F269166

General Info

Members Datasets Scaffolds Average Seq Length
176 150 120 986

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2508501039|2508678160
Length 1153
Sequence GRPGAARAQRAARARAQLAQRDGPPAEHTSSSEHESAQWAVADRPPAVAPVGPPTPAPASAPGGGAHPRGSSAEAQLARLGFTDVDRVAATLHRLGFGPPDGLPLTANPVVAELAHAADPDRALAGLDRLIDTLDTQDLTDAPGPTGVAGAARPADPTRSSAELRAALATRPGSRRRLITVLGASLALADHLAAHPADWRILADDEATAAAPTAATHRARLLAAVGADPDDERPRARGDGPDVLDALRVAYRRALLVLAARDLTNTVTVEDATAELADLAAAALDAGLAVARAGLAPTAPPVRLAVIGMGKCGGRELNYVSDVDVVFVAEPATASLPDGPGAATTAATGTADAAEPPEEAALRAATRLAEGLVRACGTRTSEGALFQVDVGLRPEGRDGALVRTLASHRAYYGRWARTWEFQALLKARPVAGDLALGAEFCSMVEPLVWSAASRPGFVADIRAMRRRVEASLSSREASRNIKLGPGGLRDVEFAVQLLQLVHGRTDTKLHARATLHAIDGLARGGYVGRRDATSLADAYRFLRAVEHRLQLRRLQRTHVLPRDPDELRWLGRSLGMLGAEEFAAEHAYTARSVRRLHEQLFYQPLLEAVARLSAEQVRLTPGEAADRLAALGFAYPHRSLKHIEALTAGVSRTATIQRHLLPTMLPAFADAADPDAGLLAYRQVSEALGRVPWYLRLLRDSAGAADRLARVLAASGYVAALMRAAPESVRLLRTEEDLRPVGRGELARTLLAVARRNLDADDAAARARAIRRVELVRVACADLLGLLDATAVGEALAAAATATIEASLLVARRTVTRRLAAGRPAADRFAAVGQPADDLEDQRTCENDLPSHARQASFSGALAGEPARIAVVAMGRLGGGEMSYGSDADVLFVHEPRPGVGARAAGEYATAVVEELVRLLGQPGPDPALRLDLGLRPEGRNGPVTRDLDGYAAYYRRWALGWEAQALLRARPLAGDAELAARFRDLADGFRYPARLPGGAIAEVERLRDRMGAARVPRGADRTLHVKFGPGGLTDVEWTIQILQLRHAHEIPALRTTGTLTALRELATAGLLDGAEAAVLSAAWLSASRIRNAILLARGTPGDLIPRTTPALDRVAGVLGYPLEQVTDVLDDHRRAAAAARHVTDRIFAREQA

Samples

Sample ID Description Type Environment
1 2506783011 Frankia datiscae Dg1 Isolate Nodule
2 2508501039 Frankia saprophytica CN3 Isolate Nodule
3 2517572101 Frankia sp. DC12 Isolate Nodule
4 2527291627 Frankia casuarinae Thr Isolate Nodule
5 2527291629 Frankia sp. BMG5.23 Isolate Nodule
6 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
7 2576861822 Frankia sp. CeD Isolate Nodule
8 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
9 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
10 2619618881 Frankia sp. ACN1ag Isolate Unclassified
11 2619619003 Frankia sp. CpI1-P Isolate Nodule
12 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
13 2626541554 Frankia sp. AvcI.1 Isolate Nodule
14 2643221549 Agromyces sp. Root1464 Isolate Unclassified
15 2643221616 Leifsonia sp. Root227 Isolate Unclassified
16 2643221619 Agromyces sp. Root81 Isolate Unclassified
17 2643221649 Leifsonia sp. Root4 Isolate Unclassified
18 2671180195 Frankia sp. CcI49 Isolate Nodule
19 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
20 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
21 2684623036 Frankia sp. CgIM4 Isolate Nodule
22 2687453737 Frankia sp. BMG5.36 Isolate Nodule
23 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
24 2710264753 Frankia sp. KB5 Isolate Nodule
25 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
26 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
27 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
28 2773857922 Frankia sp. CcI49 Isolate Nodule
29 2773857924 Frankia sp. CgIS1 Isolate Nodule
30 2773857933 Frankia sp. BMG5.30 Isolate Nodule
31 2808606372 Agromyces sp. 23-23 Isolate Unclassified
32 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
33 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
34 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
35 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
36 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
37 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
38 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
39 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
40 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
41 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
42 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
43 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
44 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
45 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
46 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
47 2928153084 Leifsonia sp. 563 Isolate Unclassified
48 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
49 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
50 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
51 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
52 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
53 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
54 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
55 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
56 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
57 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
58 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
59 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
60 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
61 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
62 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
63 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
64 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
67 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
68 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
69 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
70 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
71 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
72 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
73 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
74 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
75 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
76 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
77 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
78 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
79 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
80 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
81 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
82 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
83 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
84 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
85 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
86 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
91 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
92 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
95 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
142 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
143 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
145 637000116 Frankia casuarinae CcI3 Isolate Nodule
146 8002775197 Frankia nepalensis CN7 Isolate Nodule
147 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
148 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
149 8054920844 Frankia tisae Agncl-8 Isolate Nodule
150 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 67.61
Metatranscriptomes 0.57
Isolates 31.82

Biome Distribution

Category Percentage (%)
Aerial Root 0.57
Bulb 0
Endosphere 14.77
Nodule 13.07
Rhizoplane 1.7
Rhizosphere 55.11
Stem 0
Stem Tuber 0.57
Unclassified 14.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000419 3300002772 Bacteria 24049
2 JGI25165J46597_1000004 3300003214 Bacteria 667510
3 Ga0055539_1000008 3300003752 Bacteria 537665
4 Ga0055533_1000001 3300003756 Bacteria 1863437
5 Ga0055525_1000382 3300003759 Bacteria 28846
6 Ga0055527_1000001 3300003760 Bacteria 850044
7 Ga0055529_1000019 3300003763 Bacteria 332786
8 Ga0070670_100041915 3300005331 Bacteria 3934
9 Ga0070692_10007005 3300005345 Bacteria 4940
10 Ga0070668_100010194 3300005347 Bacteria 6970
11 Ga0070671_100000573 3300005355 Bacteria 26158
12 Ga0070663_100009843 3300005455 Bacteria 5939
13 Ga0068853_100008114 3300005539 Bacteria 8428
14 Ga0070693_100003029 3300005547 Bacteria 7787
15 Ga0068855_100010858 3300005563 Bacteria 10995
16 Ga0068855_100024232 3300005563 Bacteria 7264
17 Ga0068855_100060561 3300005563 Bacteria 4427
18 Ga0068856_100010892 3300005614 Bacteria 8825
19 Ga0070702_100009944 3300005615 Bacteria 4671
20 Ga0068859_100002503 3300005617 Bacteria 18668
21 Ga0068859_100012762 3300005617 Bacteria 8444
22 Ga0068859_100038131 3300005617 Bacteria 4822
23 Ga0068870_10000619 3300005840 Bacteria 13526
24 Ga0068863_100049684 3300005841 Bacteria 3977
25 Ga0068858_100008497 3300005842 Bacteria 9867
26 Ga0068858_100037936 3300005842 Bacteria 4469
27 Ga0068860_100029156 3300005843 Bacteria 5308
28 Ga0068862_100001123 3300005844 Bacteria 25401
29 Ga0097621_100005060 3300006237 Bacteria 9264
30 Ga0097620_100002503 3300006931 Bacteria 18668
31 Ga0097620_100012762 3300006931 Bacteria 8444
32 Ga0097620_100038131 3300006931 Bacteria 4822
33 Ga0105240_10012616 3300009093 Bacteria 11652
34 Ga0105240_10014562 3300009093 Bacteria 10731
35 Ga0111539_10029693 3300009094 Bacteria 6655
36 Ga0105247_10000013 3300009101 Bacteria 287863
37 Ga0105247_10005201 3300009101 Bacteria 8226
38 Ga0105241_10000405 3300009174 Bacteria 32597
39 Ga0105241_10004767 3300009174 Bacteria 9988
40 Ga0105248_10000486 3300009177 Bacteria 45289
41 Ga0105246_10001015 3300011119 Bacteria 16140
42 Ga0157371_10002818 3300013102 Bacteria 16277
43 Ga0157371_10011812 3300013102 Bacteria 6706
44 Ga0157380_10019827 3300014326 Bacteria 5017
45 Ga0157377_10001060 3300014745 Bacteria 11618
46 Ga0206353_12037789 3300020082 Bacteria 10973
47 Ga0209566_100149 3300025225 Bacteria 81626
48 Ga0209674_100001 3300025226 Bacteria 4013750
49 Ga0209672_100006 3300025228 Bacteria 1004497
50 Ga0209563_100001 3300025230 Bacteria 4013775
51 Ga0209563_100464 3300025230 Bacteria 13987
52 Ga0207427_100010 3300025231 Bacteria 648610
53 Ga0209437_100216 3300025233 Bacteria 106353
54 Ga0209677_100001 3300025253 Bacteria 4013787
55 Ga0209677_100608 3300025253 Bacteria 19222
56 Ga0209148_1000015 3300025254 Bacteria 850103
57 Ga0209148_1002318 3300025254 Bacteria 6788
58 Ga0209233_1000001 3300025261 Bacteria 2992747
59 Ga0209455_1000013 3300025272 Bacteria 850103
60 Ga0209455_1003867 3300025272 Bacteria 5111
61 Ga0207710_10000030 3300025900 Bacteria 287870
62 Ga0207710_10004953 3300025900 Bacteria 5770
63 Ga0207643_10000196 3300025908 Bacteria 41902
64 Ga0207705_10013954 3300025909 Bacteria 5793
65 Ga0207654_10000001 3300025911 Bacteria 1816198
66 Ga0207695_10013815 3300025913 Bacteria 9605
67 Ga0207660_10005605 3300025917 Bacteria 8153
68 Ga0207657_10010302 3300025919 Bacteria 9332
69 Ga0207711_10000282 3300025941 Bacteria 54527
70 Ga0207689_10007762 3300025942 Bacteria 9389
71 Ga0207661_10005347 3300025944 Bacteria 9040
72 Ga0207679_10003542 3300025945 Bacteria 9667
73 Ga0207667_10000874 3300025949 Bacteria 38483
74 Ga0207668_10011470 3300025972 Bacteria 5386
75 Ga0207708_10011656 3300026075 Bacteria 6550
76 Ga0207702_10002348 3300026078 Bacteria 18060
77 Ga0207676_10000651 3300026095 Bacteria 27828
78 Ga0207683_10000757 3300026121 Bacteria 29362
79 Ga0268265_10000024 3300028380 Bacteria 266266
80 Ga0395898_0010564 3300037466 Bacteria 9642
81 Ga0466966_0029130 3300044684 Bacteria 3594
82 Ga0466970_0007331 3300044765 Bacteria 5527
83 Ga0466960_0006651 3300044901 Bacteria 4648
84 Ga0466967_0005277 3300045976 Bacteria 8914
85 Ga0496109_0011235 3300048912 Bacteria 7688
86 Ga0496110_0005300 3300048913 Bacteria 10096
87 Ga0496116_0000430 3300048919 Bacteria 58902
88 Ga0496117_0005962 3300048920 Bacteria 12562
89 Ga0496117_0006155 3300048920 Bacteria 12264
90 Ga0496118_0001119 3300048921 Bacteria 41534
91 Ga0496119_0001843 3300048922 Bacteria 24501
92 Ga0496119_0003767 3300048922 Bacteria 15520
93 Ga0496119_0006417 3300048922 Bacteria 10909
94 Ga0496120_0000103 3300048923 Bacteria 141601
95 Ga0496120_0000738 3300048923 Bacteria 47796
96 Ga0496121_0000076 3300048924 Bacteria 239775
97 Ga0496123_0014314 3300048926 Bacteria 6585
98 Ga0496124_0000453 3300048927 Bacteria 71849
99 Ga0501034_0029267 3300049571 Bacteria 5599
100 Ga0501034_0033617 3300049571 Bacteria 5200
101 Ga0501034_0072624 3300049571 Bacteria 3449
102 Ga0501043_0040052 3300049579 Bacteria 3683
103 Ga0501047_0017264 3300049581 Bacteria 6910
104 Ga0501070_0010866 3300049586 Bacteria 7691
105 Ga0501070_0056143 3300049586 Bacteria 3264
106 Ga0501071_0000056 3300049587 Bacteria 38160
107 Ga0501073_0000075 3300049589 Bacteria 61808
108 Ga0501080_0002993 3300049742 Bacteria 14893
109 Ga0501080_0013045 3300049742 Bacteria 7631
110 Ga0501035_0012711 3300049822 Bacteria 7779
111 Ga0501044_0006974 3300049823 Bacteria 12429
112 nmdc:mga08y16_17936_c1 3300050511 Bacteria 7458
113 nmdc:mga08x19_5383_c1 3300050514 Bacteria 7564
114 nmdc:mga0a205_20958_c1 3300050515 Bacteria 6177
115 Ga0500562_001093 3300053108 Bacteria 6657
116 Ga0500559_0000338 3300053136 Bacteria 35118
117 Ga0500559_0002484 3300053136 Bacteria 9499
118 Ga0500616_0001006 3300053153 Bacteria 30305
119 Ga0500616_0001369 3300053153 Bacteria 23653
120 Ga0466962_0011928 3300061719 Bacteria 4181

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005539 Ga0068853_100008114 Ga0068853_1000081145 842
2 3300005345 Ga0070692_10007005 Ga0070692_100070052 873
3 3300005455 Ga0070663_100009843 Ga0070663_1000098432 873
4 3300005547 Ga0070693_100003029 Ga0070693_1000030296 873
5 3300005840 Ga0068870_10000619 Ga0068870_100006198 873
6 3300009101 Ga0105247_10005201 Ga0105247_100052015 873
7 3300009174 Ga0105241_10004767 Ga0105241_100047679 873
8 3300013102 Ga0157371_10011812 Ga0157371_100118124 873
9 3300025900 Ga0207710_10004953 Ga0207710_100049532 873
10 3300025917 Ga0207660_10005605 Ga0207660_100056053 873
11 3300025919 Ga0207657_10010302 Ga0207657_100103024 873
12 3300050514 nmdc:mga08x19_5383_c1 nmdc:mga08x19_5383_c1_823_3789 873
13 3300005615 Ga0070702_100009944 Ga0070702_1000099443 874
14 3300049571 Ga0501034_0072624 Ga0501034_0072624_733_3438 881
15 3300005331 Ga0070670_100041915 Ga0070670_1000419152 886
16 3300005355 Ga0070671_100000573 Ga0070671_10000057313 886
17 3300005617 Ga0068859_100038131 Ga0068859_1000381313 886
18 3300005842 Ga0068858_100008497 Ga0068858_1000084975 886
19 3300005843 Ga0068860_100029156 Ga0068860_1000291562 886
20 3300006237 Ga0097621_100005060 Ga0097621_1000050603 886
21 3300006931 Ga0097620_100038131 Ga0097620_1000381313 886
22 3300009094 Ga0111539_10029693 Ga0111539_100296933 886
23 3300014745 Ga0157377_10001060 Ga0157377_100010605 886
24 3300025908 Ga0207643_10000196 Ga0207643_1000019616 886
25 3300025909 Ga0207705_10013954 Ga0207705_100139543 886
26 3300025942 Ga0207689_10007762 Ga0207689_100077628 886
27 3300025944 Ga0207661_10005347 Ga0207661_100053474 886
28 3300025945 Ga0207679_10003542 Ga0207679_100035423 886
29 3300026075 Ga0207708_10011656 Ga0207708_100116563 886
30 3300026078 Ga0207702_10002348 Ga0207702_100023483 886
31 3300026095 Ga0207676_10000651 Ga0207676_100006518 886
32 3300026121 Ga0207683_10000757 Ga0207683_1000075710 886
33 3300048912 Ga0496109_0011235 Ga0496109_0011235_1263_4229 886
34 3300048913 Ga0496110_0005300 Ga0496110_0005300_2031_4997 886
35 3300050511 nmdc:mga08y16_17936_c1 nmdc:mga08y16_17936_c1_4454_7420 886
36 3300050515 nmdc:mga0a205_20958_c1 nmdc:mga0a205_20958_c1_64_3030 886
37 3300011119 Ga0105246_10001015 Ga0105246_100010156 887
38 3300005617 Ga0068859_100002503 Ga0068859_1000025038 888
39 3300005844 Ga0068862_100001123 Ga0068862_10000112312 888
40 3300006931 Ga0097620_100002503 Ga0097620_1000025038 888
41 3300028380 Ga0268265_10000024 Ga0268265_1000002427 888
42 3300005563 Ga0068855_100010858 Ga0068855_1000108584 903
43 3300005617 Ga0068859_100012762 Ga0068859_1000127625 903
44 3300005842 Ga0068858_100037936 Ga0068858_1000379362 903
45 3300006931 Ga0097620_100012762 Ga0097620_1000127622 903
46 3300061719 Ga0466962_0011928 Ga0466962_0011928_1012_4032 903
47 3300005614 Ga0068856_100010892 Ga0068856_1000108924 910
48 3300009093 Ga0105240_10014562 Ga0105240_100145624 914
49 3300048919 Ga0496116_0000430 Ga0496116_0000430_44179_47382 917
50 3300048920 Ga0496117_0006155 Ga0496117_0006155_6822_10025 917
51 3300048922 Ga0496119_0006417 Ga0496119_0006417_4831_8034 917
52 3300049586 Ga0501070_0056143 Ga0501070_0056143_181_3072 917
53 3300044901 Ga0466960_0006651 Ga0466960_0006651_38_3025 918
54 3300005841 Ga0068863_100049684 Ga0068863_1000496842 922
55 3300053153 Ga0500616_0001006 Ga0500616_0001006_1841_4753 923
56 3300049589 Ga0501073_0000075 Ga0501073_0000075_47862_50783 930
57 3300005563 Ga0068855_100024232 Ga0068855_1000242322 932
58 3300025949 Ga0207667_10000874 Ga0207667_1000087428 932
59 3300045976 Ga0466967_0005277 Ga0466967_0005277_1238_4333 932
60 3300009101 Ga0105247_10000013 Ga0105247_10000013210 934
61 3300025900 Ga0207710_10000030 Ga0207710_10000030210 934
62 3300048922 Ga0496119_0001843 Ga0496119_0001843_8809_11976 934
63 3300048923 Ga0496120_0000103 Ga0496120_0000103_113572_116739 934
64 3300025272 Ga0209455_1003867 Ga0209455_10038671 937
65 3300009177 Ga0105248_10000486 Ga0105248_1000048626 938
66 3300025941 Ga0207711_10000282 Ga0207711_1000028233 938
67 3300053108 Ga0500562_001093 Ga0500562_001093_1907_4807 940
68 3300037466 Ga0395898_0010564 Ga0395898_0010564_2098_5193 944
69 3300048924 Ga0496121_0000076 Ga0496121_0000076_94358_97240 946
70 3300048922 Ga0496119_0003767 Ga0496119_0003767_10525_13449 948
71 3300048923 Ga0496120_0000738 Ga0496120_0000738_6433_9357 948
72 3300009093 Ga0105240_10012616 Ga0105240_1001261611 949
73 3300009174 Ga0105241_10000405 Ga0105241_1000040522 949
74 3300025254 Ga0209148_1002318 Ga0209148_10023184 949
75 3300025911 Ga0207654_10000001 Ga0207654_100000011774 949
76 3300025913 Ga0207695_10013815 Ga0207695_100138152 949
77 3300048926 Ga0496123_0014314 Ga0496123_0014314_824_3730 949
78 3300049571 Ga0501034_0029267 Ga0501034_0029267_2316_5258 949
79 3300049587 Ga0501071_0000056 Ga0501071_0000056_25233_28175 949
80 3300053153 Ga0500616_0001369 Ga0500616_0001369_8724_11621 949
81 3300049742 Ga0501080_0013045 Ga0501080_0013045_2893_5781 950
82 3300049579 Ga0501043_0040052 Ga0501043_0040052_338_3238 952
83 3300049581 Ga0501047_0017264 Ga0501047_0017264_3887_6787 952
84 3300049822 Ga0501035_0012711 Ga0501035_0012711_2043_4943 952
85 3300049823 Ga0501044_0006974 Ga0501044_0006974_981_3881 952
86 3300049571 Ga0501034_0033617 Ga0501034_0033617_701_3589 953
87 iso_pu_bacteria 2904430863 2904433023 955
88 iso_pu_bacteria 2904501621 2904502843 955
89 iso_pu_bacteria 2908674828 2908677931 955
90 iso_pu_bacteria 2909074476 2909075036 955
91 iso_pu_bacteria 2928500415 2928501715 955
92 3300049586 Ga0501070_0010866 Ga0501070_0010866_1112_4009 956
93 3300049742 Ga0501080_0002993 Ga0501080_0002993_11725_14622 956
94 3300053136 Ga0500559_0000338 Ga0500559_0000338_25321_28221 957
95 iso_pu_bacteria 2687453743 2689993490 960
96 3300013102 Ga0157371_10002818 Ga0157371_100028188 962
97 iso_pu_bacteria 2751185788 2753301847 962
98 iso_pu_bacteria 2928104781 2928108480 962
99 3300048920 Ga0496117_0005962 Ga0496117_0005962_5320_8274 965
100 3300048921 Ga0496118_0001119 Ga0496118_0001119_34401_37355 965
101 3300048927 Ga0496124_0000453 Ga0496124_0000453_57389_60343 965
102 iso_pu_bacteria 2852643534 2852645591 965
103 iso_pu_bacteria 2622736605 2623498461 966
104 iso_pu_bacteria 2919039151 2919040454 966
105 iso_pu_bacteria 2919042368 2919045960 966
106 iso_pu_bacteria 2984551494 2984553999 966
107 3300003760 Ga0055527_1000001 Ga0055527_1000001510 967
108 3300003763 Ga0055529_1000019 Ga0055529_100001916 967
109 3300005563 Ga0068855_100060561 Ga0068855_1000605612 967
110 3300025228 Ga0209672_100006 Ga0209672_100006467 967
111 3300025254 Ga0209148_1000015 Ga0209148_1000015311 967
112 3300025272 Ga0209455_1000013 Ga0209455_1000013311 967
113 iso_pu_bacteria 2671180195 2671833750 968
114 iso_pu_bacteria 2773857922 2774851906 968
115 3300044765 Ga0466970_0007331 Ga0466970_0007331_1650_4634 969
116 iso_pu_bacteria 2579778521 2579857109 969
117 iso_pu_bacteria 2619618881 2619858226 969
118 iso_pu_bacteria 2619619003 2620352407 969
119 iso_pu_bacteria 8054920844 8054921134 969
120 iso_pu_bacteria 8054913762 8054919979 970
121 iso_pu_bacteria 2506783011 2506867789 971
122 iso_pu_bacteria 2508501039 2508678160 971
123 iso_pu_bacteria 2527291627 2528205323 971
124 iso_pu_bacteria 2527291629 2528214795 971
125 iso_pu_bacteria 2546825537 2546950934 971
126 iso_pu_bacteria 2576861822 2579749291 971
127 iso_pu_bacteria 2675902999 2676205001 971
128 iso_pu_bacteria 2684623036 2686543159 971
129 iso_pu_bacteria 2687453737 2689956638 971
130 iso_pu_bacteria 2710264753 2710604894 971
131 iso_pu_bacteria 2773857921 2774849576 971
132 iso_pu_bacteria 2773857924 2774866069 971
133 iso_pu_bacteria 2773857933 2774901872 971
134 iso_pu_bacteria 637000116 637880465 971
135 iso_pu_bacteria 8002775197 8002775210 971
136 iso_pu_bacteria 2684623035 2686538388 972
137 iso_pu_bacteria 2895880812 2895889542 972
138 iso_pu_bacteria 2517572101 2517759657 973
139 iso_pu_bacteria 2626541554 2626633850 973
140 iso_pu_bacteria 8055157932 8055159812 973
141 3300044684 Ga0466966_0029130 Ga0466966_0029130_155_3193 977
142 iso_pu_bacteria 2897561785 2897563262 977
143 3300020082 Ga0206353_12037789 Ga0206353_120377893 978
144 3300025253 Ga0209677_100608 Ga0209677_10060813 978
145 3300053136 Ga0500559_0002484 Ga0500559_0002484_1433_4450 978
146 iso_pu_bacteria 2643221549 2643767563 985
147 iso_pu_bacteria 2643221619 2644110867 985
148 iso_pu_bacteria 2721755702 2723642171 985
149 iso_pu_bacteria 2808606372 2808902241 985
150 iso_pu_bacteria 2919443155 2919446069 985
151 iso_pu_bacteria 2935409751 2935411541 985
152 iso_pu_bacteria 8046352972 8046356278 987
153 iso_pu_bacteria 2643221649 2644279542 988
154 3300005347 Ga0070668_100010194 Ga0070668_1000101943 989
155 3300014326 Ga0157380_10019827 Ga0157380_100198272 989
156 3300025972 Ga0207668_10011470 Ga0207668_100114703 989
157 iso_pu_bacteria 2585428094 2587862658 992
158 iso_pu_bacteria 2643221616 2644097136 998
159 iso_pu_bacteria 2844841374 2844842696 998
160 iso_pu_bacteria 2884763398 2884765669 998
161 iso_pu_bacteria 2919055335 2919058404 998
162 iso_pu_bacteria 2928153084 2928156304 998
163 iso_pu_bacteria 2919523602 2919524787 999
164 3300002772 JGI25164J39214_1000419 JGI25164J39214_10004193 1002
165 3300003214 JGI25165J46597_1000004 JGI25165J46597_1000004476 1002
166 3300003752 Ga0055539_1000008 Ga0055539_100000844 1002
167 3300003756 Ga0055533_1000001 Ga0055533_10000011026 1002
168 3300003759 Ga0055525_1000382 Ga0055525_100038225 1002
169 3300025225 Ga0209566_100149 Ga0209566_10014937 1002
170 3300025226 Ga0209674_100001 Ga0209674_1000011026 1002
171 3300025230 Ga0209563_100001 Ga0209563_1000011026 1002
172 3300025230 Ga0209563_100464 Ga0209563_1004642 1002
173 3300025231 Ga0207427_100010 Ga0207427_100010105 1002
174 3300025233 Ga0209437_100216 Ga0209437_100216100 1002
175 3300025253 Ga0209677_100001 Ga0209677_1000011026 1002
176 3300025261 Ga0209233_1000001 Ga0209233_10000011844 1002

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

459

601

0.94

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

848

986

0.93

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

1004

1148

0.89

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

175

443

0.86

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

705

834

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8688 573 991
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8457 573 991
3k7d-assembly3.cif.gz_B c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.7061 493 994
3k7d-assembly3.cif.gz_B c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.701 493 994
3k7d-assembly3.cif.gz_A c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.7001 489 992
ID Description Score Start End Superfamily
af_P9WN27_840_994_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9699 839 993 1.20.120.330
af_P9WN27_328_485_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9683 344 493 1.20.120.330
af_P9WN27_840_994_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9638 839 993 1.20.120.330
af_P9WN27_598_833_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9182 607 832 3.30.460.10
af_P9WN27_328_485_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9145 344 493 1.20.120.330
ID Description Score Start End GO Terms
AF-A0A6J6D6B3-F1-model_v4 Unannotated protein 0.9872 862 992 GO:0000820
GO:0005829
GO:0008882
AF-A0A522B744-F1-model_v4 Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 0.9851 800 993 GO:0000820
GO:0005829
GO:0008882
AF-J0NCK4-F1-model_v4 [glutamate--ammonia-ligase] adenylyltransferase-like protein 0.9801 278 463 GO:0000820
GO:0005524
GO:0005829
GO:0008882
GO:0016874
AF-U2RRA1-F1-model_v4 Uncharacterized protein 0.9797 1 197
AF-A0A6G3WJG0-F1-model_v4 Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 0.9774 771 993 GO:0000820
GO:0005524
GO:0005829
GO:0008882

Feature Viewer

pLDDT pTM Quality
86.55 0.6 Medium
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Predicted Structure (AlphaFold2)

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