIGFATAILGPGTHLDVAERTGPLIAGRRVPALHRRDLFAAGLTDTGWDNEVSATVLSSLPERFDDTTFERILGDLPSDLRSRANAQDTLEQLRRTIAVSYAIEFPADTLLHQRVLWPASADESNGMEDARFVRFTDDDNGPVYRATYTAYDGRHVATRALFSDDLRRFQLTPMRGPAARNKGIALFPRRVGGRHLALCRSDGETTGLTVLDRENRWQAPLTLQRPRRGWELIQVGNCGSPIETDAGWLVLSHGVGPMRRYAIGVLLLDLNHPERVIAELREPLLDPDRTERDGYVPNVLYSCGGLIHAGTLWIPYGASDTRVGFATVPVAALLDAMTDEVPSGVRPSRIPSARGGSR

Samples

Sample ID Description Type Environment
1 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
2 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
3 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
4 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
5 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
6 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
7 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
8 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
9 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
10 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
11 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
12 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
20 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
88 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
89 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
94 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
95 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
96 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
97 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
98 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
99 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
100 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
113 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
116 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
117 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
118 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
119 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
120 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
121 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
122 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.06
Metatranscriptomes 0
Isolates 8.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.23
Nodule 2.23
Rhizoplane 3.35
Rhizosphere 74.3
Stem 0
Stem Tuber 0
Unclassified 17.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10008581 3300005327 Bacteria 8216
2 Ga0070658_10011168 3300005327 Bacteria 7200
3 Ga0070658_10011324 3300005327 Bacteria 7152
4 Ga0070658_10015221 3300005327 Bacteria 6154
5 Ga0070658_10027577 3300005327 Bacteria 4555
6 Ga0070676_10019317 3300005328 Bacteria 3790
7 Ga0070683_100004077 3300005329 Bacteria 11974
8 Ga0070683_100013896 3300005329 Bacteria 7033
9 Ga0068869_100006568 3300005334 Bacteria 7379
10 Ga0068868_100007150 3300005338 Bacteria 7933
11 Ga0070660_100002012 3300005339 Bacteria 14013
12 Ga0070687_100022778 3300005343 Bacteria 2967
13 Ga0070661_100015276 3300005344 Bacteria 5419
14 Ga0070661_100020706 3300005344 Bacteria 4691
15 Ga0070661_100050789 3300005344 Bacteria 3034
16 Ga0070668_100000351 3300005347 Bacteria 30405
17 Ga0070675_100000719 3300005354 Bacteria 23032
18 Ga0070659_100001482 3300005366 Bacteria 16896
19 Ga0070659_100017063 3300005366 Bacteria 5457
20 Ga0070667_100009099 3300005367 Bacteria 8218
21 Ga0070700_100009272 3300005441 Bacteria 5398
22 Ga0070663_100001252 3300005455 Bacteria 13945
23 Ga0070685_10005636 3300005466 Bacteria 6355
24 Ga0070679_100024261 3300005530 Bacteria 5943
25 Ga0070679_100134271 3300005530 Bacteria 2456
26 Ga0070684_100039784 3300005535 Bacteria 4046
27 Ga0068853_100006956 3300005539 Bacteria 9035
28 Ga0068855_100001951 3300005563 Bacteria 25622
29 Ga0068855_100059281 3300005563 Bacteria 4479
30 Ga0070664_100002180 3300005564 Bacteria 15734
31 Ga0068857_100006290 3300005577 Bacteria 10159
32 Ga0068859_100004339 3300005617 Bacteria 14463
33 Ga0068851_10000097 3300005834 Bacteria 47630
34 Ga0068858_100001296 3300005842 Bacteria 25821
35 Ga0068858_100003138 3300005842 Bacteria 16543
36 Ga0068858_100032373 3300005842 Bacteria 4856
37 Ga0068858_100052112 3300005842 Bacteria 3786
38 Ga0068860_100053209 3300005843 Bacteria 3850
39 Ga0068860_100071436 3300005843 Bacteria 3299
40 Ga0068862_100000869 3300005844 Bacteria 29454
41 Ga0068862_100018302 3300005844 Bacteria 5835
42 Ga0068862_100046382 3300005844 Bacteria 3708
43 Ga0081539_10064912 3300005985 Bacteria 1984
44 Ga0081539_10085983 3300005985 Bacteria 1638
45 Ga0075365_10090437 3300006038 Bacteria 2085
46 Ga0097620_100004339 3300006931 Bacteria 14463
47 Ga0111539_10000268 3300009094 Bacteria 62086
48 Ga0111539_10004342 3300009094 Bacteria 18562
49 Ga0111539_10011935 3300009094 Bacteria 10891
50 Ga0105245_10063240 3300009098 Bacteria 3341
51 Ga0105247_10001794 3300009101 Bacteria 15063
52 Ga0105247_10076312 3300009101 Bacteria 2104
53 Ga0105248_10002099 3300009177 Bacteria 22076
54 Ga0105237_10001300 3300009545 Bacteria 33250
55 Ga0105237_10013087 3300009545 Bacteria 8711
56 Ga0105237_10110308 3300009545 Bacteria 2743
57 Ga0105237_10203347 3300009545 Bacteria 1981
58 Ga0105238_10016260 3300009551 Bacteria 7531
59 Ga0105249_10012339 3300009553 Bacteria 7529
60 Ga0105249_10096668 3300009553 Bacteria 2772
61 Ga0105239_10066456 3300010375 Bacteria 3961
62 Ga0157369_10044603 3300013105 Bacteria 4824
63 Ga0157369_10105553 3300013105 Bacteria 2999
64 Ga0157374_10135548 3300013296 Bacteria 2386
65 Ga0163162_10051470 3300013306 Bacteria 4133
66 Ga0163163_10004851 3300014325 Bacteria 11559
67 Ga0157379_10002088 3300014968 Bacteria 16586
68 Ga0157379_10006342 3300014968 Bacteria 10187
69 Ga0207656_10000003 3300025321 Bacteria 771644
70 Ga0207710_10000152 3300025900 Bacteria 77406
71 Ga0207705_10010013 3300025909 Bacteria 6901
72 Ga0207705_10016849 3300025909 Bacteria 5234
73 Ga0207705_10067929 3300025909 Bacteria 2580
74 Ga0207707_10018670 3300025912 Bacteria 6047
75 Ga0207695_10001243 3300025913 Bacteria 43579
76 Ga0207671_10000002 3300025914 Bacteria 1144816
77 Ga0207671_10010233 3300025914 Bacteria 7762
78 Ga0207662_10034855 3300025918 Bacteria 2938
79 Ga0207649_10027135 3300025920 Bacteria 3358
80 Ga0207649_10038010 3300025920 Bacteria 2912
81 Ga0207652_10025496 3300025921 Bacteria 4917
82 Ga0207694_10000073 3300025924 Bacteria 118507
83 Ga0207659_10002646 3300025926 Bacteria 10661
84 Ga0207687_10032625 3300025927 Bacteria 3528
85 Ga0207690_10000567 3300025932 Bacteria 24151
86 Ga0207690_10022286 3300025932 Bacteria 3938
87 Ga0207711_10000352 3300025941 Bacteria 48788
88 Ga0207711_10010733 3300025941 Bacteria 7619
89 Ga0207689_10014661 3300025942 Bacteria 6658
90 Ga0207661_10068900 3300025944 Bacteria 2882
91 Ga0207679_10022373 3300025945 Bacteria 4303
92 Ga0207667_10003046 3300025949 Bacteria 20796
93 Ga0207667_10011612 3300025949 Bacteria 10226
94 Ga0207667_10030203 3300025949 Bacteria 5865
95 Ga0207668_10000506 3300025972 Bacteria 24416
96 Ga0207668_10056384 3300025972 Bacteria 2736
97 Ga0207658_10015310 3300025986 Bacteria 5262
98 Ga0207677_10008769 3300026023 Bacteria 5664
99 Ga0207703_10000736 3300026035 Bacteria 32224
100 Ga0207703_10001083 3300026035 Bacteria 25916
101 Ga0207639_10004812 3300026041 Bacteria 9109
102 Ga0207678_10001496 3300026067 Bacteria 21424
103 Ga0207708_10007379 3300026075 Bacteria 8127
104 Ga0207674_10003923 3300026116 Bacteria 18105
105 Ga0207698_10010367 3300026142 Bacteria 5982
106 Ga0207698_10025697 3300026142 Bacteria 4153
107 Ga0268265_10000070 3300028380 Bacteria 138524
108 Ga0268265_10021332 3300028380 Bacteria 4536
109 Ga0307515_10000042 3300028794 Bacteria 309141
110 Ga0307515_10000044 3300028794 Bacteria 303041
111 Ga0307515_10009638 3300028794 Bacteria 18636
112 Ga0307515_10021975 3300028794 Bacteria 11273
113 Ga0307515_10030376 3300028794 Bacteria 9078
114 Ga0265338_10053052 3300028800 Unclassified 3631
115 Ga0307512_10003247 3300030522 Bacteria 19158
116 Ga0307512_10003646 3300030522 Bacteria 17602
117 Ga0307512_10004405 3300030522 Bacteria 15477
118 Ga0307512_10045688 3300030522 Bacteria 3581
119 Ga0265340_10026300 3300031247 Bacteria 2942
120 Ga0307513_10024081 3300031456 Bacteria 7091
121 Ga0307513_10040714 3300031456 Bacteria 5135
122 Ga0307513_10054455 3300031456 Bacteria 4289
123 Ga0307513_10086237 3300031456 Bacteria 3220
124 Ga0265313_10025821 3300031595 Bacteria 3106
125 Ga0307508_10004762 3300031616 Bacteria 13104
126 Ga0307508_10010664 3300031616 Bacteria 8403
127 Ga0307508_10020955 3300031616 Bacteria 5941
128 Ga0307516_10002773 3300031730 Bacteria 23112
129 Ga0307516_10024519 3300031730 Bacteria 6160
130 Ga0307516_10030236 3300031730 Bacteria 5468
131 Ga0307409_100005953 3300031995 Bacteria 7099
132 Ga0307409_100042196 3300031995 Bacteria 3414
133 Ga0307416_100214263 3300032002 Bacteria 1840
134 Ga0307415_100008195 3300032126 Bacteria 5781
135 Ga0373951_0000248 3300035091 Bacteria 17904
136 Ga0373954_0071609 3300035118 Bacteria 1648
137 Ga0373942_0000219 3300035207 Bacteria 15033
138 Ga0316574_0025138 3300035398 Bacteria 3573
139 Ga0316582_0030185 3300036647 Bacteria 3300
140 Ga0451791_0174199 3300041451 Bacteria 2424
141 Ga0495590_0000394 3300046457 Bacteria 22018
142 Ga0495606_0000715 3300046507 Bacteria 51355
143 Ga0495622_0026376 3300046557 Bacteria 2714
144 Ga0495668_0000197 3300046616 Bacteria 88776
145 Ga0495625_0001354 3300046660 Bacteria 30220
146 Ga0495649_0068382 3300046694 Bacteria 1906
147 Ga0495626_0000025 3300048091 Bacteria 209356
148 Ga0496103_0017190 3300048906 Bacteria 4325
149 Ga0496106_0105876 3300048909 Bacteria 2185
150 Ga0496111_0057492 3300048914 Bacteria 2816
151 Ga0496112_0050433 3300048915 Bacteria 4081
152 Ga0496114_0001491 3300048917 Bacteria 17773
153 Ga0496119_0000067 3300048922 Bacteria 162404
154 Ga0496119_0001043 3300048922 Bacteria 35409
155 Ga0496119_0008135 3300048922 Bacteria 9283
156 Ga0496120_0009380 3300048923 Bacteria 6954
157 Ga0496120_0015484 3300048923 Bacteria 5025
158 Ga0496126_0218003 3300048929 Bacteria 1604
159 nmdc:mga08y16_5845_c1 3300050511 Bacteria 12892
160 nmdc:mga08y16_9548_c1 3300050511 Bacteria 10183
161 Ga0500635_0001716 3300053080 Bacteria 5317
162 Ga0500600_0087229 3300053149 Bacteria 1673
163 Ga0500620_000033 3300053155 Bacteria 27521

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009094 Ga0111539_10011935 Ga0111539_100119359 432
2 3300031730 Ga0307516_10002773 Ga0307516_1000277315 456
3 3300028794 Ga0307515_10000042 Ga0307515_1000004241 458
4 3300030522 Ga0307512_10004405 Ga0307512_100044056 459
5 3300009098 Ga0105245_10063240 Ga0105245_100632402 460
6 3300005347 Ga0070668_100000351 Ga0070668_1000003513 461
7 3300005844 Ga0068862_100018302 Ga0068862_1000183024 461
8 3300025972 Ga0207668_10000506 Ga0207668_100005063 461
9 3300028380 Ga0268265_10021332 Ga0268265_100213324 461
10 3300035091 Ga0373951_0000248 Ga0373951_0000248_7131_8564 466
11 3300053149 Ga0500600_0087229 Ga0500600_0087229_66_1505 467
12 3300035118 Ga0373954_0071609 Ga0373954_0071609_148_1596 469
13 3300048917 Ga0496114_0001491 Ga0496114_0001491_10378_11835 471
14 iso_pu_bacteria 2862993130 2862996020 471
15 3300025909 Ga0207705_10016849 Ga0207705_100168494 472
16 3300048929 Ga0496126_0218003 Ga0496126_0218003_120_1574 473
17 3300046557 Ga0495622_0026376 Ga0495622_0026376_544_2019 474
18 3300046694 Ga0495649_0068382 Ga0495649_0068382_40_1536 474
19 iso_pu_bacteria 2675903058 2676473885 474
20 iso_pu_bacteria 2772190715 2772641555 474
21 iso_pu_bacteria 2827628540 2827628775 474
22 iso_pu_bacteria 2858895516 2858899208 474
23 iso_pu_bacteria 2880489317 2880493874 474
24 iso_pu_bacteria 2880495981 2880498473 474
25 iso_pu_bacteria 2929219909 2929220500 474
26 iso_pu_bacteria 8054704163 8054710173 474
27 iso_pu_bacteria 8054734606 8054735216 474
28 iso_pu_bacteria 8055412473 8055418045 474
29 3300005327 Ga0070658_10027577 Ga0070658_100275773 475
30 3300005530 Ga0070679_100134271 Ga0070679_1001342712 475
31 3300025909 Ga0207705_10067929 Ga0207705_100679292 475
32 3300025921 Ga0207652_10025496 Ga0207652_100254962 475
33 3300031456 Ga0307513_10040714 Ga0307513_100407142 475
34 3300048906 Ga0496103_0017190 Ga0496103_0017190_2708_4168 475
35 3300048914 Ga0496111_0057492 Ga0496111_0057492_596_2056 475
36 iso_pu_bacteria 2887478801 2887479974 475
37 3300005327 Ga0070658_10011324 Ga0070658_100113249 476
38 3300013105 Ga0157369_10044603 Ga0157369_100446033 476
39 3300013306 Ga0163162_10051470 Ga0163162_100514703 476
40 3300025949 Ga0207667_10030203 Ga0207667_100302034 476
41 3300036647 Ga0316582_0030185 Ga0316582_0030185_1548_3020 476
42 iso_pu_bacteria 8055066027 8055069847 476
43 3300005617 Ga0068859_100004339 Ga0068859_1000043396 477
44 3300005844 Ga0068862_100000869 Ga0068862_10000086934 477
45 3300006931 Ga0097620_100004339 Ga0097620_1000043396 477
46 3300009094 Ga0111539_10000268 Ga0111539_1000026822 477
47 3300009553 Ga0105249_10012339 Ga0105249_100123395 477
48 3300014325 Ga0163163_10004851 Ga0163163_100048514 477
49 3300028380 Ga0268265_10000070 Ga0268265_100000708 477
50 3300046457 Ga0495590_0000394 Ga0495590_0000394_16353_17819 477
51 3300046507 Ga0495606_0000715 Ga0495606_0000715_28788_30260 477
52 3300046616 Ga0495668_0000197 Ga0495668_0000197_75950_77422 477
53 3300046660 Ga0495625_0001354 Ga0495625_0001354_9295_10767 477
54 3300048091 Ga0495626_0000025 Ga0495626_0000025_134158_135630 477
55 3300050511 nmdc:mga08y16_5845_c1 nmdc:mga08y16_5845_c1_9918_11429 477
56 3300005327 Ga0070658_10008581 Ga0070658_100085817 478
57 3300005327 Ga0070658_10011168 Ga0070658_100111686 478
58 3300005327 Ga0070658_10015221 Ga0070658_100152216 478
59 3300005328 Ga0070676_10019317 Ga0070676_100193173 478
60 3300005329 Ga0070683_100004077 Ga0070683_1000040778 478
61 3300005329 Ga0070683_100013896 Ga0070683_1000138967 478
62 3300005334 Ga0068869_100006568 Ga0068869_1000065683 478
63 3300005338 Ga0068868_100007150 Ga0068868_1000071502 478
64 3300005339 Ga0070660_100002012 Ga0070660_10000201212 478
65 3300005343 Ga0070687_100022778 Ga0070687_1000227783 478
66 3300005344 Ga0070661_100015276 Ga0070661_1000152763 478
67 3300005344 Ga0070661_100020706 Ga0070661_1000207062 478
68 3300005344 Ga0070661_100050789 Ga0070661_1000507892 478
69 3300005354 Ga0070675_100000719 Ga0070675_1000007194 478
70 3300005366 Ga0070659_100001482 Ga0070659_1000014829 478
71 3300005366 Ga0070659_100017063 Ga0070659_1000170636 478
72 3300005367 Ga0070667_100009099 Ga0070667_1000090995 478
73 3300005441 Ga0070700_100009272 Ga0070700_1000092722 478
74 3300005455 Ga0070663_100001252 Ga0070663_1000012527 478
75 3300005466 Ga0070685_10005636 Ga0070685_100056363 478
76 3300005530 Ga0070679_100024261 Ga0070679_1000242613 478
77 3300005535 Ga0070684_100039784 Ga0070684_1000397842 478
78 3300005539 Ga0068853_100006956 Ga0068853_1000069569 478
79 3300005563 Ga0068855_100001951 Ga0068855_1000019517 478
80 3300005563 Ga0068855_100059281 Ga0068855_1000592813 478
81 3300005564 Ga0070664_100002180 Ga0070664_1000021805 478
82 3300005577 Ga0068857_100006290 Ga0068857_1000062902 478
83 3300005834 Ga0068851_10000097 Ga0068851_100000972 478
84 3300005842 Ga0068858_100001296 Ga0068858_10000129617 478
85 3300005842 Ga0068858_100003138 Ga0068858_1000031384 478
86 3300005842 Ga0068858_100032373 Ga0068858_1000323732 478
87 3300005842 Ga0068858_100052112 Ga0068858_1000521123 478
88 3300005843 Ga0068860_100053209 Ga0068860_1000532092 478
89 3300005843 Ga0068860_100071436 Ga0068860_1000714362 478
90 3300005844 Ga0068862_100046382 Ga0068862_1000463822 478
91 3300005985 Ga0081539_10064912 Ga0081539_100649122 478
92 3300005985 Ga0081539_10085983 Ga0081539_100859832 478
93 3300006038 Ga0075365_10090437 Ga0075365_100904372 478
94 3300009094 Ga0111539_10004342 Ga0111539_100043427 478
95 3300009101 Ga0105247_10001794 Ga0105247_1000179411 478
96 3300009101 Ga0105247_10076312 Ga0105247_100763122 478
97 3300009177 Ga0105248_10002099 Ga0105248_1000209913 478
98 3300009545 Ga0105237_10001300 Ga0105237_1000130028 478
99 3300009545 Ga0105237_10013087 Ga0105237_100130873 478
100 3300009545 Ga0105237_10110308 Ga0105237_101103082 478
101 3300009545 Ga0105237_10203347 Ga0105237_102033471 478
102 3300009551 Ga0105238_10016260 Ga0105238_100162604 478
103 3300009553 Ga0105249_10096668 Ga0105249_100966682 478
104 3300010375 Ga0105239_10066456 Ga0105239_100664562 478
105 3300013105 Ga0157369_10105553 Ga0157369_101055533 478
106 3300013296 Ga0157374_10135548 Ga0157374_101355482 478
107 3300014968 Ga0157379_10002088 Ga0157379_100020884 478
108 3300014968 Ga0157379_10006342 Ga0157379_100063427 478
109 3300025321 Ga0207656_10000003 Ga0207656_1000000354 478
110 3300025900 Ga0207710_10000152 Ga0207710_1000015277 478
111 3300025909 Ga0207705_10010013 Ga0207705_100100135 478
112 3300025912 Ga0207707_10018670 Ga0207707_100186706 478
113 3300025913 Ga0207695_10001243 Ga0207695_100012432 478
114 3300025914 Ga0207671_10000002 Ga0207671_1000000256 478
115 3300025914 Ga0207671_10010233 Ga0207671_100102338 478
116 3300025918 Ga0207662_10034855 Ga0207662_100348553 478
117 3300025920 Ga0207649_10027135 Ga0207649_100271352 478
118 3300025920 Ga0207649_10038010 Ga0207649_100380101 478
119 3300025924 Ga0207694_10000073 Ga0207694_1000007351 478
120 3300025926 Ga0207659_10002646 Ga0207659_100026464 478
121 3300025927 Ga0207687_10032625 Ga0207687_100326252 478
122 3300025932 Ga0207690_10000567 Ga0207690_100005676 478
123 3300025932 Ga0207690_10022286 Ga0207690_100222863 478
124 3300025941 Ga0207711_10000352 Ga0207711_1000035213 478
125 3300025941 Ga0207711_10010733 Ga0207711_100107336 478
126 3300025942 Ga0207689_10014661 Ga0207689_100146613 478
127 3300025944 Ga0207661_10068900 Ga0207661_100689002 478
128 3300025945 Ga0207679_10022373 Ga0207679_100223732 478
129 3300025949 Ga0207667_10003046 Ga0207667_1000304617 478
130 3300025949 Ga0207667_10011612 Ga0207667_100116126 478
131 3300025972 Ga0207668_10056384 Ga0207668_100563842 478
132 3300025986 Ga0207658_10015310 Ga0207658_100153105 478
133 3300026023 Ga0207677_10008769 Ga0207677_100087692 478
134 3300026035 Ga0207703_10000736 Ga0207703_100007364 478
135 3300026035 Ga0207703_10001083 Ga0207703_1000108313 478
136 3300026041 Ga0207639_10004812 Ga0207639_100048123 478
137 3300026067 Ga0207678_10001496 Ga0207678_100014964 478
138 3300026075 Ga0207708_10007379 Ga0207708_100073793 478
139 3300026116 Ga0207674_10003923 Ga0207674_1000392312 478
140 3300026142 Ga0207698_10010367 Ga0207698_100103672 478
141 3300026142 Ga0207698_10025697 Ga0207698_100256973 478
142 3300028794 Ga0307515_10000044 Ga0307515_100000447 478
143 3300028794 Ga0307515_10009638 Ga0307515_100096382 478
144 3300028794 Ga0307515_10021975 Ga0307515_100219752 478
145 3300028794 Ga0307515_10030376 Ga0307515_100303763 478
146 3300028800 Ga0265338_10053052 Ga0265338_100530523 478
147 3300030522 Ga0307512_10003247 Ga0307512_1000324714 478
148 3300030522 Ga0307512_10003646 Ga0307512_100036463 478
149 3300030522 Ga0307512_10045688 Ga0307512_100456882 478
150 3300031247 Ga0265340_10026300 Ga0265340_100263002 478
151 3300031456 Ga0307513_10024081 Ga0307513_100240815 478
152 3300031456 Ga0307513_10054455 Ga0307513_100544552 478
153 3300031456 Ga0307513_10086237 Ga0307513_100862372 478
154 3300031595 Ga0265313_10025821 Ga0265313_100258212 478
155 3300031616 Ga0307508_10004762 Ga0307508_100047624 478
156 3300031616 Ga0307508_10010664 Ga0307508_100106644 478
157 3300031616 Ga0307508_10020955 Ga0307508_100209553 478
158 3300031730 Ga0307516_10024519 Ga0307516_100245192 478
159 3300031730 Ga0307516_10030236 Ga0307516_100302364 478
160 3300031995 Ga0307409_100005953 Ga0307409_1000059536 478
161 3300031995 Ga0307409_100042196 Ga0307409_1000421963 478
162 3300032002 Ga0307416_100214263 Ga0307416_1002142631 478
163 3300032126 Ga0307415_100008195 Ga0307415_1000081954 478
164 3300035207 Ga0373942_0000219 Ga0373942_0000219_12069_13547 478
165 3300035398 Ga0316574_0025138 Ga0316574_0025138_1773_3266 478
166 3300041451 Ga0451791_0174199 Ga0451791_0174199_629_2134 478
167 3300048909 Ga0496106_0105876 Ga0496106_0105876_276_1904 478
168 3300048915 Ga0496112_0050433 Ga0496112_0050433_683_2158 478
169 3300048922 Ga0496119_0000067 Ga0496119_0000067_44359_45831 478
170 3300048922 Ga0496119_0001043 Ga0496119_0001043_11292_12761 478
171 3300048922 Ga0496119_0008135 Ga0496119_0008135_715_2325 478
172 3300048923 Ga0496120_0009380 Ga0496120_0009380_1646_3118 478
173 3300048923 Ga0496120_0015484 Ga0496120_0015484_2672_4141 478
174 3300050511 nmdc:mga08y16_9548_c1 nmdc:mga08y16_9548_c1_6903_8414 478
175 3300053080 Ga0500635_0001716 Ga0500635_0001716_3272_4753 478
176 3300053155 Ga0500620_000033 Ga0500620_000033_7510_8991 478
177 iso_pu_bacteria 2684623035 2686534296 478
178 iso_pu_bacteria 2687453743 2689994527 478
179 iso_pu_bacteria 2895880812 2895882954 478

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04041

Glyco_hydro_130

beta-1,4-mannooligosaccharide phosphorylase

256

501

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7fip-assembly1.cif.gz_D the native structure of beta-1,2-mannobiose phosphorylase from thermoanaerobacter sp. 0.8244 98 468
5aye-assembly1.cif.gz_E crystal structure of ruminococcus albus beta-(1,4)-mannooligosaccharide phosphorylase (ramp2) in complexes with phosphate and beta-(1,4)-mannobiose 0.7977 102 473
3wau-assembly1.cif.gz_B crystal structure of 4-o-beta-d-mannosyl-d-glucose phosphorylase mgp complexed with m1p 0.7921 101 473
5ay9-assembly1.cif.gz_A crystal structure of ruminococcus albus 4-o-beta-d-mannosyl-d-glucose phosphorylase (ramp1) 0.7917 96 471
4kmi-assembly1.cif.gz_A crystal structure of 4-o-beta-d-mannosyl-d-glucose phosphorylase mgp complexed with po4 0.783 101 473
ID Description Score Start End Superfamily
af_P33219_22_118_3.10.450.300 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,;YebF/Colicin-M immunity protein 0.7984 280 310 3.10.450.300
3wauB00 Mainly Beta;5 Propeller;Tachylectin-2; Chain A;Glycosyl hydrolase domain; family 43 0.7921 101 473 2.115.10.20
5aydA00 Mainly Beta;5 Propeller;Tachylectin-2; Chain A;Glycosyl hydrolase domain; family 43 0.7852 102 473 2.115.10.20
af_Q59PS7_13_341_2.115.10.20 Mainly Beta;5 Propeller;Tachylectin-2; Chain A;Glycosyl hydrolase domain; family 43 0.7568 98 466 2.115.10.20
1gsnA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.7238 372 408 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A6N6KL07-F1-model_v4 Glycosidase 0.993 414 477 GO:0016757
GO:0016798
AF-A0A7W8UE72-F1-model_v4 Putative GH43/DUF377 family glycosyl hydrolase 0.9904 364 422 GO:0016757
GO:0016787
AF-A0A1V4RSC5-F1-model_v4 Glycosidase 0.9892 255 477 GO:0016757
GO:0016798
AF-A0A1M3D246-F1-model_v4 deleted 0.9888 361 477
AF-A0A0S6WZW3-F1-model_v4 Glycosidase 0.9881 239 473 GO:0016757

Feature Viewer

pLDDT pTM Quality
91.07 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map