F274043
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 179 | 130 | 173 | 285 |
Family's Representative Sequence
| Representative Sequence | 3300031090|Ga0265760_10004140|Ga0265760_100041402 |
| Length | 312 |
| Sequence | MALALSLTVEEQEAAERLVSLALVEDLRTLGDITSRALIGDARQGTVDIVVRQDGVVAGLPVAAIVTRQLDRQTTIQPLVSDGDKVSGGTTIAQAHGSWRSLLAAERTVLNFLMHLSGVATRTRQFVDRVAGTKALILETRKTLPGWRLLEKYAVRAGGGTNHRIGLFDGCLIKDNHLAAWREDHPRDSDEETIRGAVAAARSAIPAGIPLEIEVDTLDQLKAALAAAADIVLLDNMDAATIGQAVRIRDELAPRVLLEASGGVNLETVAAIAAAGVDRISVGSITHSAPALDIAFDWHGATGVPRAQTQSH |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2671180531 | Gemmata sp. SH-PL17 | Isolate | Unclassified |
| 2 | 2671180694 | Paenibacillus sp. A3 | Isolate | Unclassified |
| 3 | 2786546517 | Verrucomicrobia bacterium LW23 | Isolate | Rhizoplane |
| 4 | 2889295896 | Paenibacillus sp. PvR098 | Isolate | Rhizosphere |
| 5 | 2980125574 | Paenibacillus sp. tmac-D7 | Isolate | Unclassified |
| 6 | 2980182181 | Paenibacillus cymbidii R196 | Isolate | Unclassified |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 10 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 20 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 22 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 24 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 25 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 26 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 27 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 28 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 29 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 30 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 32 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 34 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 35 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 36 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 37 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 38 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 57 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 77 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 79 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 80 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 81 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 82 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 83 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 84 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 85 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 86 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 87 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 88 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 89 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 90 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 91 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 92 | 3300041486 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG | Metagenome | Rhizoplane |
| 93 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 94 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 95 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 96 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 97 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 98 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 99 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 100 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 101 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 102 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 114 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 115 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 124 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.09 |
| Metatranscriptomes | 0.56 |
| Isolates | 3.35 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.12 |
| Nodule | 0 |
| Rhizoplane | 2.23 |
| Rhizosphere | 92.74 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.91 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070658_10004198 | 3300005327 | Bacteria | 11797 |
| 2 | Ga0070658_10046388 | 3300005327 | Bacteria | 3517 |
| 3 | Ga0070683_100244449 | 3300005329 | Bacteria | 1707 |
| 4 | Ga0068868_100238496 | 3300005338 | Bacteria | 1527 |
| 5 | Ga0070689_100004659 | 3300005340 | Bacteria | 9290 |
| 6 | Ga0070687_100083934 | 3300005343 | Bacteria | 1745 |
| 7 | Ga0070675_100053044 | 3300005354 | Bacteria | 3334 |
| 8 | Ga0070673_100401237 | 3300005364 | Bacteria | 1226 |
| 9 | Ga0070714_100079206 | 3300005435 | Bacteria | 2856 |
| 10 | Ga0070713_100031143 | 3300005436 | Bacteria | 4246 |
| 11 | Ga0070711_100016508 | 3300005439 | Bacteria | 4691 |
| 12 | Ga0070700_100315853 | 3300005441 | Unclassified | 1146 |
| 13 | Ga0070681_10541683 | 3300005458 | Bacteria | 1077 |
| 14 | Ga0068867_100384384 | 3300005459 | Bacteria | 1180 |
| 15 | Ga0070679_100155009 | 3300005530 | Bacteria | 2266 |
| 16 | Ga0070679_100158881 | 3300005530 | Bacteria | 2235 |
| 17 | Ga0068853_100202635 | 3300005539 | Bacteria | 1806 |
| 18 | Ga0070665_100090094 | 3300005548 | Bacteria | 3073 |
| 19 | Ga0068855_100010345 | 3300005563 | Bacteria | 11251 |
| 20 | Ga0068855_100028162 | 3300005563 | Bacteria | 6720 |
| 21 | Ga0068855_100061597 | 3300005563 | Bacteria | 4384 |
| 22 | Ga0068852_100003052 | 3300005616 | Bacteria | 11652 |
| 23 | Ga0068852_100009148 | 3300005616 | Bacteria | 7338 |
| 24 | Ga0068852_100031302 | 3300005616 | Bacteria | 4389 |
| 25 | Ga0068852_100279578 | 3300005616 | Bacteria | 1609 |
| 26 | Ga0068859_100334321 | 3300005617 | Bacteria | 1609 |
| 27 | Ga0068851_10063209 | 3300005834 | Bacteria | 1901 |
| 28 | Ga0068858_100067933 | 3300005842 | Bacteria | 3302 |
| 29 | Ga0068858_100092387 | 3300005842 | Bacteria | 2817 |
| 30 | Ga0068858_100095429 | 3300005842 | Bacteria | 2771 |
| 31 | Ga0068858_100267971 | 3300005842 | Bacteria | 1624 |
| 32 | Ga0068860_100102510 | 3300005843 | Bacteria | 2731 |
| 33 | Ga0081539_10035239 | 3300005985 | Bacteria | 3011 |
| 34 | Ga0081539_10101416 | 3300005985 | Bacteria | 1466 |
| 35 | Ga0070716_100174070 | 3300006173 | Bacteria | 1407 |
| 36 | Ga0075366_10016852 | 3300006195 | Bacteria | 4200 |
| 37 | Ga0097621_100016508 | 3300006237 | Bacteria | 5583 |
| 38 | Ga0097621_100045549 | 3300006237 | Bacteria | 3544 |
| 39 | Ga0068871_100044095 | 3300006358 | Bacteria | 3585 |
| 40 | Ga0068871_100062668 | 3300006358 | Bacteria | 3039 |
| 41 | Ga0068871_100097405 | 3300006358 | Bacteria | 2459 |
| 42 | Ga0075428_100421968 | 3300006844 | Bacteria | 1429 |
| 43 | Ga0075434_100043116 | 3300006871 | Bacteria | 4474 |
| 44 | Ga0068865_100134325 | 3300006881 | Bacteria | 1857 |
| 45 | Ga0075436_100000976 | 3300006914 | Bacteria | 19195 |
| 46 | Ga0097620_100334337 | 3300006931 | Bacteria | 1609 |
| 47 | Ga0105240_10209884 | 3300009093 | Bacteria | 2276 |
| 48 | Ga0105240_10695866 | 3300009093 | Bacteria | 1110 |
| 49 | Ga0111539_10017869 | 3300009094 | Bacteria | 8783 |
| 50 | Ga0111539_11016151 | 3300009094 | Bacteria | 964 |
| 51 | Ga0105245_10019303 | 3300009098 | Bacteria | 5967 |
| 52 | Ga0105245_10078848 | 3300009098 | Bacteria | 3006 |
| 53 | Ga0105245_10098212 | 3300009098 | Bacteria | 2706 |
| 54 | Ga0105245_10119868 | 3300009098 | Bacteria | 2457 |
| 55 | Ga0105245_10222727 | 3300009098 | Bacteria | 1821 |
| 56 | Ga0105243_10046378 | 3300009148 | Bacteria | 3418 |
| 57 | Ga0105243_10207164 | 3300009148 | Bacteria | 1724 |
| 58 | Ga0105241_10027457 | 3300009174 | Bacteria | 4240 |
| 59 | Ga0105242_10022276 | 3300009176 | Bacteria | 4980 |
| 60 | Ga0105242_10052111 | 3300009176 | Bacteria | 3338 |
| 61 | Ga0105248_10179290 | 3300009177 | Bacteria | 2387 |
| 62 | Ga0105248_10380736 | 3300009177 | Bacteria | 1589 |
| 63 | Ga0105248_10532758 | 3300009177 | Bacteria | 1325 |
| 64 | Ga0105248_10544719 | 3300009177 | Bacteria | 1309 |
| 65 | Ga0105238_10016248 | 3300009551 | Bacteria | 7533 |
| 66 | Ga0105238_10360893 | 3300009551 | Bacteria | 1442 |
| 67 | Ga0157370_10031645 | 3300013104 | Bacteria | 5174 |
| 68 | Ga0157369_10018156 | 3300013105 | Bacteria | 7890 |
| 69 | Ga0157369_10169077 | 3300013105 | Bacteria | 2304 |
| 70 | Ga0157374_10065723 | 3300013296 | Bacteria | 3407 |
| 71 | Ga0157374_10397199 | 3300013296 | Bacteria | 1375 |
| 72 | Ga0157378_10054731 | 3300013297 | Bacteria | 3553 |
| 73 | Ga0157378_10193092 | 3300013297 | Bacteria | 1922 |
| 74 | Ga0157378_10447894 | 3300013297 | Bacteria | 1281 |
| 75 | Ga0163162_10104956 | 3300013306 | Bacteria | 2920 |
| 76 | Ga0157372_10081095 | 3300013307 | Bacteria | 3672 |
| 77 | Ga0157372_10133896 | 3300013307 | Bacteria | 2853 |
| 78 | Ga0157375_10009128 | 3300013308 | Bacteria | 8688 |
| 79 | Ga0157380_10039758 | 3300014326 | Bacteria | 3659 |
| 80 | Ga0157376_10029534 | 3300014969 | Bacteria | 4367 |
| 81 | Ga0213876_10071874 | 3300021384 | Bacteria | 1827 |
| 82 | Ga0207656_10103380 | 3300025321 | Bacteria | 1308 |
| 83 | Ga0207688_10104843 | 3300025901 | Bacteria | 1636 |
| 84 | Ga0207705_10002140 | 3300025909 | Bacteria | 15324 |
| 85 | Ga0207705_10031137 | 3300025909 | Bacteria | 3807 |
| 86 | Ga0207705_10056225 | 3300025909 | Bacteria | 2837 |
| 87 | Ga0207662_10027961 | 3300025918 | Bacteria | 3257 |
| 88 | Ga0207662_10155949 | 3300025918 | Bacteria | 1455 |
| 89 | Ga0207700_10009639 | 3300025928 | Bacteria | 6047 |
| 90 | Ga0207664_10118029 | 3300025929 | Bacteria | 2216 |
| 91 | Ga0207686_10018760 | 3300025934 | Bacteria | 3921 |
| 92 | Ga0207686_10058213 | 3300025934 | Bacteria | 2435 |
| 93 | Ga0207709_10104053 | 3300025935 | Bacteria | 1883 |
| 94 | Ga0207704_10176554 | 3300025938 | Bacteria | 1539 |
| 95 | Ga0207691_10072130 | 3300025940 | Bacteria | 3115 |
| 96 | Ga0207711_10073809 | 3300025941 | Bacteria | 2966 |
| 97 | Ga0207711_10209631 | 3300025941 | Bacteria | 1780 |
| 98 | Ga0207689_10182560 | 3300025942 | Bacteria | 1730 |
| 99 | Ga0207661_10158841 | 3300025944 | Bacteria | 1960 |
| 100 | Ga0207667_10171685 | 3300025949 | Bacteria | 2228 |
| 101 | Ga0207651_10131984 | 3300025960 | Bacteria | 1914 |
| 102 | Ga0207703_10078183 | 3300026035 | Bacteria | 2748 |
| 103 | Ga0207703_10470485 | 3300026035 | Bacteria | 1176 |
| 104 | Ga0207639_10176004 | 3300026041 | Bacteria | 1816 |
| 105 | Ga0207648_10050977 | 3300026089 | Bacteria | 3618 |
| 106 | Ga0207648_10331418 | 3300026089 | Bacteria | 1369 |
| 107 | Ga0207698_10048780 | 3300026142 | Bacteria | 3217 |
| 108 | Ga0207698_10070806 | 3300026142 | Bacteria | 2764 |
| 109 | Ga0207698_10286794 | 3300026142 | Bacteria | 1525 |
| 110 | Ga0207698_10620405 | 3300026142 | Bacteria | 1068 |
| 111 | Ga0207428_10040539 | 3300027907 | Bacteria | 3776 |
| 112 | Ga0268266_10408875 | 3300028379 | Bacteria | 1284 |
| 113 | Ga0265338_10000728 | 3300028800 | Bacteria | 56126 |
| 114 | Ga0265760_10004140 | 3300031090 | Bacteria | 4178 |
| 115 | Ga0265332_10000764 | 3300031238 | Bacteria | 19763 |
| 116 | Ga0265328_10001570 | 3300031239 | Bacteria | 10512 |
| 117 | Ga0265320_10016961 | 3300031240 | Bacteria | 4059 |
| 118 | Ga0265320_10114526 | 3300031240 | Bacteria | 1233 |
| 119 | Ga0265329_10042243 | 3300031242 | Bacteria | 1460 |
| 120 | Ga0265331_10003868 | 3300031250 | Bacteria | 9472 |
| 121 | Ga0265316_10000653 | 3300031344 | Bacteria | 38528 |
| 122 | Ga0265316_10004044 | 3300031344 | Bacteria | 14679 |
| 123 | Ga0265316_10049401 | 3300031344 | Bacteria | 3314 |
| 124 | Ga0265316_10140550 | 3300031344 | Unclassified | 1814 |
| 125 | Ga0265313_10027643 | 3300031595 | Bacteria | 2966 |
| 126 | Ga0307416_100093893 | 3300032002 | Bacteria | 2586 |
| 127 | Ga0307416_100599973 | 3300032002 | Bacteria | 1181 |
| 128 | Ga0373937_0127606 | 3300036401 | Bacteria | 2374 |
| 129 | Ga0395899_0125992 | 3300037312 | Bacteria | 1832 |
| 130 | Ga0395905_0223189 | 3300037471 | Bacteria | 1763 |
| 131 | Ga0436365_0962782 | 3300039437 | Bacteria | 7523 |
| 132 | Ga0436365_1344865 | 3300039437 | Bacteria | 3450 |
| 133 | Ga0451807_0506872 | 3300041486 | Bacteria | 1731 |
| 134 | Ga0451577_0003537 | 3300042876 | Bacteria | 17284 |
| 135 | Ga0451577_0090455 | 3300042876 | Bacteria | 2732 |
| 136 | Ga0466965_0114077 | 3300044683 | Bacteria | 1391 |
| 137 | Ga0466966_0077460 | 3300044684 | Bacteria | 2075 |
| 138 | Ga0466961_0040393 | 3300044693 | Bacteria | 2991 |
| 139 | Ga0453684_0359323 | 3300044712 | Bacteria | 1640 |
| 140 | Ga0466968_0008447 | 3300044735 | Bacteria | 3945 |
| 141 | Ga0466959_0002996 | 3300045049 | Bacteria | 10906 |
| 142 | Ga0466958_0135923 | 3300045836 | Bacteria | 1546 |
| 143 | Ga0466967_0548252 | 3300045976 | Bacteria | 1138 |
| 144 | Ga0495592_0030572 | 3300046454 | Bacteria | 4074 |
| 145 | Ga0495664_0221878 | 3300046477 | Bacteria | 1144 |
| 146 | Ga0495608_0009946 | 3300046511 | Bacteria | 6640 |
| 147 | Ga0495628_0039774 | 3300046516 | Bacteria | 3760 |
| 148 | Ga0495587_0073802 | 3300046536 | Bacteria | 1982 |
| 149 | Ga0495645_0003047 | 3300046543 | Bacteria | 11345 |
| 150 | Ga0495635_0009306 | 3300046663 | Bacteria | 6863 |
| 151 | Ga0495599_0020404 | 3300046678 | Bacteria | 4127 |
| 152 | Ga0495623_0016657 | 3300046679 | Bacteria | 4747 |
| 153 | Ga0495680_0290889 | 3300047322 | Bacteria | 1149 |
| 154 | Ga0495684_0355685 | 3300047471 | Bacteria | 1038 |
| 155 | Ga0496104_0030033 | 3300048907 | Bacteria | 5048 |
| 156 | Ga0496110_0014043 | 3300048913 | Bacteria | 6638 |
| 157 | Ga0501043_0055365 | 3300049579 | Bacteria | 3116 |
| 158 | Ga0501047_0040071 | 3300049581 | Bacteria | 4530 |
| 159 | Ga0501069_0027871 | 3300049585 | Bacteria | 3096 |
| 160 | Ga0501070_0011066 | 3300049586 | Bacteria | 7614 |
| 161 | Ga0501073_0016909 | 3300049589 | Bacteria | 5282 |
| 162 | Ga0501074_0000803 | 3300049590 | Bacteria | 19882 |
| 163 | Ga0501079_0254214 | 3300049741 | Bacteria | 1373 |
| 164 | Ga0501044_0170937 | 3300049823 | Bacteria | 2145 |
| 165 | nmdc:mga0k408_114627_c1 | 3300050493 | Bacteria | 1594 |
| 166 | nmdc:mga08y16_40705_c1 | 3300050511 | Bacteria | 4869 |
| 167 | nmdc:mga08x19_1888_c1 | 3300050514 | Bacteria | 12828 |
| 168 | Ga0495601_0001183 | 3300053077 | Bacteria | 14278 |
| 169 | Ga0495595_0084545 | 3300053084 | Bacteria | 1516 |
| 170 | Ga0495619_0012970 | 3300053085 | Bacteria | 5251 |
| 171 | Ga0495619_0104691 | 3300053085 | Bacteria | 1929 |
| 172 | Ga0501084_0104473 | 3300054114 | Bacteria | 2379 |
| 173 | Ga0501082_0139876 | 3300060353 | Bacteria | 2101 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005435 | Ga0070714_100079206 | Ga0070714_1000792062 | 248 |
| 2 | 3300025929 | Ga0207664_10118029 | Ga0207664_101180292 | 248 |
| 3 | 3300006844 | Ga0075428_100421968 | Ga0075428_1004219682 | 255 |
| 4 | 3300005985 | Ga0081539_10035239 | Ga0081539_100352393 | 258 |
| 5 | 3300006914 | Ga0075436_100000976 | Ga0075436_10000097610 | 259 |
| 6 | 3300050514 | nmdc:mga08x19_1888_c1 | nmdc:mga08x19_1888_c1_10895_11743 | 259 |
| 7 | 3300031344 | Ga0265316_10140550 | Ga0265316_101405502 | 271 |
| 8 | 3300049823 | Ga0501044_0170937 | Ga0501044_0170937_1254_2120 | 272 |
| 9 | 3300031344 | Ga0265316_10000653 | Ga0265316_1000065314 | 276 |
| 10 | 3300031344 | Ga0265316_10004044 | Ga0265316_100040445 | 276 |
| 11 | iso_pu_bacteria | 2671180694 | 2673822940 | 276 |
| 12 | iso_pu_bacteria | 2980125574 | 2980129807 | 276 |
| 13 | iso_pu_bacteria | 2786546517 | 2787438726 | 277 |
| 14 | iso_pu_bacteria | 2889295896 | 2889299007 | 277 |
| 15 | 3300044712 | Ga0453684_0359323 | Ga0453684_0359323_698_1588 | 278 |
| 16 | 3300005364 | Ga0070673_100401237 | Ga0070673_1004012371 | 279 |
| 17 | 3300005842 | Ga0068858_100067933 | Ga0068858_1000679334 | 279 |
| 18 | 3300009094 | Ga0111539_11016151 | Ga0111539_110161511 | 279 |
| 19 | 3300026089 | Ga0207648_10331418 | Ga0207648_103314182 | 279 |
| 20 | 3300042876 | Ga0451577_0003537 | Ga0451577_0003537_15725_16585 | 279 |
| 21 | 3300005441 | Ga0070700_100315853 | Ga0070700_1003158532 | 280 |
| 22 | 3300005842 | Ga0068858_100095429 | Ga0068858_1000954293 | 280 |
| 23 | 3300005985 | Ga0081539_10101416 | Ga0081539_101014162 | 280 |
| 24 | 3300028800 | Ga0265338_10000728 | Ga0265338_1000072820 | 280 |
| 25 | 3300031240 | Ga0265320_10016961 | Ga0265320_100169614 | 280 |
| 26 | 3300031595 | Ga0265313_10027643 | Ga0265313_100276431 | 280 |
| 27 | 3300044683 | Ga0466965_0114077 | Ga0466965_0114077_489_1361 | 280 |
| 28 | 3300044693 | Ga0466961_0040393 | Ga0466961_0040393_638_1510 | 280 |
| 29 | 3300044735 | Ga0466968_0008447 | Ga0466968_0008447_3001_3873 | 280 |
| 30 | 3300045049 | Ga0466959_0002996 | Ga0466959_0002996_5770_6642 | 280 |
| 31 | iso_pu_bacteria | 2671180531 | 2673165279 | 280 |
| 32 | 3300021384 | Ga0213876_10071874 | Ga0213876_100718742 | 281 |
| 33 | 3300039437 | Ga0436365_0962782 | Ga0436365_0962782_3204_4070 | 281 |
| 34 | 3300053085 | Ga0495619_0104691 | Ga0495619_0104691_13_900 | 281 |
| 35 | 3300005343 | Ga0070687_100083934 | Ga0070687_1000839342 | 282 |
| 36 | 3300006871 | Ga0075434_100043116 | Ga0075434_1000431162 | 282 |
| 37 | 3300009098 | Ga0105245_10078848 | Ga0105245_100788482 | 282 |
| 38 | 3300025918 | Ga0207662_10027961 | Ga0207662_100279612 | 282 |
| 39 | 3300031238 | Ga0265332_10000764 | Ga0265332_1000076416 | 282 |
| 40 | 3300031239 | Ga0265328_10001570 | Ga0265328_100015705 | 282 |
| 41 | 3300031240 | Ga0265320_10114526 | Ga0265320_101145262 | 282 |
| 42 | 3300031242 | Ga0265329_10042243 | Ga0265329_100422432 | 282 |
| 43 | 3300031250 | Ga0265331_10003868 | Ga0265331_100038686 | 282 |
| 44 | 3300031344 | Ga0265316_10049401 | Ga0265316_100494012 | 282 |
| 45 | 3300039437 | Ga0436365_1344865 | Ga0436365_1344865_55_930 | 282 |
| 46 | 3300005327 | Ga0070658_10004198 | Ga0070658_100041985 | 283 |
| 47 | 3300005327 | Ga0070658_10046388 | Ga0070658_100463882 | 283 |
| 48 | 3300005329 | Ga0070683_100244449 | Ga0070683_1002444492 | 283 |
| 49 | 3300005338 | Ga0068868_100238496 | Ga0068868_1002384961 | 283 |
| 50 | 3300005340 | Ga0070689_100004659 | Ga0070689_1000046592 | 283 |
| 51 | 3300005354 | Ga0070675_100053044 | Ga0070675_1000530442 | 283 |
| 52 | 3300005436 | Ga0070713_100031143 | Ga0070713_1000311432 | 283 |
| 53 | 3300005439 | Ga0070711_100016508 | Ga0070711_1000165082 | 283 |
| 54 | 3300005458 | Ga0070681_10541683 | Ga0070681_105416831 | 283 |
| 55 | 3300005459 | Ga0068867_100384384 | Ga0068867_1003843841 | 283 |
| 56 | 3300005530 | Ga0070679_100155009 | Ga0070679_1001550093 | 283 |
| 57 | 3300005530 | Ga0070679_100158881 | Ga0070679_1001588811 | 283 |
| 58 | 3300005539 | Ga0068853_100202635 | Ga0068853_1002026352 | 283 |
| 59 | 3300005548 | Ga0070665_100090094 | Ga0070665_1000900941 | 283 |
| 60 | 3300005563 | Ga0068855_100010345 | Ga0068855_1000103452 | 283 |
| 61 | 3300005563 | Ga0068855_100028162 | Ga0068855_1000281622 | 283 |
| 62 | 3300005563 | Ga0068855_100061597 | Ga0068855_1000615972 | 283 |
| 63 | 3300005616 | Ga0068852_100003052 | Ga0068852_1000030522 | 283 |
| 64 | 3300005616 | Ga0068852_100009148 | Ga0068852_1000091486 | 283 |
| 65 | 3300005616 | Ga0068852_100031302 | Ga0068852_1000313022 | 283 |
| 66 | 3300005616 | Ga0068852_100279578 | Ga0068852_1002795782 | 283 |
| 67 | 3300005617 | Ga0068859_100334321 | Ga0068859_1003343212 | 283 |
| 68 | 3300005834 | Ga0068851_10063209 | Ga0068851_100632092 | 283 |
| 69 | 3300005842 | Ga0068858_100092387 | Ga0068858_1000923872 | 283 |
| 70 | 3300005842 | Ga0068858_100267971 | Ga0068858_1002679712 | 283 |
| 71 | 3300005843 | Ga0068860_100102510 | Ga0068860_1001025102 | 283 |
| 72 | 3300006173 | Ga0070716_100174070 | Ga0070716_1001740701 | 283 |
| 73 | 3300006195 | Ga0075366_10016852 | Ga0075366_100168526 | 283 |
| 74 | 3300006237 | Ga0097621_100016508 | Ga0097621_1000165086 | 283 |
| 75 | 3300006237 | Ga0097621_100045549 | Ga0097621_1000455492 | 283 |
| 76 | 3300006358 | Ga0068871_100044095 | Ga0068871_1000440955 | 283 |
| 77 | 3300006358 | Ga0068871_100062668 | Ga0068871_1000626682 | 283 |
| 78 | 3300006358 | Ga0068871_100097405 | Ga0068871_1000974052 | 283 |
| 79 | 3300006881 | Ga0068865_100134325 | Ga0068865_1001343252 | 283 |
| 80 | 3300006931 | Ga0097620_100334337 | Ga0097620_1003343372 | 283 |
| 81 | 3300009093 | Ga0105240_10209884 | Ga0105240_102098843 | 283 |
| 82 | 3300009093 | Ga0105240_10695866 | Ga0105240_106958661 | 283 |
| 83 | 3300009094 | Ga0111539_10017869 | Ga0111539_100178698 | 283 |
| 84 | 3300009098 | Ga0105245_10019303 | Ga0105245_100193035 | 283 |
| 85 | 3300009098 | Ga0105245_10098212 | Ga0105245_100982122 | 283 |
| 86 | 3300009098 | Ga0105245_10119868 | Ga0105245_101198682 | 283 |
| 87 | 3300009098 | Ga0105245_10222727 | Ga0105245_102227272 | 283 |
| 88 | 3300009148 | Ga0105243_10046378 | Ga0105243_100463782 | 283 |
| 89 | 3300009148 | Ga0105243_10207164 | Ga0105243_102071642 | 283 |
| 90 | 3300009174 | Ga0105241_10027457 | Ga0105241_100274576 | 283 |
| 91 | 3300009176 | Ga0105242_10022276 | Ga0105242_100222766 | 283 |
| 92 | 3300009176 | Ga0105242_10052111 | Ga0105242_100521114 | 283 |
| 93 | 3300009177 | Ga0105248_10179290 | Ga0105248_101792901 | 283 |
| 94 | 3300009177 | Ga0105248_10380736 | Ga0105248_103807362 | 283 |
| 95 | 3300009177 | Ga0105248_10532758 | Ga0105248_105327582 | 283 |
| 96 | 3300009177 | Ga0105248_10544719 | Ga0105248_105447191 | 283 |
| 97 | 3300009551 | Ga0105238_10016248 | Ga0105238_100162487 | 283 |
| 98 | 3300009551 | Ga0105238_10360893 | Ga0105238_103608932 | 283 |
| 99 | 3300013104 | Ga0157370_10031645 | Ga0157370_100316456 | 283 |
| 100 | 3300013105 | Ga0157369_10018156 | Ga0157369_100181562 | 283 |
| 101 | 3300013105 | Ga0157369_10169077 | Ga0157369_101690772 | 283 |
| 102 | 3300013296 | Ga0157374_10065723 | Ga0157374_100657235 | 283 |
| 103 | 3300013296 | Ga0157374_10397199 | Ga0157374_103971992 | 283 |
| 104 | 3300013297 | Ga0157378_10054731 | Ga0157378_100547315 | 283 |
| 105 | 3300013297 | Ga0157378_10193092 | Ga0157378_101930921 | 283 |
| 106 | 3300013297 | Ga0157378_10447894 | Ga0157378_104478942 | 283 |
| 107 | 3300013306 | Ga0163162_10104956 | Ga0163162_101049562 | 283 |
| 108 | 3300013307 | Ga0157372_10081095 | Ga0157372_100810952 | 283 |
| 109 | 3300013307 | Ga0157372_10133896 | Ga0157372_101338962 | 283 |
| 110 | 3300013308 | Ga0157375_10009128 | Ga0157375_100091289 | 283 |
| 111 | 3300014326 | Ga0157380_10039758 | Ga0157380_100397583 | 283 |
| 112 | 3300014969 | Ga0157376_10029534 | Ga0157376_100295342 | 283 |
| 113 | 3300025321 | Ga0207656_10103380 | Ga0207656_101033801 | 283 |
| 114 | 3300025901 | Ga0207688_10104843 | Ga0207688_101048431 | 283 |
| 115 | 3300025909 | Ga0207705_10002140 | Ga0207705_1000214010 | 283 |
| 116 | 3300025909 | Ga0207705_10031137 | Ga0207705_100311372 | 283 |
| 117 | 3300025909 | Ga0207705_10056225 | Ga0207705_100562253 | 283 |
| 118 | 3300025918 | Ga0207662_10155949 | Ga0207662_101559492 | 283 |
| 119 | 3300025928 | Ga0207700_10009639 | Ga0207700_100096396 | 283 |
| 120 | 3300025934 | Ga0207686_10018760 | Ga0207686_100187601 | 283 |
| 121 | 3300025934 | Ga0207686_10058213 | Ga0207686_100582132 | 283 |
| 122 | 3300025935 | Ga0207709_10104053 | Ga0207709_101040532 | 283 |
| 123 | 3300025938 | Ga0207704_10176554 | Ga0207704_101765542 | 283 |
| 124 | 3300025940 | Ga0207691_10072130 | Ga0207691_100721302 | 283 |
| 125 | 3300025941 | Ga0207711_10073809 | Ga0207711_100738092 | 283 |
| 126 | 3300025941 | Ga0207711_10209631 | Ga0207711_102096312 | 283 |
| 127 | 3300025942 | Ga0207689_10182560 | Ga0207689_101825602 | 283 |
| 128 | 3300025944 | Ga0207661_10158841 | Ga0207661_101588412 | 283 |
| 129 | 3300025949 | Ga0207667_10171685 | Ga0207667_101716853 | 283 |
| 130 | 3300025960 | Ga0207651_10131984 | Ga0207651_101319842 | 283 |
| 131 | 3300026035 | Ga0207703_10078183 | Ga0207703_100781832 | 283 |
| 132 | 3300026035 | Ga0207703_10470485 | Ga0207703_104704852 | 283 |
| 133 | 3300026041 | Ga0207639_10176004 | Ga0207639_101760042 | 283 |
| 134 | 3300026089 | Ga0207648_10050977 | Ga0207648_100509772 | 283 |
| 135 | 3300026142 | Ga0207698_10048780 | Ga0207698_100487802 | 283 |
| 136 | 3300026142 | Ga0207698_10070806 | Ga0207698_100708063 | 283 |
| 137 | 3300026142 | Ga0207698_10286794 | Ga0207698_102867942 | 283 |
| 138 | 3300026142 | Ga0207698_10620405 | Ga0207698_106204051 | 283 |
| 139 | 3300027907 | Ga0207428_10040539 | Ga0207428_100405393 | 283 |
| 140 | 3300028379 | Ga0268266_10408875 | Ga0268266_104088751 | 283 |
| 141 | 3300031090 | Ga0265760_10004140 | Ga0265760_100041402 | 283 |
| 142 | 3300032002 | Ga0307416_100093893 | Ga0307416_1000938932 | 283 |
| 143 | 3300032002 | Ga0307416_100599973 | Ga0307416_1005999731 | 283 |
| 144 | 3300036401 | Ga0373937_0127606 | Ga0373937_0127606_477_1328 | 283 |
| 145 | 3300037312 | Ga0395899_0125992 | Ga0395899_0125992_424_1284 | 283 |
| 146 | 3300037471 | Ga0395905_0223189 | Ga0395905_0223189_328_1188 | 283 |
| 147 | 3300041486 | Ga0451807_0506872 | Ga0451807_0506872_147_998 | 283 |
| 148 | 3300042876 | Ga0451577_0090455 | Ga0451577_0090455_1572_2426 | 283 |
| 149 | 3300044684 | Ga0466966_0077460 | Ga0466966_0077460_62_922 | 283 |
| 150 | 3300045836 | Ga0466958_0135923 | Ga0466958_0135923_397_1257 | 283 |
| 151 | 3300045976 | Ga0466967_0548252 | Ga0466967_0548252_250_1110 | 283 |
| 152 | 3300046454 | Ga0495592_0030572 | Ga0495592_0030572_3005_3856 | 283 |
| 153 | 3300046477 | Ga0495664_0221878 | Ga0495664_0221878_206_1057 | 283 |
| 154 | 3300046511 | Ga0495608_0009946 | Ga0495608_0009946_420_1271 | 283 |
| 155 | 3300046516 | Ga0495628_0039774 | Ga0495628_0039774_1070_1921 | 283 |
| 156 | 3300046536 | Ga0495587_0073802 | Ga0495587_0073802_23_874 | 283 |
| 157 | 3300046543 | Ga0495645_0003047 | Ga0495645_0003047_1308_2159 | 283 |
| 158 | 3300046663 | Ga0495635_0009306 | Ga0495635_0009306_5716_6567 | 283 |
| 159 | 3300046678 | Ga0495599_0020404 | Ga0495599_0020404_676_1527 | 283 |
| 160 | 3300046679 | Ga0495623_0016657 | Ga0495623_0016657_832_1683 | 283 |
| 161 | 3300047322 | Ga0495680_0290889 | Ga0495680_0290889_217_1068 | 283 |
| 162 | 3300047471 | Ga0495684_0355685 | Ga0495684_0355685_146_997 | 283 |
| 163 | 3300048907 | Ga0496104_0030033 | Ga0496104_0030033_1397_2248 | 283 |
| 164 | 3300048913 | Ga0496110_0014043 | Ga0496110_0014043_5219_6070 | 283 |
| 165 | 3300049579 | Ga0501043_0055365 | Ga0501043_0055365_121_1041 | 283 |
| 166 | 3300049581 | Ga0501047_0040071 | Ga0501047_0040071_745_1632 | 283 |
| 167 | 3300049585 | Ga0501069_0027871 | Ga0501069_0027871_999_1886 | 283 |
| 168 | 3300049586 | Ga0501070_0011066 | Ga0501070_0011066_1308_2195 | 283 |
| 169 | 3300049589 | Ga0501073_0016909 | Ga0501073_0016909_2459_3346 | 283 |
| 170 | 3300049590 | Ga0501074_0000803 | Ga0501074_0000803_17696_18583 | 283 |
| 171 | 3300049741 | Ga0501079_0254214 | Ga0501079_0254214_118_1005 | 283 |
| 172 | 3300050493 | nmdc:mga0k408_114627_c1 | nmdc:mga0k408_114627_c1_30_881 | 283 |
| 173 | 3300050511 | nmdc:mga08y16_40705_c1 | nmdc:mga08y16_40705_c1_3217_4068 | 283 |
| 174 | 3300053077 | Ga0495601_0001183 | Ga0495601_0001183_456_1307 | 283 |
| 175 | 3300053084 | Ga0495595_0084545 | Ga0495595_0084545_648_1499 | 283 |
| 176 | 3300053085 | Ga0495619_0012970 | Ga0495619_0012970_686_1537 | 283 |
| 177 | 3300054114 | Ga0501084_0104473 | Ga0501084_0104473_749_1636 | 283 |
| 178 | 3300060353 | Ga0501082_0139876 | Ga0501082_0139876_57_944 | 283 |
| 179 | iso_pu_bacteria | 2980182181 | 2980185337 | 283 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3tqv-assembly1.cif.gz_B | structure of the nicotinate-nucleotide pyrophosphorylase from francisella tularensis. | 0.9646 | 9 | 281 |
| 3tqv-assembly1.cif.gz_A | structure of the nicotinate-nucleotide pyrophosphorylase from francisella tularensis. | 0.9613 | 9 | 281 |
| 5huo-assembly1.cif.gz_E-3 | crystal structure of nadc deletion mutant in c2221 space group | 0.9612 | 16 | 283 |
| 5hul-assembly1.cif.gz_B | crystal structure of nadc deletion mutant in cubic space group | 0.9588 | 16 | 283 |
| 5hul-assembly1.cif.gz_A | crystal structure of nadc deletion mutant in cubic space group | 0.9587 | 16 | 283 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P30011_23_142_3.10.310.10 | Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 | 0.9786 | 16 | 123 | 3.10.310.10 |
| af_A0A1D6EUR3_65_193_3.90.1170.20 | Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain | 0.9766 | 16 | 123 | 3.90.1170.20 |
| af_P30011_23_129_3.90.1170.20 | Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain | 0.9754 | 16 | 109 | 3.90.1170.20 |
| 3tqvB01 | Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain | 0.9732 | 9 | 110 | 3.90.1170.20 |
| af_P30011_147_280_3.90.1170.20 | Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain | 0.9727 | 131 | 264 | 3.90.1170.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7V9IY12-F1-model_v4 | Nicotinate-nucleotide diphosphorylase (Carboxylating) | 0.997 | 199 | 277 |
GO:0004514
GO:0005737 GO:0009435 GO:0034213 |
| AF-A0A7Y2VI67-F1-model_v4 | Nicotinate-nucleotide diphosphorylase (EC 2.4.2.19) | 0.9957 | 12 | 118 |
GO:0004514
GO:0005737 GO:0009435 GO:0034213 |
| AF-A0A0X8GJC6-F1-model_v4 | nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) | 0.9927 | 9 | 281 |
GO:0004514
GO:0005737 GO:0009435 GO:0034213 |
| AF-A0A418RN63-F1-model_v4 | nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) | 0.9916 | 16 | 281 |
GO:0004514
GO:0005737 GO:0009435 GO:0034213 |
| AF-A0A1H3NCU6-F1-model_v4 | nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) | 0.9888 | 5 | 283 |
GO:0004514
GO:0005737 GO:0009435 GO:0034213 |
Predicted Structure (AlphaFold2)
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