F270700
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 177 | 110 | 354 | 274 |
Family's Representative Sequence
| Representative Sequence | 3300045049|Ga0466959_0148532|Ga0466959_0148532_479_1417 |
| Length | 312 |
| Sequence | VRQYLDAGKAAPRLTTLINFAGPAQGVSGYARSVDAPIGIFDSGVGGLTVARAVLDQLPHEPIVYVGDTAHSPYGPRPIAEVRSLALDVLDQLVETHQVKMLVIACNAASSACLRDARERYAPTPVVEVIHPAVRRAVAATRNGKIGVLGTQVTIGSRSYDDAFAAAPHIELTTAACPRFVEFVEAGETWGNELLAAAEEYLAPILEAGCDTVVLGCTHYPLLTGVISYVLGDEVTLVSSAEETAKDVFRELARARSFRDEMLPSPQHRFLATGDPEPFERLGRRFLGPEIGEVARAERSPALLGPTAGVLS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 4 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 11 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 15 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 16 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 17 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 26 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 28 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 29 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 30 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 31 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 32 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 47 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 48 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 49 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 50 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 51 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 52 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 53 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 54 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 55 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 56 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 57 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 58 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 59 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 60 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 61 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 62 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 63 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 64 | 3300042126 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 | Metagenome | Rhizosphere |
| 65 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 66 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 67 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 68 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 69 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 70 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 71 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 72 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 73 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 74 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 75 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 76 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 88 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 89 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 90 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 91 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 92 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 93 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 94 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 95 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 96 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 97 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 101 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 102 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 103 | 2515154155 | Actinopolymorpha alba DSM 45243 | Isolate | Rhizosphere |
| 104 | 2675903058 | Actinopolymorpha cephalotaxi CPCC 202808 | Isolate | Rhizosphere |
| 105 | 2731639228 | Motilibacter peucedani DSM 45328 | Isolate | Rhizosphere |
| 106 | 2827628540 | Actinopolymorpha cephalotaxi DSM 45117 | Isolate | Rhizosphere |
| 107 | 2837268691 | Jiangella endophytica KE2-3 | Isolate | Rhizosphere |
| 108 | 2862993130 | Planctomonas deserti 13S1-3 v2 | Isolate | Rhizosphere |
| 109 | 2868088558 | Phytoactinopolyspora endophytica EGI 60009 | Isolate | Unclassified |
| 110 | 2964326757 | Planctomonas psychrotolerans J5903 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 91.53 |
| Metatranscriptomes | 3.95 |
| Isolates | 4.52 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 2.26 |
| Rhizosphere | 93.79 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0466959_0148532 | 3300045049 | Bacteria | 1653 |
| 2 | Ga0070658_10000173 | 3300005327 | Bacteria | 56301 |
| 3 | Ga0070658_10006744 | 3300005327 | Bacteria | 9295 |
| 4 | Ga0070690_100033490 | 3300005330 | Bacteria | 3217 |
| 5 | Ga0070680_100000200 | 3300005336 | Bacteria | 39048 |
| 6 | Ga0070680_100000203 | 3300005336 | Bacteria | 38799 |
| 7 | Ga0070680_100126888 | 3300005336 | Bacteria | 2132 |
| 8 | Ga0070680_100282687 | 3300005336 | Bacteria | 1406 |
| 9 | Ga0070682_100150367 | 3300005337 | Bacteria | 1597 |
| 10 | Ga0068868_100007321 | 3300005338 | Bacteria | 7857 |
| 11 | Ga0070660_100362256 | 3300005339 | Bacteria | 1195 |
| 12 | Ga0070659_100000961 | 3300005366 | Bacteria | 21195 |
| 13 | Ga0070659_100019628 | 3300005366 | Bacteria | 5126 |
| 14 | Ga0070714_100016857 | 3300005435 | Bacteria | 5909 |
| 15 | Ga0070681_10000052 | 3300005458 | Bacteria | 81490 |
| 16 | Ga0070681_10096199 | 3300005458 | Bacteria | 2909 |
| 17 | Ga0070681_10183577 | 3300005458 | Bacteria | 2013 |
| 18 | Ga0070681_10210599 | 3300005458 | Bacteria | 1860 |
| 19 | Ga0070679_100000018 | 3300005530 | Bacteria | 127592 |
| 20 | Ga0070679_100002171 | 3300005530 | Bacteria | 17704 |
| 21 | Ga0070679_100008712 | 3300005530 | Bacteria | 9564 |
| 22 | Ga0070679_100104289 | 3300005530 | Bacteria | 2822 |
| 23 | Ga0070684_100097645 | 3300005535 | Bacteria | 2620 |
| 24 | Ga0070696_100009734 | 3300005546 | Bacteria | 6430 |
| 25 | Ga0068859_100014066 | 3300005617 | Bacteria | 8025 |
| 26 | Ga0068862_100084735 | 3300005844 | Bacteria | 2754 |
| 27 | Ga0081539_10011165 | 3300005985 | Bacteria | 7158 |
| 28 | Ga0070717_10058900 | 3300006028 | Bacteria | 3177 |
| 29 | Ga0097620_100014066 | 3300006931 | Bacteria | 8025 |
| 30 | Ga0105241_10433004 | 3300009174 | Bacteria | 1160 |
| 31 | Ga0105242_10070654 | 3300009176 | Bacteria | 2895 |
| 32 | Ga0105237_10065847 | 3300009545 | Bacteria | 3618 |
| 33 | Ga0157371_10010974 | 3300013102 | Bacteria | 7021 |
| 34 | Ga0157369_10000717 | 3300013105 | Bacteria | 42638 |
| 35 | Ga0157369_10001466 | 3300013105 | Bacteria | 28924 |
| 36 | Ga0157369_10004804 | 3300013105 | Bacteria | 15874 |
| 37 | Ga0157369_10082653 | 3300013105 | Bacteria | 3436 |
| 38 | Ga0157369_10119320 | 3300013105 | Bacteria | 2799 |
| 39 | Ga0157369_10521166 | 3300013105 | Bacteria | 1229 |
| 40 | Ga0157374_10483450 | 3300013296 | Bacteria | 1242 |
| 41 | Ga0157372_10148051 | 3300013307 | Bacteria | 2708 |
| 42 | Ga0157375_10039873 | 3300013308 | Bacteria | 4522 |
| 43 | Ga0206356_11133682 | 3300020070 | Bacteria | 2220 |
| 44 | Ga0206356_11385875 | 3300020070 | Bacteria | 1499 |
| 45 | Ga0206354_11178735 | 3300020081 | Bacteria | 1141 |
| 46 | Ga0206353_10374181 | 3300020082 | Bacteria | 26595 |
| 47 | Ga0206353_11584346 | 3300020082 | Bacteria | 2845 |
| 48 | Ga0213876_10000640 | 3300021384 | Bacteria | 25381 |
| 49 | Ga0224712_10010115 | 3300022467 | Bacteria | 2871 |
| 50 | Ga0224712_10014648 | 3300022467 | Bacteria | 2531 |
| 51 | Ga0207705_10000994 | 3300025909 | Bacteria | 23118 |
| 52 | Ga0207705_10009909 | 3300025909 | Bacteria | 6938 |
| 53 | Ga0207705_10299432 | 3300025909 | Bacteria | 1233 |
| 54 | Ga0207707_10000384 | 3300025912 | Bacteria | 46040 |
| 55 | Ga0207707_10007067 | 3300025912 | Bacteria | 9786 |
| 56 | Ga0207707_10179652 | 3300025912 | Bacteria | 1848 |
| 57 | Ga0207671_10042937 | 3300025914 | Bacteria | 3344 |
| 58 | Ga0207693_10051320 | 3300025915 | Bacteria | 3237 |
| 59 | Ga0207663_10177319 | 3300025916 | Bacteria | 1519 |
| 60 | Ga0207660_10000175 | 3300025917 | Bacteria | 41005 |
| 61 | Ga0207660_10001151 | 3300025917 | Bacteria | 17647 |
| 62 | Ga0207660_10087188 | 3300025917 | Bacteria | 2306 |
| 63 | Ga0207657_10042916 | 3300025919 | Bacteria | 3987 |
| 64 | Ga0207657_10076397 | 3300025919 | Bacteria | 2825 |
| 65 | Ga0207652_10000237 | 3300025921 | Bacteria | 57585 |
| 66 | Ga0207652_10000293 | 3300025921 | Bacteria | 51659 |
| 67 | Ga0207652_10021117 | 3300025921 | Bacteria | 5371 |
| 68 | Ga0207652_10305671 | 3300025921 | Bacteria | 1435 |
| 69 | Ga0207664_10268988 | 3300025929 | Bacteria | 1492 |
| 70 | Ga0207690_10004599 | 3300025932 | Bacteria | 8159 |
| 71 | Ga0207689_10028605 | 3300025942 | Bacteria | 4661 |
| 72 | Ga0207677_10025438 | 3300026023 | Bacteria | 3694 |
| 73 | Ga0207683_10034757 | 3300026121 | Bacteria | 4382 |
| 74 | Ga0268265_10076905 | 3300028380 | Bacteria | 2620 |
| 75 | Ga0307517_10105464 | 3300028786 | Bacteria | 2186 |
| 76 | Ga0307511_10071865 | 3300030521 | Bacteria | 2519 |
| 77 | Ga0265330_10120731 | 3300031235 | Bacteria | 1117 |
| 78 | Ga0265325_10003284 | 3300031241 | Bacteria | 10634 |
| 79 | Ga0265339_10027444 | 3300031249 | Bacteria | 3250 |
| 80 | Ga0265316_10028982 | 3300031344 | Bacteria | 4559 |
| 81 | Ga0307509_10011353 | 3300031507 | Bacteria | 10800 |
| 82 | Ga0265313_10131624 | 3300031595 | Bacteria | 1083 |
| 83 | Ga0307508_10026677 | 3300031616 | Bacteria | 5236 |
| 84 | Ga0316579_10000651 | 3300031691 | Bacteria | 11780 |
| 85 | Ga0265342_10024162 | 3300031712 | Bacteria | 3838 |
| 86 | Ga0316576_10081686 | 3300031727 | Bacteria | 2399 |
| 87 | Ga0307405_10227861 | 3300031731 | Bacteria | 1372 |
| 88 | Ga0307415_100184250 | 3300032126 | Bacteria | 1641 |
| 89 | Ga0307507_10000013 | 3300033179 | Bacteria | 242708 |
| 90 | Ga0316574_0098388 | 3300035398 | Bacteria | 1871 |
| 91 | Ga0395901_0002044 | 3300038443 | Bacteria | 20697 |
| 92 | Ga0395901_0116955 | 3300038443 | Bacteria | 2801 |
| 93 | Ga0439448_0092627 | 3300042005 | Bacteria | 1022 |
| 94 | Ga0450888_004573 | 3300042126 | Bacteria | 1450 |
| 95 | Ga0439458_0054441 | 3300042157 | Bacteria | 991 |
| 96 | Ga0466969_0004349 | 3300044656 | Bacteria | 7540 |
| 97 | Ga0466966_0005286 | 3300044684 | Bacteria | 8489 |
| 98 | Ga0466966_0006134 | 3300044684 | Bacteria | 7942 |
| 99 | Ga0466966_0013199 | 3300044684 | Bacteria | 5471 |
| 100 | Ga0466966_0022831 | 3300044684 | Bacteria | 4101 |
| 101 | Ga0466961_0000420 | 3300044693 | Bacteria | 27093 |
| 102 | Ga0466961_0001231 | 3300044693 | Bacteria | 15762 |
| 103 | Ga0466961_0024143 | 3300044693 | Bacteria | 3911 |
| 104 | Ga0466961_0065629 | 3300044693 | Bacteria | 2307 |
| 105 | Ga0466961_0083067 | 3300044693 | Bacteria | 2026 |
| 106 | Ga0466961_0092653 | 3300044693 | Bacteria | 1907 |
| 107 | Ga0466961_0104687 | 3300044693 | Bacteria | 1782 |
| 108 | Ga0466961_0109165 | 3300044693 | Bacteria | 1741 |
| 109 | Ga0466961_0148103 | 3300044693 | Bacteria | 1467 |
| 110 | Ga0466963_0031398 | 3300044694 | Bacteria | 3434 |
| 111 | Ga0466963_0065778 | 3300044694 | Bacteria | 2431 |
| 112 | Ga0466963_0143031 | 3300044694 | Bacteria | 1658 |
| 113 | Ga0466963_0224705 | 3300044694 | Bacteria | 1315 |
| 114 | Ga0466964_0041644 | 3300044706 | Bacteria | 1859 |
| 115 | Ga0466971_0000656 | 3300044719 | Bacteria | 13733 |
| 116 | Ga0466971_0001124 | 3300044719 | Bacteria | 11127 |
| 117 | Ga0466971_0028507 | 3300044719 | Bacteria | 2498 |
| 118 | Ga0466971_0030013 | 3300044719 | Bacteria | 2432 |
| 119 | Ga0466957_0050524 | 3300044842 | Bacteria | 2530 |
| 120 | Ga0466957_0156074 | 3300044842 | Bacteria | 1479 |
| 121 | Ga0466960_0195841 | 3300044901 | Bacteria | 1102 |
| 122 | Ga0466959_0001675 | 3300045049 | Bacteria | 13724 |
| 123 | Ga0466959_0003443 | 3300045049 | Bacteria | 10355 |
| 124 | Ga0466959_0371183 | 3300045049 | Bacteria | 974 |
| 125 | Ga0466958_0001592 | 3300045836 | Bacteria | 10901 |
| 126 | Ga0466958_0007930 | 3300045836 | Bacteria | 5868 |
| 127 | Ga0466958_0016408 | 3300045836 | Bacteria | 4264 |
| 128 | Ga0466958_0025636 | 3300045836 | Bacteria | 3478 |
| 129 | Ga0466958_0087994 | 3300045836 | Bacteria | 1919 |
| 130 | Ga0466967_0086021 | 3300045976 | Bacteria | 2848 |
| 131 | Ga0466967_0100195 | 3300045976 | Bacteria | 2647 |
| 132 | Ga0466967_0199809 | 3300045976 | Bacteria | 1893 |
| 133 | Ga0466967_0229763 | 3300045976 | Bacteria | 1766 |
| 134 | Ga0495592_0006722 | 3300046454 | Bacteria | 8580 |
| 135 | Ga0495629_0209240 | 3300046459 | Bacteria | 1347 |
| 136 | Ga0495651_0006334 | 3300046462 | Bacteria | 9053 |
| 137 | Ga0495628_0009532 | 3300046516 | Bacteria | 8289 |
| 138 | Ga0495642_0116169 | 3300046528 | Bacteria | 1147 |
| 139 | Ga0495587_0074156 | 3300046536 | Bacteria | 1976 |
| 140 | Ga0495667_0053387 | 3300046559 | Bacteria | 2662 |
| 141 | Ga0495646_0059075 | 3300046680 | Bacteria | 2291 |
| 142 | Ga0495658_0116815 | 3300046683 | Bacteria | 1609 |
| 143 | Ga0495600_0030508 | 3300046809 | Bacteria | 3492 |
| 144 | Ga0495581_0039084 | 3300047315 | Bacteria | 2747 |
| 145 | Ga0496104_0369574 | 3300048907 | Bacteria | 1347 |
| 146 | Ga0496104_0472694 | 3300048907 | Bacteria | 1165 |
| 147 | Ga0496108_0488946 | 3300048911 | Bacteria | 1075 |
| 148 | Ga0496115_0230791 | 3300048918 | Bacteria | 1526 |
| 149 | Ga0501034_0289610 | 3300049571 | Bacteria | 1576 |
| 150 | Ga0501070_0001232 | 3300049586 | Bacteria | 22919 |
| 151 | Ga0501070_0007897 | 3300049586 | Bacteria | 9013 |
| 152 | Ga0501070_0011595 | 3300049586 | Bacteria | 7442 |
| 153 | Ga0501072_0061637 | 3300049588 | Bacteria | 2959 |
| 154 | Ga0501074_0004150 | 3300049590 | Bacteria | 10341 |
| 155 | Ga0501079_0001189 | 3300049741 | Bacteria | 18236 |
| 156 | Ga0501080_0000682 | 3300049742 | Bacteria | 27112 |
| 157 | Ga0501080_0001126 | 3300049742 | Bacteria | 21986 |
| 158 | Ga0501080_0012596 | 3300049742 | Bacteria | 7755 |
| 159 | Ga0501044_0002913 | 3300049823 | Bacteria | 19484 |
| 160 | Ga0495601_0015704 | 3300053077 | Bacteria | 4579 |
| 161 | Ga0495612_0011710 | 3300053078 | Bacteria | 3535 |
| 162 | Ga0495612_0019319 | 3300053078 | Bacteria | 2729 |
| 163 | Ga0495612_0115002 | 3300053078 | Bacteria | 1154 |
| 164 | Ga0501084_0112564 | 3300054114 | Bacteria | 2287 |
| 165 | Ga0501082_0354665 | 3300060353 | Bacteria | 1279 |
| 166 | Ga0466962_0004501 | 3300061719 | Bacteria | 6681 |
| 167 | Ga0466962_0005236 | 3300061719 | Bacteria | 6232 |
| 168 | Ga0466962_0011487 | 3300061719 | Bacteria | 4264 |
| 169 | Ga0530510_0042427 | 3300061734 | Bacteria | 3287 |
| 170 | 2515852892 | 2515154155 | Bacteria | 7985436 |
| 171 | 2676473220 | 2675903058 | Bacteria | 6822861 |
| 172 | 2731908506 | 2731639228 | Bacteria | 4187555 |
| 173 | 2827631818 | 2827628540 | Bacteria | 6858585 |
| 174 | 2837272253 | 2837268691 | Bacteria | 7850704 |
| 175 | 2862995343 | 2862993130 | Bacteria | 3860849 |
| 176 | 2868092929 | 2868088558 | Bacteria | 7609351 |
| 177 | 2964329026 | 2964326757 | Bacteria | 3290868 |
| 178 | Ga0466959_0148532 | |||
| 179 | Ga0070658_10000173 | |||
| 180 | Ga0070658_10006744 | |||
| 181 | Ga0070690_100033490 | |||
| 182 | Ga0070680_100000200 | |||
| 183 | Ga0070680_100000203 | |||
| 184 | Ga0070680_100126888 | |||
| 185 | Ga0070680_100282687 | |||
| 186 | Ga0070682_100150367 | |||
| 187 | Ga0068868_100007321 | |||
| 188 | Ga0070660_100362256 | |||
| 189 | Ga0070659_100000961 | |||
| 190 | Ga0070659_100019628 | |||
| 191 | Ga0070714_100016857 | |||
| 192 | Ga0070681_10000052 | |||
| 193 | Ga0070681_10096199 | |||
| 194 | Ga0070681_10183577 | |||
| 195 | Ga0070681_10210599 | |||
| 196 | Ga0070679_100000018 | |||
| 197 | Ga0070679_100002171 | |||
| 198 | Ga0070679_100008712 | |||
| 199 | Ga0070679_100104289 | |||
| 200 | Ga0070684_100097645 | |||
| 201 | Ga0070696_100009734 | |||
| 202 | Ga0068859_100014066 | |||
| 203 | Ga0068862_100084735 | |||
| 204 | Ga0081539_10011165 | |||
| 205 | Ga0070717_10058900 | |||
| 206 | Ga0097620_100014066 | |||
| 207 | Ga0105241_10433004 | |||
| 208 | Ga0105242_10070654 | |||
| 209 | Ga0105237_10065847 | |||
| 210 | Ga0157371_10010974 | |||
| 211 | Ga0157369_10000717 | |||
| 212 | Ga0157369_10001466 | |||
| 213 | Ga0157369_10004804 | |||
| 214 | Ga0157369_10082653 | |||
| 215 | Ga0157369_10119320 | |||
| 216 | Ga0157369_10521166 | |||
| 217 | Ga0157374_10483450 | |||
| 218 | Ga0157372_10148051 | |||
| 219 | Ga0157375_10039873 | |||
| 220 | Ga0206356_11133682 | |||
| 221 | Ga0206356_11385875 | |||
| 222 | Ga0206354_11178735 | |||
| 223 | Ga0206353_10374181 | |||
| 224 | Ga0206353_11584346 | |||
| 225 | Ga0213876_10000640 | |||
| 226 | Ga0224712_10010115 | |||
| 227 | Ga0224712_10014648 | |||
| 228 | Ga0207705_10000994 | |||
| 229 | Ga0207705_10009909 | |||
| 230 | Ga0207705_10299432 | |||
| 231 | Ga0207707_10000384 | |||
| 232 | Ga0207707_10007067 | |||
| 233 | Ga0207707_10179652 | |||
| 234 | Ga0207671_10042937 | |||
| 235 | Ga0207693_10051320 | |||
| 236 | Ga0207663_10177319 | |||
| 237 | Ga0207660_10000175 | |||
| 238 | Ga0207660_10001151 | |||
| 239 | Ga0207660_10087188 | |||
| 240 | Ga0207657_10042916 | |||
| 241 | Ga0207657_10076397 | |||
| 242 | Ga0207652_10000237 | |||
| 243 | Ga0207652_10000293 | |||
| 244 | Ga0207652_10021117 | |||
| 245 | Ga0207652_10305671 | |||
| 246 | Ga0207664_10268988 | |||
| 247 | Ga0207690_10004599 | |||
| 248 | Ga0207689_10028605 | |||
| 249 | Ga0207677_10025438 | |||
| 250 | Ga0207683_10034757 | |||
| 251 | Ga0268265_10076905 | |||
| 252 | Ga0307517_10105464 | |||
| 253 | Ga0307511_10071865 | |||
| 254 | Ga0265330_10120731 | |||
| 255 | Ga0265325_10003284 | |||
| 256 | Ga0265339_10027444 | |||
| 257 | Ga0265316_10028982 | |||
| 258 | Ga0307509_10011353 | |||
| 259 | Ga0265313_10131624 | |||
| 260 | Ga0307508_10026677 | |||
| 261 | Ga0316579_10000651 | |||
| 262 | Ga0265342_10024162 | |||
| 263 | Ga0316576_10081686 | |||
| 264 | Ga0307405_10227861 | |||
| 265 | Ga0307415_100184250 | |||
| 266 | Ga0307507_10000013 | |||
| 267 | Ga0316574_0098388 | |||
| 268 | Ga0395901_0002044 | |||
| 269 | Ga0395901_0116955 | |||
| 270 | Ga0439448_0092627 | |||
| 271 | Ga0450888_004573 | |||
| 272 | Ga0439458_0054441 | |||
| 273 | Ga0466969_0004349 | |||
| 274 | Ga0466966_0005286 | |||
| 275 | Ga0466966_0006134 | |||
| 276 | Ga0466966_0013199 | |||
| 277 | Ga0466966_0022831 | |||
| 278 | Ga0466961_0000420 | |||
| 279 | Ga0466961_0001231 | |||
| 280 | Ga0466961_0024143 | |||
| 281 | Ga0466961_0065629 | |||
| 282 | Ga0466961_0083067 | |||
| 283 | Ga0466961_0092653 | |||
| 284 | Ga0466961_0104687 | |||
| 285 | Ga0466961_0109165 | |||
| 286 | Ga0466961_0148103 | |||
| 287 | Ga0466963_0031398 | |||
| 288 | Ga0466963_0065778 | |||
| 289 | Ga0466963_0143031 | |||
| 290 | Ga0466963_0224705 | |||
| 291 | Ga0466964_0041644 | |||
| 292 | Ga0466971_0000656 | |||
| 293 | Ga0466971_0001124 | |||
| 294 | Ga0466971_0028507 | |||
| 295 | Ga0466971_0030013 | |||
| 296 | Ga0466957_0050524 | |||
| 297 | Ga0466957_0156074 | |||
| 298 | Ga0466960_0195841 | |||
| 299 | Ga0466959_0001675 | |||
| 300 | Ga0466959_0003443 | |||
| 301 | Ga0466959_0371183 | |||
| 302 | Ga0466958_0001592 | |||
| 303 | Ga0466958_0007930 | |||
| 304 | Ga0466958_0016408 | |||
| 305 | Ga0466958_0025636 | |||
| 306 | Ga0466958_0087994 | |||
| 307 | Ga0466967_0086021 | |||
| 308 | Ga0466967_0100195 | |||
| 309 | Ga0466967_0199809 | |||
| 310 | Ga0466967_0229763 | |||
| 311 | Ga0495592_0006722 | |||
| 312 | Ga0495629_0209240 | |||
| 313 | Ga0495651_0006334 | |||
| 314 | Ga0495628_0009532 | |||
| 315 | Ga0495642_0116169 | |||
| 316 | Ga0495587_0074156 | |||
| 317 | Ga0495667_0053387 | |||
| 318 | Ga0495646_0059075 | |||
| 319 | Ga0495658_0116815 | |||
| 320 | Ga0495600_0030508 | |||
| 321 | Ga0495581_0039084 | |||
| 322 | Ga0496104_0369574 | |||
| 323 | Ga0496104_0472694 | |||
| 324 | Ga0496108_0488946 | |||
| 325 | Ga0496115_0230791 | |||
| 326 | Ga0501034_0289610 | |||
| 327 | Ga0501070_0001232 | |||
| 328 | Ga0501070_0007897 | |||
| 329 | Ga0501070_0011595 | |||
| 330 | Ga0501072_0061637 | |||
| 331 | Ga0501074_0004150 | |||
| 332 | Ga0501079_0001189 | |||
| 333 | Ga0501080_0000682 | |||
| 334 | Ga0501080_0001126 | |||
| 335 | Ga0501080_0012596 | |||
| 336 | Ga0501044_0002913 | |||
| 337 | Ga0495601_0015704 | |||
| 338 | Ga0495612_0011710 | |||
| 339 | Ga0495612_0019319 | |||
| 340 | Ga0495612_0115002 | |||
| 341 | Ga0501084_0112564 | |||
| 342 | Ga0501082_0354665 | |||
| 343 | Ga0466962_0004501 | |||
| 344 | Ga0466962_0005236 | |||
| 345 | Ga0466962_0011487 | |||
| 346 | Ga0530510_0042427 | |||
| 347 | 2515852892 | |||
| 348 | 2676473220 | |||
| 349 | 2731908506 | |||
| 350 | 2827631818 | |||
| 351 | 2837272253 | |||
| 352 | 2862995343 | |||
| 353 | 2868092929 | |||
| 354 | 2964329026 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5hj7-assembly1.cif.gz_A | glutamate racemase mycobacterium tuberculosis (muri) with bound d-glutamate, 2.3 angstrom resolution, x-ray diffraction | 0.9743 | 12 | 265 |
| 5hj7-assembly1.cif.gz_A | glutamate racemase mycobacterium tuberculosis (muri) with bound d-glutamate, 2.3 angstrom resolution, x-ray diffraction | 0.9631 | 12 | 265 |
| 5ijw-assembly1.cif.gz_A | glutamate racemase (muri) from mycobacterium smegmatis with bound d-glutamate, 1.8 angstrom resolution, x-ray diffraction | 0.958 | 12 | 267 |
| 2jfo-assembly1.cif.gz_B | crystal structure of enterococcus faecalis glutamate racemase in complex with d- and l-glutamate | 0.9528 | 12 | 278 |
| 2gzm-assembly1.cif.gz_A | crystal structure of the glutamate racemase from bacillus anthracis | 0.9525 | 12 | 274 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WPW9_6_95_3.40.50.1860 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9968 | 14 | 105 | 3.40.50.1860 |
| 5ijwB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9872 | 107 | 218 | 3.40.50.1860 |
| 5hj7A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9868 | 12 | 265 | 3.40.50.1860 |
| af_P9WPW9_6_95_3.40.50.1860 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9858 | 14 | 105 | 3.40.50.1860 |
| 5ijwB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9785 | 107 | 218 | 3.40.50.1860 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3C1DJ86-F1-model_v4 | Glutamate racemase (EC 5.1.1.3) | 0.9917 | 13 | 213 |
GO:0008360
GO:0008881 GO:0009252 GO:0071555 |
| AF-A0A838GQP0-F1-model_v4 | Glutamate racemase (EC 5.1.1.3) | 0.9916 | 13 | 223 |
GO:0008360
GO:0008881 GO:0009252 GO:0071555 |
| AF-A0A7K0XYP4-F1-model_v4 | deleted | 0.9869 | 13 | 219 |
|
| AF-A0A7V9ZIA6-F1-model_v4 | Glutamate racemase (EC 5.1.1.3) | 0.9868 | 12 | 274 |
GO:0008360
GO:0008881 GO:0009252 GO:0071555 |
| AF-A0A6J6CM83-F1-model_v4 | glutamate racemase (EC 5.1.1.3) | 0.9865 | 13 | 274 |
GO:0008360
GO:0008881 GO:0009252 GO:0071555 |