F270358

General Info

Members Datasets Scaffolds Average Seq Length
177 84 354 369

Family's Representative Sequence

Representative Sequence 3300025949|Ga0207667_10031056|Ga0207667_100310566
Length 403
Sequence MGWWFGRKSAPADVRPFVPTWLRNDAAEEGFARSYHSQFDEVYRRNPVGQRAVRLVSGMLGGLTMDGDERAVPLVKAGGLLEGIAANLLLQGNAYVQLIADGNDRPAELCQLRPERVQVVSDERGWPVGYLYRTGAQAKRINRLDPFDRVQVAHIKQLSPRDDHYGMGCLDAAIAAASVHNRAAKWNKALLDNAARPSGALSYEPADGSVLSAEQFKRLKEELGQEFSGSGNAGRPLLLEGGLKWQALSLTPADMDFVALKEGAARDIALAFGVPPVLVGLPGDATYANAREAGRALYRQTILPMAAKILDALAAMLSDWLGPVSLSVEHRPDQRAGGGPDGAVAGGGRGRFPDRRREARHAGVQGDVILAEARRGEEGPHRRPELVSGSIPDTCGAPHQNGC

Samples

Sample ID Description Type Environment
1 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
61 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
62 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
71 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
72 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
73 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
74 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
81 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
82 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
83 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
84 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.69
Rhizosphere 98.31
Stem 0
Stem Tuber 0
Unclassified 0.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207667_10031056 3300025949 Bacteria 5770
2 JGI24737J22298_10018153 3300001990 Bacteria 2259
3 Ga0070658_10196629 3300005327 Bacteria 1700
4 Ga0070683_100000827 3300005329 Bacteria 22909
5 Ga0070683_100189198 3300005329 Bacteria 1954
6 Ga0070670_100014712 3300005331 Bacteria 6719
7 Ga0070666_10013260 3300005335 Bacteria 5226
8 Ga0070680_100000190 3300005336 Bacteria 39640
9 Ga0070660_100008044 3300005339 Bacteria 7371
10 Ga0070668_100232018 3300005347 Bacteria 1526
11 Ga0070671_100007379 3300005355 Bacteria 8784
12 Ga0070671_100268153 3300005355 Bacteria 1451
13 Ga0070659_100030149 3300005366 Bacteria 4196
14 Ga0070667_100064759 3300005367 Bacteria 3102
15 Ga0070663_100173675 3300005455 Bacteria 1667
16 Ga0070662_100000107 3300005457 Bacteria 46051
17 Ga0070662_100067028 3300005457 Bacteria 2635
18 Ga0070684_100037735 3300005535 Bacteria 4147
19 Ga0070684_100077124 3300005535 Bacteria 2943
20 Ga0068853_100016247 3300005539 Bacteria 6125
21 Ga0070693_100001005 3300005547 Bacteria 12581
22 Ga0070665_100063398 3300005548 Bacteria 3706
23 Ga0068855_100137367 3300005563 Bacteria 2788
24 Ga0068855_100386268 3300005563 Bacteria 1536
25 Ga0068855_100461050 3300005563 Bacteria 1386
26 Ga0070664_100001030 3300005564 Bacteria 21904
27 Ga0068857_100170571 3300005577 Bacteria 1978
28 Ga0068854_100156046 3300005578 Bacteria 1764
29 Ga0068856_100198367 3300005614 Bacteria 2021
30 Ga0068852_100002113 3300005616 Bacteria 13599
31 Ga0068852_100007408 3300005616 Bacteria 8009
32 Ga0068852_100095942 3300005616 Unclassified 2664
33 Ga0068852_100427529 3300005616 Bacteria 1307
34 Ga0068864_100099302 3300005618 Bacteria 2579
35 Ga0068864_100276801 3300005618 Bacteria 1565
36 Ga0097621_100078084 3300006237 Bacteria 2750
37 Ga0105248_10000238 3300009177 Bacteria 63658
38 Ga0105248_10278674 3300009177 Bacteria 1882
39 Ga0157373_10063079 3300013100 Bacteria 2624
40 Ga0157371_10065721 3300013102 Bacteria 2568
41 Ga0157371_10154740 3300013102 Viruses 1636
42 Ga0157370_10048174 3300013104 Bacteria 4083
43 Ga0157370_10114889 3300013104 Bacteria 2515
44 Ga0157369_10003598 3300013105 Bacteria 18411
45 Ga0157369_10005801 3300013105 Bacteria 14357
46 Ga0157369_10115583 3300013105 Bacteria 2849
47 Ga0157372_10013650 3300013307 Bacteria 8681
48 Ga0157379_10077057 3300014968 Bacteria 2985
49 Ga0207680_10057198 3300025903 Bacteria 2359
50 Ga0207647_10052699 3300025904 Bacteria 2510
51 Ga0207705_10002883 3300025909 Bacteria 13161
52 Ga0207705_10068135 3300025909 Bacteria 2576
53 Ga0207660_10002027 3300025917 Bacteria 13479
54 Ga0207657_10000643 3300025919 Bacteria 37091
55 Ga0207657_10072470 3300025919 Bacteria 2914
56 Ga0207657_10082451 3300025919 Bacteria 2699
57 Ga0207657_10092216 3300025919 Bacteria 2525
58 Ga0207650_10021246 3300025925 Bacteria 4589
59 Ga0207650_10191013 3300025925 Bacteria 1636
60 Ga0207644_10003584 3300025931 Bacteria 10050
61 Ga0207644_10005561 3300025931 Bacteria 8203
62 Ga0207644_10235876 3300025931 Bacteria 1455
63 Ga0207706_10000211 3300025933 Bacteria 63984
64 Ga0207691_10068204 3300025940 Bacteria 3214
65 Ga0207711_10002566 3300025941 Bacteria 16161
66 Ga0207711_10053740 3300025941 Bacteria 3454
67 Ga0207661_10014294 3300025944 Bacteria 5814
68 Ga0207661_10027453 3300025944 Bacteria 4348
69 Ga0207679_10002082 3300025945 Bacteria 12410
70 Ga0207667_10403760 3300025949 Bacteria 1391
71 Ga0207640_10092559 3300025981 Bacteria 2098
72 Ga0207640_10117339 3300025981 Bacteria 1899
73 Ga0207640_10190657 3300025981 Bacteria 1545
74 Ga0207639_10000991 3300026041 Bacteria 19346
75 Ga0207678_10084217 3300026067 Bacteria 2719
76 Ga0207678_10333822 3300026067 Bacteria 1305
77 Ga0207676_10304878 3300026095 Bacteria 1455
78 Ga0207674_10022481 3300026116 Bacteria 6770
79 Ga0207683_10080772 3300026121 Bacteria 2885
80 Ga0207698_10152297 3300026142 Bacteria 2009
81 Ga0268264_10164068 3300028381 Bacteria 2004
82 Ga0307408_100006449 3300031548 Bacteria 7777
83 Ga0307413_10001753 3300031824 Bacteria 8486
84 Ga0307413_10234845 3300031824 Bacteria 1349
85 Ga0307410_10000320 3300031852 Bacteria 18645
86 Ga0307410_10054628 3300031852 Bacteria 2708
87 Ga0307410_10106275 3300031852 Bacteria 2022
88 Ga0307410_10134537 3300031852 Bacteria 1820
89 Ga0307406_10001145 3300031901 Bacteria 14817
90 Ga0307406_10143640 3300031901 Bacteria 1693
91 Ga0307407_10001267 3300031903 Bacteria 8993
92 Ga0307407_10001308 3300031903 Bacteria 8896
93 Ga0307407_10127878 3300031903 Bacteria 1621
94 Ga0307407_10144189 3300031903 Bacteria 1540
95 Ga0307412_10002837 3300031911 Bacteria 9608
96 Ga0307412_10294813 3300031911 Bacteria 1279
97 Ga0307409_100000898 3300031995 Bacteria 13796
98 Ga0307409_100007987 3300031995 Bacteria 6378
99 Ga0307409_100016138 3300031995 Bacteria 4932
100 Ga0307409_100045872 3300031995 Bacteria 3304
101 Ga0307409_100253534 3300031995 Bacteria 1610
102 Ga0307416_100000488 3300032002 Bacteria 20200
103 Ga0307416_100009974 3300032002 Bacteria 6250
104 Ga0307414_10002972 3300032004 Bacteria 8971
105 Ga0307414_10195210 3300032004 Bacteria 1641
106 Ga0307414_10196364 3300032004 Bacteria 1637
107 Ga0307414_10301139 3300032004 Bacteria 1356
108 Ga0307414_10373650 3300032004 Bacteria 1230
109 Ga0307411_10000370 3300032005 Bacteria 15258
110 Ga0307411_10001660 3300032005 Bacteria 9300
111 Ga0307411_10008925 3300032005 Bacteria 5232
112 Ga0307411_10018924 3300032005 Bacteria 3964
113 Ga0307415_100000453 3300032126 Bacteria 17622
114 Ga0307415_100154537 3300032126 Bacteria 1770
115 Ga0307415_100232992 3300032126 Bacteria 1484
116 Ga0395899_0002954 3300037312 Bacteria 13606
117 Ga0395899_0003159 3300037312 Bacteria 13082
118 Ga0395899_0006573 3300037312 Bacteria 9010
119 Ga0395899_0062801 3300037312 Bacteria 2734
120 Ga0395899_0066824 3300037312 Bacteria 2639
121 Ga0395899_0092917 3300037312 Bacteria 2184
122 Ga0395900_0001087 3300037418 Bacteria 34570
123 Ga0395900_0003181 3300037418 Bacteria 17785
124 Ga0395900_0051939 3300037418 Bacteria 4221
125 Ga0395900_0077544 3300037418 Bacteria 3413
126 Ga0395900_0109440 3300037418 Bacteria 2838
127 Ga0395900_0116996 3300037418 Bacteria 2735
128 Ga0395900_0123686 3300037418 Bacteria 2653
129 Ga0395900_0125322 3300037418 Bacteria 2634
130 Ga0395900_0156223 3300037418 Bacteria 2329
131 Ga0395900_0210848 3300037418 Bacteria 1961
132 Ga0395900_0272042 3300037418 Bacteria 1688
133 Ga0395898_0005914 3300037466 Bacteria 13147
134 Ga0395898_0026883 3300037466 Bacteria 5783
135 Ga0395898_0070404 3300037466 Bacteria 3381
136 Ga0395898_0081970 3300037466 Bacteria 3110
137 Ga0395898_0214009 3300037466 Bacteria 1838
138 Ga0395898_0371169 3300037466 Bacteria 1364
139 Ga0395905_0097340 3300037471 Bacteria 2762
140 Ga0395905_0098122 3300037471 Bacteria 2751
141 Ga0395905_0146153 3300037471 Bacteria 2224
142 Ga0395905_0170769 3300037471 Bacteria 2042
143 Ga0395901_0000140 3300038443 Bacteria 94487
144 Ga0395901_0002622 3300038443 Bacteria 18181
145 Ga0395901_0038729 3300038443 Bacteria 4931
146 Ga0395901_0042685 3300038443 Bacteria 4702
147 Ga0395901_0065930 3300038443 Bacteria 3771
148 Ga0395901_0076724 3300038443 Bacteria 3487
149 Ga0395901_0118660 3300038443 Bacteria 2779
150 Ga0395901_0162274 3300038443 Bacteria 2347
151 Ga0395901_0175120 3300038443 Bacteria 2250
152 Ga0395901_0190880 3300038443 Bacteria 2148
153 Ga0439458_0008400 3300042157 Bacteria 2298
154 Ga0466972_0115215 3300044658 Bacteria 1269
155 Ga0466966_0003039 3300044684 Bacteria 11078
156 Ga0466961_0005745 3300044693 Bacteria 7850
157 Ga0466963_0051915 3300044694 Bacteria 2719
158 Ga0466963_0052075 3300044694 Bacteria 2715
159 Ga0466963_0220734 3300044694 Bacteria 1327
160 Ga0466970_0031001 3300044765 Bacteria 2822
161 Ga0466970_0052347 3300044765 Bacteria 2179
162 Ga0466957_0000183 3300044842 Bacteria 28401
163 Ga0466957_0069468 3300044842 Bacteria 2176
164 Ga0466957_0082284 3300044842 Bacteria 2007
165 Ga0466957_0195624 3300044842 Bacteria 1326
166 Ga0466959_0002065 3300045049 Bacteria 12704
167 Ga0466959_0040550 3300045049 Bacteria 3439
168 Ga0466958_0002900 3300045836 Bacteria 8757
169 Ga0466958_0060856 3300045836 Bacteria 2299
170 Ga0466967_0062070 3300045976 Bacteria 3317
171 Ga0466967_0383229 3300045976 Bacteria 1365
172 Ga0495669_0012030 3300046684 Bacteria 3680
173 Ga0496110_0023730 3300048913 Bacteria 5219
174 Ga0496111_0084309 3300048914 Bacteria 2323
175 Ga0496111_0149572 3300048914 Bacteria 1732
176 Ga0501071_0204816 3300049587 Bacteria 1483
177 Ga0501268_009951 3300049765 Bacteria 1471
178 Ga0207667_10031056
179 JGI24737J22298_10018153
180 Ga0070658_10196629
181 Ga0070683_100000827
182 Ga0070683_100189198
183 Ga0070670_100014712
184 Ga0070666_10013260
185 Ga0070680_100000190
186 Ga0070660_100008044
187 Ga0070668_100232018
188 Ga0070671_100007379
189 Ga0070671_100268153
190 Ga0070659_100030149
191 Ga0070667_100064759
192 Ga0070663_100173675
193 Ga0070662_100000107
194 Ga0070662_100067028
195 Ga0070684_100037735
196 Ga0070684_100077124
197 Ga0068853_100016247
198 Ga0070693_100001005
199 Ga0070665_100063398
200 Ga0068855_100137367
201 Ga0068855_100386268
202 Ga0068855_100461050
203 Ga0070664_100001030
204 Ga0068857_100170571
205 Ga0068854_100156046
206 Ga0068856_100198367
207 Ga0068852_100002113
208 Ga0068852_100007408
209 Ga0068852_100095942
210 Ga0068852_100427529
211 Ga0068864_100099302
212 Ga0068864_100276801
213 Ga0097621_100078084
214 Ga0105248_10000238
215 Ga0105248_10278674
216 Ga0157373_10063079
217 Ga0157371_10065721
218 Ga0157371_10154740
219 Ga0157370_10048174
220 Ga0157370_10114889
221 Ga0157369_10003598
222 Ga0157369_10005801
223 Ga0157369_10115583
224 Ga0157372_10013650
225 Ga0157379_10077057
226 Ga0207680_10057198
227 Ga0207647_10052699
228 Ga0207705_10002883
229 Ga0207705_10068135
230 Ga0207660_10002027
231 Ga0207657_10000643
232 Ga0207657_10072470
233 Ga0207657_10082451
234 Ga0207657_10092216
235 Ga0207650_10021246
236 Ga0207650_10191013
237 Ga0207644_10003584
238 Ga0207644_10005561
239 Ga0207644_10235876
240 Ga0207706_10000211
241 Ga0207691_10068204
242 Ga0207711_10002566
243 Ga0207711_10053740
244 Ga0207661_10014294
245 Ga0207661_10027453
246 Ga0207679_10002082
247 Ga0207667_10403760
248 Ga0207640_10092559
249 Ga0207640_10117339
250 Ga0207640_10190657
251 Ga0207639_10000991
252 Ga0207678_10084217
253 Ga0207678_10333822
254 Ga0207676_10304878
255 Ga0207674_10022481
256 Ga0207683_10080772
257 Ga0207698_10152297
258 Ga0268264_10164068
259 Ga0307408_100006449
260 Ga0307413_10001753
261 Ga0307413_10234845
262 Ga0307410_10000320
263 Ga0307410_10054628
264 Ga0307410_10106275
265 Ga0307410_10134537
266 Ga0307406_10001145
267 Ga0307406_10143640
268 Ga0307407_10001267
269 Ga0307407_10001308
270 Ga0307407_10127878
271 Ga0307407_10144189
272 Ga0307412_10002837
273 Ga0307412_10294813
274 Ga0307409_100000898
275 Ga0307409_100007987
276 Ga0307409_100016138
277 Ga0307409_100045872
278 Ga0307409_100253534
279 Ga0307416_100000488
280 Ga0307416_100009974
281 Ga0307414_10002972
282 Ga0307414_10195210
283 Ga0307414_10196364
284 Ga0307414_10301139
285 Ga0307414_10373650
286 Ga0307411_10000370
287 Ga0307411_10001660
288 Ga0307411_10008925
289 Ga0307411_10018924
290 Ga0307415_100000453
291 Ga0307415_100154537
292 Ga0307415_100232992
293 Ga0395899_0002954
294 Ga0395899_0003159
295 Ga0395899_0006573
296 Ga0395899_0062801
297 Ga0395899_0066824
298 Ga0395899_0092917
299 Ga0395900_0001087
300 Ga0395900_0003181
301 Ga0395900_0051939
302 Ga0395900_0077544
303 Ga0395900_0109440
304 Ga0395900_0116996
305 Ga0395900_0123686
306 Ga0395900_0125322
307 Ga0395900_0156223
308 Ga0395900_0210848
309 Ga0395900_0272042
310 Ga0395898_0005914
311 Ga0395898_0026883
312 Ga0395898_0070404
313 Ga0395898_0081970
314 Ga0395898_0214009
315 Ga0395898_0371169
316 Ga0395905_0097340
317 Ga0395905_0098122
318 Ga0395905_0146153
319 Ga0395905_0170769
320 Ga0395901_0000140
321 Ga0395901_0002622
322 Ga0395901_0038729
323 Ga0395901_0042685
324 Ga0395901_0065930
325 Ga0395901_0076724
326 Ga0395901_0118660
327 Ga0395901_0162274
328 Ga0395901_0175120
329 Ga0395901_0190880
330 Ga0439458_0008400
331 Ga0466972_0115215
332 Ga0466966_0003039
333 Ga0466961_0005745
334 Ga0466963_0051915
335 Ga0466963_0052075
336 Ga0466963_0220734
337 Ga0466970_0031001
338 Ga0466970_0052347
339 Ga0466957_0000183
340 Ga0466957_0069468
341 Ga0466957_0082284
342 Ga0466957_0195624
343 Ga0466959_0002065
344 Ga0466959_0040550
345 Ga0466958_0002900
346 Ga0466958_0060856
347 Ga0466967_0062070
348 Ga0466967_0383229
349 Ga0495669_0012030
350 Ga0496110_0023730
351 Ga0496111_0084309
352 Ga0496111_0149572
353 Ga0501071_0204816
354 Ga0501268_009951

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04860

Phage_portal

Phage portal protein

68

338

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7mgn-assembly1.cif.gz_A crystal structure of f501h/h506e variant of 2-ketopropyl coenzyme m oxidoreductase/carboxylase (2-kpcc) from xanthobacter autotrophicus 0.7548 117 142
7mgo-assembly1.cif.gz_B crystal structure of f501h variant of 2-ketopropyl coenzyme m oxidoreductase/carboxylase (2-kpcc) from xanthobacter autotrophicus 0.7164 117 142
6te8-assembly1.cif.gz_A neck of native gta particle computed with c12 symmetry 0.6051 37 365
6tba-assembly1.cif.gz_1A virion of native gene transfer agent (gta) particle 0.5991 28 365
6toa-assembly1.cif.gz_A neck of empty gta particle computed with c6 symmetry 0.5937 28 365
ID Description Score Start End Superfamily
1mokA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.7893 118 142 3.50.50.60
af_A0A1D6H393_88_333_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.7556 117 142 2.120.10.80
af_I1LSN9_444_797_3.40.850.10 Alpha Beta;3-Layer(aba) Sandwich;Kinesin;Kinesin motor domain 0.7555 116 142 3.40.850.10
af_Q58931_120_233_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.6824 118 142 3.50.50.60
af_Q9BZP6_428_476_2.170.140.10 Mainly Beta;Beta Complex;Antimicrobial Protein, Tachycitin; Chain A;Chitin binding domain 0.6699 117 142 2.170.140.10
ID Description Score Start End GO Terms
AF-A0A2N7XUM4-F1-model_v4 Phage portal protein 0.9689 43 130
AF-A0A2N7XUM4-F1-model_v4 Phage portal protein 0.8898 43 130
AF-X1B214-F1-model_v4 Phage portal protein 0.8035 43 141
AF-A0A547PBJ6-F1-model_v4 Phage portal protein 0.7837 17 164
AF-A0A6M1CLI9-F1-model_v4 deleted 0.7726 50 159

Map