F271225

General Info

Members Datasets Scaffolds Average Seq Length
178 97 356 366

Family's Representative Sequence

Representative Sequence 3300003203|JGI25406J46586_10002777|JGI25406J46586_100027774
Length 420
Sequence MAAPPAARLGWAQVAAWRAARHHLDRRAPAGAELEVAAGIAGLHAQVLSSAELTLWARVEGLAPDAVRRALWEDRSLVKTWAMRGTLHLLPAAEFPMWQAALSTKRPWEARSWQRGFGVTLAELERLNQAVAEALDGRLLTREELATRVGELTAPALGDKLRGSWGALLKPAAALGLVCFAPGQGQQVRFTRPDTWLGGWVVHDPEEAMDEVTRRFLAASGPVTREDFARWWGIPSPARGARLLERLGEEVARVEVEGTAAYALAADAAGLAAARPGGPRTVRLLPAFDQYVVTATLQAERLMPGPFKARVYRPQGWLSPVLAVGGRLDGVWHQEAKGRRLLVTIEPFAGPLPAWARRAAEAEAERLAAFSGAELELRWAEGDHAAPSRLGRPSRAVAIRSATSSGSPPASTRTSNPRCW

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
9 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
14 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
26 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
35 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
36 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
37 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
38 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
39 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
40 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
41 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
42 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
43 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
44 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
45 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
46 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
47 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
48 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
49 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
50 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
51 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
52 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
53 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
54 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
57 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
58 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
59 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
60 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
61 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
75 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
76 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
77 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
78 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
79 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
80 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
81 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
82 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
83 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
84 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
85 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
88 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
94 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
95 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
96 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
97 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.12
Nodule 0
Rhizoplane 0
Rhizosphere 97.75
Stem 0
Stem Tuber 0
Unclassified 2.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002777 3300003203 Bacteria 8227
2 JGI25407J50210_10003352 3300003373 Bacteria 3821
3 JGI25407J50210_10018085 3300003373 Bacteria 1832
4 JGI25407J50210_10027346 3300003373 Bacteria 1479
5 Ga0070710_10000307 3300005437 Bacteria 23286
6 Ga0070700_100042012 3300005441 Bacteria 2805
7 Ga0070678_100340843 3300005456 Bacteria 1286
8 Ga0070698_100000511 3300005471 Bacteria 41247
9 Ga0070698_100002884 3300005471 Bacteria 18922
10 Ga0070698_100258158 3300005471 Bacteria 1675
11 Ga0070699_100000203 3300005518 Bacteria 58650
12 Ga0070672_100080028 3300005543 Bacteria 2617
13 Ga0068859_100206472 3300005617 Bacteria 2050
14 Ga0081455_10010265 3300005937 Bacteria 9521
15 Ga0081538_10000621 3300005981 Bacteria 39454
16 Ga0081538_10004317 3300005981 Bacteria 13138
17 Ga0081538_10004705 3300005981 Bacteria 12498
18 Ga0081538_10007197 3300005981 Bacteria 9659
19 Ga0081538_10008463 3300005981 Bacteria 8724
20 Ga0081538_10012337 3300005981 Bacteria 6852
21 Ga0081538_10018832 3300005981 Bacteria 5163
22 Ga0081538_10034904 3300005981 Bacteria 3314
23 Ga0081539_10001939 3300005985 Bacteria 31715
24 Ga0081539_10043418 3300005985 Bacteria 2606
25 Ga0081539_10046763 3300005985 Bacteria 2477
26 Ga0075365_10085672 3300006038 Bacteria 2140
27 Ga0075427_10006677 3300006194 Bacteria 1679
28 Ga0075428_100055949 3300006844 Bacteria 4322
29 Ga0075428_100108906 3300006844 Bacteria 3019
30 Ga0075428_100289946 3300006844 Bacteria 1760
31 Ga0075430_100003781 3300006846 Bacteria 12722
32 Ga0075430_100010541 3300006846 Bacteria 7824
33 Ga0075431_100057323 3300006847 Bacteria 4018
34 Ga0075431_100187820 3300006847 Bacteria 2118
35 Ga0075429_100010679 3300006880 Bacteria 7944
36 Ga0075429_100011353 3300006880 Bacteria 7712
37 Ga0097620_100206474 3300006931 Bacteria 2050
38 Ga0111539_10003277 3300009094 Bacteria 21399
39 Ga0111539_10013656 3300009094 Bacteria 10144
40 Ga0111539_10077501 3300009094 Bacteria 3912
41 Ga0111539_10087265 3300009094 Bacteria 3665
42 Ga0111539_10425836 3300009094 Unclassified 1546
43 Ga0105245_10000636 3300009098 Bacteria 31917
44 Ga0114129_10049109 3300009147 Bacteria 5930
45 Ga0105243_10277577 3300009148 Bacteria 1508
46 Ga0163163_10012192 3300014325 Bacteria 7824
47 Ga0213875_10011164 3300021388 Bacteria 4477
48 Ga0207692_10001060 3300025898 Bacteria 10047
49 Ga0207687_10001268 3300025927 Bacteria 17277
50 Ga0207691_10096939 3300025940 Bacteria 2636
51 Ga0207661_10173857 3300025944 Bacteria 1877
52 Ga0207668_10085417 3300025972 Bacteria 2303
53 Ga0207708_10028972 3300026075 Bacteria 4193
54 Ga0207648_10070082 3300026089 Bacteria 3056
55 Ga0207675_100064156 3300026118 Bacteria 3433
56 Ga0207428_10001710 3300027907 Bacteria 22516
57 Ga0307410_10007427 3300031852 Bacteria 5999
58 Ga0307410_10016282 3300031852 Bacteria 4430
59 Ga0307406_10044507 3300031901 Bacteria 2782
60 Ga0307406_10053177 3300031901 Bacteria 2579
61 Ga0307407_10020844 3300031903 Bacteria 3367
62 Ga0307407_10057986 3300031903 Bacteria 2249
63 Ga0307412_10079007 3300031911 Bacteria 2268
64 Ga0307412_10188697 3300031911 Bacteria 1557
65 Ga0307409_100000927 3300031995 Bacteria 13640
66 Ga0307409_100007750 3300031995 Bacteria 6455
67 Ga0307409_100020091 3300031995 Bacteria 4543
68 Ga0307409_100037384 3300031995 Bacteria 3579
69 Ga0307416_100036854 3300032002 Bacteria 3756
70 Ga0307416_100090408 3300032002 Bacteria 2625
71 Ga0307415_100037896 3300032126 Bacteria 3173
72 Ga0307415_100039936 3300032126 Bacteria 3105
73 Ga0395899_0227392 3300037312 Bacteria 1290
74 Ga0395898_0072704 3300037466 Bacteria 3322
75 Ga0395898_0105276 3300037466 Bacteria 2705
76 Ga0395898_0248844 3300037466 Bacteria 1695
77 Ga0395905_0034328 3300037471 Bacteria 4763
78 Ga0436364_0516168 3300037853 Bacteria 4792
79 Ga0395901_0024637 3300038443 Bacteria 6179
80 Ga0395901_0034683 3300038443 Bacteria 5212
81 Ga0395901_0400334 3300038443 Bacteria 1410
82 Ga0439450_017294 3300042008 Bacteria 1502
83 Ga0439455_0002702 3300042012 Bacteria 3273
84 Ga0439463_000409 3300042016 Bacteria 11919
85 Ga0439463_013150 3300042016 Bacteria 2036
86 Ga0439463_016483 3300042016 Bacteria 1827
87 Ga0439464_0003322 3300042439 Bacteria 4049
88 Ga0439460_0000612 3300042461 Bacteria 7870
89 Ga0439460_0013957 3300042461 Bacteria 2108
90 Ga0439440_0000072 3300042993 Bacteria 12514
91 Ga0466965_0001856 3300044683 Bacteria 8786
92 Ga0466966_0019339 3300044684 Bacteria 4482
93 Ga0466959_0104913 3300045049 Bacteria 2021
94 Ga0451576_0166774 3300045051 Bacteria 2298
95 Ga0495650_0000398 3300046471 Bacteria 72672
96 Ga0495580_0218766 3300046472 Bacteria 1309
97 Ga0495634_0102550 3300046642 Unclassified 1848
98 Ga0495684_0059326 3300047471 Bacteria 2914
99 Ga0501031_0011379 3300049568 Bacteria 5795
100 Ga0501031_0023481 3300049568 Bacteria 4020
101 Ga0501031_0150976 3300049568 Bacteria 1518
102 Ga0501032_0019478 3300049569 Bacteria 4746
103 Ga0501033_0010913 3300049570 Bacteria 6963
104 Ga0501036_0001295 3300049572 Bacteria 19154
105 Ga0501036_0015966 3300049572 Bacteria 6272
106 Ga0501036_0072693 3300049572 Bacteria 2907
107 Ga0501037_0024838 3300049573 Bacteria 4430
108 Ga0501038_0011458 3300049574 Bacteria 8089
109 Ga0501038_0017057 3300049574 Bacteria 6568
110 Ga0501039_0002130 3300049575 Bacteria 14647
111 Ga0501039_0008056 3300049575 Bacteria 8027
112 Ga0501040_0001838 3300049576 Bacteria 13640
113 Ga0501040_0063620 3300049576 Bacteria 2539
114 Ga0501041_0080218 3300049577 Bacteria 2009
115 Ga0501041_0131150 3300049577 Unclassified 1561
116 Ga0501041_0139516 3300049577 Bacteria 1511
117 Ga0501042_0001161 3300049578 Bacteria 15241
118 Ga0501042_0011667 3300049578 Bacteria 5937
119 Ga0501042_0023708 3300049578 Bacteria 4297
120 Ga0501042_0106777 3300049578 Bacteria 2015
121 Ga0501043_0072394 3300049579 Bacteria 2707
122 Ga0501046_0001123 3300049580 Bacteria 26164
123 Ga0501046_0013482 3300049580 Bacteria 6919
124 Ga0501048_0001855 3300049582 Bacteria 16039
125 Ga0501048_0014455 3300049582 Bacteria 5844
126 Ga0501068_0002533 3300049584 Bacteria 9702
127 Ga0501070_0050663 3300049586 Bacteria 3446
128 Ga0501071_0001106 3300049587 Bacteria 15039
129 Ga0501071_0027386 3300049587 Bacteria 4009
130 Ga0501071_0030273 3300049587 Bacteria 3828
131 Ga0501072_0004188 3300049588 Bacteria 10930
132 Ga0501072_0039126 3300049588 Bacteria 3724
133 Ga0501072_0084751 3300049588 Bacteria 2513
134 Ga0501072_0201967 3300049588 Bacteria 1585
135 Ga0501073_0255880 3300049589 Unclassified 1209
136 Ga0501074_0004119 3300049590 Bacteria 10376
137 Ga0501074_0026023 3300049590 Bacteria 4243
138 Ga0501074_0085114 3300049590 Bacteria 2266
139 Ga0501074_0092352 3300049590 Bacteria 2168
140 Ga0501075_0003483 3300049591 Bacteria 10524
141 Ga0501075_0005212 3300049591 Bacteria 8889
142 Ga0501075_0051198 3300049591 Bacteria 3105
143 Ga0501075_0089632 3300049591 Bacteria 2332
144 Ga0501076_0001757 3300049592 Bacteria 14651
145 Ga0501076_0086210 3300049592 Bacteria 2524
146 Ga0501077_0002194 3300049593 Bacteria 11791
147 Ga0501077_0036852 3300049593 Bacteria 3116
148 Ga0501077_0077423 3300049593 Bacteria 2107
149 Ga0501079_0001200 3300049741 Bacteria 18170
150 Ga0501079_0013294 3300049741 Bacteria 6276
151 Ga0501079_0039999 3300049741 Bacteria 3617
152 Ga0501081_0003032 3300049743 Bacteria 10657
153 Ga0501081_0026789 3300049743 Bacteria 3889
154 Ga0501081_0214640 3300049743 Unclassified 1398
155 Ga0501035_0015254 3300049822 Bacteria 7091
156 Ga0501044_0264371 3300049823 Bacteria 1658
157 Ga0501045_0002612 3300049824 Bacteria 12270
158 Ga0501045_0014320 3300049824 Bacteria 5619
159 Ga0501045_0014640 3300049824 Bacteria 5561
160 Ga0501045_0017333 3300049824 Bacteria 5112
161 nmdc:mga0yw44_14658_c1 3300050492 Bacteria 4170
162 nmdc:mga05p37_25050_c1 3300050507 Bacteria 7253
163 nmdc:mga05p37_4299_c1 3300050507 Bacteria 16632
164 nmdc:mga09592_228537_c1 3300050508 Bacteria 1612
165 nmdc:mga06r32_120208_c1 3300050510 Bacteria 2591
166 nmdc:mga08y16_175329_c1 3300050511 Bacteria 2226
167 nmdc:mga08y16_17928_c1 3300050511 Bacteria 7459
168 nmdc:mga08y16_455826_c1 3300050511 Bacteria 1304
169 nmdc:mga08y16_97279_c1 3300050511 Bacteria 3066
170 nmdc:mga0rr50_44885_c1 3300050513 Bacteria 3244
171 nmdc:mga0a205_42945_c1 3300050515 Bacteria 4358
172 Ga0501084_0003631 3300054114 Bacteria 12529
173 Ga0501084_0021306 3300054114 Bacteria 5403
174 Ga0501084_0081623 3300054114 Bacteria 2712
175 Ga0501084_0108638 3300054114 Bacteria 2330
176 Ga0501082_0000317 3300060353 Bacteria 43053
177 Ga0501082_0194581 3300060353 Bacteria 1764
178 Ga0530510_0001569 3300061734 Bacteria 15406
179 JGI25406J46586_10002777
180 JGI25407J50210_10003352
181 JGI25407J50210_10018085
182 JGI25407J50210_10027346
183 Ga0070710_10000307
184 Ga0070700_100042012
185 Ga0070678_100340843
186 Ga0070698_100000511
187 Ga0070698_100002884
188 Ga0070698_100258158
189 Ga0070699_100000203
190 Ga0070672_100080028
191 Ga0068859_100206472
192 Ga0081455_10010265
193 Ga0081538_10000621
194 Ga0081538_10004317
195 Ga0081538_10004705
196 Ga0081538_10007197
197 Ga0081538_10008463
198 Ga0081538_10012337
199 Ga0081538_10018832
200 Ga0081538_10034904
201 Ga0081539_10001939
202 Ga0081539_10043418
203 Ga0081539_10046763
204 Ga0075365_10085672
205 Ga0075427_10006677
206 Ga0075428_100055949
207 Ga0075428_100108906
208 Ga0075428_100289946
209 Ga0075430_100003781
210 Ga0075430_100010541
211 Ga0075431_100057323
212 Ga0075431_100187820
213 Ga0075429_100010679
214 Ga0075429_100011353
215 Ga0097620_100206474
216 Ga0111539_10003277
217 Ga0111539_10013656
218 Ga0111539_10077501
219 Ga0111539_10087265
220 Ga0111539_10425836
221 Ga0105245_10000636
222 Ga0114129_10049109
223 Ga0105243_10277577
224 Ga0163163_10012192
225 Ga0213875_10011164
226 Ga0207692_10001060
227 Ga0207687_10001268
228 Ga0207691_10096939
229 Ga0207661_10173857
230 Ga0207668_10085417
231 Ga0207708_10028972
232 Ga0207648_10070082
233 Ga0207675_100064156
234 Ga0207428_10001710
235 Ga0307410_10007427
236 Ga0307410_10016282
237 Ga0307406_10044507
238 Ga0307406_10053177
239 Ga0307407_10020844
240 Ga0307407_10057986
241 Ga0307412_10079007
242 Ga0307412_10188697
243 Ga0307409_100000927
244 Ga0307409_100007750
245 Ga0307409_100020091
246 Ga0307409_100037384
247 Ga0307416_100036854
248 Ga0307416_100090408
249 Ga0307415_100037896
250 Ga0307415_100039936
251 Ga0395899_0227392
252 Ga0395898_0072704
253 Ga0395898_0105276
254 Ga0395898_0248844
255 Ga0395905_0034328
256 Ga0436364_0516168
257 Ga0395901_0024637
258 Ga0395901_0034683
259 Ga0395901_0400334
260 Ga0439450_017294
261 Ga0439455_0002702
262 Ga0439463_000409
263 Ga0439463_013150
264 Ga0439463_016483
265 Ga0439464_0003322
266 Ga0439460_0000612
267 Ga0439460_0013957
268 Ga0439440_0000072
269 Ga0466965_0001856
270 Ga0466966_0019339
271 Ga0466959_0104913
272 Ga0451576_0166774
273 Ga0495650_0000398
274 Ga0495580_0218766
275 Ga0495634_0102550
276 Ga0495684_0059326
277 Ga0501031_0011379
278 Ga0501031_0023481
279 Ga0501031_0150976
280 Ga0501032_0019478
281 Ga0501033_0010913
282 Ga0501036_0001295
283 Ga0501036_0015966
284 Ga0501036_0072693
285 Ga0501037_0024838
286 Ga0501038_0011458
287 Ga0501038_0017057
288 Ga0501039_0002130
289 Ga0501039_0008056
290 Ga0501040_0001838
291 Ga0501040_0063620
292 Ga0501041_0080218
293 Ga0501041_0131150
294 Ga0501041_0139516
295 Ga0501042_0001161
296 Ga0501042_0011667
297 Ga0501042_0023708
298 Ga0501042_0106777
299 Ga0501043_0072394
300 Ga0501046_0001123
301 Ga0501046_0013482
302 Ga0501048_0001855
303 Ga0501048_0014455
304 Ga0501068_0002533
305 Ga0501070_0050663
306 Ga0501071_0001106
307 Ga0501071_0027386
308 Ga0501071_0030273
309 Ga0501072_0004188
310 Ga0501072_0039126
311 Ga0501072_0084751
312 Ga0501072_0201967
313 Ga0501073_0255880
314 Ga0501074_0004119
315 Ga0501074_0026023
316 Ga0501074_0085114
317 Ga0501074_0092352
318 Ga0501075_0003483
319 Ga0501075_0005212
320 Ga0501075_0051198
321 Ga0501075_0089632
322 Ga0501076_0001757
323 Ga0501076_0086210
324 Ga0501077_0002194
325 Ga0501077_0036852
326 Ga0501077_0077423
327 Ga0501079_0001200
328 Ga0501079_0013294
329 Ga0501079_0039999
330 Ga0501081_0003032
331 Ga0501081_0026789
332 Ga0501081_0214640
333 Ga0501035_0015254
334 Ga0501044_0264371
335 Ga0501045_0002612
336 Ga0501045_0014320
337 Ga0501045_0014640
338 Ga0501045_0017333
339 nmdc:mga0yw44_14658_c1
340 nmdc:mga05p37_25050_c1
341 nmdc:mga05p37_4299_c1
342 nmdc:mga09592_228537_c1
343 nmdc:mga06r32_120208_c1
344 nmdc:mga08y16_175329_c1
345 nmdc:mga08y16_17928_c1
346 nmdc:mga08y16_455826_c1
347 nmdc:mga08y16_97279_c1
348 nmdc:mga0rr50_44885_c1
349 nmdc:mga0a205_42945_c1
350 Ga0501084_0003631
351 Ga0501084_0021306
352 Ga0501084_0081623
353 Ga0501084_0108638
354 Ga0501082_0000317
355 Ga0501082_0194581
356 Ga0530510_0001569

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06224

AlkZ-like

DNA glycosylase AlkZ-like

37

370

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5uuj-assembly1.cif.gz_A streptomyces sahachiroi dna glycosylase alkz 0.9055 8 380
5uuj-assembly1.cif.gz_A streptomyces sahachiroi dna glycosylase alkz 0.9009 8 380
1jg0-assembly1.cif.gz_B crystal structure of escherichia coli thymidylate synthase complexed with 2'-deoxyuridine-5'-monophosphate and n,o-didansyl-l-tyrosine 0.7785 332 379
2l4m-assembly1.cif.gz_A solution structure of the zbeta domain of human dai and its binding modes to b- and z-dna 0.7682 209 264
5v89-assembly2.cif.gz_C structure of dcn4 pony domain bound to cul1 whb 0.7661 122 161
ID Description Score Start End Superfamily
af_Q9H171_100_167_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8369 206 264 1.10.10.10
af_Q93VL5_662_746_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.787 122 160 1.10.10.10
2l4mA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7682 209 264 1.10.10.10
5v89C00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7661 122 161 1.10.10.10
af_P77569_1_73_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7655 201 264 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A495XJU3-F1-model_v4 Winged helix DNA-binding protein 0.9835 8 381 GO:0003677
AF-A0A1Q4YIQ9-F1-model_v4 Winged helix DNA-binding domain-containing protein 0.9822 9 380
AF-A0A7K0A1H0-F1-model_v4 Winged helix DNA-binding domain-containing protein 0.9799 3 382
AF-A0A495XJU3-F1-model_v4 Winged helix DNA-binding protein 0.9781 8 381 GO:0003677
AF-A0A1Q4YIQ9-F1-model_v4 Winged helix DNA-binding domain-containing protein 0.9769 9 380

Map