F273571

General Info

Members Datasets Scaffolds Average Seq Length
179 139 358 471

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10001163|Ga0081538_1000116318
Length 548
Sequence MGPTVARQRLAAPGRSSSRLERLPRLEGVPTASPTPDPARTGSTASPPADRLVVGFDLDMTLIDSRPGIKATYDAIAAETGVAIDSDLVVSRLGPPVEVEMAEWFPPERVDALADRYRELYPEYAIAATQALPGVAEALAAVRAHHGRSIVVTAKNTRHAAQHVEHLRLDVDEVLGRLWRDGKAGGLAASGATVYVGDHVHDMEAARRAGATGVGVTTGTSTRQELADAGAAVVLDSLAELPAWLDEHLLAARLETLDAHLRGLGSVLVAYSGGADSAFLLAAAVRALGADRVVAATAYSGSLPRSERGPAAAFAASLGVRQLTPRTHEMERAGYRANAGDRCYFCKSELLEVLAPLAAEHGLAAVATGTNADDARAGFRPGIRAATERGAVTPLRDAGLTKAQVREASRRWGLPTWDKPAAACLSSRIAYGVEVTPHRLARVERAEAALRATLADHGVGVDNLRVRDLDDRARVEVDPSTVADIDGDVTIRSAVLDTVRAAGFAAVEIDPRGFRSGSMNELLSDAERRRHGPGGTGAIEVEPAPTGT

Samples

Sample ID Description Type Environment
1 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
64 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
68 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
74 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
77 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
82 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
83 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
84 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
85 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
86 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
87 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
88 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
91 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
92 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
101 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
102 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
103 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
104 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
105 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
106 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
108 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
109 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
110 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
111 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
112 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
115 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
116 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
117 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
118 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
119 2506783011 Frankia datiscae Dg1 Isolate Nodule
120 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
121 2643221615 Nocardioides sp. Root224 Isolate Unclassified
122 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
123 2643221679 Angustibacter sp. Root456 Isolate Unclassified
124 2671180195 Frankia sp. CcI49 Isolate Nodule
125 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
126 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
127 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
128 2687453737 Frankia sp. BMG5.36 Isolate Nodule
129 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
130 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
131 2773857922 Frankia sp. CcI49 Isolate Nodule
132 2773857933 Frankia sp. BMG5.30 Isolate Nodule
133 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
134 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
135 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
136 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
137 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
138 8002775197 Frankia nepalensis CN7 Isolate Nodule
139 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.27
Metatranscriptomes 0
Isolates 11.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.15
Nodule 5.03
Rhizoplane 10.06
Rhizosphere 73.18
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081538_10001163 3300005981 Bacteria 27775
2 JGI24737J22298_10004102 3300001990 Bacteria 5088
3 JGI24735J21928_10020757 3300002067 Bacteria 2010
4 JGI24738J21930_10001949 3300002075 Bacteria 5564
5 Ga0070683_100070879 3300005329 Bacteria 3252
6 Ga0070683_100152885 3300005329 Bacteria 2188
7 Ga0070692_10000944 3300005345 Bacteria 9873
8 Ga0070668_100045842 3300005347 Bacteria 3354
9 Ga0070674_100022291 3300005356 Bacteria 4082
10 Ga0070700_100000576 3300005441 Bacteria 18364
11 Ga0070708_100305143 3300005445 Bacteria 1499
12 Ga0068867_100010755 3300005459 Bacteria 6454
13 Ga0070685_10018649 3300005466 Bacteria 3735
14 Ga0070698_100003436 3300005471 Bacteria 17413
15 Ga0070672_100009455 3300005543 Bacteria 6720
16 Ga0070686_100107633 3300005544 Bacteria 1894
17 Ga0070696_100002089 3300005546 Bacteria 13123
18 Ga0068852_100003614 3300005616 Bacteria 10823
19 Ga0068859_100001317 3300005617 Bacteria 25325
20 Ga0068859_100001463 3300005617 Bacteria 24026
21 Ga0068861_100012554 3300005719 Bacteria 5909
22 Ga0068870_10009079 3300005840 Bacteria 4502
23 Ga0068863_100002468 3300005841 Bacteria 18375
24 Ga0068858_100048394 3300005842 Bacteria 3940
25 Ga0068860_100001392 3300005843 Bacteria 26214
26 Ga0068862_100000252 3300005844 Bacteria 59906
27 Ga0081455_10000990 3300005937 Bacteria 36059
28 Ga0081455_10096726 3300005937 Bacteria 2380
29 Ga0075365_10001912 3300006038 Bacteria 9819
30 Ga0075365_10010640 3300006038 Bacteria 5372
31 Ga0075365_10091483 3300006038 Bacteria 2073
32 Ga0075365_10119043 3300006038 Bacteria 1820
33 Ga0075364_10014165 3300006051 Bacteria 4922
34 Ga0075428_100017552 3300006844 Bacteria 7906
35 Ga0075428_100043338 3300006844 Bacteria 4946
36 Ga0075428_100045416 3300006844 Bacteria 4826
37 Ga0075430_100016904 3300006846 Bacteria 6213
38 Ga0075431_100066197 3300006847 Bacteria 3730
39 Ga0075431_100133452 3300006847 Bacteria 2560
40 Ga0075429_100043863 3300006880 Bacteria 3890
41 Ga0097620_100001317 3300006931 Bacteria 25325
42 Ga0097620_100001463 3300006931 Bacteria 24026
43 Ga0105245_10016107 3300009098 Bacteria 6514
44 Ga0105245_10025141 3300009098 Bacteria 5237
45 Ga0105245_10036337 3300009098 Bacteria 4376
46 Ga0114129_10053144 3300009147 Bacteria 5682
47 Ga0105243_10035701 3300009148 Bacteria 3854
48 Ga0105243_10064831 3300009148 Bacteria 2933
49 Ga0105248_10000475 3300009177 Bacteria 45720
50 Ga0105248_10325159 3300009177 Bacteria 1732
51 Ga0157372_10043478 3300013307 Bacteria 4974
52 Ga0157375_10041042 3300013308 Bacteria 4466
53 Ga0163163_10021895 3300014325 Bacteria 6041
54 Ga0213876_10017831 3300021384 Bacteria 3745
55 Ga0207647_10018049 3300025904 Bacteria 4782
56 Ga0207643_10002499 3300025908 Bacteria 9936
57 Ga0207687_10016820 3300025927 Bacteria 4808
58 Ga0207687_10181574 3300025927 Bacteria 1631
59 Ga0207709_10048772 3300025935 Bacteria 2582
60 Ga0207670_10093408 3300025936 Bacteria 2131
61 Ga0207691_10001086 3300025940 Bacteria 27053
62 Ga0207711_10000403 3300025941 Bacteria 45691
63 Ga0207661_10221152 3300025944 Bacteria 1674
64 Ga0207679_10031501 3300025945 Bacteria 3712
65 Ga0207640_10003981 3300025981 Bacteria 7978
66 Ga0207703_10024064 3300026035 Bacteria 4791
67 Ga0207639_10047293 3300026041 Bacteria 3251
68 Ga0207708_10000420 3300026075 Bacteria 33209
69 Ga0207641_10002900 3300026088 Bacteria 15517
70 Ga0207648_10016651 3300026089 Bacteria 6709
71 Ga0207675_100001769 3300026118 Bacteria 21595
72 Ga0207675_100056117 3300026118 Bacteria 3674
73 Ga0268265_10000244 3300028380 Bacteria 62050
74 Ga0268264_10000560 3300028381 Bacteria 45822
75 Ga0307515_10038151 3300028794 Bacteria 7696
76 Ga0265338_10007675 3300028800 Bacteria 13298
77 Ga0265332_10032016 3300031238 Bacteria 2293
78 Ga0265325_10004327 3300031241 Bacteria 8993
79 Ga0265340_10003045 3300031247 Bacteria 9533
80 Ga0265339_10046145 3300031249 Bacteria 2396
81 Ga0265316_10023777 3300031344 Bacteria 5145
82 Ga0265314_10020018 3300031711 Bacteria 5172
83 Ga0265342_10014749 3300031712 Bacteria 5175
84 Ga0307410_10017084 3300031852 Bacteria 4347
85 Ga0307411_10016275 3300032005 Bacteria 4207
86 Ga0307415_100045489 3300032126 Bacteria 2943
87 Ga0395899_0006148 3300037312 Bacteria 9308
88 Ga0395901_0026169 3300038443 Bacteria 5990
89 Ga0436365_1003520 3300039437 Bacteria 17783
90 Ga0466972_0044612 3300044658 Bacteria 2150
91 Ga0466966_0014316 3300044684 Bacteria 5252
92 Ga0466966_0060893 3300044684 Bacteria 2382
93 Ga0466961_0114486 3300044693 Bacteria 1695
94 Ga0466971_0026930 3300044719 Bacteria 2573
95 Ga0466957_0052829 3300044842 Bacteria 2475
96 Ga0466957_0058340 3300044842 Bacteria 2365
97 Ga0466957_0073088 3300044842 Bacteria 2124
98 Ga0466960_0000839 3300044901 Bacteria 10852
99 Ga0466960_0011552 3300044901 Bacteria 3699
100 Ga0466967_0017723 3300045976 Bacteria 5666
101 Ga0496100_0025064 3300048903 Bacteria 3644
102 Ga0496102_0091303 3300048905 Bacteria 2819
103 Ga0496105_0181558 3300048908 Bacteria 1723
104 Ga0496107_0117212 3300048910 Bacteria 1961
105 Ga0496108_0053727 3300048911 Bacteria 3379
106 Ga0496108_0114848 3300048911 Bacteria 2305
107 Ga0496108_0175416 3300048911 Bacteria 1855
108 Ga0496109_0077585 3300048912 Bacteria 3057
109 Ga0496110_0060198 3300048913 Bacteria 3348
110 Ga0496110_0067455 3300048913 Bacteria 3166
111 Ga0496110_0171674 3300048913 Bacteria 1967
112 Ga0496112_0054947 3300048915 Bacteria 3913
113 Ga0496114_0024421 3300048917 Bacteria 4934
114 Ga0496114_0046449 3300048917 Bacteria 3609
115 Ga0496114_0054681 3300048917 Bacteria 3329
116 Ga0496114_0076628 3300048917 Bacteria 2818
117 Ga0496114_0235488 3300048917 Bacteria 1609
118 Ga0496115_0006545 3300048918 Bacteria 8541
119 Ga0496118_0011256 3300048921 Bacteria 8754
120 Ga0501032_0115270 3300049569 Bacteria 1777
121 Ga0501033_0004425 3300049570 Bacteria 11243
122 Ga0501036_0043660 3300049572 Bacteria 3797
123 Ga0501037_0083981 3300049573 Bacteria 2307
124 Ga0501038_0013593 3300049574 Bacteria 7417
125 Ga0501038_0025849 3300049574 Bacteria 5230
126 Ga0501038_0041872 3300049574 Bacteria 3992
127 Ga0501039_0015389 3300049575 Bacteria 5856
128 Ga0501039_0031284 3300049575 Bacteria 4102
129 Ga0501039_0100343 3300049575 Bacteria 2259
130 Ga0501046_0000982 3300049580 Bacteria 27848
131 Ga0501046_0103875 3300049580 Bacteria 2178
132 Ga0501047_0210184 3300049581 Bacteria 1804
133 Ga0501067_0007282 3300049583 Bacteria 6143
134 Ga0501067_0015554 3300049583 Bacteria 4212
135 Ga0501070_0064562 3300049586 Bacteria 3031
136 Ga0501071_0035426 3300049587 Bacteria 3555
137 Ga0501072_0008871 3300049588 Bacteria 7639
138 Ga0501072_0029948 3300049588 Bacteria 4253
139 Ga0501074_0022028 3300049590 Bacteria 4629
140 Ga0501075_0136269 3300049591 Bacteria 1870
141 Ga0501035_0058045 3300049822 Bacteria 3449
142 Ga0501035_0191428 3300049822 Bacteria 1758
143 Ga0501035_0223927 3300049822 Bacteria 1605
144 nmdc:mga00v17_6738_c1 3300050491 Bacteria 6103
145 nmdc:mga0yw44_16782_c1 3300050492 Bacteria 3966
146 nmdc:mga0yw44_3437_c1 3300050492 Bacteria 6693
147 nmdc:mga05p37_519_c1 3300050507 Bacteria 42633
148 nmdc:mga09592_2108_c1 3300050508 Bacteria 16065
149 nmdc:mga0qj67_13138_c1 3300050509 Bacteria 6252
150 nmdc:mga06r32_153196_c1 3300050510 Bacteria 2285
151 nmdc:mga06r32_2528_c1 3300050510 Bacteria 16360
152 nmdc:mga06r32_35390_c1 3300050510 Bacteria 4712
153 nmdc:mga08y16_2013_c1 3300050511 Bacteria 20785
154 Ga0500644_0000276 3300053088 Bacteria 28535
155 Ga0500556_0000599 3300053104 Bacteria 23426
156 Ga0500593_001166 3300053117 Bacteria 9480
157 Ga0501084_0094720 3300054114 Bacteria 2507
158 Ga0530510_0070199 3300061734 Bacteria 2543
159 2506864702 2506783011 Bacteria 5323186
160 2515856235 2515154155 Bacteria 7985436
161 2644091052 2643221615 Bacteria 5487866
162 2644320855 2643221657 Bacteria 5490246
163 2644446680 2643221679 Bacteria 3839507
164 2671836870 2671180195 Bacteria 9757215
165 2676200677 2675902999 Bacteria 9438463
166 2676478769 2675903058 Bacteria 6822861
167 2686537307 2684623035 Bacteria 8032739
168 2689963172 2687453737 Bacteria 11203906
169 2689996050 2687453743 Bacteria 8361025
170 2774845255 2773857921 Bacteria 9435764
171 2774855026 2773857922 Bacteria 9757215
172 2774905811 2773857933 Bacteria 5818019
173 2816420908 2816332119 Bacteria 8120218
174 2827628650 2827628540 Bacteria 6858585
175 2857485859 2857481737 Bacteria 4761446
176 2861525178 2861520306 Bacteria 8348283
177 2895887937 2895880812 Bacteria 11255272
178 8002782325 8002775197 Bacteria 10728764
179 8057573928 8057568493 Bacteria 7221719
180 Ga0081538_10001163
181 JGI24737J22298_10004102
182 JGI24735J21928_10020757
183 JGI24738J21930_10001949
184 Ga0070683_100070879
185 Ga0070683_100152885
186 Ga0070692_10000944
187 Ga0070668_100045842
188 Ga0070674_100022291
189 Ga0070700_100000576
190 Ga0070708_100305143
191 Ga0068867_100010755
192 Ga0070685_10018649
193 Ga0070698_100003436
194 Ga0070672_100009455
195 Ga0070686_100107633
196 Ga0070696_100002089
197 Ga0068852_100003614
198 Ga0068859_100001317
199 Ga0068859_100001463
200 Ga0068861_100012554
201 Ga0068870_10009079
202 Ga0068863_100002468
203 Ga0068858_100048394
204 Ga0068860_100001392
205 Ga0068862_100000252
206 Ga0081455_10000990
207 Ga0081455_10096726
208 Ga0075365_10001912
209 Ga0075365_10010640
210 Ga0075365_10091483
211 Ga0075365_10119043
212 Ga0075364_10014165
213 Ga0075428_100017552
214 Ga0075428_100043338
215 Ga0075428_100045416
216 Ga0075430_100016904
217 Ga0075431_100066197
218 Ga0075431_100133452
219 Ga0075429_100043863
220 Ga0097620_100001317
221 Ga0097620_100001463
222 Ga0105245_10016107
223 Ga0105245_10025141
224 Ga0105245_10036337
225 Ga0114129_10053144
226 Ga0105243_10035701
227 Ga0105243_10064831
228 Ga0105248_10000475
229 Ga0105248_10325159
230 Ga0157372_10043478
231 Ga0157375_10041042
232 Ga0163163_10021895
233 Ga0213876_10017831
234 Ga0207647_10018049
235 Ga0207643_10002499
236 Ga0207687_10016820
237 Ga0207687_10181574
238 Ga0207709_10048772
239 Ga0207670_10093408
240 Ga0207691_10001086
241 Ga0207711_10000403
242 Ga0207661_10221152
243 Ga0207679_10031501
244 Ga0207640_10003981
245 Ga0207703_10024064
246 Ga0207639_10047293
247 Ga0207708_10000420
248 Ga0207641_10002900
249 Ga0207648_10016651
250 Ga0207675_100001769
251 Ga0207675_100056117
252 Ga0268265_10000244
253 Ga0268264_10000560
254 Ga0307515_10038151
255 Ga0265338_10007675
256 Ga0265332_10032016
257 Ga0265325_10004327
258 Ga0265340_10003045
259 Ga0265339_10046145
260 Ga0265316_10023777
261 Ga0265314_10020018
262 Ga0265342_10014749
263 Ga0307410_10017084
264 Ga0307411_10016275
265 Ga0307415_100045489
266 Ga0395899_0006148
267 Ga0395901_0026169
268 Ga0436365_1003520
269 Ga0466972_0044612
270 Ga0466966_0014316
271 Ga0466966_0060893
272 Ga0466961_0114486
273 Ga0466971_0026930
274 Ga0466957_0052829
275 Ga0466957_0058340
276 Ga0466957_0073088
277 Ga0466960_0000839
278 Ga0466960_0011552
279 Ga0466967_0017723
280 Ga0496100_0025064
281 Ga0496102_0091303
282 Ga0496105_0181558
283 Ga0496107_0117212
284 Ga0496108_0053727
285 Ga0496108_0114848
286 Ga0496108_0175416
287 Ga0496109_0077585
288 Ga0496110_0060198
289 Ga0496110_0067455
290 Ga0496110_0171674
291 Ga0496112_0054947
292 Ga0496114_0024421
293 Ga0496114_0046449
294 Ga0496114_0054681
295 Ga0496114_0076628
296 Ga0496114_0235488
297 Ga0496115_0006545
298 Ga0496118_0011256
299 Ga0501032_0115270
300 Ga0501033_0004425
301 Ga0501036_0043660
302 Ga0501037_0083981
303 Ga0501038_0013593
304 Ga0501038_0025849
305 Ga0501038_0041872
306 Ga0501039_0015389
307 Ga0501039_0031284
308 Ga0501039_0100343
309 Ga0501046_0000982
310 Ga0501046_0103875
311 Ga0501047_0210184
312 Ga0501067_0007282
313 Ga0501067_0015554
314 Ga0501070_0064562
315 Ga0501071_0035426
316 Ga0501072_0008871
317 Ga0501072_0029948
318 Ga0501074_0022028
319 Ga0501075_0136269
320 Ga0501035_0058045
321 Ga0501035_0191428
322 Ga0501035_0223927
323 nmdc:mga00v17_6738_c1
324 nmdc:mga0yw44_16782_c1
325 nmdc:mga0yw44_3437_c1
326 nmdc:mga05p37_519_c1
327 nmdc:mga09592_2108_c1
328 nmdc:mga0qj67_13138_c1
329 nmdc:mga06r32_153196_c1
330 nmdc:mga06r32_2528_c1
331 nmdc:mga06r32_35390_c1
332 nmdc:mga08y16_2013_c1
333 Ga0500644_0000276
334 Ga0500556_0000599
335 Ga0500593_001166
336 Ga0501084_0094720
337 Ga0530510_0070199
338 2506864702
339 2515856235
340 2644091052
341 2644320855
342 2644446680
343 2671836870
344 2676200677
345 2676478769
346 2686537307
347 2689963172
348 2689996050
349 2774845255
350 2774855026
351 2774905811
352 2816420908
353 2827628650
354 2857485859
355 2861525178
356 2895887937
357 8002782325
358 8057573928

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13419

HAD_2

Haloacid dehalogenase-like hydrolase

54

176

0.97

PF13242

Hydrolase_like

HAD-hyrolase-like

162

241

0.88

PF12710

HAD

haloacid dehalogenase-like hydrolase

54

207

0.84

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

52

210

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3sd7-assembly1.cif.gz_A 1.7 angstrom resolution crystal structure of putative phosphatase from clostridium difficile 0.8913 17 188
6utp-assembly1.cif.gz_E lare, a sulfur transferase involved in synthesis of the cofactor for lactate racemase in complex with cobalt 0.8619 200 450
6utp-assembly1.cif.gz_E lare, a sulfur transferase involved in synthesis of the cofactor for lactate racemase in complex with cobalt 0.8549 200 450
6utq-assembly1.cif.gz_E lare, a sulfur transferase involved in synthesis of the cofactor for lactate racemase in complex with cadmium 0.8529 193 451
5unm-assembly1.cif.gz_E lare, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, substrate free form with flexible loop 0.8527 193 455
ID Description Score Start End Superfamily
af_Q58240_5_163_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8688 196 358 3.40.50.620
af_Q58240_5_163_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8536 196 358 3.40.50.620
af_A0A0R0FX63_12_163_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8166 17 116 3.40.50.1000
4ex7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.804 17 188 3.40.50.1000
2hi0B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8016 16 185 3.40.50.1000
ID Description Score Start End GO Terms
AF-A0A640S8I2-F1-model_v4 Hydrolase 0.9783 54 195 GO:0006281
GO:0008967
AF-Q0RB25-F1-model_v4 Putative hydrolase (Partial) 0.9773 74 195 GO:0016787
AF-A0A6G3XD21-F1-model_v4 HAD family hydrolase 0.974 113 195 GO:0016787
AF-A0A4Q4D5J6-F1-model_v4 HAD family hydrolase 0.9632 60 195 GO:0016787
AF-A0A4Y9N6C8-F1-model_v4 ExsB family transcriptional regulator 0.9541 193 395 GO:0016783

Map