F271720

General Info

Members Datasets Scaffolds Average Seq Length
178 118 168 331

Family's Representative Sequence

Representative Sequence 3300005842|Ga0068858_100319172|Ga0068858_1003191721
Length 382
Sequence MCIESLGAVARRKICGTFDCVFFWQERNNTVAARKPIRVRTRAFILSKLIKVFYNISLKSPGGILSTTPGNFDDSALRLFNFQYQNNPLYQAYCNALRTDVTAVKTIEQIPFLPISFFKTHTVLTATSQTPELFFQSSGTTGENTSRHYIADPQLYEASLLAGFRQFYGDQAQYAILALLPSYLERKNASLVYMARALMEKSAHPDNGFYINEWDKLHAALQRLDSSGQKVLLLGVTFALLDFAAGYPMPLSNTIVMETGGMKGRREELTRSEVHEILKQQWQLPHIHSEYGMTELLSQAYAPKDGIHYPTATMNVLIRDINDPLDIKPIGTGALNIIDLANANSCAFIATEDIGAVSPDGSFQVLGRLDHSTLRGCSLMAV

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2738541302 Pedobacter sp. CF074 Isolate Unclassified
3 2739367651 Pedobacter sp. OK291 Isolate Unclassified
4 2739367663 Pedobacter sp. YR510 Isolate Unclassified
5 2818991437 Pedobacter terrae 518 Isolate Unclassified
6 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
7 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
8 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
9 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
10 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
11 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
87 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
103 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
104 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
105 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
106 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
109 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
110 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
111 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
114 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
115 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
116 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
117 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
118 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.82
Metatranscriptomes 0
Isolates 6.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.49
Nodule 0
Rhizoplane 0
Rhizosphere 87.08
Stem 0
Stem Tuber 0
Unclassified 8.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10032337 3300003316 Unclassified 2454
2 rootH1_10032337 3300003323 Bacteria 2581
3 rootH2_10024559 3300003320 Bacteria 24277
4 rootH2_10110806 3300003320 Bacteria 7497
5 Ga0055536_1000001 3300003781 Bacteria 630663
6 Ga0055530_10002202 3300003791 Bacteria 12899
7 Ga0065714_10064484 3300005288 Bacteria 52741
8 Ga0070658_10214915 3300005327 Bacteria 1625
9 Ga0070666_10000043 3300005335 Bacteria 111402
10 Ga0070666_10056570 3300005335 Bacteria 2649
11 Ga0070671_100061428 3300005355 Bacteria 3129
12 Ga0070667_100013846 3300005367 Bacteria 6668
13 Ga0070678_100255134 3300005456 Bacteria 1472
14 Ga0070681_10059986 3300005458 Bacteria 3783
15 Ga0068853_100031399 3300005539 Bacteria 4494
16 Ga0070672_100027627 3300005543 Bacteria 4235
17 Ga0068857_100002029 3300005577 Bacteria 16411
18 Ga0068852_100001241 3300005616 Bacteria 16992
19 Ga0068852_100031112 3300005616 Bacteria 4400
20 Ga0068859_100000012 3300005617 Bacteria 300376
21 Ga0068859_100281673 3300005617 Unclassified 1755
22 Ga0068864_100001692 3300005618 Bacteria 18147
23 Ga0068864_100087876 3300005618 Bacteria 2737
24 Ga0068863_100002451 3300005841 Bacteria 18437
25 Ga0068863_100063415 3300005841 Bacteria 3495
26 Ga0068858_100021233 3300005842 Bacteria 6064
27 Ga0068858_100319172 3300005842 Bacteria 1484
28 Ga0068860_100000033 3300005843 Bacteria 245461
29 Ga0068860_100000764 3300005843 Bacteria 36178
30 Ga0068860_100001749 3300005843 Bacteria 23145
31 Ga0081540_1004389 3300005983 Bacteria 10778
32 Ga0097621_100000277 3300006237 Bacteria 34682
33 Ga0097621_100042060 3300006237 Unclassified 3679
34 Ga0097621_100207277 3300006237 Bacteria 1704
35 Ga0068871_100000455 3300006358 Bacteria 28102
36 Ga0068871_100084510 3300006358 Bacteria 2634
37 Ga0097620_100000012 3300006931 Bacteria 300376
38 Ga0097620_100281684 3300006931 Unclassified 1755
39 Ga0105244_10025693 3300009036 Bacteria 3197
40 Ga0105240_10000023 3300009093 Bacteria 385028
41 Ga0105240_10000131 3300009093 Bacteria 154386
42 Ga0105240_10000893 3300009093 Bacteria 53349
43 Ga0105240_10001874 3300009093 Bacteria 34962
44 Ga0105240_10020835 3300009093 Bacteria 8732
45 Ga0105240_10043508 3300009093 Bacteria 5713
46 Ga0105240_10100004 3300009093 Bacteria 3529
47 Ga0105247_10027661 3300009101 Bacteria 3429
48 Ga0105241_10000518 3300009174 Bacteria 29032
49 Ga0105248_10022538 3300009177 Bacteria 6986
50 Ga0105237_10003522 3300009545 Bacteria 18555
51 Ga0105237_10004113 3300009545 Bacteria 16964
52 Ga0105237_10004328 3300009545 Bacteria 16462
53 Ga0105237_10015546 3300009545 Bacteria 7915
54 Ga0105237_10123809 3300009545 Unclassified 2580
55 Ga0105238_10001036 3300009551 Bacteria 28205
56 Ga0105238_10014101 3300009551 Bacteria 8081
57 Ga0105238_10055048 3300009551 Bacteria 3994
58 Ga0105239_10001010 3300010375 Bacteria 39353
59 Ga0105239_10001470 3300010375 Bacteria 31340
60 Ga0105239_10001887 3300010375 Bacteria 27397
61 Ga0105239_10006561 3300010375 Bacteria 13475
62 Ga0157373_10009226 3300013100 Bacteria 7293
63 Ga0157371_10000180 3300013102 Bacteria 92616
64 Ga0157370_10000531 3300013104 Bacteria 47724
65 Ga0157370_10001091 3300013104 Bacteria 34028
66 Ga0157370_10005165 3300013104 Bacteria 14723
67 Ga0157370_10031282 3300013104 Bacteria 5208
68 Ga0157370_10090020 3300013104 Bacteria 2881
69 Ga0157369_10000040 3300013105 Bacteria 183469
70 Ga0157374_10154878 3300013296 Unclassified 2230
71 Ga0157378_10009360 3300013297 Bacteria 8535
72 Ga0163162_10000558 3300013306 Bacteria 34481
73 Ga0163162_10001851 3300013306 Bacteria 19914
74 Ga0163162_10006341 3300013306 Bacteria 11455
75 Ga0163162_10076343 3300013306 Bacteria 3412
76 Ga0157372_10000573 3300013307 Bacteria 40317
77 Ga0157372_10100071 3300013307 Bacteria 3307
78 Ga0157375_10000166 3300013308 Bacteria 61836
79 Ga0157375_10045945 3300013308 Bacteria 4254
80 Ga0157375_10047784 3300013308 Bacteria 4182
81 Ga0163163_10000266 3300014325 Bacteria 52427
82 Ga0182008_10003159 3300014497 Bacteria 10077
83 Ga0157379_10040109 3300014968 Bacteria 4178
84 Ga0157376_10001396 3300014969 Bacteria 15886
85 Ga0157376_10003845 3300014969 Bacteria 10383
86 Ga0182006_1000436 3300015261 Bacteria 33177
87 Ga0182006_1000568 3300015261 Bacteria 27454
88 Ga0182007_10000033 3300015262 Bacteria 139808
89 Ga0183373_1001 3300015682 Bacteria 1410374
90 Ga0163161_10001695 3300017792 Bacteria 16178
91 Ga0163161_10004064 3300017792 Bacteria 10231
92 Ga0163161_10004993 3300017792 Bacteria 9231
93 Ga0163161_10022486 3300017792 Bacteria 4441
94 Ga0163161_10023969 3300017792 Bacteria 4307
95 Ga0209233_1003862 3300025261 Bacteria 5210
96 Ga0209676_1000008 3300025292 Bacteria 991778
97 Ga0209050_1000055 3300025298 Bacteria 339254
98 Ga0207680_10000108 3300025903 Bacteria 38066
99 Ga0207647_10020421 3300025904 Bacteria 4442
100 Ga0207705_10316624 3300025909 Bacteria 1198
101 Ga0207654_10000983 3300025911 Bacteria 15637
102 Ga0207654_10001682 3300025911 Bacteria 11556
103 Ga0207707_10149118 3300025912 Bacteria 2045
104 Ga0207695_10000016 3300025913 Bacteria 771991
105 Ga0207695_10000217 3300025913 Bacteria 155047
106 Ga0207695_10001712 3300025913 Bacteria 35115
107 Ga0207695_10006251 3300025913 Bacteria 15507
108 Ga0207695_10173225 3300025913 Bacteria 2082
109 Ga0207671_10001027 3300025914 Bacteria 33973
110 Ga0207671_10001822 3300025914 Bacteria 23779
111 Ga0207671_10002901 3300025914 Bacteria 17704
112 Ga0207694_10055234 3300025924 Bacteria 3083
113 Ga0207689_10002573 3300025942 Bacteria 16805
114 Ga0207689_10027457 3300025942 Bacteria 4764
115 Ga0207667_10000151 3300025949 Bacteria 104054
116 Ga0207658_10010043 3300025986 Bacteria 6431
117 Ga0207658_10537628 3300025986 Bacteria 1044
118 Ga0207703_10027453 3300026035 Bacteria 4483
119 Ga0207639_10057022 3300026041 Bacteria 2997
120 Ga0207702_10079336 3300026078 Bacteria 2845
121 Ga0207641_10000048 3300026088 Bacteria 178206
122 Ga0207641_10031637 3300026088 Bacteria 4389
123 Ga0207648_10010699 3300026089 Bacteria 8671
124 Ga0207676_10005736 3300026095 Bacteria 8785
125 Ga0207676_10182489 3300026095 Bacteria 1839
126 Ga0207674_10005376 3300026116 Bacteria 15236
127 Ga0207683_10289921 3300026121 Bacteria 1496
128 Ga0207698_10007263 3300026142 Bacteria 6941
129 Ga0207698_10076305 3300026142 Bacteria 2682
130 Ga0268266_10000014 3300028379 Bacteria 644033
131 Ga0268264_10000013 3300028381 Bacteria 513859
132 Ga0268264_10001559 3300028381 Bacteria 21251
133 Ga0307517_10004401 3300028786 Bacteria 21639
134 Ga0307511_10001842 3300030521 Bacteria 22267
135 Ga0265327_10000208 3300031251 Bacteria 123034
136 Ga0265327_10070903 3300031251 Bacteria 1745
137 Ga0307509_10098126 3300031507 Bacteria 2976
138 Ga0307516_10003127 3300031730 Bacteria 21526
139 Ga0307516_10035782 3300031730 Bacteria 4978
140 Ga0307405_10000003 3300031731 Bacteria 569064
141 Ga0307407_10000010 3300031903 Bacteria 186970
142 Ga0307416_100000014 3300032002 Bacteria 249053
143 Ga0307414_10010075 3300032004 Bacteria 5463
144 Ga0373946_0039275 3300035171 Unclassified 1932
145 Ga0373937_0047975 3300036401 Bacteria 3908
146 Ga0466972_0001873 3300044658 Bacteria 10314
147 Ga0453684_0208435 3300044712 Bacteria 2274
148 Ga0466968_0007749 3300044735 Bacteria 4091
149 Ga0495638_0033284 3300046460 Bacteria 3297
150 Ga0495580_0022904 3300046472 Bacteria 4592
151 Ga0495608_0098042 3300046511 Unclassified 1892
152 Ga0495610_0000051 3300046512 Bacteria 143715
153 Ga0495610_0000113 3300046512 Bacteria 94595
154 Ga0495648_0001328 3300046524 Bacteria 24502
155 Ga0495642_0062223 3300046528 Bacteria 1550
156 Ga0495586_0078883 3300046535 Unclassified 1807
157 Ga0495587_0191815 3300046536 Unclassified 1157
158 Ga0495633_0009955 3300046558 Bacteria 5220
159 Ga0495658_0019663 3300046683 Bacteria 3528
160 Ga0495636_0000062 3300047318 Bacteria 47016
161 Ga0495687_000106 3300047443 Bacteria 128130
162 Ga0495602_0302912 3300048088 Bacteria 1169
163 Ga0501219_000055 3300049703 Bacteria 18593
164 Ga0501080_0500889 3300049742 Bacteria 1085
165 Ga0501284_00082 3300050005 Bacteria 23932
166 Ga0500583_0018752 3300053092 Bacteria 2820
167 Ga0500592_005620 3300053116 Bacteria 1996
168 Ga0500622_0004613 3300053156 Bacteria 8553

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049742 Ga0501080_0500889 Ga0501080_0500889_190_1047 285
2 3300013104 Ga0157370_10005165 Ga0157370_100051652 307
3 3300031730 Ga0307516_10035782 Ga0307516_100357826 310
4 iso_pu_bacteria 2739367663 2739647145 320
5 iso_pu_bacteria 2585427687 2586210895 321
6 iso_pu_bacteria 2842722452 2842725327 321
7 iso_pu_bacteria 2842909656 2842912603 321
8 iso_pu_bacteria 2857627736 2857629626 321
9 iso_pu_bacteria 2904445276 2904446773 321
10 iso_pu_bacteria 2945997725 2946002245 321
11 iso_pu_bacteria 2954016120 2954019142 321
12 3300003320 rootH2_10024559 rootH2_1002455915 322
13 3300003320 rootH2_10110806 rootH2_101108064 322
14 3300005983 Ga0081540_1004389 Ga0081540_10043896 322
15 3300005843 Ga0068860_100000033 Ga0068860_10000003351 323
16 3300028379 Ga0268266_10000014 Ga0268266_10000014398 323
17 3300028381 Ga0268264_10000013 Ga0268264_1000001351 323
18 3300046524 Ga0495648_0001328 Ga0495648_0001328_20601_21572 323
19 3300047443 Ga0495687_000106 Ga0495687_000106_50153_51124 323
20 3300053092 Ga0500583_0018752 Ga0500583_0018752_1251_2222 323
21 3300053156 Ga0500622_0004613 Ga0500622_0004613_5371_6342 323
22 3300009093 Ga0105240_10000023 Ga0105240_10000023176 324
23 3300009093 Ga0105240_10000893 Ga0105240_1000089311 324
24 3300009545 Ga0105237_10123809 Ga0105237_101238092 324
25 3300010375 Ga0105239_10001010 Ga0105239_1000101026 324
26 3300017792 Ga0163161_10023969 Ga0163161_100239694 324
27 3300025913 Ga0207695_10006251 Ga0207695_100062512 324
28 3300009036 Ga0105244_10025693 Ga0105244_100256934 325
29 3300013100 Ga0157373_10009226 Ga0157373_100092264 325
30 3300013102 Ga0157371_10000180 Ga0157371_1000018071 325
31 3300013104 Ga0157370_10000531 Ga0157370_1000053141 325
32 3300013104 Ga0157370_10031282 Ga0157370_100312824 325
33 3300013104 Ga0157370_10090020 Ga0157370_100900202 325
34 3300013105 Ga0157369_10000040 Ga0157369_1000004026 325
35 3300013306 Ga0163162_10000558 Ga0163162_1000055830 325
36 3300013307 Ga0157372_10100071 Ga0157372_101000712 325
37 3300014497 Ga0182008_10003159 Ga0182008_100031593 325
38 3300015261 Ga0182006_1000436 Ga0182006_10004367 325
39 3300015261 Ga0182006_1000568 Ga0182006_100056815 325
40 3300015262 Ga0182007_10000033 Ga0182007_1000003347 325
41 3300015682 Ga0183373_1001 Ga0183373_1001392 325
42 3300017792 Ga0163161_10001695 Ga0163161_1000169517 325
43 3300017792 Ga0163161_10004064 Ga0163161_100040645 325
44 3300017792 Ga0163161_10022486 Ga0163161_100224863 325
45 3300028786 Ga0307517_10004401 Ga0307517_100044018 325
46 3300031730 Ga0307516_10003127 Ga0307516_1000312716 325
47 3300031731 Ga0307405_10000003 Ga0307405_10000003365 325
48 3300031903 Ga0307407_10000010 Ga0307407_1000001052 325
49 3300032002 Ga0307416_100000014 Ga0307416_100000014179 325
50 3300032004 Ga0307414_10010075 Ga0307414_100100753 325
51 3300046512 Ga0495610_0000051 Ga0495610_0000051_141336_142319 325
52 3300046512 Ga0495610_0000113 Ga0495610_0000113_75600_76583 325
53 3300046558 Ga0495633_0009955 Ga0495633_0009955_1572_2555 325
54 3300053116 Ga0500592_005620 Ga0500592_005620_978_1955 325
55 3300005617 Ga0068859_100281673 Ga0068859_1002816731 326
56 3300006237 Ga0097621_100207277 Ga0097621_1002072773 326
57 3300006931 Ga0097620_100281684 Ga0097620_1002816843 326
58 3300025942 Ga0207689_10027457 Ga0207689_100274573 326
59 3300026089 Ga0207648_10010699 Ga0207648_100106995 326
60 3300031251 Ga0265327_10000208 Ga0265327_1000020821 326
61 3300031251 Ga0265327_10070903 Ga0265327_100709032 326
62 3300049703 Ga0501219_000055 Ga0501219_000055_12255_13241 326
63 3300050005 Ga0501284_00082 Ga0501284_00082_12076_13062 326
64 iso_pu_bacteria 2738541302 2738852087 326
65 iso_pu_bacteria 2739367651 2739589734 326
66 iso_pu_bacteria 2818991437 2819546628 326
67 3300005335 Ga0070666_10056570 Ga0070666_100565703 327
68 3300005577 Ga0068857_100002029 Ga0068857_10000202910 327
69 3300005616 Ga0068852_100001241 Ga0068852_1000012412 327
70 3300005843 Ga0068860_100001749 Ga0068860_10000174911 327
71 3300009093 Ga0105240_10020835 Ga0105240_100208355 327
72 3300009093 Ga0105240_10043508 Ga0105240_100435083 327
73 3300009093 Ga0105240_10100004 Ga0105240_101000043 327
74 3300009545 Ga0105237_10003522 Ga0105237_1000352211 327
75 3300009551 Ga0105238_10014101 Ga0105238_100141012 327
76 3300009551 Ga0105238_10055048 Ga0105238_100550481 327
77 3300010375 Ga0105239_10001887 Ga0105239_1000188713 327
78 3300013104 Ga0157370_10001091 Ga0157370_1000109122 327
79 3300013306 Ga0163162_10076343 Ga0163162_100763434 327
80 3300013307 Ga0157372_10000573 Ga0157372_100005738 327
81 3300025904 Ga0207647_10020421 Ga0207647_100204213 327
82 3300025913 Ga0207695_10173225 Ga0207695_101732252 327
83 3300025949 Ga0207667_10000151 Ga0207667_1000015183 327
84 3300026078 Ga0207702_10079336 Ga0207702_100793362 327
85 3300026116 Ga0207674_10005376 Ga0207674_100053764 327
86 3300026142 Ga0207698_10007263 Ga0207698_100072633 327
87 3300044712 Ga0453684_0208435 Ga0453684_0208435_874_1863 327
88 3300046460 Ga0495638_0033284 Ga0495638_0033284_334_1317 327
89 3300003316 rootH1_10032337 rootH1_100323371 328
90 3300003781 Ga0055536_1000001 Ga0055536_1000001569 328
91 3300003791 Ga0055530_10002202 Ga0055530_1000220215 328
92 3300005288 Ga0065714_10064484 Ga0065714_1006448423 328
93 3300005327 Ga0070658_10214915 Ga0070658_102149152 328
94 3300005335 Ga0070666_10000043 Ga0070666_1000004371 328
95 3300005355 Ga0070671_100061428 Ga0070671_1000614284 328
96 3300005367 Ga0070667_100013846 Ga0070667_1000138463 328
97 3300005456 Ga0070678_100255134 Ga0070678_1002551342 328
98 3300005458 Ga0070681_10059986 Ga0070681_100599862 328
99 3300005539 Ga0068853_100031399 Ga0068853_1000313996 328
100 3300005543 Ga0070672_100027627 Ga0070672_1000276273 328
101 3300005616 Ga0068852_100031112 Ga0068852_1000311122 328
102 3300005617 Ga0068859_100000012 Ga0068859_100000012110 328
103 3300005618 Ga0068864_100001692 Ga0068864_1000016923 328
104 3300005618 Ga0068864_100087876 Ga0068864_1000878761 328
105 3300005841 Ga0068863_100002451 Ga0068863_1000024519 328
106 3300005841 Ga0068863_100063415 Ga0068863_1000634152 328
107 3300005842 Ga0068858_100021233 Ga0068858_1000212332 328
108 3300005842 Ga0068858_100319172 Ga0068858_1003191721 328
109 3300005843 Ga0068860_100000764 Ga0068860_10000076431 328
110 3300006237 Ga0097621_100000277 Ga0097621_1000002773 328
111 3300006237 Ga0097621_100042060 Ga0097621_1000420602 328
112 3300006358 Ga0068871_100000455 Ga0068871_10000045514 328
113 3300006358 Ga0068871_100084510 Ga0068871_1000845103 328
114 3300006931 Ga0097620_100000012 Ga0097620_100000012110 328
115 3300009093 Ga0105240_10000131 Ga0105240_1000013180 328
116 3300009093 Ga0105240_10001874 Ga0105240_1000187410 328
117 3300009101 Ga0105247_10027661 Ga0105247_100276614 328
118 3300009174 Ga0105241_10000518 Ga0105241_100005185 328
119 3300009177 Ga0105248_10022538 Ga0105248_100225385 328
120 3300009545 Ga0105237_10004113 Ga0105237_1000411316 328
121 3300009545 Ga0105237_10004328 Ga0105237_100043285 328
122 3300009545 Ga0105237_10015546 Ga0105237_100155467 328
123 3300009551 Ga0105238_10001036 Ga0105238_100010369 328
124 3300010375 Ga0105239_10001470 Ga0105239_1000147024 328
125 3300010375 Ga0105239_10006561 Ga0105239_100065617 328
126 3300013296 Ga0157374_10154878 Ga0157374_101548783 328
127 3300013297 Ga0157378_10009360 Ga0157378_100093606 328
128 3300013306 Ga0163162_10001851 Ga0163162_1000185113 328
129 3300013306 Ga0163162_10006341 Ga0163162_100063412 328
130 3300013308 Ga0157375_10000166 Ga0157375_1000016636 328
131 3300013308 Ga0157375_10045945 Ga0157375_100459452 328
132 3300013308 Ga0157375_10047784 Ga0157375_100477842 328
133 3300014325 Ga0163163_10000266 Ga0163163_1000026639 328
134 3300014968 Ga0157379_10040109 Ga0157379_100401092 328
135 3300014969 Ga0157376_10001396 Ga0157376_100013962 328
136 3300014969 Ga0157376_10003845 Ga0157376_100038458 328
137 3300017792 Ga0163161_10004993 Ga0163161_100049939 328
138 3300025261 Ga0209233_1003862 Ga0209233_10038623 328
139 3300025292 Ga0209676_1000008 Ga0209676_1000008294 328
140 3300025298 Ga0209050_1000055 Ga0209050_1000055118 328
141 3300025903 Ga0207680_10000108 Ga0207680_100001082 328
142 3300025909 Ga0207705_10316624 Ga0207705_103166241 328
143 3300025911 Ga0207654_10000983 Ga0207654_1000098314 328
144 3300025911 Ga0207654_10001682 Ga0207654_100016823 328
145 3300025912 Ga0207707_10149118 Ga0207707_101491182 328
146 3300025913 Ga0207695_10000016 Ga0207695_10000016141 328
147 3300025913 Ga0207695_10000217 Ga0207695_1000021772 328
148 3300025913 Ga0207695_10001712 Ga0207695_100017125 328
149 3300025914 Ga0207671_10001027 Ga0207671_1000102728 328
150 3300025914 Ga0207671_10001822 Ga0207671_1000182214 328
151 3300025914 Ga0207671_10002901 Ga0207671_1000290113 328
152 3300025924 Ga0207694_10055234 Ga0207694_100552342 328
153 3300025942 Ga0207689_10002573 Ga0207689_1000257311 328
154 3300025986 Ga0207658_10010043 Ga0207658_100100433 328
155 3300025986 Ga0207658_10537628 Ga0207658_105376281 328
156 3300026035 Ga0207703_10027453 Ga0207703_100274534 328
157 3300026041 Ga0207639_10057022 Ga0207639_100570223 328
158 3300026088 Ga0207641_10000048 Ga0207641_1000004842 328
159 3300026088 Ga0207641_10031637 Ga0207641_100316374 328
160 3300026095 Ga0207676_10005736 Ga0207676_100057364 328
161 3300026095 Ga0207676_10182489 Ga0207676_101824892 328
162 3300026121 Ga0207683_10289921 Ga0207683_102899212 328
163 3300026142 Ga0207698_10076305 Ga0207698_100763052 328
164 3300028381 Ga0268264_10001559 Ga0268264_1000155910 328
165 3300030521 Ga0307511_10001842 Ga0307511_1000184214 328
166 3300031507 Ga0307509_10098126 Ga0307509_100981262 328
167 3300035171 Ga0373946_0039275 Ga0373946_0039275_829_1830 328
168 3300036401 Ga0373937_0047975 Ga0373937_0047975_1336_2337 328
169 3300044658 Ga0466972_0001873 Ga0466972_0001873_7932_8990 328
170 3300044735 Ga0466968_0007749 Ga0466968_0007749_2926_3984 328
171 3300046472 Ga0495580_0022904 Ga0495580_0022904_3432_4433 328
172 3300046511 Ga0495608_0098042 Ga0495608_0098042_523_1524 328
173 3300046528 Ga0495642_0062223 Ga0495642_0062223_215_1207 328
174 3300046535 Ga0495586_0078883 Ga0495586_0078883_68_1069 328
175 3300046536 Ga0495587_0191815 Ga0495587_0191815_122_1123 328
176 3300046683 Ga0495658_0019663 Ga0495658_0019663_2314_3315 328
177 3300047318 Ga0495636_0000062 Ga0495636_0000062_28680_29672 328
178 3300048088 Ga0495602_0302912 Ga0495602_0302912_54_1055 328

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04443

LuxE

Acyl-protein synthetase, LuxE

71

381

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xc6-assembly1.cif.gz_E photobacterium phosphoreum fatty acid reductase complex luxc-luxe 0.8207 257 315
5gtd-assembly1.cif.gz_A o-succinylbenzoate coa synthetase (mene) from bacillus subtilis in complex with the acyl-adenylate intermediate osb-amp 0.68 80 316
4g36-assembly2.cif.gz_B photinus pyralis luciferase in the adenylate-forming conformation bound to dlsa 0.6713 119 316
5kyv-assembly2.cif.gz_B structure of photinus pyralis luciferase green shifted light emitting variant 0.6684 119 316
8aff-assembly1.cif.gz_A wild type oxalyl-coa synthetase pcs60p 0.6619 80 317
ID Description Score Start End Superfamily
af_A0A1D6Q7M3_383_529_2.30.38.10 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.7311 260 314 2.30.38.10
4eatB03 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.7035 233 316 2.30.38.10
2y4nA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.6981 14 316 3.40.50.12780
5u95D03 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.6836 260 311 2.30.38.10
af_Q69RG7_52_451_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.6778 80 315 3.40.50.12780
ID Description Score Start End GO Terms
AF-A0A522DXG7-F1-model_v4 Acyl transferase 0.9842 4 288 GO:0008218
GO:0016740
GO:0047474
AF-A0A432K0T0-F1-model_v4 Acyl transferase 0.9812 8 288 GO:0008218
GO:0016740
GO:0047474
AF-A0A519ZBF1-F1-model_v4 Acyl transferase 0.9795 2 305 GO:0008218
GO:0016740
GO:0047474
AF-A0A3D4TB36-F1-model_v4 Acyl transferase 0.9793 8 304 GO:0008218
GO:0016740
GO:0047474
AF-A0A3C1R343-F1-model_v4 deleted 0.9786 119 201

Feature Viewer

pLDDT pTM Quality
88.41 0.88 High
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Predicted Structure (AlphaFold2)

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