F273561

General Info

Members Datasets Scaffolds Average Seq Length
179 130 358 758

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10002306|Ga0081455_1000230612
Length 886
Sequence MASIDPVCHMTVAEENAAATYQYEGRNYYFCAGGCRDRFAENPEKFLNGQGAPEYSRDFSTHPKTLLKGEELKRIDLPIRGMSCASCVERIETGLSKLEGVKEAVVNFAAEKGTILYDPSRVSVNRIVTEVENIGYGTRTEKITIPVRGMSCASCVEKIETGLSRLPGVTSAAVNFAAERATVSFIPSIQSPSGLRKAIRDIGYEPLEVADQSADYEKEARDREIRELGLKTLVGAVLSIPLLLGMVSKWLPLMPEWLTNHFVQFLLATPIHVWVGWQFHAGFWKALRHKTADMNTLVSLGTNAGYIYSTVVTFAPGFFIGEGIHAGVYFETVAILHTLIILGRFFEARAKGRTSEAIKKLMGLQAKTARIVHDGREIDIPVEDVQVGDVVVVRPGEKLPVDGVVEQGSSAVDESMLTGESLPVEKLPGSDVYGGTLNKTGSFHFKATKVGKETALAQIIKLVEAAQGSKPPIQRTADKIAGIFVPIVIAIALLSFGVWYFFGPQPSLIFALANFMAVLLIACPCAIGLAAPTAVMVGIGKGTEHGILFRGAEALEVASKLTTVVLDKTGTLTKGEPSVTDVVTANGFHEKDIFYYAASAEKGSEHPLGEAIVRRASDEGLEIEGVDSFNAIPGHGIEAKLAERDLLLGNLKLMSDRGVALDGLQKQAEQLADKGKTPMFVAVDGKPAGIIAVADTLKPNSKQAVKALHALGLEVAMITGDNQRTAHAIAKQLGIDRVMAEVLPQAKAEEVKRLQAERKGVAMVGDGINDAPALAQADVGIAIGTGTDVAIEASDITLISGDLRGIITSIALSKRTMRTMKQNFFWAFIYNTVLIPVAAGILYPVAGILMSPIFAGAAMAFSSVSVVSNSLRLRTFRPRLAAAGSE

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
67 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
68 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
74 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
75 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
76 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
77 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
78 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
79 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
82 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
94 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
101 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
102 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
103 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
115 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
116 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
117 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
118 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
119 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
120 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
124 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
129 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
130 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.44
Metatranscriptomes 0
Isolates 0.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.56
Nodule 0
Rhizoplane 1.68
Rhizosphere 97.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10002306 3300005937 Bacteria 22741
2 Ga0070658_10014424 3300005327 Bacteria 6341
3 Ga0070683_100009166 3300005329 Bacteria 8447
4 Ga0070683_100013608 3300005329 Bacteria 7100
5 Ga0070683_100045059 3300005329 Bacteria 4071
6 Ga0070690_100023560 3300005330 Bacteria 3776
7 Ga0070670_100003421 3300005331 Bacteria 13169
8 Ga0070670_100026730 3300005331 Bacteria 4964
9 Ga0068869_100008528 3300005334 Bacteria 6612
10 Ga0070666_10035300 3300005335 Bacteria 3316
11 Ga0070660_100005246 3300005339 Bacteria 8958
12 Ga0070661_100001379 3300005344 Bacteria 16969
13 Ga0070669_100000002 3300005353 Bacteria 506497
14 Ga0070659_100005309 3300005366 Bacteria 9242
15 Ga0070714_100050908 3300005435 Bacteria 3530
16 Ga0070713_100009223 3300005436 Bacteria 7045
17 Ga0070681_10000370 3300005458 Bacteria 36255
18 Ga0070681_10013683 3300005458 Bacteria 8073
19 Ga0070681_10045671 3300005458 Bacteria 4382
20 Ga0070679_100001296 3300005530 Bacteria 22081
21 Ga0070679_100053249 3300005530 Bacteria 4029
22 Ga0070684_100040393 3300005535 Bacteria 4017
23 Ga0068853_100042260 3300005539 Bacteria 3897
24 Ga0070695_100007505 3300005545 Bacteria 6459
25 Ga0070693_100003178 3300005547 Bacteria 7622
26 Ga0070665_100060666 3300005548 Bacteria 3791
27 Ga0068855_100011704 3300005563 Bacteria 10603
28 Ga0068855_100066944 3300005563 Bacteria 4187
29 Ga0068855_100114492 3300005563 Bacteria 3092
30 Ga0070664_100028175 3300005564 Bacteria 4671
31 Ga0070664_100030915 3300005564 Bacteria 4469
32 Ga0070664_100045663 3300005564 Bacteria 3700
33 Ga0068857_100021486 3300005577 Bacteria 5679
34 Ga0068856_100017136 3300005614 Bacteria 7022
35 Ga0068852_100032598 3300005616 Bacteria 4316
36 Ga0068859_100005445 3300005617 Bacteria 12943
37 Ga0068859_100065063 3300005617 Bacteria 3680
38 Ga0068851_10003740 3300005834 Bacteria 6800
39 Ga0068860_100020010 3300005843 Bacteria 6486
40 Ga0068862_100029945 3300005844 Bacteria 4586
41 Ga0081539_10000206 3300005985 Bacteria 137177
42 Ga0075434_100023584 3300006871 Bacteria 5999
43 Ga0075436_100000147 3300006914 Bacteria 43211
44 Ga0097620_100005445 3300006931 Bacteria 12943
45 Ga0097620_100065064 3300006931 Bacteria 3680
46 Ga0105241_10007951 3300009174 Bacteria 7799
47 Ga0105242_10002302 3300009176 Bacteria 15065
48 Ga0105242_10088240 3300009176 Bacteria 2605
49 Ga0105248_10122102 3300009177 Bacteria 2938
50 Ga0105249_10008440 3300009553 Bacteria 8974
51 Ga0105239_10030503 3300010375 Bacteria 5927
52 Ga0105246_10002525 3300011119 Bacteria 11064
53 Ga0105246_10007250 3300011119 Bacteria 6793
54 Ga0157370_10024012 3300013104 Bacteria 6045
55 Ga0157369_10016980 3300013105 Bacteria 8180
56 Ga0157372_10003856 3300013307 Bacteria 16119
57 Ga0157372_10007269 3300013307 Bacteria 11792
58 Ga0157372_10035329 3300013307 Bacteria 5502
59 Ga0157372_10097001 3300013307 Bacteria 3361
60 Ga0157375_10008291 3300013308 Bacteria 9102
61 Ga0157377_10000439 3300014745 Bacteria 17942
62 Ga0207656_10002070 3300025321 Bacteria 6700
63 Ga0207705_10002386 3300025909 Bacteria 14516
64 Ga0207707_10003831 3300025912 Bacteria 13330
65 Ga0207707_10040996 3300025912 Bacteria 4043
66 Ga0207695_10053868 3300025913 Bacteria 4205
67 Ga0207660_10009139 3300025917 Bacteria 6420
68 Ga0207660_10012723 3300025917 Bacteria 5510
69 Ga0207657_10017804 3300025919 Bacteria 6802
70 Ga0207649_10004762 3300025920 Bacteria 7342
71 Ga0207652_10017645 3300025921 Bacteria 5842
72 Ga0207652_10044690 3300025921 Bacteria 3775
73 Ga0207681_10000009 3300025923 Bacteria 410736
74 Ga0207659_10020813 3300025926 Bacteria 4343
75 Ga0207664_10027099 3300025929 Bacteria 4340
76 Ga0207664_10055300 3300025929 Bacteria 3149
77 Ga0207690_10021199 3300025932 Bacteria 4026
78 Ga0207711_10056419 3300025941 Bacteria 3376
79 Ga0207689_10006198 3300025942 Bacteria 10594
80 Ga0207661_10004846 3300025944 Bacteria 9427
81 Ga0207661_10045302 3300025944 Bacteria 3481
82 Ga0207679_10007042 3300025945 Bacteria 7129
83 Ga0207667_10067547 3300025949 Bacteria 3724
84 Ga0207667_10088417 3300025949 Bacteria 3204
85 Ga0207667_10105121 3300025949 Bacteria 2913
86 Ga0207678_10016886 3300026067 Bacteria 6410
87 Ga0207676_10004312 3300026095 Bacteria 10058
88 Ga0207674_10003478 3300026116 Bacteria 19242
89 Ga0207674_10005695 3300026116 Bacteria 14776
90 Ga0207698_10035015 3300026142 Bacteria 3668
91 Ga0265316_10001968 3300031344 Bacteria 21606
92 Ga0265316_10006240 3300031344 Bacteria 11427
93 Ga0316575_10000298 3300031665 Bacteria 13855
94 Ga0316579_10017010 3300031691 Bacteria 3185
95 Ga0307410_10000803 3300031852 Bacteria 13296
96 Ga0307410_10007602 3300031852 Bacteria 5946
97 Ga0307407_10043840 3300031903 Bacteria 2517
98 Ga0307409_100004697 3300031995 Bacteria 7730
99 Ga0307415_100004500 3300032126 Bacteria 7244
100 Ga0373929_0000008 3300035085 Bacteria 298561
101 Ga0373941_0004514 3300035115 Bacteria 3221
102 Ga0373956_0002021 3300035119 Bacteria 8408
103 Ga0373955_0008493 3300035172 Bacteria 4773
104 Ga0373942_0003858 3300035207 Bacteria 3507
105 Ga0373961_0000732 3300035241 Bacteria 11394
106 Ga0316574_0000020 3300035398 Bacteria 40496
107 Ga0373937_0019603 3300036401 Bacteria 6054
108 Ga0316582_0001801 3300036647 Bacteria 9676
109 Ga0316584_0013117 3300036712 Bacteria 5857
110 Ga0395900_0051846 3300037418 Bacteria 4225
111 Ga0395905_0009739 3300037471 Bacteria 9374
112 Ga0451577_0014886 3300042876 Bacteria 7248
113 Ga0453683_0000486 3300044673 Bacteria 45558
114 Ga0453683_0004244 3300044673 Bacteria 10232
115 Ga0453684_0000938 3300044712 Bacteria 96368
116 Ga0453684_0001902 3300044712 Bacteria 54192
117 Ga0453684_0003243 3300044712 Bacteria 37211
118 Ga0453684_0026133 3300044712 Bacteria 8449
119 Ga0453684_0030491 3300044712 Bacteria 7617
120 Ga0453684_0087490 3300044712 Bacteria 3861
121 Ga0451576_0000031 3300045051 Bacteria 399742
122 Ga0451576_0015206 3300045051 Bacteria 8536
123 Ga0466967_0018945 3300045976 Bacteria 5521
124 Ga0495592_0018553 3300046454 Bacteria 5293
125 Ga0495629_0023006 3300046459 Bacteria 4442
126 Ga0495629_0033166 3300046459 Bacteria 3654
127 Ga0495629_0057395 3300046459 Bacteria 2722
128 Ga0495608_0005649 3300046511 Bacteria 8926
129 Ga0495628_0050111 3300046516 Bacteria 3304
130 Ga0495652_0040456 3300046529 Bacteria 4029
131 Ga0495587_0013263 3300046536 Bacteria 5181
132 Ga0495645_0000880 3300046543 Bacteria 20477
133 Ga0495645_0002585 3300046543 Bacteria 12302
134 Ga0495667_0006911 3300046559 Bacteria 7696
135 Ga0495635_0003137 3300046663 Bacteria 11373
136 Ga0495657_0002745 3300046675 Bacteria 14684
137 Ga0495599_0002033 3300046678 Bacteria 11711
138 Ga0495599_0003784 3300046678 Bacteria 8886
139 Ga0495623_0005631 3300046679 Bacteria 8175
140 Ga0495623_0028037 3300046679 Bacteria 3625
141 Ga0495646_0001512 3300046680 Bacteria 13855
142 Ga0495600_0003168 3300046809 Bacteria 9629
143 Ga0495600_0007997 3300046809 Bacteria 6481
144 Ga0495581_0017508 3300047315 Bacteria 4163
145 Ga0495674_0014541 3300047319 Bacteria 7364
146 Ga0495674_0043338 3300047319 Bacteria 4005
147 Ga0495680_0024989 3300047322 Bacteria 4947
148 Ga0496112_0019248 3300048915 Bacteria 6439
149 Ga0496112_0034206 3300048915 Bacteria 4944
150 Ga0496113_0010136 3300048916 Bacteria 6219
151 Ga0501034_0001104 3300049571 Bacteria 37937
152 Ga0501034_0116872 3300049571 Bacteria 2655
153 Ga0501040_0025542 3300049576 Bacteria 3972
154 Ga0501043_0068420 3300049579 Bacteria 2788
155 Ga0501067_0000685 3300049583 Bacteria 18225
156 Ga0501067_0004341 3300049583 Bacteria 7807
157 Ga0501068_0000281 3300049584 Bacteria 25232
158 Ga0501068_0007175 3300049584 Bacteria 6172
159 Ga0501069_0000664 3300049585 Bacteria 15982
160 Ga0501069_0000716 3300049585 Bacteria 15459
161 Ga0501070_0001635 3300049586 Bacteria 19872
162 Ga0501071_0000761 3300049587 Bacteria 17096
163 Ga0501071_0067946 3300049587 Bacteria 2593
164 Ga0501072_0002220 3300049588 Bacteria 14508
165 Ga0501073_0013327 3300049589 Bacteria 5985
166 Ga0501074_0001808 3300049590 Bacteria 14633
167 Ga0501074_0007983 3300049590 Bacteria 7663
168 Ga0501076_0067455 3300049592 Bacteria 2857
169 Ga0501080_0000449 3300049742 Bacteria 32008
170 Ga0501083_0002549 3300049744 Bacteria 12517
171 nmdc:mga0qj67_9095_c1 3300050509 Bacteria 7372
172 nmdc:mga08x19_58_c1 3300050514 Bacteria 118064
173 nmdc:mga0a205_85630_c1 3300050515 Bacteria 3043
174 Ga0495612_0002092 3300053078 Bacteria 8205
175 Ga0500616_0000226 3300053153 Bacteria 88101
176 Ga0501084_0002126 3300054114 Bacteria 15848
177 Ga0501084_0006121 3300054114 Bacteria 9891
178 Ga0501082_0000932 3300060353 Bacteria 25884
179 2925331532 2925326138 Bacteria 9652120
180 Ga0081455_10002306
181 Ga0070658_10014424
182 Ga0070683_100009166
183 Ga0070683_100013608
184 Ga0070683_100045059
185 Ga0070690_100023560
186 Ga0070670_100003421
187 Ga0070670_100026730
188 Ga0068869_100008528
189 Ga0070666_10035300
190 Ga0070660_100005246
191 Ga0070661_100001379
192 Ga0070669_100000002
193 Ga0070659_100005309
194 Ga0070714_100050908
195 Ga0070713_100009223
196 Ga0070681_10000370
197 Ga0070681_10013683
198 Ga0070681_10045671
199 Ga0070679_100001296
200 Ga0070679_100053249
201 Ga0070684_100040393
202 Ga0068853_100042260
203 Ga0070695_100007505
204 Ga0070693_100003178
205 Ga0070665_100060666
206 Ga0068855_100011704
207 Ga0068855_100066944
208 Ga0068855_100114492
209 Ga0070664_100028175
210 Ga0070664_100030915
211 Ga0070664_100045663
212 Ga0068857_100021486
213 Ga0068856_100017136
214 Ga0068852_100032598
215 Ga0068859_100005445
216 Ga0068859_100065063
217 Ga0068851_10003740
218 Ga0068860_100020010
219 Ga0068862_100029945
220 Ga0081539_10000206
221 Ga0075434_100023584
222 Ga0075436_100000147
223 Ga0097620_100005445
224 Ga0097620_100065064
225 Ga0105241_10007951
226 Ga0105242_10002302
227 Ga0105242_10088240
228 Ga0105248_10122102
229 Ga0105249_10008440
230 Ga0105239_10030503
231 Ga0105246_10002525
232 Ga0105246_10007250
233 Ga0157370_10024012
234 Ga0157369_10016980
235 Ga0157372_10003856
236 Ga0157372_10007269
237 Ga0157372_10035329
238 Ga0157372_10097001
239 Ga0157375_10008291
240 Ga0157377_10000439
241 Ga0207656_10002070
242 Ga0207705_10002386
243 Ga0207707_10003831
244 Ga0207707_10040996
245 Ga0207695_10053868
246 Ga0207660_10009139
247 Ga0207660_10012723
248 Ga0207657_10017804
249 Ga0207649_10004762
250 Ga0207652_10017645
251 Ga0207652_10044690
252 Ga0207681_10000009
253 Ga0207659_10020813
254 Ga0207664_10027099
255 Ga0207664_10055300
256 Ga0207690_10021199
257 Ga0207711_10056419
258 Ga0207689_10006198
259 Ga0207661_10004846
260 Ga0207661_10045302
261 Ga0207679_10007042
262 Ga0207667_10067547
263 Ga0207667_10088417
264 Ga0207667_10105121
265 Ga0207678_10016886
266 Ga0207676_10004312
267 Ga0207674_10003478
268 Ga0207674_10005695
269 Ga0207698_10035015
270 Ga0265316_10001968
271 Ga0265316_10006240
272 Ga0316575_10000298
273 Ga0316579_10017010
274 Ga0307410_10000803
275 Ga0307410_10007602
276 Ga0307407_10043840
277 Ga0307409_100004697
278 Ga0307415_100004500
279 Ga0373929_0000008
280 Ga0373941_0004514
281 Ga0373956_0002021
282 Ga0373955_0008493
283 Ga0373942_0003858
284 Ga0373961_0000732
285 Ga0316574_0000020
286 Ga0373937_0019603
287 Ga0316582_0001801
288 Ga0316584_0013117
289 Ga0395900_0051846
290 Ga0395905_0009739
291 Ga0451577_0014886
292 Ga0453683_0000486
293 Ga0453683_0004244
294 Ga0453684_0000938
295 Ga0453684_0001902
296 Ga0453684_0003243
297 Ga0453684_0026133
298 Ga0453684_0030491
299 Ga0453684_0087490
300 Ga0451576_0000031
301 Ga0451576_0015206
302 Ga0466967_0018945
303 Ga0495592_0018553
304 Ga0495629_0023006
305 Ga0495629_0033166
306 Ga0495629_0057395
307 Ga0495608_0005649
308 Ga0495628_0050111
309 Ga0495652_0040456
310 Ga0495587_0013263
311 Ga0495645_0000880
312 Ga0495645_0002585
313 Ga0495667_0006911
314 Ga0495635_0003137
315 Ga0495657_0002745
316 Ga0495599_0002033
317 Ga0495599_0003784
318 Ga0495623_0005631
319 Ga0495623_0028037
320 Ga0495646_0001512
321 Ga0495600_0003168
322 Ga0495600_0007997
323 Ga0495581_0017508
324 Ga0495674_0014541
325 Ga0495674_0043338
326 Ga0495680_0024989
327 Ga0496112_0019248
328 Ga0496112_0034206
329 Ga0496113_0010136
330 Ga0501034_0001104
331 Ga0501034_0116872
332 Ga0501040_0025542
333 Ga0501043_0068420
334 Ga0501067_0000685
335 Ga0501067_0004341
336 Ga0501068_0000281
337 Ga0501068_0007175
338 Ga0501069_0000664
339 Ga0501069_0000716
340 Ga0501070_0001635
341 Ga0501071_0000761
342 Ga0501071_0067946
343 Ga0501072_0002220
344 Ga0501073_0013327
345 Ga0501074_0001808
346 Ga0501074_0007983
347 Ga0501076_0067455
348 Ga0501080_0000449
349 Ga0501083_0002549
350 nmdc:mga0qj67_9095_c1
351 nmdc:mga08x19_58_c1
352 nmdc:mga0a205_85630_c1
353 Ga0495612_0002092
354 Ga0500616_0000226
355 Ga0501084_0002126
356 Ga0501084_0006121
357 Ga0501082_0000932
358 2925331532

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00122

E1-E2_ATPase

E1-E2 ATPase

363

545

0.98

PF00403

HMA

Heavy-metal-associated domain

76

137

0.97

PF04945

YHS

YHS domain

3

50

0.97

PF00403

HMA

Heavy-metal-associated domain

144

205

0.96

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

561

778

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qif-assembly1.cif.gz_A crystal structure of a metallochaperone with a tetranuclear cu(i) cluster 0.9714 8 74
6a71-assembly1.cif.gz_B crystal structure of human atp7b and tm complex 0.9687 8 77
4a48-assembly1.cif.gz_A crosstalk between cu(i) and zn(ii) homeostasis 0.9682 8 76
6ff2-assembly1.cif.gz_B copz metallochaperone 0.9668 8 74
2aw0-assembly1.cif.gz_A fourth metal-binding domain of the menkes copper-transporting atpase, nmr, 20 structures 0.9601 6 77
ID Description Score Start End Superfamily
af_Q54Q77_23_93_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9949 7 74 3.30.70.100
af_Q5AG51_92_157_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9914 11 75 3.30.70.100
af_I1MGV5_128_193_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9914 11 75 3.30.70.100
af_I1JA65_34_107_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9912 7 76 3.30.70.100
af_Q557B5_1074_1224_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9888 583 712 3.40.50.1000
ID Description Score Start End GO Terms
AF-A0A5J6Q157-F1-model_v4 Heavy-metal-associated domain-containing protein 0.9944 8 75 GO:0046872
AF-A0A355B2P8-F1-model_v4 Copper resistance protein CopZ 0.9908 8 74 GO:0046872
AF-A0A7C4L7J0-F1-model_v4 Copper chaperone 0.9887 8 74 GO:0046872
AF-A0A432JR33-F1-model_v4 deleted 0.9832 279 362
AF-A0A2G1CQV9-F1-model_v4 deleted 0.9789 8 74

Map