F271754
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 178 | 133 | 178 | 549 |
Family's Representative Sequence
| Representative Sequence | 3300005983|Ga0081540_1001221|Ga0081540_100122111 |
| Length | 502 |
| Sequence | MRLIERRIGLLFGAFLLCFLVIVARALWLQGVEGSSLASQAISQQTETITVPGLRGSMLDRRGGTLASSEDAATIYATPYQVKNPTRAAAELAPILGEKKGEVLEALTEESGFSYLAHKVDLQTAAKVENLKLEGIGQIPDSRRTYPQGSMAGQVIGAVGSENQGLIGLEQGEESVLAGENGERRIVNDALGDPIRMETVKEASDGEDIQLTLDPVIQQKTEQALARVGETYLPKGATAIVVDPRSSQILAMANWPPIDPSDLSEASEEDLMNRATGFNYEPGSTFKAFTVSNVGAVTIGLEVGAEKFSKWIDRFGFGRPTGVQFPGEEKGIVTPLDEYSGSTMGNLPIGQGISVTPMQMVQGYTAIANDGFLKPPQLIKRVGEEEVHEPRGKRVLKAQTATEIREMLEGVLAPGGTASEVSVPGYTLAGKTGTAQVAENGTYSETNYVASFIGFAPAQHPQLLAAVIVDEPQGEIYGGSVAAPAFGEIAEFALPYLGVPQE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Metagenome | Rhizosphere |
| 2 | 3300002074 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 | Metagenome | Rhizosphere |
| 3 | 3300003659 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 4 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 5 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 10 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 14 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 16 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 17 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 18 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 19 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 20 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 21 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 22 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 23 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 24 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 26 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 27 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 65 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 66 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 67 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 68 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 69 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 70 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 71 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 72 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 73 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 74 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 75 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 76 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 77 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 78 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 79 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 80 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 112 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 113 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 114 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 115 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 116 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 117 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 119 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 120 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 121 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 122 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 123 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 124 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 125 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 126 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 129 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 16.85 |
| Rhizosphere | 82.58 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.56 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24746J21847_1000716 | 3300001977 | Bacteria | 5111 |
| 2 | JGI24748J21848_1001148 | 3300002074 | Bacteria | 2887 |
| 3 | JGI25404J52841_10000793 | 3300003659 | Bacteria | 5002 |
| 4 | Ga0068868_100009074 | 3300005338 | Bacteria | 7141 |
| 5 | Ga0070674_100000036 | 3300005356 | Bacteria | 60112 |
| 6 | Ga0070688_100000099 | 3300005365 | Bacteria | 44288 |
| 7 | Ga0070688_100000149 | 3300005365 | Bacteria | 37792 |
| 8 | Ga0070713_100000092 | 3300005436 | Bacteria | 57390 |
| 9 | Ga0070711_100024080 | 3300005439 | Bacteria | 3967 |
| 10 | Ga0070700_100056247 | 3300005441 | Bacteria | 2465 |
| 11 | Ga0070685_10000024 | 3300005466 | Bacteria | 101602 |
| 12 | Ga0070685_10000025 | 3300005466 | Bacteria | 100621 |
| 13 | Ga0070672_100000025 | 3300005543 | Bacteria | 67313 |
| 14 | Ga0070665_100003670 | 3300005548 | Bacteria | 16268 |
| 15 | Ga0068855_100125865 | 3300005563 | Bacteria | 2930 |
| 16 | Ga0070664_100093114 | 3300005564 | Bacteria | 2611 |
| 17 | Ga0068854_100005748 | 3300005578 | Bacteria | 7847 |
| 18 | Ga0068856_100048107 | 3300005614 | Bacteria | 4202 |
| 19 | Ga0068852_100000006 | 3300005616 | Bacteria | 159569 |
| 20 | Ga0068852_100050017 | 3300005616 | Bacteria | 3579 |
| 21 | Ga0068864_100000031 | 3300005618 | Bacteria | 215331 |
| 22 | Ga0068866_10002691 | 3300005718 | Bacteria | 7335 |
| 23 | Ga0068861_100010447 | 3300005719 | Bacteria | 6444 |
| 24 | Ga0068851_10002288 | 3300005834 | Bacteria | 8417 |
| 25 | Ga0068851_10002382 | 3300005834 | Bacteria | 8257 |
| 26 | Ga0068858_100000284 | 3300005842 | Bacteria | 54715 |
| 27 | Ga0081540_1001221 | 3300005983 | Bacteria | 22444 |
| 28 | Ga0070712_100003049 | 3300006175 | Bacteria | 10361 |
| 29 | Ga0075431_100175257 | 3300006847 | Bacteria | 2203 |
| 30 | Ga0075433_10000851 | 3300006852 | Bacteria | 21420 |
| 31 | Ga0075433_10001372 | 3300006852 | Bacteria | 17884 |
| 32 | Ga0105245_10000135 | 3300009098 | Bacteria | 70480 |
| 33 | Ga0105245_10006457 | 3300009098 | Bacteria | 10316 |
| 34 | Ga0105247_10001358 | 3300009101 | Bacteria | 17785 |
| 35 | Ga0105242_10002932 | 3300009176 | Bacteria | 13333 |
| 36 | Ga0105248_10000008 | 3300009177 | Bacteria | 403910 |
| 37 | Ga0157370_10028676 | 3300013104 | Bacteria | 5472 |
| 38 | Ga0157370_10033909 | 3300013104 | Bacteria | 4975 |
| 39 | Ga0157378_10001054 | 3300013297 | Bacteria | 25233 |
| 40 | Ga0157378_10033214 | 3300013297 | Bacteria | 4560 |
| 41 | Ga0157372_10002897 | 3300013307 | Bacteria | 18551 |
| 42 | Ga0157375_10001512 | 3300013308 | Bacteria | 19993 |
| 43 | Ga0157380_10000037 | 3300014326 | Bacteria | 80856 |
| 44 | Ga0163161_10000021 | 3300017792 | Bacteria | 208779 |
| 45 | Ga0207656_10000433 | 3300025321 | Bacteria | 14013 |
| 46 | Ga0207642_10004992 | 3300025899 | Bacteria | 4305 |
| 47 | Ga0207710_10000180 | 3300025900 | Bacteria | 63999 |
| 48 | Ga0207705_10062876 | 3300025909 | Bacteria | 2682 |
| 49 | Ga0207693_10018791 | 3300025915 | Bacteria | 5500 |
| 50 | Ga0207663_10017369 | 3300025916 | Bacteria | 4008 |
| 51 | Ga0207663_10056466 | 3300025916 | Bacteria | 2469 |
| 52 | Ga0207650_10083050 | 3300025925 | Unclassified | 2433 |
| 53 | Ga0207687_10000007 | 3300025927 | Bacteria | 604185 |
| 54 | Ga0207687_10000657 | 3300025927 | Bacteria | 23275 |
| 55 | Ga0207700_10000007 | 3300025928 | Bacteria | 345720 |
| 56 | Ga0207664_10014592 | 3300025929 | Bacteria | 5680 |
| 57 | Ga0207690_10004725 | 3300025932 | Bacteria | 8045 |
| 58 | Ga0207686_10000580 | 3300025934 | Bacteria | 22945 |
| 59 | Ga0207709_10002134 | 3300025935 | Bacteria | 12691 |
| 60 | Ga0207669_10000049 | 3300025937 | Bacteria | 60278 |
| 61 | Ga0207704_10000059 | 3300025938 | Bacteria | 76643 |
| 62 | Ga0207691_10000135 | 3300025940 | Bacteria | 67302 |
| 63 | Ga0207711_10000006 | 3300025941 | Bacteria | 792692 |
| 64 | Ga0207661_10000986 | 3300025944 | Bacteria | 18816 |
| 65 | Ga0207661_10020519 | 3300025944 | Bacteria | 4940 |
| 66 | Ga0207668_10017013 | 3300025972 | Bacteria | 4550 |
| 67 | Ga0207640_10000151 | 3300025981 | Bacteria | 50644 |
| 68 | Ga0207677_10012507 | 3300026023 | Bacteria | 4882 |
| 69 | Ga0207703_10000018 | 3300026035 | Bacteria | 271377 |
| 70 | Ga0207702_10000360 | 3300026078 | Bacteria | 52006 |
| 71 | Ga0207702_10006968 | 3300026078 | Bacteria | 9679 |
| 72 | Ga0207676_10000031 | 3300026095 | Bacteria | 215877 |
| 73 | Ga0207675_100036553 | 3300026118 | Bacteria | 4581 |
| 74 | Ga0207698_10000013 | 3300026142 | Bacteria | 255414 |
| 75 | Ga0207698_10016854 | 3300026142 | Bacteria | 4938 |
| 76 | Ga0268266_10002714 | 3300028379 | Bacteria | 18561 |
| 77 | Ga0265326_10000066 | 3300028558 | Bacteria | 59893 |
| 78 | Ga0265322_10000001 | 3300028654 | Bacteria | 543854 |
| 79 | Ga0265336_10004164 | 3300028666 | Bacteria | 5508 |
| 80 | Ga0265338_10002303 | 3300028800 | Bacteria | 29010 |
| 81 | Ga0265332_10008057 | 3300031238 | Bacteria | 4742 |
| 82 | Ga0265328_10000527 | 3300031239 | Bacteria | 17837 |
| 83 | Ga0265320_10000002 | 3300031240 | Bacteria | 542875 |
| 84 | Ga0265339_10019046 | 3300031249 | Bacteria | 4036 |
| 85 | Ga0265331_10006486 | 3300031250 | Bacteria | 6912 |
| 86 | Ga0265327_10000011 | 3300031251 | Bacteria | 543807 |
| 87 | Ga0265316_10027016 | 3300031344 | Bacteria | 4763 |
| 88 | Ga0265314_10000726 | 3300031711 | Bacteria | 39827 |
| 89 | Ga0307415_100021244 | 3300032126 | Bacteria | 3985 |
| 90 | Ga0466963_0016909 | 3300044694 | Bacteria | 4543 |
| 91 | Ga0466958_0053231 | 3300045836 | Bacteria | 2454 |
| 92 | Ga0466967_0000038 | 3300045976 | Bacteria | 49163 |
| 93 | Ga0495592_0015306 | 3300046454 | Bacteria | 5820 |
| 94 | Ga0495603_0002143 | 3300046455 | Bacteria | 11616 |
| 95 | Ga0495629_0000145 | 3300046459 | Bacteria | 61915 |
| 96 | Ga0495629_0005376 | 3300046459 | Bacteria | 9559 |
| 97 | Ga0495653_0037024 | 3300046463 | Bacteria | 3838 |
| 98 | Ga0495653_0056956 | 3300046463 | Bacteria | 2978 |
| 99 | Ga0495662_0041641 | 3300046476 | Bacteria | 2217 |
| 100 | Ga0495606_0000072 | 3300046507 | Bacteria | 173678 |
| 101 | Ga0495608_0000023 | 3300046511 | Bacteria | 160090 |
| 102 | Ga0495608_0000080 | 3300046511 | Bacteria | 71060 |
| 103 | Ga0495628_0000165 | 3300046516 | Bacteria | 57669 |
| 104 | Ga0495628_0018989 | 3300046516 | Bacteria | 5688 |
| 105 | Ga0495630_0000012 | 3300046517 | Bacteria | 223330 |
| 106 | Ga0495630_0000145 | 3300046517 | Bacteria | 54974 |
| 107 | Ga0495652_0001047 | 3300046529 | Bacteria | 31506 |
| 108 | Ga0495652_0040052 | 3300046529 | Bacteria | 4050 |
| 109 | Ga0495587_0006985 | 3300046536 | Bacteria | 7331 |
| 110 | Ga0495598_0009164 | 3300046537 | Bacteria | 2330 |
| 111 | Ga0495645_0002645 | 3300046543 | Bacteria | 12187 |
| 112 | Ga0495645_0081510 | 3300046543 | Bacteria | 2321 |
| 113 | Ga0495656_0000210 | 3300046615 | Bacteria | 20852 |
| 114 | Ga0495634_0000034 | 3300046642 | Bacteria | 106338 |
| 115 | Ga0495634_0001103 | 3300046642 | Bacteria | 25051 |
| 116 | Ga0495635_0020201 | 3300046663 | Bacteria | 4641 |
| 117 | Ga0495588_0000244 | 3300046674 | Bacteria | 45880 |
| 118 | Ga0495657_0000020 | 3300046675 | Bacteria | 160089 |
| 119 | Ga0495647_0000098 | 3300046681 | Bacteria | 21789 |
| 120 | Ga0495658_0002109 | 3300046683 | Bacteria | 10095 |
| 121 | Ga0495669_0011912 | 3300046684 | Bacteria | 3699 |
| 122 | Ga0495613_0000251 | 3300046689 | Bacteria | 50730 |
| 123 | Ga0495624_0000354 | 3300046690 | Bacteria | 36299 |
| 124 | Ga0495600_0023302 | 3300046809 | Bacteria | 3982 |
| 125 | Ga0495604_0000106 | 3300047317 | Bacteria | 69765 |
| 126 | Ga0495604_0003919 | 3300047317 | Bacteria | 11849 |
| 127 | Ga0495674_0000029 | 3300047319 | Bacteria | 118854 |
| 128 | Ga0495676_0090829 | 3300047321 | Bacteria | 2284 |
| 129 | Ga0495680_0000183 | 3300047322 | Bacteria | 66401 |
| 130 | Ga0495680_0061793 | 3300047322 | Bacteria | 2880 |
| 131 | Ga0495675_0000506 | 3300047444 | Bacteria | 25254 |
| 132 | Ga0495602_0000142 | 3300048088 | Bacteria | 66941 |
| 133 | Ga0495602_0084711 | 3300048088 | Bacteria | 2651 |
| 134 | Ga0496100_0000005 | 3300048903 | Bacteria | 312112 |
| 135 | Ga0496101_0000022 | 3300048904 | Bacteria | 216728 |
| 136 | Ga0496102_0074315 | 3300048905 | Bacteria | 3124 |
| 137 | Ga0496104_0000004 | 3300048907 | Bacteria | 641830 |
| 138 | Ga0496104_0004295 | 3300048907 | Bacteria | 12387 |
| 139 | Ga0496105_0000001 | 3300048908 | Bacteria | 1328178 |
| 140 | Ga0496105_0006840 | 3300048908 | Bacteria | 8772 |
| 141 | Ga0496105_0011797 | 3300048908 | Bacteria | 6919 |
| 142 | Ga0496106_0001128 | 3300048909 | Bacteria | 19755 |
| 143 | Ga0496107_0000011 | 3300048910 | Bacteria | 201631 |
| 144 | Ga0496108_0000026 | 3300048911 | Bacteria | 172399 |
| 145 | Ga0496108_0002235 | 3300048911 | Bacteria | 15513 |
| 146 | Ga0496108_0003871 | 3300048911 | Bacteria | 12019 |
| 147 | Ga0496108_0011320 | 3300048911 | Bacteria | 7247 |
| 148 | Ga0496109_0000060 | 3300048912 | Bacteria | 115800 |
| 149 | Ga0496109_0000075 | 3300048912 | Bacteria | 105050 |
| 150 | Ga0496109_0001590 | 3300048912 | Bacteria | 18943 |
| 151 | Ga0496109_0073919 | 3300048912 | Bacteria | 3133 |
| 152 | Ga0496110_0000240 | 3300048913 | Bacteria | 35546 |
| 153 | Ga0496110_0028415 | 3300048913 | Bacteria | 4804 |
| 154 | Ga0496111_0000355 | 3300048914 | Bacteria | 22710 |
| 155 | Ga0496112_0000013 | 3300048915 | Bacteria | 237194 |
| 156 | Ga0496112_0080989 | 3300048915 | Bacteria | 3211 |
| 157 | Ga0496113_0000090 | 3300048916 | Bacteria | 39733 |
| 158 | Ga0496113_0101675 | 3300048916 | Bacteria | 2228 |
| 159 | Ga0496113_0128022 | 3300048916 | Bacteria | 1990 |
| 160 | Ga0496114_0000074 | 3300048917 | Bacteria | 71312 |
| 161 | Ga0496114_0125123 | 3300048917 | Bacteria | 2215 |
| 162 | Ga0496115_0000003 | 3300048918 | Bacteria | 354994 |
| 163 | Ga0496115_0000367 | 3300048918 | Bacteria | 37531 |
| 164 | Ga0496119_0018513 | 3300048922 | Bacteria | 5178 |
| 165 | Ga0501040_0062953 | 3300049576 | Bacteria | 2552 |
| 166 | Ga0501075_0031617 | 3300049591 | Bacteria | 3929 |
| 167 | Ga0501081_0048403 | 3300049743 | Bacteria | 2926 |
| 168 | nmdc:mga0a205_30840_c1 | 3300050515 | Bacteria | 5135 |
| 169 | nmdc:mga0a205_6_c1 | 3300050515 | Bacteria | 129758 |
| 170 | Ga0495601_0000027 | 3300053077 | Bacteria | 116790 |
| 171 | Ga0495601_0069138 | 3300053077 | Bacteria | 2252 |
| 172 | Ga0495612_0009045 | 3300053078 | Bacteria | 4039 |
| 173 | Ga0495595_0000022 | 3300053084 | Bacteria | 110598 |
| 174 | Ga0495595_0000107 | 3300053084 | Bacteria | 38201 |
| 175 | Ga0495619_0000008 | 3300053085 | Bacteria | 305999 |
| 176 | Ga0495619_0000077 | 3300053085 | Bacteria | 73017 |
| 177 | Ga0495619_0000152 | 3300053085 | Bacteria | 51090 |
| 178 | Ga0495619_0000222 | 3300053085 | Bacteria | 41071 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300025899 | Ga0207642_10004992 | Ga0207642_100049921 | 448 |
| 2 | 3300003659 | JGI25404J52841_10000793 | JGI25404J52841_100007932 | 502 |
| 3 | 3300005983 | Ga0081540_1001221 | Ga0081540_100122111 | 502 |
| 4 | 3300046537 | Ga0495598_0009164 | Ga0495598_0009164_643_2289 | 538 |
| 5 | 3300046516 | Ga0495628_0018989 | Ga0495628_0018989_3936_5588 | 540 |
| 6 | 3300046459 | Ga0495629_0005376 | Ga0495629_0005376_7827_9473 | 548 |
| 7 | 3300001977 | JGI24746J21847_1000716 | JGI24746J21847_10007163 | 550 |
| 8 | 3300002074 | JGI24748J21848_1001148 | JGI24748J21848_10011482 | 550 |
| 9 | 3300005338 | Ga0068868_100009074 | Ga0068868_1000090744 | 550 |
| 10 | 3300005356 | Ga0070674_100000036 | Ga0070674_10000003656 | 550 |
| 11 | 3300005365 | Ga0070688_100000099 | Ga0070688_1000000998 | 550 |
| 12 | 3300005365 | Ga0070688_100000149 | Ga0070688_10000014935 | 550 |
| 13 | 3300005436 | Ga0070713_100000092 | Ga0070713_1000000927 | 550 |
| 14 | 3300005439 | Ga0070711_100024080 | Ga0070711_1000240802 | 550 |
| 15 | 3300005441 | Ga0070700_100056247 | Ga0070700_1000562471 | 550 |
| 16 | 3300005466 | Ga0070685_10000024 | Ga0070685_1000002435 | 550 |
| 17 | 3300005466 | Ga0070685_10000025 | Ga0070685_1000002540 | 550 |
| 18 | 3300005543 | Ga0070672_100000025 | Ga0070672_10000002514 | 550 |
| 19 | 3300005548 | Ga0070665_100003670 | Ga0070665_1000036704 | 550 |
| 20 | 3300005563 | Ga0068855_100125865 | Ga0068855_1001258652 | 550 |
| 21 | 3300005564 | Ga0070664_100093114 | Ga0070664_1000931142 | 550 |
| 22 | 3300005578 | Ga0068854_100005748 | Ga0068854_1000057483 | 550 |
| 23 | 3300005614 | Ga0068856_100048107 | Ga0068856_1000481072 | 550 |
| 24 | 3300005616 | Ga0068852_100000006 | Ga0068852_10000000617 | 550 |
| 25 | 3300005616 | Ga0068852_100050017 | Ga0068852_1000500173 | 550 |
| 26 | 3300005618 | Ga0068864_100000031 | Ga0068864_100000031187 | 550 |
| 27 | 3300005718 | Ga0068866_10002691 | Ga0068866_100026915 | 550 |
| 28 | 3300005719 | Ga0068861_100010447 | Ga0068861_1000104473 | 550 |
| 29 | 3300005834 | Ga0068851_10002288 | Ga0068851_100022884 | 550 |
| 30 | 3300005834 | Ga0068851_10002382 | Ga0068851_100023823 | 550 |
| 31 | 3300005842 | Ga0068858_100000284 | Ga0068858_10000028447 | 550 |
| 32 | 3300006175 | Ga0070712_100003049 | Ga0070712_1000030492 | 550 |
| 33 | 3300006847 | Ga0075431_100175257 | Ga0075431_1001752571 | 550 |
| 34 | 3300006852 | Ga0075433_10000851 | Ga0075433_100008512 | 550 |
| 35 | 3300006852 | Ga0075433_10001372 | Ga0075433_100013722 | 550 |
| 36 | 3300009098 | Ga0105245_10000135 | Ga0105245_1000013542 | 550 |
| 37 | 3300009098 | Ga0105245_10006457 | Ga0105245_100064578 | 550 |
| 38 | 3300009101 | Ga0105247_10001358 | Ga0105247_1000135813 | 550 |
| 39 | 3300009176 | Ga0105242_10002932 | Ga0105242_1000293212 | 550 |
| 40 | 3300009177 | Ga0105248_10000008 | Ga0105248_10000008177 | 550 |
| 41 | 3300013104 | Ga0157370_10028676 | Ga0157370_100286762 | 550 |
| 42 | 3300013104 | Ga0157370_10033909 | Ga0157370_100339093 | 550 |
| 43 | 3300013297 | Ga0157378_10001054 | Ga0157378_1000105411 | 550 |
| 44 | 3300013297 | Ga0157378_10033214 | Ga0157378_100332142 | 550 |
| 45 | 3300013307 | Ga0157372_10002897 | Ga0157372_1000289714 | 550 |
| 46 | 3300013308 | Ga0157375_10001512 | Ga0157375_100015126 | 550 |
| 47 | 3300014326 | Ga0157380_10000037 | Ga0157380_1000003788 | 550 |
| 48 | 3300017792 | Ga0163161_10000021 | Ga0163161_10000021114 | 550 |
| 49 | 3300025321 | Ga0207656_10000433 | Ga0207656_100004337 | 550 |
| 50 | 3300025900 | Ga0207710_10000180 | Ga0207710_100001802 | 550 |
| 51 | 3300025909 | Ga0207705_10062876 | Ga0207705_100628761 | 550 |
| 52 | 3300025915 | Ga0207693_10018791 | Ga0207693_100187914 | 550 |
| 53 | 3300025916 | Ga0207663_10017369 | Ga0207663_100173694 | 550 |
| 54 | 3300025916 | Ga0207663_10056466 | Ga0207663_100564662 | 550 |
| 55 | 3300025925 | Ga0207650_10083050 | Ga0207650_100830501 | 550 |
| 56 | 3300025927 | Ga0207687_10000007 | Ga0207687_10000007567 | 550 |
| 57 | 3300025927 | Ga0207687_10000657 | Ga0207687_1000065720 | 550 |
| 58 | 3300025928 | Ga0207700_10000007 | Ga0207700_1000000755 | 550 |
| 59 | 3300025929 | Ga0207664_10014592 | Ga0207664_100145923 | 550 |
| 60 | 3300025932 | Ga0207690_10004725 | Ga0207690_100047254 | 550 |
| 61 | 3300025934 | Ga0207686_10000580 | Ga0207686_1000058012 | 550 |
| 62 | 3300025935 | Ga0207709_10002134 | Ga0207709_1000213410 | 550 |
| 63 | 3300025937 | Ga0207669_10000049 | Ga0207669_1000004956 | 550 |
| 64 | 3300025938 | Ga0207704_10000059 | Ga0207704_1000005926 | 550 |
| 65 | 3300025940 | Ga0207691_10000135 | Ga0207691_1000013561 | 550 |
| 66 | 3300025941 | Ga0207711_10000006 | Ga0207711_10000006572 | 550 |
| 67 | 3300025944 | Ga0207661_10000986 | Ga0207661_1000098617 | 550 |
| 68 | 3300025944 | Ga0207661_10020519 | Ga0207661_100205193 | 550 |
| 69 | 3300025972 | Ga0207668_10017013 | Ga0207668_100170133 | 550 |
| 70 | 3300025981 | Ga0207640_10000151 | Ga0207640_1000015146 | 550 |
| 71 | 3300026023 | Ga0207677_10012507 | Ga0207677_100125073 | 550 |
| 72 | 3300026035 | Ga0207703_10000018 | Ga0207703_10000018158 | 550 |
| 73 | 3300026078 | Ga0207702_10000360 | Ga0207702_1000036020 | 550 |
| 74 | 3300026078 | Ga0207702_10006968 | Ga0207702_100069682 | 550 |
| 75 | 3300026095 | Ga0207676_10000031 | Ga0207676_10000031186 | 550 |
| 76 | 3300026118 | Ga0207675_100036553 | Ga0207675_1000365533 | 550 |
| 77 | 3300026142 | Ga0207698_10000013 | Ga0207698_10000013171 | 550 |
| 78 | 3300026142 | Ga0207698_10016854 | Ga0207698_100168543 | 550 |
| 79 | 3300028379 | Ga0268266_10002714 | Ga0268266_1000271416 | 550 |
| 80 | 3300028558 | Ga0265326_10000066 | Ga0265326_1000006622 | 550 |
| 81 | 3300028654 | Ga0265322_10000001 | Ga0265322_10000001480 | 550 |
| 82 | 3300028666 | Ga0265336_10004164 | Ga0265336_100041644 | 550 |
| 83 | 3300028800 | Ga0265338_10002303 | Ga0265338_1000230325 | 550 |
| 84 | 3300031238 | Ga0265332_10008057 | Ga0265332_100080574 | 550 |
| 85 | 3300031239 | Ga0265328_10000527 | Ga0265328_1000052714 | 550 |
| 86 | 3300031240 | Ga0265320_10000002 | Ga0265320_10000002479 | 550 |
| 87 | 3300031249 | Ga0265339_10019046 | Ga0265339_100190463 | 550 |
| 88 | 3300031250 | Ga0265331_10006486 | Ga0265331_100064865 | 550 |
| 89 | 3300031251 | Ga0265327_10000011 | Ga0265327_10000011479 | 550 |
| 90 | 3300031344 | Ga0265316_10027016 | Ga0265316_100270165 | 550 |
| 91 | 3300031711 | Ga0265314_10000726 | Ga0265314_1000072633 | 550 |
| 92 | 3300032126 | Ga0307415_100021244 | Ga0307415_1000212442 | 550 |
| 93 | 3300044694 | Ga0466963_0016909 | Ga0466963_0016909_981_2633 | 550 |
| 94 | 3300045836 | Ga0466958_0053231 | Ga0466958_0053231_330_1982 | 550 |
| 95 | 3300045976 | Ga0466967_0000038 | Ga0466967_0000038_29215_30867 | 550 |
| 96 | 3300046454 | Ga0495592_0015306 | Ga0495592_0015306_1009_2661 | 550 |
| 97 | 3300046455 | Ga0495603_0002143 | Ga0495603_0002143_8328_9980 | 550 |
| 98 | 3300046459 | Ga0495629_0000145 | Ga0495629_0000145_42650_44302 | 550 |
| 99 | 3300046463 | Ga0495653_0037024 | Ga0495653_0037024_2161_3813 | 550 |
| 100 | 3300046463 | Ga0495653_0056956 | Ga0495653_0056956_25_1680 | 550 |
| 101 | 3300046476 | Ga0495662_0041641 | Ga0495662_0041641_544_2199 | 550 |
| 102 | 3300046507 | Ga0495606_0000072 | Ga0495606_0000072_128679_130331 | 550 |
| 103 | 3300046511 | Ga0495608_0000023 | Ga0495608_0000023_16180_17832 | 550 |
| 104 | 3300046511 | Ga0495608_0000080 | Ga0495608_0000080_14408_16060 | 550 |
| 105 | 3300046516 | Ga0495628_0000165 | Ga0495628_0000165_29102_30754 | 550 |
| 106 | 3300046517 | Ga0495630_0000012 | Ga0495630_0000012_36154_37806 | 550 |
| 107 | 3300046517 | Ga0495630_0000145 | Ga0495630_0000145_37108_38760 | 550 |
| 108 | 3300046529 | Ga0495652_0001047 | Ga0495652_0001047_3888_5540 | 550 |
| 109 | 3300046529 | Ga0495652_0040052 | Ga0495652_0040052_1526_3178 | 550 |
| 110 | 3300046536 | Ga0495587_0006985 | Ga0495587_0006985_5626_7278 | 550 |
| 111 | 3300046543 | Ga0495645_0002645 | Ga0495645_0002645_5909_7561 | 550 |
| 112 | 3300046543 | Ga0495645_0081510 | Ga0495645_0081510_310_1962 | 550 |
| 113 | 3300046615 | Ga0495656_0000210 | Ga0495656_0000210_17639_19291 | 550 |
| 114 | 3300046642 | Ga0495634_0000034 | Ga0495634_0000034_84947_86599 | 550 |
| 115 | 3300046642 | Ga0495634_0001103 | Ga0495634_0001103_20607_22259 | 550 |
| 116 | 3300046663 | Ga0495635_0020201 | Ga0495635_0020201_1947_3599 | 550 |
| 117 | 3300046674 | Ga0495588_0000244 | Ga0495588_0000244_26252_27904 | 550 |
| 118 | 3300046675 | Ga0495657_0000020 | Ga0495657_0000020_16180_17832 | 550 |
| 119 | 3300046681 | Ga0495647_0000098 | Ga0495647_0000098_10552_12204 | 550 |
| 120 | 3300046683 | Ga0495658_0002109 | Ga0495658_0002109_6594_8246 | 550 |
| 121 | 3300046684 | Ga0495669_0011912 | Ga0495669_0011912_1495_3150 | 550 |
| 122 | 3300046689 | Ga0495613_0000251 | Ga0495613_0000251_30559_32211 | 550 |
| 123 | 3300046690 | Ga0495624_0000354 | Ga0495624_0000354_13719_15371 | 550 |
| 124 | 3300046809 | Ga0495600_0023302 | Ga0495600_0023302_2317_3969 | 550 |
| 125 | 3300047317 | Ga0495604_0000106 | Ga0495604_0000106_29955_31607 | 550 |
| 126 | 3300047317 | Ga0495604_0003919 | Ga0495604_0003919_9634_11286 | 550 |
| 127 | 3300047319 | Ga0495674_0000029 | Ga0495674_0000029_12083_13735 | 550 |
| 128 | 3300047321 | Ga0495676_0090829 | Ga0495676_0090829_95_1747 | 550 |
| 129 | 3300047322 | Ga0495680_0000183 | Ga0495680_0000183_63780_65432 | 550 |
| 130 | 3300047322 | Ga0495680_0061793 | Ga0495680_0061793_1161_2813 | 550 |
| 131 | 3300047444 | Ga0495675_0000506 | Ga0495675_0000506_16162_17814 | 550 |
| 132 | 3300048088 | Ga0495602_0000142 | Ga0495602_0000142_18981_20633 | 550 |
| 133 | 3300048088 | Ga0495602_0084711 | Ga0495602_0084711_765_2417 | 550 |
| 134 | 3300048903 | Ga0496100_0000005 | Ga0496100_0000005_181920_183572 | 550 |
| 135 | 3300048904 | Ga0496101_0000022 | Ga0496101_0000022_58114_59766 | 550 |
| 136 | 3300048905 | Ga0496102_0074315 | Ga0496102_0074315_720_2372 | 550 |
| 137 | 3300048907 | Ga0496104_0000004 | Ga0496104_0000004_479476_481128 | 550 |
| 138 | 3300048907 | Ga0496104_0004295 | Ga0496104_0004295_9680_11335 | 550 |
| 139 | 3300048908 | Ga0496105_0000001 | Ga0496105_0000001_160703_162355 | 550 |
| 140 | 3300048908 | Ga0496105_0006840 | Ga0496105_0006840_3277_4929 | 550 |
| 141 | 3300048908 | Ga0496105_0011797 | Ga0496105_0011797_4212_5867 | 550 |
| 142 | 3300048909 | Ga0496106_0001128 | Ga0496106_0001128_50_1702 | 550 |
| 143 | 3300048910 | Ga0496107_0000011 | Ga0496107_0000011_128311_129963 | 550 |
| 144 | 3300048911 | Ga0496108_0000026 | Ga0496108_0000026_108740_110392 | 550 |
| 145 | 3300048911 | Ga0496108_0002235 | Ga0496108_0002235_13761_15413 | 550 |
| 146 | 3300048911 | Ga0496108_0003871 | Ga0496108_0003871_9887_11539 | 550 |
| 147 | 3300048911 | Ga0496108_0011320 | Ga0496108_0011320_3311_4963 | 550 |
| 148 | 3300048912 | Ga0496109_0000060 | Ga0496109_0000060_34932_36584 | 550 |
| 149 | 3300048912 | Ga0496109_0000075 | Ga0496109_0000075_30082_31734 | 550 |
| 150 | 3300048912 | Ga0496109_0001590 | Ga0496109_0001590_171_1823 | 550 |
| 151 | 3300048912 | Ga0496109_0073919 | Ga0496109_0073919_877_2529 | 550 |
| 152 | 3300048913 | Ga0496110_0000240 | Ga0496110_0000240_15984_17636 | 550 |
| 153 | 3300048913 | Ga0496110_0028415 | Ga0496110_0028415_2444_4096 | 550 |
| 154 | 3300048914 | Ga0496111_0000355 | Ga0496111_0000355_11618_13270 | 550 |
| 155 | 3300048915 | Ga0496112_0000013 | Ga0496112_0000013_117786_119438 | 550 |
| 156 | 3300048915 | Ga0496112_0080989 | Ga0496112_0080989_1500_3152 | 550 |
| 157 | 3300048916 | Ga0496113_0000090 | Ga0496113_0000090_12945_14597 | 550 |
| 158 | 3300048916 | Ga0496113_0101675 | Ga0496113_0101675_115_1767 | 550 |
| 159 | 3300048916 | Ga0496113_0128022 | Ga0496113_0128022_65_1717 | 550 |
| 160 | 3300048917 | Ga0496114_0000074 | Ga0496114_0000074_34091_35743 | 550 |
| 161 | 3300048917 | Ga0496114_0125123 | Ga0496114_0125123_486_2138 | 550 |
| 162 | 3300048918 | Ga0496115_0000003 | Ga0496115_0000003_13273_14925 | 550 |
| 163 | 3300048918 | Ga0496115_0000367 | Ga0496115_0000367_34135_35787 | 550 |
| 164 | 3300048922 | Ga0496119_0018513 | Ga0496119_0018513_2296_3948 | 550 |
| 165 | 3300049576 | Ga0501040_0062953 | Ga0501040_0062953_858_2510 | 550 |
| 166 | 3300049591 | Ga0501075_0031617 | Ga0501075_0031617_65_1717 | 550 |
| 167 | 3300049743 | Ga0501081_0048403 | Ga0501081_0048403_464_2116 | 550 |
| 168 | 3300050515 | nmdc:mga0a205_30840_c1 | nmdc:mga0a205_30840_c1_2505_4157 | 550 |
| 169 | 3300050515 | nmdc:mga0a205_6_c1 | nmdc:mga0a205_6_c1_55666_57318 | 550 |
| 170 | 3300053077 | Ga0495601_0000027 | Ga0495601_0000027_33183_34835 | 550 |
| 171 | 3300053077 | Ga0495601_0069138 | Ga0495601_0069138_31_1683 | 550 |
| 172 | 3300053078 | Ga0495612_0009045 | Ga0495612_0009045_1946_3598 | 550 |
| 173 | 3300053084 | Ga0495595_0000022 | Ga0495595_0000022_92767_94419 | 550 |
| 174 | 3300053084 | Ga0495595_0000107 | Ga0495595_0000107_44_1696 | 550 |
| 175 | 3300053085 | Ga0495619_0000008 | Ga0495619_0000008_23203_24855 | 550 |
| 176 | 3300053085 | Ga0495619_0000077 | Ga0495619_0000077_67536_69188 | 550 |
| 177 | 3300053085 | Ga0495619_0000152 | Ga0495619_0000152_12140_13792 | 550 |
| 178 | 3300053085 | Ga0495619_0000222 | Ga0495619_0000222_25695_27347 | 550 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6p54-assembly2.cif.gz_B | crystal structure of transpeptidase domain of pbp2 from neisseria gonorrhoeae acylated by ceftriaxone | 0.9486 | 211 | 549 |
| 6i1h-assembly2.cif.gz_B | crystal structure of tp domain from chlamydia trachomatis penicillin-binding protein 3 in complex with meropenem | 0.9481 | 211 | 550 |
| 4u3t-assembly2.cif.gz_B | crystal structure of the transpeptidase domain of neisseria gonorrhoeae penicillin-binding protein 2 derived from the penicillin-resistant strain 6140 | 0.9476 | 211 | 549 |
| 6xqx-assembly1.cif.gz_A | crystal structure of the catalytic domain of pbp2 s310a from neisseria gonorrhoeae with the h514a mutation at ph 7.5 | 0.9449 | 211 | 549 |
| 6xqz-assembly2.cif.gz_B | crystal structure of the catalytic domain of pbp2 s310a from neisseria gonorrhoeae at ph 7.5 | 0.9431 | 213 | 549 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4ovdA03 | Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily | 0.9532 | 274 | 452 | 3.40.710.10 |
| 3equB02 | Alpha Beta;2-Layer Sandwich;Beta-Lactamase; | 0.946 | 213 | 549 | 3.30.450.330 |
| 5uy7A00 | Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily | 0.9361 | 211 | 550 | 3.40.710.10 |
| 5df7A02 | Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily | 0.9317 | 212 | 550 | 3.40.710.10 |
| 4u3tA00 | Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily | 0.928 | 211 | 549 | 3.40.710.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7V8YT25-F1-model_v4 | Penicillin-binding protein transpeptidase domain-containing protein | 0.9709 | 409 | 550 |
GO:0005886
GO:0008658 GO:0071555 |
| AF-A0A538FLD9-F1-model_v4 | Penicillin-binding protein 2 | 0.9664 | 286 | 549 |
GO:0005886
GO:0008658 GO:0071555 |
| AF-A0A382I568-F1-model_v4 | Penicillin-binding protein transpeptidase domain-containing protein | 0.9659 | 274 | 548 |
GO:0005886
GO:0008658 GO:0071555 |
| AF-A0A7W0G9X0-F1-model_v4 | Penicillin-binding protein | 0.9635 | 456 | 550 |
GO:0005886
GO:0008658 GO:0071555 |
| AF-A0A257NIR4-F1-model_v4 | Penicillin-binding protein transpeptidase domain-containing protein | 0.9569 | 280 | 548 |
GO:0005886
GO:0008658 GO:0071555 |
Predicted Structure (AlphaFold2)
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