F271733

General Info

Members Datasets Scaffolds Average Seq Length
178 110 356 347

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10007896|Ga0081455_1000789612
Length 372
Sequence MTGPPWADATGPPTVTADSEVALRTSPLDARHRARGGKMVPFGGWDMPIQYPTGTLAEHRACRSDAAAFDVSHLGTVRVAGPGAFDRLQAALTNDLGKVAPGRAQYTHLLDEADASVLDDIIVWWVTDDRFDVMPNASNTERVLEALGGEDVTEGRAVIAVQGPRARERLETVAPEAAAVGRFRVAEVDVLGRPSVVAGTGYTGEDGVELAVDADHATAVWDAVVDAGVTPAGLGARDTLRLESGFPLHGHELGPGITPLQAGLGWVVAWDKGEFRGRKPLAVERERGVERKLRGLEVEGRRPPRADQTVTSAGDVIGRVTSGNYSPTLDRGIALAFLPPDVGEEWDVAIDVRGTEVPARLVELPFYKRERK

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
24 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
25 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
26 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
33 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
34 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
35 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
36 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
37 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
38 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
39 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
40 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
41 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
42 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
43 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
44 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
45 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
46 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
47 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
48 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
49 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
50 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
51 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
52 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
53 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
54 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
55 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
56 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
57 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
58 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
59 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
60 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
61 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
62 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
63 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
64 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
65 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
66 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
81 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
82 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
83 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
84 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
87 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
88 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
89 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
90 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
91 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
94 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
97 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
98 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
99 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
102 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
103 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
104 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
105 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
106 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
107 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
110 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.44
Metatranscriptomes 0.56
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.93
Nodule 0
Rhizoplane 1.12
Rhizosphere 94.38
Stem 0
Stem Tuber 0
Unclassified 0.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10007896 3300005937 Bacteria 11136
2 JGI25407J50210_10015545 3300003373 Bacteria 1966
3 Ga0070670_100252084 3300005331 Bacteria 1538
4 Ga0070671_100001312 3300005355 Bacteria 18678
5 Ga0070705_100012061 3300005440 Bacteria 4380
6 Ga0070708_100007667 3300005445 Bacteria 8647
7 Ga0070681_10033821 3300005458 Bacteria 5132
8 Ga0070681_10042881 3300005458 Bacteria 4533
9 Ga0070681_10056328 3300005458 Bacteria 3913
10 Ga0070704_100215921 3300005549 Unclassified 1557
11 Ga0068855_100355121 3300005563 Bacteria 1614
12 Ga0068856_100086430 3300005614 Bacteria 3116
13 Ga0081455_10004343 3300005937 Bacteria 15951
14 Ga0081538_10000109 3300005981 Bacteria 82103
15 Ga0081538_10049903 3300005981 Bacteria 2534
16 Ga0075365_10000665 3300006038 Bacteria 13755
17 Ga0075365_10030957 3300006038 Bacteria 3431
18 Ga0075365_10075999 3300006038 Bacteria 2268
19 Ga0075428_100000163 3300006844 Bacteria 61053
20 Ga0075428_100006012 3300006844 Bacteria 13484
21 Ga0075428_100009360 3300006844 Bacteria 10868
22 Ga0075428_100073522 3300006844 Bacteria 3734
23 Ga0075430_100003529 3300006846 Bacteria 13092
24 Ga0075430_100025203 3300006846 Bacteria 5058
25 Ga0075430_100195056 3300006846 Bacteria 1682
26 Ga0075431_100000062 3300006847 Bacteria 61376
27 Ga0075429_100005343 3300006880 Bacteria 11049
28 Ga0075429_100040441 3300006880 Bacteria 4059
29 Ga0075429_100048058 3300006880 Bacteria 3711
30 Ga0075429_100058711 3300006880 Bacteria 3351
31 Ga0075429_100146513 3300006880 Bacteria 2066
32 Ga0111539_10004584 3300009094 Bacteria 18060
33 Ga0111539_10032975 3300009094 Bacteria 6288
34 Ga0105245_10000822 3300009098 Bacteria 28307
35 Ga0105245_10015890 3300009098 Bacteria 6558
36 Ga0114129_10009120 3300009147 Bacteria 14142
37 Ga0114129_10020226 3300009147 Bacteria 9472
38 Ga0114129_10147041 3300009147 Bacteria 3227
39 Ga0105243_10162117 3300009148 Bacteria 1929
40 Ga0105242_10184507 3300009176 Bacteria 1843
41 Ga0105249_10150055 3300009553 Bacteria 2243
42 Ga0157378_10291337 3300013297 Bacteria 1577
43 Ga0157380_10427319 3300014326 Bacteria 1265
44 Ga0182008_10092510 3300014497 Bacteria 1492
45 Ga0206353_10702039 3300020082 Bacteria 1655
46 Ga0207707_10080916 3300025912 Bacteria 2836
47 Ga0207707_10102248 3300025912 Bacteria 2505
48 Ga0207687_10000748 3300025927 Bacteria 21952
49 Ga0207651_10193648 3300025960 Bacteria 1624
50 Ga0207702_10452000 3300026078 Bacteria 1246
51 Ga0207683_10092362 3300026121 Bacteria 2697
52 Ga0207428_10210390 3300027907 Bacteria 1461
53 Ga0265327_10045944 3300031251 Bacteria 2316
54 Ga0316578_10024903 3300031728 Bacteria 3360
55 Ga0307413_10130484 3300031824 Bacteria 1719
56 Ga0307409_100062168 3300031995 Bacteria 2922
57 Ga0373929_0005368 3300035085 Bacteria 2305
58 Ga0373932_0000439 3300035112 Bacteria 12723
59 Ga0373932_0003680 3300035112 Bacteria 3668
60 Ga0316574_0022054 3300035398 Bacteria 3789
61 Ga0316574_0284240 3300035398 Bacteria 1053
62 Ga0373931_0000005 3300035691 Bacteria 480485
63 Ga0373931_0000051 3300035691 Bacteria 62223
64 Ga0373933_0028692 3300035724 Bacteria 3212
65 Ga0373937_0004630 3300036401 Bacteria 11681
66 Ga0316584_0031929 3300036712 Bacteria 3895
67 Ga0436365_1242859 3300039437 Bacteria 3843
68 Ga0439448_0003279 3300042005 Bacteria 4468
69 Ga0439452_019992 3300042010 Bacteria 1762
70 Ga0439455_0007836 3300042012 Bacteria 2273
71 Ga0439464_0000279 3300042439 Bacteria 9594
72 Ga0439460_0002246 3300042461 Bacteria 4643
73 Ga0439440_0000974 3300042993 Bacteria 5039
74 Ga0495592_0187069 3300046454 Bacteria 1406
75 Ga0495651_0096895 3300046462 Bacteria 2203
76 Ga0495653_0062936 3300046463 Bacteria 2802
77 Ga0495639_0050692 3300046475 Bacteria 1886
78 Ga0495608_0070940 3300046511 Bacteria 2273
79 Ga0495652_0130352 3300046529 Bacteria 1992
80 Ga0495640_0116433 3300046533 Bacteria 1741
81 Ga0495657_0019251 3300046675 Bacteria 4927
82 Ga0495658_0088566 3300046683 Bacteria 1830
83 Ga0495604_0121236 3300047317 Bacteria 1893
84 Ga0495672_0068851 3300047320 Bacteria 2010
85 Ga0495680_0012527 3300047322 Bacteria 7459
86 Ga0495675_0020396 3300047444 Bacteria 4215
87 Ga0495684_0203450 3300047471 Bacteria 1459
88 Ga0496114_0050120 3300048917 Bacteria 3475
89 Ga0496114_0389681 3300048917 Bacteria 1234
90 Ga0501031_0121518 3300049568 Bacteria 1706
91 Ga0501032_0002410 3300049569 Bacteria 14586
92 Ga0501034_0031463 3300049571 Bacteria 5389
93 Ga0501034_0098315 3300049571 Bacteria 2922
94 Ga0501034_0107263 3300049571 Bacteria 2785
95 Ga0501036_0019532 3300049572 Bacteria 5689
96 Ga0501036_0023608 3300049572 Bacteria 5182
97 Ga0501036_0132168 3300049572 Bacteria 2107
98 Ga0501036_0190115 3300049572 Bacteria 1728
99 Ga0501037_0000990 3300049573 Bacteria 21062
100 Ga0501037_0048881 3300049573 Bacteria 3098
101 Ga0501038_0119280 3300049574 Bacteria 2177
102 Ga0501038_0170932 3300049574 Bacteria 1759
103 Ga0501039_0019273 3300049575 Bacteria 5232
104 Ga0501040_0003366 3300049576 Bacteria 10322
105 Ga0501040_0019197 3300049576 Bacteria 4546
106 Ga0501041_0009458 3300049577 Bacteria 5745
107 Ga0501042_0002799 3300049578 Bacteria 10790
108 Ga0501042_0049419 3300049578 Bacteria 3000
109 Ga0501043_0025274 3300049579 Bacteria 4659
110 Ga0501043_0226344 3300049579 Bacteria 1446
111 Ga0501046_0025949 3300049580 Bacteria 4789
112 Ga0501046_0053986 3300049580 Bacteria 3163
113 Ga0501046_0105207 3300049580 Bacteria 2162
114 Ga0501047_0065941 3300049581 Bacteria 3490
115 Ga0501047_0239078 3300049581 Bacteria 1667
116 Ga0501048_0071181 3300049582 Bacteria 2455
117 Ga0501048_0237044 3300049582 Bacteria 1294
118 Ga0501067_0076304 3300049583 Bacteria 1857
119 Ga0501068_0061447 3300049584 Bacteria 2283
120 Ga0501068_0102163 3300049584 Bacteria 1778
121 Ga0501069_0000052 3300049585 Bacteria 69909
122 Ga0501069_0013314 3300049585 Bacteria 4385
123 Ga0501070_0000010 3300049586 Bacteria 192096
124 Ga0501070_0000447 3300049586 Bacteria 37526
125 Ga0501071_0021745 3300049587 Bacteria 4471
126 Ga0501071_0028721 3300049587 Bacteria 3921
127 Ga0501071_0055834 3300049587 Bacteria 2851
128 Ga0501072_0001180 3300049588 Bacteria 19448
129 Ga0501072_0001814 3300049588 Bacteria 15906
130 Ga0501072_0032000 3300049588 Bacteria 4118
131 Ga0501073_0003330 3300049589 Bacteria 12077
132 Ga0501074_0058197 3300049590 Bacteria 2784
133 Ga0501075_0004835 3300049591 Bacteria 9169
134 Ga0501075_0189239 3300049591 Bacteria 1570
135 Ga0501076_0017962 3300049592 Bacteria 5380
136 Ga0501076_0216250 3300049592 Bacteria 1566
137 Ga0501076_0227016 3300049592 Bacteria 1526
138 Ga0501077_0002970 3300049593 Bacteria 10172
139 Ga0501077_0066329 3300049593 Bacteria 2289
140 Ga0501079_0008684 3300049741 Bacteria 7705
141 Ga0501079_0163585 3300049741 Bacteria 1735
142 Ga0501080_0009564 3300049742 Bacteria 8849
143 Ga0501080_0074075 3300049742 Bacteria 3168
144 Ga0501083_0007281 3300049744 Bacteria 7847
145 Ga0501083_0036364 3300049744 Bacteria 3359
146 Ga0501083_0222211 3300049744 Bacteria 1230
147 Ga0501035_0060256 3300049822 Bacteria 3379
148 Ga0501044_0011735 3300049823 Bacteria 9491
149 Ga0501044_0442017 3300049823 Bacteria 1208
150 Ga0501045_0005057 3300049824 Bacteria 9130
151 nmdc:mga00v17_231460_c1 3300050491 Bacteria 1197
152 nmdc:mga0yw44_302_c1 3300050492 Bacteria 17006
153 nmdc:mga06z11_84438_c1 3300050494 Bacteria 1711
154 nmdc:mga05p37_780440_c1 3300050507 Bacteria 1049
155 nmdc:mga09592_277777_c1 3300050508 Bacteria 1453
156 nmdc:mga09592_397_c1 3300050508 Bacteria 31877
157 nmdc:mga0qj67_41606_c1 3300050509 Bacteria 3615
158 nmdc:mga0qj67_44493_c1 3300050509 Bacteria 3499
159 nmdc:mga0qj67_46928_c1 3300050509 Bacteria 3411
160 nmdc:mga06r32_180801_c1 3300050510 Bacteria 2095
161 nmdc:mga06r32_3058_c1 3300050510 Bacteria 14969
162 nmdc:mga06r32_55884_c1 3300050510 Bacteria 3787
163 nmdc:mga08y16_13783_c1 3300050511 Bacteria 8510
164 nmdc:mga08y16_4043_c1 3300050511 Bacteria 15303
165 nmdc:mga08y16_588390_c1 3300050511 Bacteria 1123
166 Ga0495595_0034097 3300053084 Bacteria 2301
167 Ga0495619_0024264 3300053085 Bacteria 3889
168 Ga0495619_0051018 3300053085 Bacteria 2733
169 Ga0500616_0021230 3300053153 Bacteria 3644
170 Ga0501084_0001293 3300054114 Bacteria 19714
171 Ga0501084_0002105 3300054114 Bacteria 15903
172 Ga0501084_0003298 3300054114 Bacteria 13056
173 Ga0501082_0001063 3300060353 Bacteria 24341
174 Ga0501082_0009297 3300060353 Bacteria 8472
175 Ga0501082_0138675 3300060353 Bacteria 2111
176 Ga0501082_0244449 3300060353 Bacteria 1562
177 Ga0530510_0001087 3300061734 Bacteria 18017
178 Ga0530510_0004970 3300061734 Bacteria 9184
179 Ga0081455_10007896
180 JGI25407J50210_10015545
181 Ga0070670_100252084
182 Ga0070671_100001312
183 Ga0070705_100012061
184 Ga0070708_100007667
185 Ga0070681_10033821
186 Ga0070681_10042881
187 Ga0070681_10056328
188 Ga0070704_100215921
189 Ga0068855_100355121
190 Ga0068856_100086430
191 Ga0081455_10004343
192 Ga0081538_10000109
193 Ga0081538_10049903
194 Ga0075365_10000665
195 Ga0075365_10030957
196 Ga0075365_10075999
197 Ga0075428_100000163
198 Ga0075428_100006012
199 Ga0075428_100009360
200 Ga0075428_100073522
201 Ga0075430_100003529
202 Ga0075430_100025203
203 Ga0075430_100195056
204 Ga0075431_100000062
205 Ga0075429_100005343
206 Ga0075429_100040441
207 Ga0075429_100048058
208 Ga0075429_100058711
209 Ga0075429_100146513
210 Ga0111539_10004584
211 Ga0111539_10032975
212 Ga0105245_10000822
213 Ga0105245_10015890
214 Ga0114129_10009120
215 Ga0114129_10020226
216 Ga0114129_10147041
217 Ga0105243_10162117
218 Ga0105242_10184507
219 Ga0105249_10150055
220 Ga0157378_10291337
221 Ga0157380_10427319
222 Ga0182008_10092510
223 Ga0206353_10702039
224 Ga0207707_10080916
225 Ga0207707_10102248
226 Ga0207687_10000748
227 Ga0207651_10193648
228 Ga0207702_10452000
229 Ga0207683_10092362
230 Ga0207428_10210390
231 Ga0265327_10045944
232 Ga0316578_10024903
233 Ga0307413_10130484
234 Ga0307409_100062168
235 Ga0373929_0005368
236 Ga0373932_0000439
237 Ga0373932_0003680
238 Ga0316574_0022054
239 Ga0316574_0284240
240 Ga0373931_0000005
241 Ga0373931_0000051
242 Ga0373933_0028692
243 Ga0373937_0004630
244 Ga0316584_0031929
245 Ga0436365_1242859
246 Ga0439448_0003279
247 Ga0439452_019992
248 Ga0439455_0007836
249 Ga0439464_0000279
250 Ga0439460_0002246
251 Ga0439440_0000974
252 Ga0495592_0187069
253 Ga0495651_0096895
254 Ga0495653_0062936
255 Ga0495639_0050692
256 Ga0495608_0070940
257 Ga0495652_0130352
258 Ga0495640_0116433
259 Ga0495657_0019251
260 Ga0495658_0088566
261 Ga0495604_0121236
262 Ga0495672_0068851
263 Ga0495680_0012527
264 Ga0495675_0020396
265 Ga0495684_0203450
266 Ga0496114_0050120
267 Ga0496114_0389681
268 Ga0501031_0121518
269 Ga0501032_0002410
270 Ga0501034_0031463
271 Ga0501034_0098315
272 Ga0501034_0107263
273 Ga0501036_0019532
274 Ga0501036_0023608
275 Ga0501036_0132168
276 Ga0501036_0190115
277 Ga0501037_0000990
278 Ga0501037_0048881
279 Ga0501038_0119280
280 Ga0501038_0170932
281 Ga0501039_0019273
282 Ga0501040_0003366
283 Ga0501040_0019197
284 Ga0501041_0009458
285 Ga0501042_0002799
286 Ga0501042_0049419
287 Ga0501043_0025274
288 Ga0501043_0226344
289 Ga0501046_0025949
290 Ga0501046_0053986
291 Ga0501046_0105207
292 Ga0501047_0065941
293 Ga0501047_0239078
294 Ga0501048_0071181
295 Ga0501048_0237044
296 Ga0501067_0076304
297 Ga0501068_0061447
298 Ga0501068_0102163
299 Ga0501069_0000052
300 Ga0501069_0013314
301 Ga0501070_0000010
302 Ga0501070_0000447
303 Ga0501071_0021745
304 Ga0501071_0028721
305 Ga0501071_0055834
306 Ga0501072_0001180
307 Ga0501072_0001814
308 Ga0501072_0032000
309 Ga0501073_0003330
310 Ga0501074_0058197
311 Ga0501075_0004835
312 Ga0501075_0189239
313 Ga0501076_0017962
314 Ga0501076_0216250
315 Ga0501076_0227016
316 Ga0501077_0002970
317 Ga0501077_0066329
318 Ga0501079_0008684
319 Ga0501079_0163585
320 Ga0501080_0009564
321 Ga0501080_0074075
322 Ga0501083_0007281
323 Ga0501083_0036364
324 Ga0501083_0222211
325 Ga0501035_0060256
326 Ga0501044_0011735
327 Ga0501044_0442017
328 Ga0501045_0005057
329 nmdc:mga00v17_231460_c1
330 nmdc:mga0yw44_302_c1
331 nmdc:mga06z11_84438_c1
332 nmdc:mga05p37_780440_c1
333 nmdc:mga09592_277777_c1
334 nmdc:mga09592_397_c1
335 nmdc:mga0qj67_41606_c1
336 nmdc:mga0qj67_44493_c1
337 nmdc:mga0qj67_46928_c1
338 nmdc:mga06r32_180801_c1
339 nmdc:mga06r32_3058_c1
340 nmdc:mga06r32_55884_c1
341 nmdc:mga08y16_13783_c1
342 nmdc:mga08y16_4043_c1
343 nmdc:mga08y16_588390_c1
344 Ga0495595_0034097
345 Ga0495619_0024264
346 Ga0495619_0051018
347 Ga0500616_0021230
348 Ga0501084_0001293
349 Ga0501084_0002105
350 Ga0501084_0003298
351 Ga0501082_0001063
352 Ga0501082_0009297
353 Ga0501082_0138675
354 Ga0501082_0244449
355 Ga0530510_0001087
356 Ga0530510_0004970

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01571

GCV_T

Aminomethyltransferase folate-binding domain

28

267

0.97

PF08669

GCV_T_C

Glycine cleavage T-protein C-terminal barrel domain

291

368

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1woo-assembly1.cif.gz_A crystal structure of t-protein of the glycine cleavage system 0.9489 1 330
1woo-assembly1.cif.gz_A crystal structure of t-protein of the glycine cleavage system 0.935 1 330
1v5v-assembly1.cif.gz_B crystal structure of a component of glycine cleavage system: t-protein from pyrococcus horikoshii ot3 at 1.5 a resolution 0.9293 4 330
4paa-assembly2.cif.gz_B crystal structure of the mature form of rat dmgdh complexed with tetrahydrofolate 0.924 6 330
1yx2-assembly1.cif.gz_A crystal structure of the probable aminomethyltransferase from bacillus subtilis 0.9196 2 328
ID Description Score Start End Superfamily
af_O14110_304_377_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9507 253 325 2.40.30.110
af_A9C3Q7_322_398_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9496 250 325 2.40.30.110
af_P9WN51_281_363_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9494 250 329 2.40.30.110
af_Q22968_313_395_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9453 251 328 2.40.30.110
af_Q9DBT9_759_837_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9428 250 325 2.40.30.110
ID Description Score Start End GO Terms
AF-A0A7W0HE92-F1-model_v4 Glycine cleavage system aminomethyltransferase GcvT (EC 2.1.2.10) 0.986 1 289 GO:0004047
GO:0005829
GO:0005960
GO:0006546
GO:0008168
GO:0032259
AF-A0A7J2IPE5-F1-model_v4 Glycine cleavage system aminomethyltransferase GcvT 0.9729 244 330 GO:0005829
GO:0008168
GO:0032259
AF-A0A6I1QRE7-F1-model_v4 Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.9651 1 330 GO:0004047
GO:0005829
GO:0005960
GO:0008168
GO:0008483
GO:0019464
GO:0032259
AF-A0A6I2VLC2-F1-model_v4 aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.9638 1 330 GO:0004047
GO:0005829
GO:0005960
GO:0006546
GO:0008168
GO:0008483
GO:0032259
AF-A0A534SMP2-F1-model_v4 Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.9636 2 333 GO:0004047
GO:0005829
GO:0005960
GO:0008168
GO:0008483
GO:0019464
GO:0032259

Map