F272597
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 178 | 145 | 356 | 293 |
Family's Representative Sequence
| Representative Sequence | 3300046559|Ga0495667_0017537|Ga0495667_0017537_3137_4069 |
| Length | 310 |
| Sequence | LRNIIAENAAMELVPFDDRDGWIWWDGALVPWRDAKLHVLTHGLHYASAVFEGERAYAGNVFRLRGHTDRLINSARILGFEIPFSAEQIDAGCNEVLAANGLTDAYLRPIAWRGSEMLAVAAQHTKIHLAIAAWPWPSYFGDDRMTGIRMGMAEWKRPSPETAPTASKATGLYMIGTLSKHRAEQEGYADALMLDWRGRVAETTSANIFFVMDGELHTPTPDCFLDGITRRSVMSLARRQQMKVVERSIEFSEIGRATEVFLAGTAAEVTPVREIAGHRYTPTRITETLLHEYDALVRQSPAEVAKVVAG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 4 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 5 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 6 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 25 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 26 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 27 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 28 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 29 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 31 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 42 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 44 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 45 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 59 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 60 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 61 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 62 | 3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Metagenome | Rhizosphere |
| 63 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 64 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 65 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 66 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 67 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 68 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 69 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 70 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 71 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 72 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 73 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 74 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 75 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 76 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 77 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 78 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 79 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 100 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 101 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 102 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 103 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 104 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 105 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 111 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 128 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 129 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 130 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 131 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 132 | 3300053129 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere | Metagenome | Endosphere |
| 133 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 134 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 135 | 3300053731 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere | Metagenome | Endosphere |
| 136 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 138 | 2508501050 | Microvirga lupini Lut6 | Isolate | Nodule |
| 139 | 2597490356 | Azospirillum brasilense sp7 | Isolate | Unclassified |
| 140 | 2643221583 | Caulobacter sp. Root655 | Isolate | Unclassified |
| 141 | 2775506901 | Microvirga ossetica V5/3m | Isolate | Unclassified |
| 142 | 2842333319 | Skermanella aerolata SEMIA 4010 | Isolate | Nodule |
| 143 | 2846952575 | Azospirillum brasilense sp7 | Isolate | Unclassified |
| 144 | 2848858292 | Azospirillum brasilense Az39 | Isolate | Unclassified |
| 145 | 8002060224 | Methylocystis sp. Sn-Cys | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.38 |
| Metatranscriptomes | 1.12 |
| Isolates | 4.49 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 5.62 |
| Nodule | 1.12 |
| Rhizoplane | 2.25 |
| Rhizosphere | 82.58 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.37 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0495667_0017537 | 3300046559 | Bacteria | 4835 |
| 2 | JGI24740J21852_10014706 | 3300001979 | Bacteria | 2879 |
| 3 | JGI25406J46586_10000138 | 3300003203 | Bacteria | 31765 |
| 4 | JGI25406J46586_10007621 | 3300003203 | Bacteria | 4927 |
| 5 | rootH1_10028776 | 3300003316 | Bacteria | 3207 |
| 6 | Ga0065704_10097656 | 3300005289 | Bacteria | 2384 |
| 7 | Ga0065715_10185478 | 3300005293 | Bacteria | 1448 |
| 8 | Ga0070658_10272136 | 3300005327 | Bacteria | 1441 |
| 9 | Ga0070670_100428452 | 3300005331 | Bacteria | 1170 |
| 10 | Ga0070680_100305893 | 3300005336 | Bacteria | 1348 |
| 11 | Ga0070669_100025474 | 3300005353 | Bacteria | 4249 |
| 12 | Ga0070674_100292622 | 3300005356 | Bacteria | 1295 |
| 13 | Ga0070667_100021677 | 3300005367 | Bacteria | 5332 |
| 14 | Ga0070667_100269335 | 3300005367 | Bacteria | 1527 |
| 15 | Ga0070714_100477224 | 3300005435 | Bacteria | 1187 |
| 16 | Ga0070713_100102268 | 3300005436 | Bacteria | 2484 |
| 17 | Ga0070710_10073510 | 3300005437 | Bacteria | 1977 |
| 18 | Ga0070711_100086588 | 3300005439 | Bacteria | 2247 |
| 19 | Ga0070708_100355647 | 3300005445 | Bacteria | 1380 |
| 20 | Ga0070684_100170287 | 3300005535 | Bacteria | 1978 |
| 21 | Ga0070696_100090970 | 3300005546 | Bacteria | 2172 |
| 22 | Ga0070665_100275429 | 3300005548 | Bacteria | 1685 |
| 23 | Ga0068855_100192912 | 3300005563 | Bacteria | 2296 |
| 24 | Ga0068855_100748795 | 3300005563 | Bacteria | 1042 |
| 25 | Ga0068854_100485572 | 3300005578 | Bacteria | 1038 |
| 26 | Ga0068854_100514120 | 3300005578 | Bacteria | 1010 |
| 27 | Ga0070702_100157629 | 3300005615 | Bacteria | 1464 |
| 28 | Ga0068859_100151553 | 3300005617 | Bacteria | 2394 |
| 29 | Ga0068858_100175454 | 3300005842 | Unclassified | 2022 |
| 30 | Ga0068860_100029748 | 3300005843 | Bacteria | 5255 |
| 31 | Ga0068860_100200596 | 3300005843 | Bacteria | 1933 |
| 32 | Ga0081455_10240444 | 3300005937 | Bacteria | 1331 |
| 33 | Ga0081539_10000008 | 3300005985 | Bacteria | 525071 |
| 34 | Ga0081539_10000240 | 3300005985 | Bacteria | 128629 |
| 35 | Ga0081539_10064185 | 3300005985 | Bacteria | 2000 |
| 36 | Ga0070717_10248378 | 3300006028 | Unclassified | 1571 |
| 37 | Ga0075430_100471044 | 3300006846 | Bacteria | 1037 |
| 38 | Ga0097620_100151544 | 3300006931 | Bacteria | 2394 |
| 39 | Ga0114129_10017466 | 3300009147 | Bacteria | 10215 |
| 40 | Ga0105241_10282508 | 3300009174 | Bacteria | 1418 |
| 41 | Ga0105248_10172090 | 3300009177 | Bacteria | 2441 |
| 42 | Ga0105248_10600097 | 3300009177 | Unclassified | 1242 |
| 43 | Ga0105249_10375324 | 3300009553 | Bacteria | 1447 |
| 44 | Ga0105239_10072079 | 3300010375 | Bacteria | 3796 |
| 45 | Ga0105239_10395845 | 3300010375 | Bacteria | 1563 |
| 46 | Ga0157374_10438509 | 3300013296 | Bacteria | 1306 |
| 47 | Ga0157378_10206921 | 3300013297 | Bacteria | 1859 |
| 48 | Ga0163162_10520899 | 3300013306 | Unclassified | 1318 |
| 49 | Ga0163163_10015426 | 3300014325 | Bacteria | 7065 |
| 50 | Ga0182008_10083680 | 3300014497 | Bacteria | 1571 |
| 51 | Ga0157376_10748057 | 3300014969 | Bacteria | 986 |
| 52 | Ga0213876_10084431 | 3300021384 | Bacteria | 1680 |
| 53 | Ga0224712_10023469 | 3300022467 | Bacteria | 2142 |
| 54 | Ga0224712_10114253 | 3300022467 | Bacteria | 1161 |
| 55 | Ga0207692_10098941 | 3300025898 | Bacteria | 1597 |
| 56 | Ga0207699_10010019 | 3300025906 | Bacteria | 4741 |
| 57 | Ga0207707_10163901 | 3300025912 | Bacteria | 1943 |
| 58 | Ga0207663_10028205 | 3300025916 | Bacteria | 3283 |
| 59 | Ga0207646_10354476 | 3300025922 | Bacteria | 1326 |
| 60 | Ga0207664_10029494 | 3300025929 | Bacteria | 4179 |
| 61 | Ga0207711_10008432 | 3300025941 | Bacteria | 8618 |
| 62 | Ga0207667_10203205 | 3300025949 | Bacteria | 2032 |
| 63 | Ga0207640_10209858 | 3300025981 | Bacteria | 1483 |
| 64 | Ga0207658_10013965 | 3300025986 | Bacteria | 5496 |
| 65 | Ga0207703_10080094 | 3300026035 | Bacteria | 2720 |
| 66 | Ga0207702_10437926 | 3300026078 | Unclassified | 1266 |
| 67 | Ga0268264_10174283 | 3300028381 | Bacteria | 1948 |
| 68 | Ga0265338_10042049 | 3300028800 | Bacteria | 4263 |
| 69 | Ga0265328_10115180 | 3300031239 | Bacteria | 1000 |
| 70 | Ga0307408_100036538 | 3300031548 | Bacteria | 3454 |
| 71 | Ga0307406_10376850 | 3300031901 | Bacteria | 1117 |
| 72 | Ga0373948_0018144 | 3300034817 | Bacteria | 1319 |
| 73 | Ga0373934_0045966 | 3300035086 | Bacteria | 1727 |
| 74 | Ga0373923_0054512 | 3300035111 | Bacteria | 1683 |
| 75 | Ga0373953_0004958 | 3300035117 | Bacteria | 4286 |
| 76 | Ga0373954_0027688 | 3300035118 | Bacteria | 2603 |
| 77 | Ga0373946_0030039 | 3300035171 | Bacteria | 2167 |
| 78 | Ga0373935_0027270 | 3300035692 | Bacteria | 3531 |
| 79 | Ga0373927_0010024 | 3300035695 | Bacteria | 6347 |
| 80 | Ga0373927_0323408 | 3300035695 | Bacteria | 1016 |
| 81 | Ga0373933_0007342 | 3300035724 | Bacteria | 6012 |
| 82 | Ga0373933_0261340 | 3300035724 | Bacteria | 1116 |
| 83 | Ga0373933_0374215 | 3300035724 | Bacteria | 927 |
| 84 | Ga0373937_0006757 | 3300036401 | Bacteria | 9901 |
| 85 | Ga0373937_0032722 | 3300036401 | Bacteria | 4717 |
| 86 | Ga0373925_0056733 | 3300037068 | Bacteria | 2934 |
| 87 | Ga0373925_0088344 | 3300037068 | Bacteria | 2367 |
| 88 | Ga0395905_0000191 | 3300037471 | Bacteria | 97191 |
| 89 | Ga0436364_0844986 | 3300037853 | Bacteria | 4153 |
| 90 | Ga0436364_1226057 | 3300037853 | Bacteria | 5284 |
| 91 | Ga0436365_0759726 | 3300039437 | Bacteria | 3279 |
| 92 | Ga0436365_0820905 | 3300039437 | Bacteria | 1695 |
| 93 | Ga0436360_0293206 | 3300039438 | Bacteria | 4455 |
| 94 | Ga0436360_0871572 | 3300039438 | Bacteria | 6477 |
| 95 | Ga0436360_1197257 | 3300039438 | Bacteria | 1254 |
| 96 | Ga0436360_1274740 | 3300039438 | Bacteria | 2110 |
| 97 | Ga0436363_1587635 | 3300039450 | Bacteria | 1072 |
| 98 | Ga0466963_0179035 | 3300044694 | Bacteria | 1480 |
| 99 | Ga0495629_0244963 | 3300046459 | Bacteria | 1234 |
| 100 | Ga0495664_0002198 | 3300046477 | Bacteria | 10448 |
| 101 | Ga0495664_0273509 | 3300046477 | Unclassified | 1021 |
| 102 | Ga0495608_0009218 | 3300046511 | Bacteria | 6902 |
| 103 | Ga0495618_0083259 | 3300046514 | Bacteria | 2044 |
| 104 | Ga0495628_0079758 | 3300046516 | Bacteria | 2545 |
| 105 | Ga0495630_0322686 | 3300046517 | Bacteria | 1181 |
| 106 | Ga0495652_0051024 | 3300046529 | Bacteria | 3535 |
| 107 | Ga0495640_0010367 | 3300046533 | Bacteria | 7207 |
| 108 | Ga0495640_0332081 | 3300046533 | Bacteria | 940 |
| 109 | Ga0495587_0019034 | 3300046536 | Bacteria | 4254 |
| 110 | Ga0495645_0002174 | 3300046543 | Bacteria | 13327 |
| 111 | Ga0495667_0005381 | 3300046559 | Bacteria | 8656 |
| 112 | Ga0495635_0098276 | 3300046663 | Bacteria | 2001 |
| 113 | Ga0495657_0067456 | 3300046675 | Bacteria | 2348 |
| 114 | Ga0495599_0136375 | 3300046678 | Bacteria | 1523 |
| 115 | Ga0495646_0001534 | 3300046680 | Bacteria | 13777 |
| 116 | Ga0495600_0018136 | 3300046809 | Bacteria | 4482 |
| 117 | Ga0495604_0026606 | 3300047317 | Bacteria | 4604 |
| 118 | Ga0495680_0073408 | 3300047322 | Bacteria | 2600 |
| 119 | Ga0495675_0044504 | 3300047444 | Bacteria | 2828 |
| 120 | Ga0495673_0000346 | 3300047469 | Bacteria | 58325 |
| 121 | Ga0495602_0001212 | 3300048088 | Bacteria | 25377 |
| 122 | Ga0495602_0036151 | 3300048088 | Bacteria | 4600 |
| 123 | Ga0496103_0109726 | 3300048906 | Bacteria | 1752 |
| 124 | Ga0496106_0207066 | 3300048909 | Bacteria | 1562 |
| 125 | Ga0496107_0360608 | 3300048910 | Bacteria | 1081 |
| 126 | Ga0496112_0071526 | 3300048915 | Bacteria | 3428 |
| 127 | Ga0496119_0004188 | 3300048922 | Bacteria | 14494 |
| 128 | Ga0496126_0283975 | 3300048929 | Bacteria | 1370 |
| 129 | Ga0501032_0011709 | 3300049569 | Bacteria | 6287 |
| 130 | Ga0501033_0001001 | 3300049570 | Bacteria | 25710 |
| 131 | Ga0501034_0048922 | 3300049571 | Bacteria | 4266 |
| 132 | Ga0501036_0000878 | 3300049572 | Bacteria | 22422 |
| 133 | Ga0501037_0000705 | 3300049573 | Bacteria | 25426 |
| 134 | Ga0501037_0058450 | 3300049573 | Bacteria | 2814 |
| 135 | Ga0501039_0006168 | 3300049575 | Bacteria | 9103 |
| 136 | Ga0501043_0003068 | 3300049579 | Bacteria | 13880 |
| 137 | Ga0501043_0130816 | 3300049579 | Bacteria | 1967 |
| 138 | Ga0501043_0154830 | 3300049579 | Bacteria | 1793 |
| 139 | Ga0501046_0002293 | 3300049580 | Bacteria | 18042 |
| 140 | Ga0501067_0017008 | 3300049583 | Bacteria | 4018 |
| 141 | Ga0501068_0011321 | 3300049584 | Bacteria | 5032 |
| 142 | Ga0501070_0007455 | 3300049586 | Bacteria | 9293 |
| 143 | Ga0501073_0000889 | 3300049589 | Bacteria | 21423 |
| 144 | Ga0501074_0007778 | 3300049590 | Bacteria | 7759 |
| 145 | Ga0501080_0013325 | 3300049742 | Bacteria | 7557 |
| 146 | Ga0501083_0002329 | 3300049744 | Bacteria | 12985 |
| 147 | Ga0501035_0002094 | 3300049822 | Bacteria | 19858 |
| 148 | Ga0501035_0117886 | 3300049822 | Bacteria | 2323 |
| 149 | Ga0501035_0259016 | 3300049822 | Bacteria | 1475 |
| 150 | Ga0501044_0002567 | 3300049823 | Bacteria | 20676 |
| 151 | Ga0501044_0090148 | 3300049823 | Bacteria | 3094 |
| 152 | nmdc:mga0qj67_489623_c1 | 3300050509 | Bacteria | 989 |
| 153 | Ga0495601_0000719 | 3300053077 | Bacteria | 17776 |
| 154 | Ga0495612_0000161 | 3300053078 | Bacteria | 28312 |
| 155 | Ga0495595_0002624 | 3300053084 | Bacteria | 7049 |
| 156 | Ga0495595_0156703 | 3300053084 | Bacteria | 1122 |
| 157 | Ga0495619_0015944 | 3300053085 | Bacteria | 4757 |
| 158 | Ga0495619_0016270 | 3300053085 | Bacteria | 4708 |
| 159 | Ga0500578_0121038 | 3300053086 | Bacteria | 1645 |
| 160 | Ga0500643_000121 | 3300053087 | Bacteria | 81461 |
| 161 | Ga0500651_0099591 | 3300053093 | Bacteria | 1783 |
| 162 | Ga0500566_0016757 | 3300053094 | Bacteria | 4301 |
| 163 | Ga0500595_000226 | 3300053119 | Bacteria | 38110 |
| 164 | Ga0500595_002128 | 3300053119 | Bacteria | 10092 |
| 165 | Ga0500628_009389 | 3300053129 | Bacteria | 1724 |
| 166 | Ga0500577_0054597 | 3300053142 | Bacteria | 1514 |
| 167 | Ga0500604_0070531 | 3300053151 | Bacteria | 1113 |
| 168 | Ga0500609_001276 | 3300053731 | Bacteria | 3724 |
| 169 | Ga0501084_0000787 | 3300054114 | Bacteria | 24195 |
| 170 | Ga0501082_0007629 | 3300060353 | Bacteria | 9331 |
| 171 | 2508730605 | 2508501050 | Bacteria | 9633614 |
| 172 | 2599106067 | 2597490356 | Bacteria | 7030811 |
| 173 | 2643924330 | 2643221583 | Bacteria | 5218014 |
| 174 | 2776258601 | 2775506901 | Bacteria | 9631051 |
| 175 | 2842340137 | 2842333319 | Bacteria | 8899485 |
| 176 | 2846955861 | 2846952575 | Bacteria | 6587527 |
| 177 | 2848862317 | 2848858292 | Bacteria | 7391279 |
| 178 | 8002061810 | 8002060224 | Bacteria | 4026565 |
| 179 | Ga0495667_0017537 | |||
| 180 | JGI24740J21852_10014706 | |||
| 181 | JGI25406J46586_10000138 | |||
| 182 | JGI25406J46586_10007621 | |||
| 183 | rootH1_10028776 | |||
| 184 | Ga0065704_10097656 | |||
| 185 | Ga0065715_10185478 | |||
| 186 | Ga0070658_10272136 | |||
| 187 | Ga0070670_100428452 | |||
| 188 | Ga0070680_100305893 | |||
| 189 | Ga0070669_100025474 | |||
| 190 | Ga0070674_100292622 | |||
| 191 | Ga0070667_100021677 | |||
| 192 | Ga0070667_100269335 | |||
| 193 | Ga0070714_100477224 | |||
| 194 | Ga0070713_100102268 | |||
| 195 | Ga0070710_10073510 | |||
| 196 | Ga0070711_100086588 | |||
| 197 | Ga0070708_100355647 | |||
| 198 | Ga0070684_100170287 | |||
| 199 | Ga0070696_100090970 | |||
| 200 | Ga0070665_100275429 | |||
| 201 | Ga0068855_100192912 | |||
| 202 | Ga0068855_100748795 | |||
| 203 | Ga0068854_100485572 | |||
| 204 | Ga0068854_100514120 | |||
| 205 | Ga0070702_100157629 | |||
| 206 | Ga0068859_100151553 | |||
| 207 | Ga0068858_100175454 | |||
| 208 | Ga0068860_100029748 | |||
| 209 | Ga0068860_100200596 | |||
| 210 | Ga0081455_10240444 | |||
| 211 | Ga0081539_10000008 | |||
| 212 | Ga0081539_10000240 | |||
| 213 | Ga0081539_10064185 | |||
| 214 | Ga0070717_10248378 | |||
| 215 | Ga0075430_100471044 | |||
| 216 | Ga0097620_100151544 | |||
| 217 | Ga0114129_10017466 | |||
| 218 | Ga0105241_10282508 | |||
| 219 | Ga0105248_10172090 | |||
| 220 | Ga0105248_10600097 | |||
| 221 | Ga0105249_10375324 | |||
| 222 | Ga0105239_10072079 | |||
| 223 | Ga0105239_10395845 | |||
| 224 | Ga0157374_10438509 | |||
| 225 | Ga0157378_10206921 | |||
| 226 | Ga0163162_10520899 | |||
| 227 | Ga0163163_10015426 | |||
| 228 | Ga0182008_10083680 | |||
| 229 | Ga0157376_10748057 | |||
| 230 | Ga0213876_10084431 | |||
| 231 | Ga0224712_10023469 | |||
| 232 | Ga0224712_10114253 | |||
| 233 | Ga0207692_10098941 | |||
| 234 | Ga0207699_10010019 | |||
| 235 | Ga0207707_10163901 | |||
| 236 | Ga0207663_10028205 | |||
| 237 | Ga0207646_10354476 | |||
| 238 | Ga0207664_10029494 | |||
| 239 | Ga0207711_10008432 | |||
| 240 | Ga0207667_10203205 | |||
| 241 | Ga0207640_10209858 | |||
| 242 | Ga0207658_10013965 | |||
| 243 | Ga0207703_10080094 | |||
| 244 | Ga0207702_10437926 | |||
| 245 | Ga0268264_10174283 | |||
| 246 | Ga0265338_10042049 | |||
| 247 | Ga0265328_10115180 | |||
| 248 | Ga0307408_100036538 | |||
| 249 | Ga0307406_10376850 | |||
| 250 | Ga0373948_0018144 | |||
| 251 | Ga0373934_0045966 | |||
| 252 | Ga0373923_0054512 | |||
| 253 | Ga0373953_0004958 | |||
| 254 | Ga0373954_0027688 | |||
| 255 | Ga0373946_0030039 | |||
| 256 | Ga0373935_0027270 | |||
| 257 | Ga0373927_0010024 | |||
| 258 | Ga0373927_0323408 | |||
| 259 | Ga0373933_0007342 | |||
| 260 | Ga0373933_0261340 | |||
| 261 | Ga0373933_0374215 | |||
| 262 | Ga0373937_0006757 | |||
| 263 | Ga0373937_0032722 | |||
| 264 | Ga0373925_0056733 | |||
| 265 | Ga0373925_0088344 | |||
| 266 | Ga0395905_0000191 | |||
| 267 | Ga0436364_0844986 | |||
| 268 | Ga0436364_1226057 | |||
| 269 | Ga0436365_0759726 | |||
| 270 | Ga0436365_0820905 | |||
| 271 | Ga0436360_0293206 | |||
| 272 | Ga0436360_0871572 | |||
| 273 | Ga0436360_1197257 | |||
| 274 | Ga0436360_1274740 | |||
| 275 | Ga0436363_1587635 | |||
| 276 | Ga0466963_0179035 | |||
| 277 | Ga0495629_0244963 | |||
| 278 | Ga0495664_0002198 | |||
| 279 | Ga0495664_0273509 | |||
| 280 | Ga0495608_0009218 | |||
| 281 | Ga0495618_0083259 | |||
| 282 | Ga0495628_0079758 | |||
| 283 | Ga0495630_0322686 | |||
| 284 | Ga0495652_0051024 | |||
| 285 | Ga0495640_0010367 | |||
| 286 | Ga0495640_0332081 | |||
| 287 | Ga0495587_0019034 | |||
| 288 | Ga0495645_0002174 | |||
| 289 | Ga0495667_0005381 | |||
| 290 | Ga0495635_0098276 | |||
| 291 | Ga0495657_0067456 | |||
| 292 | Ga0495599_0136375 | |||
| 293 | Ga0495646_0001534 | |||
| 294 | Ga0495600_0018136 | |||
| 295 | Ga0495604_0026606 | |||
| 296 | Ga0495680_0073408 | |||
| 297 | Ga0495675_0044504 | |||
| 298 | Ga0495673_0000346 | |||
| 299 | Ga0495602_0001212 | |||
| 300 | Ga0495602_0036151 | |||
| 301 | Ga0496103_0109726 | |||
| 302 | Ga0496106_0207066 | |||
| 303 | Ga0496107_0360608 | |||
| 304 | Ga0496112_0071526 | |||
| 305 | Ga0496119_0004188 | |||
| 306 | Ga0496126_0283975 | |||
| 307 | Ga0501032_0011709 | |||
| 308 | Ga0501033_0001001 | |||
| 309 | Ga0501034_0048922 | |||
| 310 | Ga0501036_0000878 | |||
| 311 | Ga0501037_0000705 | |||
| 312 | Ga0501037_0058450 | |||
| 313 | Ga0501039_0006168 | |||
| 314 | Ga0501043_0003068 | |||
| 315 | Ga0501043_0130816 | |||
| 316 | Ga0501043_0154830 | |||
| 317 | Ga0501046_0002293 | |||
| 318 | Ga0501067_0017008 | |||
| 319 | Ga0501068_0011321 | |||
| 320 | Ga0501070_0007455 | |||
| 321 | Ga0501073_0000889 | |||
| 322 | Ga0501074_0007778 | |||
| 323 | Ga0501080_0013325 | |||
| 324 | Ga0501083_0002329 | |||
| 325 | Ga0501035_0002094 | |||
| 326 | Ga0501035_0117886 | |||
| 327 | Ga0501035_0259016 | |||
| 328 | Ga0501044_0002567 | |||
| 329 | Ga0501044_0090148 | |||
| 330 | nmdc:mga0qj67_489623_c1 | |||
| 331 | Ga0495601_0000719 | |||
| 332 | Ga0495612_0000161 | |||
| 333 | Ga0495595_0002624 | |||
| 334 | Ga0495595_0156703 | |||
| 335 | Ga0495619_0015944 | |||
| 336 | Ga0495619_0016270 | |||
| 337 | Ga0500578_0121038 | |||
| 338 | Ga0500643_000121 | |||
| 339 | Ga0500651_0099591 | |||
| 340 | Ga0500566_0016757 | |||
| 341 | Ga0500595_000226 | |||
| 342 | Ga0500595_002128 | |||
| 343 | Ga0500628_009389 | |||
| 344 | Ga0500577_0054597 | |||
| 345 | Ga0500604_0070531 | |||
| 346 | Ga0500609_001276 | |||
| 347 | Ga0501084_0000787 | |||
| 348 | Ga0501082_0007629 | |||
| 349 | 2508730605 | |||
| 350 | 2599106067 | |||
| 351 | 2643924330 | |||
| 352 | 2776258601 | |||
| 353 | 2842340137 | |||
| 354 | 2846955861 | |||
| 355 | 2848862317 | |||
| 356 | 8002061810 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4whx-assembly1.cif.gz_E | x-ray crystal structure of an amino acid aminotransferase from burkholderia pseudomallei bound to the co-factor pyridoxal phosphate | 0.9457 | 8 | 296 |
| 1i1l-assembly1.cif.gz_A | crystal structure of eschelichia coli branched-chain amino acid aminotransferase. | 0.9356 | 12 | 297 |
| 6nst-assembly1.cif.gz_B | crystal structure of branched chain amino acid aminotransferase from pseudomonas aeruginosa | 0.9337 | 8 | 295 |
| 5e25-assembly2.cif.gz_B-2 | crystal structure of branched-chain aminotransferase from thermophilic archaea geoglobus acetivorans complexed with alpha-ketoglutarate | 0.9275 | 13 | 289 |
| 3u0g-assembly2.cif.gz_A | crystal structure of branched-chain amino acid aminotransferase from burkholderia pseudomallei | 0.9265 | 8 | 296 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3u0gF02 | Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 | 0.9533 | 140 | 293 | 3.20.10.10 |
| 6gkrB02 | Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 | 0.9394 | 141 | 294 | 3.20.10.10 |
| 6h65B02 | Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 | 0.9364 | 137 | 293 | 3.20.10.10 |
| af_P0AB80_137_302_3.30.470.10 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.9319 | 140 | 297 | 3.30.470.10 |
| 5mr0A02 | Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 | 0.9317 | 141 | 289 | 3.20.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A349S5M3-F1-model_v4 | branched-chain-amino-acid transaminase (EC 2.6.1.42) | 0.9614 | 175 | 295 |
GO:0005829
GO:0006532 GO:0009098 GO:0009099 GO:0052655 GO:0052656 |
| AF-A0A2S6SN88-F1-model_v4 | Probable branched-chain-amino-acid aminotransferase (EC 2.6.1.42) | 0.9598 | 64 | 295 |
GO:0003824
GO:0008652 GO:0009082 |
| AF-U3AAQ9-F1-model_v4 | Branched-chain-amino-acid aminotransferase (BCAT) (EC 2.6.1.42) | 0.9572 | 8 | 293 |
GO:0009097
GO:0009098 GO:0009099 GO:0052655 GO:0052656 |
| AF-A0A4V0I2N3-F1-model_v4 | Branched-chain-amino-acid aminotransferase (BCAT) (EC 2.6.1.42) | 0.9567 | 4 | 293 |
GO:0005829
GO:0009097 GO:0009098 GO:0009099 GO:0052655 GO:0052656 |
| AF-A0A259LQ31-F1-model_v4 | branched-chain-amino-acid transaminase (EC 2.6.1.42) | 0.9555 | 160 | 295 |
GO:0004084
GO:0005829 GO:0006532 GO:0009098 GO:0009099 |