F272249
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 178 | 138 | 152 | 466 |
Family's Representative Sequence
| Representative Sequence | 3300031251|Ga0265327_10003090|Ga0265327_1000309014 |
| Length | 496 |
| Sequence | MNGAKPRNTPALIDSSTFVSVEISVSICQERVPGRTEDQSVNFDEYRRYDATGLAKLVADKEVSAAELLTLARERAAAVNPKINAIVRDVPAGKPSEELSGPFAGVPFLIKDLAQDYAGTPSSHGSRSLKSLPAKEHATIVQRWIDAGLVIFGKTNLPEFGAKAISEPEVWGPARNPWDLTRTPGGLVGLKPGRGLTPFGPAGGELMHGAAVQGVVSRTVRDTAAMLDVITGGEPWGPYVPGLPPSSFASAVGENPPKLRIGVRVPSAITPTPHPEAFAAVAATVRTLTELGHHVEELPQAPFDDSELARDFLLTWFVFLAWEVADAKRLTGAGDDSFERDTLIMAALGRATSSVDYVAAVQRRHDHARRLTTFFGSYDLLLTPTLATPPPKIGEFDLPAALRTAADVSLKTRTASLLRYTKIVDDMVEKNLGWVPYTQLANLTGRPAISLPLHWTADGLPLGVQFVAPLGGESLLIQLAAQLEQAVPWADRVAPL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2508501039 | Frankia saprophytica CN3 | Isolate | Nodule |
| 2 | 2551306166 | Nocardia tenerifensis NBRC 101015 | Isolate | Rhizosphere |
| 3 | 2643221687 | Mycobacterium sp. Root135 | Isolate | Unclassified |
| 4 | 2643221692 | Nocardia sp. Root136 | Isolate | Unclassified |
| 5 | 2643221715 | Mycobacterium sp. Root265 | Isolate | Unclassified |
| 6 | 2675902999 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 7 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 8 | 2773857762 | Nocardioides sp. SAI-095 | Isolate | Unclassified |
| 9 | 2773857921 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 10 | 2808606439 | Nocardioides sp. SLBN-172 | Isolate | Unclassified |
| 11 | 2811994878 | Nocardioides sp. SLBN-169 | Isolate | Unclassified |
| 12 | 2842134933 | Mycolicibacterium obuense SEMIA 442 | Isolate | Nodule |
| 13 | 2891968417 | Nocardioides luteus SAI-037 | Isolate | Unclassified |
| 14 | 2902792274 | Mycolicibacterium sp. P9-64 | Isolate | Unclassified |
| 15 | 2902810491 | Mycolicibacterium sp. P9-22 | Isolate | Unclassified |
| 16 | 2902837492 | Mycolicibacterium sp. P1-18 | Isolate | Unclassified |
| 17 | 2904765812 | Rhodococcus fascians 1590 | Isolate | Rhizosphere |
| 18 | 2904770941 | Rhodococcus fascians 1339 | Isolate | Rhizosphere |
| 19 | 2908811453 | Rhodococcus sp. 1R11 | Isolate | Unclassified |
| 20 | 2919420072 | Rhodococcus fascians 3241 | Isolate | Rhizosphere |
| 21 | 2919432681 | Rhodococcus sp. 3258 | Isolate | Rhizosphere |
| 22 | 2919713450 | Nocardia kruczakiae 4272 | Isolate | Rhizosphere |
| 23 | 2929212328 | Mycolicibacterium sp. R-73050 Hybrid assembly | Isolate | Unclassified |
| 24 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 25 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 26 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 27 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 28 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 29 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 31 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 32 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 35 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 36 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 37 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 38 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 39 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 40 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 41 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 42 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 43 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 44 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 45 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 46 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 47 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 48 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 58 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 72 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 73 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 74 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 75 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 76 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 77 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 78 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 79 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 80 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 81 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 82 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 83 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 84 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 85 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 86 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 87 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 88 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 89 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 105 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 106 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 107 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 108 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 109 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 110 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 112 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 113 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 114 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 115 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 116 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 117 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 118 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 119 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 120 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 121 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 122 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 123 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 124 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 131 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 132 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 133 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 134 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 135 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 136 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 137 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 138 | 8002775197 | Frankia nepalensis CN7 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.39 |
| Metatranscriptomes | 0 |
| Isolates | 14.61 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.12 |
| Bulb | 0 |
| Endosphere | 21.35 |
| Nodule | 3.37 |
| Rhizoplane | 7.87 |
| Rhizosphere | 49.44 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.85 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0055535_1000276 | 3300003761 | Bacteria | 53888 |
| 2 | Ga0055529_1000324 | 3300003763 | Bacteria | 53888 |
| 3 | Ga0055540_1000143 | 3300003792 | Bacteria | 71425 |
| 4 | Ga0055540_1000873 | 3300003792 | Bacteria | 19977 |
| 5 | Ga0055540_1001318 | 3300003792 | Bacteria | 14976 |
| 6 | Ga0070666_10019697 | 3300005335 | Bacteria | 4359 |
| 7 | Ga0068868_100022236 | 3300005338 | Bacteria | 4784 |
| 8 | Ga0070692_10008924 | 3300005345 | Bacteria | 4495 |
| 9 | Ga0070673_100091667 | 3300005364 | Bacteria | 2485 |
| 10 | Ga0070667_100000722 | 3300005367 | Bacteria | 31740 |
| 11 | Ga0070667_100054717 | 3300005367 | Bacteria | 3370 |
| 12 | Ga0070710_10000172 | 3300005437 | Bacteria | 29634 |
| 13 | Ga0070701_10005765 | 3300005438 | Bacteria | 5153 |
| 14 | Ga0070700_100006898 | 3300005441 | Bacteria | 6099 |
| 15 | Ga0068859_100000054 | 3300005617 | Bacteria | 123173 |
| 16 | Ga0068860_100001165 | 3300005843 | Bacteria | 28787 |
| 17 | Ga0068862_100000037 | 3300005844 | Bacteria | 172796 |
| 18 | Ga0081539_10005537 | 3300005985 | Bacteria | 12801 |
| 19 | Ga0075365_10000678 | 3300006038 | Bacteria | 13665 |
| 20 | Ga0075368_10000452 | 3300006042 | Bacteria | 12112 |
| 21 | Ga0075363_100000177 | 3300006048 | Bacteria | 16713 |
| 22 | Ga0075363_100001394 | 3300006048 | Bacteria | 9123 |
| 23 | Ga0075363_100006186 | 3300006048 | Bacteria | 5411 |
| 24 | Ga0075363_100018794 | 3300006048 | Bacteria | 3446 |
| 25 | Ga0075363_100060244 | 3300006048 | Bacteria | 2043 |
| 26 | Ga0075364_10006393 | 3300006051 | Bacteria | 6928 |
| 27 | Ga0075364_10056632 | 3300006051 | Bacteria | 2567 |
| 28 | Ga0075364_10072723 | 3300006051 | Bacteria | 2266 |
| 29 | Ga0075364_10124381 | 3300006051 | Bacteria | 1728 |
| 30 | Ga0075367_10004730 | 3300006178 | Bacteria | 6695 |
| 31 | Ga0075369_10028697 | 3300006186 | Bacteria | 2334 |
| 32 | Ga0075370_10006465 | 3300006353 | Bacteria | 5897 |
| 33 | Ga0075370_10033496 | 3300006353 | Bacteria | 2877 |
| 34 | Ga0097620_100000054 | 3300006931 | Bacteria | 123173 |
| 35 | Ga0105243_10017472 | 3300009148 | Bacteria | 5423 |
| 36 | Ga0105248_10000018 | 3300009177 | Bacteria | 294894 |
| 37 | Ga0105248_10027740 | 3300009177 | Bacteria | 6306 |
| 38 | Ga0105237_10000989 | 3300009545 | Bacteria | 38202 |
| 39 | Ga0105249_10022178 | 3300009553 | Bacteria | 5687 |
| 40 | Ga0105239_10011338 | 3300010375 | Bacteria | 9949 |
| 41 | Ga0163163_10196846 | 3300014325 | Bacteria | 2063 |
| 42 | Ga0209258_100402 | 3300025242 | Bacteria | 54030 |
| 43 | Ga0209455_1000287 | 3300025272 | Bacteria | 54030 |
| 44 | Ga0209673_1010472 | 3300025273 | Bacteria | 3907 |
| 45 | Ga0209051_1000328 | 3300025303 | Bacteria | 71477 |
| 46 | Ga0209051_1000681 | 3300025303 | Bacteria | 37784 |
| 47 | Ga0209051_1001040 | 3300025303 | Bacteria | 26240 |
| 48 | Ga0207692_10000228 | 3300025898 | Bacteria | 19007 |
| 49 | Ga0207671_10009393 | 3300025914 | Bacteria | 8176 |
| 50 | Ga0207669_10051417 | 3300025937 | Bacteria | 2469 |
| 51 | Ga0207711_10000620 | 3300025941 | Bacteria | 35686 |
| 52 | Ga0207712_10004192 | 3300025961 | Bacteria | 9104 |
| 53 | Ga0207658_10002731 | 3300025986 | Bacteria | 12753 |
| 54 | Ga0207658_10045617 | 3300025986 | Bacteria | 3196 |
| 55 | Ga0207708_10000589 | 3300026075 | Bacteria | 28085 |
| 56 | Ga0207648_10013893 | 3300026089 | Bacteria | 7467 |
| 57 | Ga0207683_10081519 | 3300026121 | Bacteria | 2872 |
| 58 | Ga0209813_10001516 | 3300027866 | Bacteria | 5218 |
| 59 | Ga0268265_10000008 | 3300028380 | Bacteria | 417328 |
| 60 | Ga0268264_10001390 | 3300028381 | Bacteria | 22683 |
| 61 | Ga0265336_10000011 | 3300028666 | Bacteria | 275816 |
| 62 | Ga0265324_10003418 | 3300029957 | Bacteria | 7578 |
| 63 | Ga0316177_1056141 | 3300030731 | Bacteria | 4720 |
| 64 | Ga0316176_1169844 | 3300030732 | Bacteria | 6830 |
| 65 | Ga0314311_1036123 | 3300030733 | Bacteria | 2565 |
| 66 | Ga0265327_10000071 | 3300031251 | Bacteria | 215502 |
| 67 | Ga0265327_10003090 | 3300031251 | Bacteria | 16431 |
| 68 | Ga0265327_10014258 | 3300031251 | Bacteria | 5208 |
| 69 | Ga0307516_10005991 | 3300031730 | Bacteria | 14373 |
| 70 | Ga0307410_10015134 | 3300031852 | Bacteria | 4567 |
| 71 | Ga0307409_100180021 | 3300031995 | Bacteria | 1870 |
| 72 | Ga0307416_100011655 | 3300032002 | Bacteria | 5880 |
| 73 | Ga0307416_100018528 | 3300032002 | Bacteria | 4907 |
| 74 | Ga0316574_0033234 | 3300035398 | Bacteria | 3139 |
| 75 | Ga0439448_0037356 | 3300042005 | Bacteria | 1560 |
| 76 | Ga0466972_0021228 | 3300044658 | Bacteria | 3240 |
| 77 | Ga0466972_0053132 | 3300044658 | Bacteria | 1951 |
| 78 | Ga0466965_0004234 | 3300044683 | Bacteria | 6377 |
| 79 | Ga0466965_0006757 | 3300044683 | Bacteria | 5234 |
| 80 | Ga0466965_0010458 | 3300044683 | Bacteria | 4329 |
| 81 | Ga0466966_0023087 | 3300044684 | Bacteria | 4075 |
| 82 | Ga0466966_0056024 | 3300044684 | Bacteria | 2495 |
| 83 | Ga0466970_0050455 | 3300044765 | Bacteria | 2219 |
| 84 | Ga0466960_0001135 | 3300044901 | Bacteria | 9560 |
| 85 | Ga0466967_0007033 | 3300045976 | Bacteria | 8057 |
| 86 | Ga0466967_0019568 | 3300045976 | Bacteria | 5448 |
| 87 | Ga0495629_0004609 | 3300046459 | Bacteria | 10319 |
| 88 | Ga0495641_0002011 | 3300046461 | Bacteria | 16506 |
| 89 | Ga0495653_0020016 | 3300046463 | Bacteria | 5423 |
| 90 | Ga0495631_0010333 | 3300046518 | Bacteria | 4622 |
| 91 | Ga0495644_0029061 | 3300046523 | Bacteria | 2090 |
| 92 | Ga0495666_0000188 | 3300046526 | Bacteria | 26481 |
| 93 | Ga0495665_0000586 | 3300046531 | Bacteria | 18594 |
| 94 | Ga0495587_0000543 | 3300046536 | Bacteria | 26180 |
| 95 | Ga0495622_0000849 | 3300046557 | Bacteria | 16827 |
| 96 | Ga0495658_0007988 | 3300046683 | Bacteria | 5241 |
| 97 | Ga0495624_0001344 | 3300046690 | Bacteria | 19219 |
| 98 | Ga0495600_0026545 | 3300046809 | Bacteria | 3738 |
| 99 | Ga0495581_0000880 | 3300047315 | Bacteria | 16047 |
| 100 | Ga0495604_0056116 | 3300047317 | Bacteria | 3033 |
| 101 | Ga0495686_0000011 | 3300047472 | Bacteria | 514750 |
| 102 | Ga0495686_0053853 | 3300047472 | Bacteria | 2520 |
| 103 | Ga0495686_0057552 | 3300047472 | Bacteria | 2426 |
| 104 | Ga0495686_0083058 | 3300047472 | Bacteria | 1954 |
| 105 | Ga0496101_0000118 | 3300048904 | Bacteria | 77684 |
| 106 | Ga0496101_0000133 | 3300048904 | Bacteria | 67081 |
| 107 | Ga0496102_0000032 | 3300048905 | Bacteria | 214049 |
| 108 | Ga0496102_0017270 | 3300048905 | Bacteria | 6320 |
| 109 | Ga0496103_0000027 | 3300048906 | Bacteria | 213677 |
| 110 | Ga0496103_0001682 | 3300048906 | Bacteria | 14467 |
| 111 | Ga0496106_0002241 | 3300048909 | Bacteria | 14411 |
| 112 | Ga0496106_0125285 | 3300048909 | Bacteria | 2011 |
| 113 | Ga0496107_0000106 | 3300048910 | Bacteria | 40710 |
| 114 | Ga0496108_0008677 | 3300048911 | Bacteria | 8241 |
| 115 | Ga0496109_0000077 | 3300048912 | Bacteria | 103492 |
| 116 | Ga0496109_0031367 | 3300048912 | Bacteria | 4769 |
| 117 | Ga0496110_0120370 | 3300048913 | Bacteria | 2364 |
| 118 | Ga0496114_0006592 | 3300048917 | Bacteria | 9152 |
| 119 | Ga0496116_0000088 | 3300048919 | Bacteria | 213188 |
| 120 | Ga0496116_0031820 | 3300048919 | Bacteria | 3768 |
| 121 | Ga0496117_0000018 | 3300048920 | Bacteria | 479613 |
| 122 | Ga0496117_0012557 | 3300048920 | Bacteria | 7455 |
| 123 | Ga0496117_0075870 | 3300048920 | Bacteria | 2231 |
| 124 | Ga0496118_0000013 | 3300048921 | Bacteria | 574008 |
| 125 | Ga0496119_0002123 | 3300048922 | Bacteria | 22312 |
| 126 | Ga0496120_0011116 | 3300048923 | Bacteria | 6214 |
| 127 | Ga0496121_0000002 | 3300048924 | Bacteria | 1494588 |
| 128 | Ga0496121_0000095 | 3300048924 | Bacteria | 209011 |
| 129 | Ga0496122_0000051 | 3300048925 | Bacteria | 265104 |
| 130 | Ga0496123_0015642 | 3300048926 | Bacteria | 6209 |
| 131 | Ga0496124_0000002 | 3300048927 | Bacteria | 1494588 |
| 132 | Ga0496124_0049863 | 3300048927 | Bacteria | 3569 |
| 133 | Ga0496125_0000002 | 3300048928 | Bacteria | 1480920 |
| 134 | Ga0496126_0000011 | 3300048929 | Bacteria | 744275 |
| 135 | Ga0496126_0000415 | 3300048929 | Bacteria | 86270 |
| 136 | Ga0501032_0014899 | 3300049569 | Bacteria | 5502 |
| 137 | Ga0501034_0101455 | 3300049571 | Bacteria | 2871 |
| 138 | Ga0501037_0005031 | 3300049573 | Bacteria | 9617 |
| 139 | Ga0501038_0013527 | 3300049574 | Bacteria | 7438 |
| 140 | Ga0501070_0026073 | 3300049586 | Bacteria | 4904 |
| 141 | Ga0501044_0019920 | 3300049823 | Bacteria | 7166 |
| 142 | nmdc:mga03n38_1408_c1 | 3300050490 | Bacteria | 6857 |
| 143 | nmdc:mga00v17_16470_c1 | 3300050491 | Bacteria | 4165 |
| 144 | nmdc:mga00v17_37832_c1 | 3300050491 | Bacteria | 2883 |
| 145 | nmdc:mga0yw44_1324_c1 | 3300050492 | Bacteria | 9788 |
| 146 | nmdc:mga0yw44_2082_c1 | 3300050492 | Bacteria | 8354 |
| 147 | nmdc:mga06z11_165486_c1 | 3300050494 | Bacteria | 1266 |
| 148 | nmdc:mga07m45_17741_c1 | 3300050496 | Bacteria | 3829 |
| 149 | nmdc:mga07m45_5101_c1 | 3300050496 | Bacteria | 6501 |
| 150 | nmdc:mga0sz30_5610_c1 | 3300050516 | Bacteria | 4610 |
| 151 | Ga0500635_0000018 | 3300053080 | Bacteria | 112805 |
| 152 | Ga0500643_001358 | 3300053087 | Bacteria | 14224 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300050494 | nmdc:mga06z11_165486_c1 | nmdc:mga06z11_165486_c1_23_1216 | 361 |
| 2 | 3300042005 | Ga0439448_0037356 | Ga0439448_0037356_180_1538 | 407 |
| 3 | 3300003792 | Ga0055540_1000873 | Ga0055540_10008735 | 411 |
| 4 | 3300025273 | Ga0209673_1010472 | Ga0209673_10104722 | 418 |
| 5 | 3300025303 | Ga0209051_1001040 | Ga0209051_100104023 | 418 |
| 6 | 3300050516 | nmdc:mga0sz30_5610_c1 | nmdc:mga0sz30_5610_c1_324_1793 | 418 |
| 7 | 3300006048 | Ga0075363_100060244 | Ga0075363_1000602441 | 432 |
| 8 | 3300031251 | Ga0265327_10014258 | Ga0265327_100142583 | 432 |
| 9 | 3300006048 | Ga0075363_100001394 | Ga0075363_1000013944 | 433 |
| 10 | 3300006051 | Ga0075364_10006393 | Ga0075364_100063935 | 433 |
| 11 | 3300050491 | nmdc:mga00v17_16470_c1 | nmdc:mga00v17_16470_c1_2330_3799 | 433 |
| 12 | 3300048905 | Ga0496102_0000032 | Ga0496102_0000032_174439_175908 | 436 |
| 13 | 3300048906 | Ga0496103_0000027 | Ga0496103_0000027_174808_176277 | 436 |
| 14 | 3300048919 | Ga0496116_0000088 | Ga0496116_0000088_174462_175931 | 436 |
| 15 | 3300048920 | Ga0496117_0000018 | Ga0496117_0000018_395910_397379 | 436 |
| 16 | 3300048921 | Ga0496118_0000013 | Ga0496118_0000013_82235_83704 | 436 |
| 17 | 3300044683 | Ga0466965_0010458 | Ga0466965_0010458_2425_3897 | 437 |
| 18 | 3300031251 | Ga0265327_10000071 | Ga0265327_10000071195 | 438 |
| 19 | 3300044684 | Ga0466966_0023087 | Ga0466966_0023087_1433_2902 | 438 |
| 20 | 3300044765 | Ga0466970_0050455 | Ga0466970_0050455_50_1528 | 441 |
| 21 | 3300005367 | Ga0070667_100054717 | Ga0070667_1000547173 | 443 |
| 22 | 3300025986 | Ga0207658_10045617 | Ga0207658_100456173 | 443 |
| 23 | 3300044684 | Ga0466966_0056024 | Ga0466966_0056024_859_2355 | 444 |
| 24 | 3300048929 | Ga0496126_0000415 | Ga0496126_0000415_38596_40167 | 444 |
| 25 | 3300003792 | Ga0055540_1000143 | Ga0055540_10001434 | 445 |
| 26 | 3300005335 | Ga0070666_10019697 | Ga0070666_100196972 | 445 |
| 27 | 3300005367 | Ga0070667_100000722 | Ga0070667_10000072218 | 445 |
| 28 | 3300006051 | Ga0075364_10124381 | Ga0075364_101243812 | 445 |
| 29 | 3300009545 | Ga0105237_10000989 | Ga0105237_100009892 | 445 |
| 30 | 3300010375 | Ga0105239_10011338 | Ga0105239_100113385 | 445 |
| 31 | 3300025303 | Ga0209051_1000328 | Ga0209051_100032872 | 445 |
| 32 | 3300025914 | Ga0207671_10009393 | Ga0207671_100093933 | 445 |
| 33 | 3300025986 | Ga0207658_10002731 | Ga0207658_100027319 | 445 |
| 34 | 3300030731 | Ga0316177_1056141 | Ga0316177_10561412 | 445 |
| 35 | 3300030732 | Ga0316176_1169844 | Ga0316176_11698446 | 445 |
| 36 | 3300030733 | Ga0314311_1036123 | Ga0314311_10361233 | 445 |
| 37 | 3300031251 | Ga0265327_10003090 | Ga0265327_1000309014 | 445 |
| 38 | 3300048904 | Ga0496101_0000118 | Ga0496101_0000118_6945_8444 | 445 |
| 39 | 3300048904 | Ga0496101_0000133 | Ga0496101_0000133_35160_36671 | 445 |
| 40 | 3300048905 | Ga0496102_0017270 | Ga0496102_0017270_4005_5504 | 445 |
| 41 | 3300048906 | Ga0496103_0001682 | Ga0496103_0001682_6838_8337 | 445 |
| 42 | 3300048909 | Ga0496106_0002241 | Ga0496106_0002241_6322_7821 | 445 |
| 43 | 3300048910 | Ga0496107_0000106 | Ga0496107_0000106_32281_33780 | 445 |
| 44 | 3300048911 | Ga0496108_0008677 | Ga0496108_0008677_1469_2968 | 445 |
| 45 | 3300048912 | Ga0496109_0000077 | Ga0496109_0000077_72160_73659 | 445 |
| 46 | 3300048913 | Ga0496110_0120370 | Ga0496110_0120370_619_2118 | 445 |
| 47 | 3300048917 | Ga0496114_0006592 | Ga0496114_0006592_4066_5565 | 445 |
| 48 | 3300048919 | Ga0496116_0031820 | Ga0496116_0031820_2249_3748 | 445 |
| 49 | 3300048920 | Ga0496117_0075870 | Ga0496117_0075870_712_2211 | 445 |
| 50 | 3300048922 | Ga0496119_0002123 | Ga0496119_0002123_19752_21251 | 445 |
| 51 | 3300048923 | Ga0496120_0011116 | Ga0496120_0011116_525_2024 | 445 |
| 52 | 3300048924 | Ga0496121_0000002 | Ga0496121_0000002_1138853_1140352 | 445 |
| 53 | 3300048924 | Ga0496121_0000095 | Ga0496121_0000095_35233_36744 | 445 |
| 54 | 3300048925 | Ga0496122_0000051 | Ga0496122_0000051_218861_220360 | 445 |
| 55 | 3300048926 | Ga0496123_0015642 | Ga0496123_0015642_955_2454 | 445 |
| 56 | 3300048927 | Ga0496124_0000002 | Ga0496124_0000002_354237_355736 | 445 |
| 57 | 3300048928 | Ga0496125_0000002 | Ga0496125_0000002_1138853_1140352 | 445 |
| 58 | 3300048929 | Ga0496126_0000011 | Ga0496126_0000011_354237_355736 | 445 |
| 59 | 3300053087 | Ga0500643_001358 | Ga0500643_001358_5359_6828 | 445 |
| 60 | 3300005437 | Ga0070710_10000172 | Ga0070710_100001724 | 446 |
| 61 | 3300005985 | Ga0081539_10005537 | Ga0081539_1000553710 | 446 |
| 62 | 3300025898 | Ga0207692_10000228 | Ga0207692_1000022814 | 446 |
| 63 | 3300044658 | Ga0466972_0053132 | Ga0466972_0053132_393_1865 | 446 |
| 64 | 3300044683 | Ga0466965_0004234 | Ga0466965_0004234_395_1867 | 446 |
| 65 | 3300044683 | Ga0466965_0006757 | Ga0466965_0006757_1587_3059 | 446 |
| 66 | 3300045976 | Ga0466967_0019568 | Ga0466967_0019568_311_1783 | 446 |
| 67 | 3300049586 | Ga0501070_0026073 | Ga0501070_0026073_927_2396 | 446 |
| 68 | iso_pu_bacteria | 2919713450 | 2919714557 | 448 |
| 69 | iso_pu_bacteria | 2643221715 | 2644638451 | 449 |
| 70 | iso_pu_bacteria | 2842134933 | 2842135878 | 449 |
| 71 | iso_pu_bacteria | 2902792274 | 2902792497 | 449 |
| 72 | iso_pu_bacteria | 2902810491 | 2902812441 | 449 |
| 73 | iso_pu_bacteria | 2902837492 | 2902839047 | 449 |
| 74 | iso_pu_bacteria | 2929212328 | 2929216026 | 449 |
| 75 | 3300006186 | Ga0075369_10028697 | Ga0075369_100286972 | 450 |
| 76 | 3300046459 | Ga0495629_0004609 | Ga0495629_0004609_1374_2876 | 450 |
| 77 | 3300046463 | Ga0495653_0020016 | Ga0495653_0020016_1499_3001 | 450 |
| 78 | 3300046526 | Ga0495666_0000188 | Ga0495666_0000188_8019_9521 | 450 |
| 79 | 3300046531 | Ga0495665_0000586 | Ga0495665_0000586_7530_9032 | 450 |
| 80 | 3300046557 | Ga0495622_0000849 | Ga0495622_0000849_5515_7017 | 450 |
| 81 | 3300046690 | Ga0495624_0001344 | Ga0495624_0001344_8223_9725 | 450 |
| 82 | 3300046809 | Ga0495600_0026545 | Ga0495600_0026545_723_2225 | 450 |
| 83 | 3300047315 | Ga0495581_0000880 | Ga0495581_0000880_9736_11238 | 450 |
| 84 | 3300047317 | Ga0495604_0056116 | Ga0495604_0056116_323_1825 | 450 |
| 85 | 3300050492 | nmdc:mga0yw44_1324_c1 | nmdc:mga0yw44_1324_c1_6730_8190 | 450 |
| 86 | iso_pu_bacteria | 2643221687 | 2644487574 | 450 |
| 87 | iso_pu_bacteria | 2984576629 | 2984579334 | 450 |
| 88 | iso_pu_bacteria | 2990256926 | 2990256945 | 450 |
| 89 | 3300005843 | Ga0068860_100001165 | Ga0068860_10000116519 | 451 |
| 90 | 3300006042 | Ga0075368_10000452 | Ga0075368_100004528 | 451 |
| 91 | 3300006048 | Ga0075363_100006186 | Ga0075363_1000061864 | 451 |
| 92 | 3300006048 | Ga0075363_100018794 | Ga0075363_1000187942 | 451 |
| 93 | 3300006353 | Ga0075370_10033496 | Ga0075370_100334962 | 451 |
| 94 | 3300027866 | Ga0209813_10001516 | Ga0209813_100015162 | 451 |
| 95 | 3300028381 | Ga0268264_10001390 | Ga0268264_1000139026 | 451 |
| 96 | 3300031730 | Ga0307516_10005991 | Ga0307516_100059918 | 451 |
| 97 | 3300046536 | Ga0495587_0000543 | Ga0495587_0000543_22988_24490 | 451 |
| 98 | 3300050496 | nmdc:mga07m45_5101_c1 | nmdc:mga07m45_5101_c1_3769_5232 | 451 |
| 99 | 3300006038 | Ga0075365_10000678 | Ga0075365_1000067810 | 452 |
| 100 | 3300006048 | Ga0075363_100000177 | Ga0075363_10000017710 | 452 |
| 101 | 3300006051 | Ga0075364_10072723 | Ga0075364_100727232 | 452 |
| 102 | 3300006178 | Ga0075367_10004730 | Ga0075367_100047307 | 452 |
| 103 | 3300006353 | Ga0075370_10006465 | Ga0075370_100064652 | 452 |
| 104 | 3300045976 | Ga0466967_0007033 | Ga0466967_0007033_5739_7205 | 452 |
| 105 | 3300050490 | nmdc:mga03n38_1408_c1 | nmdc:mga03n38_1408_c1_1437_2906 | 452 |
| 106 | 3300050491 | nmdc:mga00v17_37832_c1 | nmdc:mga00v17_37832_c1_1210_2679 | 452 |
| 107 | 3300050492 | nmdc:mga0yw44_2082_c1 | nmdc:mga0yw44_2082_c1_6649_8118 | 452 |
| 108 | 3300050496 | nmdc:mga07m45_17741_c1 | nmdc:mga07m45_17741_c1_1214_2683 | 452 |
| 109 | iso_pu_bacteria | 2773857762 | 2774396173 | 452 |
| 110 | iso_pu_bacteria | 2808606439 | 2809197811 | 452 |
| 111 | iso_pu_bacteria | 2811994878 | 2812347699 | 452 |
| 112 | iso_pu_bacteria | 2891968417 | 2891968891 | 452 |
| 113 | iso_pu_bacteria | 8002775197 | 8002779300 | 452 |
| 114 | 3300003792 | Ga0055540_1001318 | Ga0055540_10013185 | 453 |
| 115 | 3300006051 | Ga0075364_10056632 | Ga0075364_100566322 | 453 |
| 116 | 3300025303 | Ga0209051_1000681 | Ga0209051_100068125 | 453 |
| 117 | 3300026121 | Ga0207683_10081519 | Ga0207683_100815192 | 453 |
| 118 | 3300032002 | Ga0307416_100011655 | Ga0307416_1000116553 | 453 |
| 119 | 3300044658 | Ga0466972_0021228 | Ga0466972_0021228_18_1487 | 453 |
| 120 | 3300044901 | Ga0466960_0001135 | Ga0466960_0001135_1370_2839 | 453 |
| 121 | 3300048909 | Ga0496106_0125285 | Ga0496106_0125285_276_1745 | 453 |
| 122 | 3300048912 | Ga0496109_0031367 | Ga0496109_0031367_2473_3942 | 453 |
| 123 | 3300049569 | Ga0501032_0014899 | Ga0501032_0014899_802_2271 | 453 |
| 124 | 3300049571 | Ga0501034_0101455 | Ga0501034_0101455_1371_2840 | 453 |
| 125 | 3300049573 | Ga0501037_0005031 | Ga0501037_0005031_1852_3321 | 453 |
| 126 | 3300049574 | Ga0501038_0013527 | Ga0501038_0013527_3819_5288 | 453 |
| 127 | 3300049823 | Ga0501044_0019920 | Ga0501044_0019920_4566_6035 | 453 |
| 128 | iso_pu_bacteria | 2643221692 | 2644511875 | 453 |
| 129 | 3300046461 | Ga0495641_0002011 | Ga0495641_0002011_12374_13846 | 454 |
| 130 | 3300046518 | Ga0495631_0010333 | Ga0495631_0010333_893_2362 | 454 |
| 131 | 3300046523 | Ga0495644_0029061 | Ga0495644_0029061_560_2029 | 454 |
| 132 | 3300046683 | Ga0495658_0007988 | Ga0495658_0007988_2632_4104 | 454 |
| 133 | 3300047472 | Ga0495686_0000011 | Ga0495686_0000011_118777_120246 | 454 |
| 134 | 3300047472 | Ga0495686_0083058 | Ga0495686_0083058_466_1935 | 454 |
| 135 | 3300048927 | Ga0496124_0049863 | Ga0496124_0049863_1408_2886 | 454 |
| 136 | iso_pu_bacteria | 2904765812 | 2904768245 | 454 |
| 137 | iso_pu_bacteria | 2904770941 | 2904775433 | 454 |
| 138 | iso_pu_bacteria | 2908811453 | 2908815555 | 454 |
| 139 | iso_pu_bacteria | 2919420072 | 2919421569 | 454 |
| 140 | iso_pu_bacteria | 2919432681 | 2919434873 | 454 |
| 141 | iso_pu_bacteria | 2508501039 | 2508674202 | 456 |
| 142 | iso_pu_bacteria | 2551306166 | 2552110657 | 456 |
| 143 | iso_pu_bacteria | 2675902999 | 2676198733 | 456 |
| 144 | iso_pu_bacteria | 2687453737 | 2689960019 | 456 |
| 145 | iso_pu_bacteria | 2773857921 | 2774843311 | 456 |
| 146 | 3300005617 | Ga0068859_100000054 | Ga0068859_10000005457 | 458 |
| 147 | 3300005844 | Ga0068862_100000037 | Ga0068862_100000037118 | 458 |
| 148 | 3300006931 | Ga0097620_100000054 | Ga0097620_10000005457 | 458 |
| 149 | 3300009553 | Ga0105249_10022178 | Ga0105249_100221782 | 458 |
| 150 | 3300014325 | Ga0163163_10196846 | Ga0163163_101968461 | 458 |
| 151 | 3300025961 | Ga0207712_10004192 | Ga0207712_100041926 | 458 |
| 152 | 3300028380 | Ga0268265_10000008 | Ga0268265_10000008216 | 458 |
| 153 | 3300047472 | Ga0495686_0053853 | Ga0495686_0053853_676_2163 | 458 |
| 154 | 3300009177 | Ga0105248_10000018 | Ga0105248_10000018192 | 459 |
| 155 | 3300025941 | Ga0207711_10000620 | Ga0207711_1000062016 | 459 |
| 156 | 3300048920 | Ga0496117_0012557 | Ga0496117_0012557_1057_2556 | 459 |
| 157 | 3300047472 | Ga0495686_0057552 | Ga0495686_0057552_692_2179 | 460 |
| 158 | 3300005338 | Ga0068868_100022236 | Ga0068868_1000222364 | 462 |
| 159 | 3300005345 | Ga0070692_10008924 | Ga0070692_100089242 | 462 |
| 160 | 3300005364 | Ga0070673_100091667 | Ga0070673_1000916672 | 462 |
| 161 | 3300005438 | Ga0070701_10005765 | Ga0070701_100057652 | 462 |
| 162 | 3300005441 | Ga0070700_100006898 | Ga0070700_1000068986 | 462 |
| 163 | 3300009148 | Ga0105243_10017472 | Ga0105243_100174722 | 462 |
| 164 | 3300009177 | Ga0105248_10027740 | Ga0105248_100277406 | 462 |
| 165 | 3300025937 | Ga0207669_10051417 | Ga0207669_100514172 | 462 |
| 166 | 3300026075 | Ga0207708_10000589 | Ga0207708_1000058927 | 462 |
| 167 | 3300026089 | Ga0207648_10013893 | Ga0207648_100138935 | 462 |
| 168 | 3300031852 | Ga0307410_10015134 | Ga0307410_100151342 | 462 |
| 169 | 3300031995 | Ga0307409_100180021 | Ga0307409_1001800212 | 462 |
| 170 | 3300032002 | Ga0307416_100018528 | Ga0307416_1000185282 | 462 |
| 171 | 3300035398 | Ga0316574_0033234 | Ga0316574_0033234_1216_2712 | 462 |
| 172 | 3300003761 | Ga0055535_1000276 | Ga0055535_10002762 | 464 |
| 173 | 3300003763 | Ga0055529_1000324 | Ga0055529_100032444 | 464 |
| 174 | 3300025242 | Ga0209258_100402 | Ga0209258_10040242 | 464 |
| 175 | 3300025272 | Ga0209455_1000287 | Ga0209455_100028742 | 464 |
| 176 | 3300028666 | Ga0265336_10000011 | Ga0265336_1000001196 | 464 |
| 177 | 3300029957 | Ga0265324_10003418 | Ga0265324_100034184 | 464 |
| 178 | 3300053080 | Ga0500635_0000018 | Ga0500635_0000018_44634_46151 | 464 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3a2q-assembly1.cif.gz_A | structure of 6-aminohexanoate cyclic dimer hydrolase complexed with substrate | 0.8937 | 7 | 459 |
| 3a2p-assembly1.cif.gz_A | structure of 6-aminohexanoate cyclic dimer hydrolase | 0.882 | 7 | 461 |
| 3a2q-assembly1.cif.gz_A | structure of 6-aminohexanoate cyclic dimer hydrolase complexed with substrate | 0.8716 | 7 | 459 |
| 3a2p-assembly1.cif.gz_A | structure of 6-aminohexanoate cyclic dimer hydrolase | 0.8637 | 7 | 461 |
| 4yji-assembly1.cif.gz_A | the crystal structure of a bacterial aryl acylamidase belonging to the amidase signature (as) enzymes family | 0.8368 | 9 | 456 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3a2pA00 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.882 | 7 | 461 | 3.90.1300.10 |
| 3a2pA00 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.8637 | 7 | 461 | 3.90.1300.10 |
| af_P9WQ95_12_473_3.90.1300.10 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.8334 | 9 | 459 | 3.90.1300.10 |
| af_P9WQ97_5_462_3.90.1300.10 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.8274 | 10 | 459 | 3.90.1300.10 |
| af_P9WQ99_18_483_3.90.1300.10 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.8261 | 10 | 458 | 3.90.1300.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-D3SA22-F1-model_v4 | Amidase | 0.9705 | 1 | 458 |
GO:0016787
|
| AF-N8VDQ9-F1-model_v4 | Amidase domain-containing protein | 0.9675 | 230 | 453 |
GO:0003824
|
| AF-A0A257SD36-F1-model_v4 | deleted | 0.9658 | 7 | 459 |
|
| AF-A0A397QQT4-F1-model_v4 | deleted | 0.9656 | 1 | 459 |
|
| AF-A0A5B7ULI4-F1-model_v4 | 6-aminohexanoate-cyclic-dimer hydrolase (EC 3.5.2.12) | 0.9649 | 1 | 459 |
GO:0019874
|
Predicted Structure (AlphaFold2)
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