F268928

General Info

Members Datasets Scaffolds Average Seq Length
176 141 352 423

Family's Representative Sequence

Representative Sequence 3300047320|Ga0495672_0017559|Ga0495672_0017559_1501_2892
Length 463
Sequence VAQPGDLAIDRADAPHLQQDGLPAEALNAEEMARAEQGQLVVSRVIRRLIPFIFLCYVVAYIDRVNIGFAANQLQRDLGLSDAAYGWGAGLFFLGYCIFEIPSNLILERVGARLWIARIMIGWGLVSMAMMFVWDVWSFYAARIVLGIAEAGFFPGMVLYLTYWVPSSERARAGALFMMAAPIAMIVGAPVSEALLGLNGVMGLHGWQWLFIVEGLPAVVLGVLALWFMTDRPEDAKWLPAADRAWLADTMTRERAERAKHQSGGHSLAAILEPKMLLLCVIYFMNTLVTYGVFLWLPKILRDASGFDGMKLSAITAIPFTAALVGMVMIGRHSDRTGERKVHVALCALTAAVGLVLAVAFQDNVVIIVLSFALSQVGQRSVMSVFWAIPPIFLGGTAAAAGIALINSIGNLGGFVGPTVMGTLRGSTQSYSTGLLVLAAALIVEAVLVMTLRLPARPRSIVR

Samples

Sample ID Description Type Environment
1 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
42 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
46 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
47 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
48 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
49 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
50 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
51 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
54 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
55 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
56 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
57 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
58 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
59 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
60 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
61 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
62 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
63 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
64 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
65 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
66 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
67 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
68 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
69 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
70 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
73 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
74 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
75 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
76 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
77 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
78 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
79 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
80 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
81 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
82 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
83 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
84 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
85 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
88 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
89 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
90 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
93 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
96 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
97 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
98 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
99 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
104 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
105 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
115 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
116 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
130 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
131 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
138 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
139 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
140 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.55
Nodule 0
Rhizoplane 2.84
Rhizosphere 89.77
Stem 0
Stem Tuber 0
Unclassified 0.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495672_0017559 3300047320 Bacteria 4783
2 JGI25405J52794_10000546 3300003911 Bacteria 5484
3 Ga0065712_10001903 3300005290 Bacteria 7007
4 Ga0065715_10096702 3300005293 Bacteria 3837
5 Ga0070683_100017848 3300005329 Bacteria 6273
6 Ga0070683_100024019 3300005329 Bacteria 5456
7 Ga0070670_100010801 3300005331 Bacteria 7800
8 Ga0070670_100105288 3300005331 Bacteria 2430
9 Ga0068868_100050694 3300005338 Bacteria 3261
10 Ga0070689_100011407 3300005340 Bacteria 6366
11 Ga0070668_100152175 3300005347 Bacteria 1872
12 Ga0070674_100205177 3300005356 Bacteria 1524
13 Ga0070709_10074173 3300005434 Bacteria 2204
14 Ga0070714_100021987 3300005435 Bacteria 5224
15 Ga0070678_100032412 3300005456 Bacteria 3617
16 Ga0070662_100185108 3300005457 Bacteria 1644
17 Ga0070684_100212036 3300005535 Bacteria 1765
18 Ga0070672_100079956 3300005543 Bacteria 2618
19 Ga0070664_100015630 3300005564 Bacteria 6211
20 Ga0070664_100089595 3300005564 Bacteria 2662
21 Ga0070664_100130278 3300005564 Unclassified 2209
22 Ga0081455_10001703 3300005937 Bacteria 26634
23 Ga0081455_10108899 3300005937 Bacteria 2205
24 Ga0075367_10002182 3300006178 Bacteria 8815
25 Ga0075367_10102372 3300006178 Bacteria 1752
26 Ga0075367_10102897 3300006178 Bacteria 1747
27 Ga0075366_10002661 3300006195 Bacteria 9211
28 Ga0097621_100031864 3300006237 Bacteria 4185
29 Ga0068871_100012356 3300006358 Bacteria 6290
30 Ga0075428_100175403 3300006844 Bacteria 2322
31 Ga0075430_100101735 3300006846 Bacteria 2399
32 Ga0075431_100039013 3300006847 Bacteria 4893
33 Ga0075431_100200904 3300006847 Bacteria 2039
34 Ga0075429_100002276 3300006880 Bacteria 16102
35 Ga0114129_10001928 3300009147 Bacteria 28353
36 Ga0114129_10003953 3300009147 Bacteria 20930
37 Ga0114129_10005604 3300009147 Bacteria 17771
38 Ga0114129_10015976 3300009147 Bacteria 10674
39 Ga0114129_10216311 3300009147 Bacteria 2587
40 Ga0105243_10327389 3300009148 Bacteria 1398
41 Ga0105249_10164962 3300009553 Bacteria 2144
42 Ga0157378_10175949 3300013297 Bacteria 2010
43 Ga0163162_10008885 3300013306 Bacteria 9772
44 Ga0157380_10054107 3300014326 Bacteria 3184
45 Ga0157376_10197037 3300014969 Bacteria 1851
46 Ga0213876_10034848 3300021384 Bacteria 2655
47 Ga0207697_10002895 3300025315 Bacteria 8688
48 Ga0207688_10057584 3300025901 Bacteria 2185
49 Ga0207670_10007049 3300025936 Bacteria 6257
50 Ga0207679_10077692 3300025945 Bacteria 2526
51 Ga0207675_100052539 3300026118 Bacteria 3802
52 Ga0207683_10060030 3300026121 Bacteria 3342
53 Ga0207428_10001052 3300027907 Bacteria 30380
54 Ga0268265_10174061 3300028380 Bacteria 1843
55 Ga0265338_10095158 3300028800 Bacteria 2448
56 Ga0265327_10020779 3300031251 Bacteria 3987
57 Ga0307408_100013393 3300031548 Bacteria 5442
58 Ga0307408_100033827 3300031548 Bacteria 3575
59 Ga0307412_10023654 3300031911 Bacteria 3783
60 Ga0307412_10086524 3300031911 Bacteria 2181
61 Ga0307409_100046082 3300031995 Bacteria 3298
62 Ga0307409_100057048 3300031995 Bacteria 3024
63 Ga0307416_100196801 3300032002 Bacteria 1907
64 Ga0307411_10031664 3300032005 Bacteria 3258
65 Ga0373927_0168164 3300035695 Bacteria 1437
66 Ga0373937_0130284 3300036401 Bacteria 2349
67 Ga0436365_1013444 3300039437 Bacteria 2722
68 Ga0436360_0245018 3300039438 Bacteria 1790
69 Ga0439450_005093 3300042008 Bacteria 2290
70 Ga0439464_0007172 3300042439 Bacteria 2912
71 Ga0466977_0000511 3300044666 Bacteria 12882
72 Ga0466961_0024460 3300044693 Bacteria 3885
73 Ga0495603_0004394 3300046455 Bacteria 8402
74 Ga0495629_0000549 3300046459 Bacteria 30752
75 Ga0495651_0002907 3300046462 Bacteria 13273
76 Ga0495653_0007783 3300046463 Bacteria 8770
77 Ga0495582_0003349 3300046473 Bacteria 9013
78 Ga0495639_0000249 3300046475 Bacteria 26734
79 Ga0495662_0000291 3300046476 Bacteria 21682
80 Ga0495664_0000790 3300046477 Bacteria 16176
81 Ga0495585_0018540 3300046492 Bacteria 4014
82 Ga0495594_0000923 3300046499 Bacteria 15238
83 Ga0495594_0000995 3300046499 Bacteria 14743
84 Ga0495628_0040818 3300046516 Bacteria 3706
85 Ga0495643_0012551 3300046522 Bacteria 5107
86 Ga0495644_0000048 3300046523 Bacteria 57696
87 Ga0495666_0000212 3300046526 Bacteria 24755
88 Ga0495652_0005027 3300046529 Bacteria 12523
89 Ga0495665_0001275 3300046531 Bacteria 13432
90 Ga0495640_0013405 3300046533 Bacteria 6227
91 Ga0495640_0072940 3300046533 Bacteria 2299
92 Ga0495640_0116996 3300046533 Bacteria 1736
93 Ga0495586_0001492 3300046535 Bacteria 12907
94 Ga0495645_0019811 3300046543 Bacteria 4847
95 Ga0495668_0008326 3300046616 Bacteria 6493
96 Ga0495634_0043698 3300046642 Bacteria 3036
97 Ga0495611_0018816 3300046648 Bacteria 2963
98 Ga0495625_0012946 3300046660 Bacteria 6732
99 Ga0495635_0000523 3300046663 Bacteria 24332
100 Ga0495661_0004160 3300046665 Bacteria 10523
101 Ga0495599_0000469 3300046678 Bacteria 22957
102 Ga0495646_0034355 3300046680 Bacteria 3149
103 Ga0495669_0001912 3300046684 Bacteria 8545
104 Ga0495613_0004370 3300046689 Bacteria 10574
105 Ga0495624_0021899 3300046690 Bacteria 4233
106 Ga0495670_0025339 3300046691 Bacteria 2934
107 Ga0495600_0000410 3300046809 Bacteria 22143
108 Ga0495660_0000546 3300046810 Bacteria 30868
109 Ga0495604_0000517 3300047317 Bacteria 33961
110 Ga0495674_0007464 3300047319 Bacteria 10443
111 Ga0495672_0038084 3300047320 Bacteria 2936
112 Ga0495676_0001899 3300047321 Bacteria 18345
113 Ga0495680_0007034 3300047322 Bacteria 10375
114 Ga0495687_000899 3300047443 Bacteria 31140
115 Ga0495687_010325 3300047443 Bacteria 5127
116 Ga0495675_0003828 3300047444 Bacteria 9109
117 Ga0495684_0005597 3300047471 Bacteria 9789
118 Ga0495614_0000099 3300048089 Bacteria 29350
119 Ga0496100_0146189 3300048903 Bacteria 1681
120 Ga0496101_0122418 3300048904 Bacteria 1968
121 Ga0496103_0007080 3300048906 Bacteria 6696
122 Ga0496110_0081725 3300048913 Bacteria 2881
123 Ga0496115_0011636 3300048918 Bacteria 6601
124 Ga0496126_0002117 3300048929 Bacteria 27756
125 Ga0496126_0017851 3300048929 Bacteria 7060
126 Ga0501292_007993 3300049515 Bacteria 1538
127 Ga0501031_0015693 3300049568 Bacteria 4917
128 Ga0501033_0024826 3300049570 Bacteria 4520
129 Ga0501033_0063642 3300049570 Bacteria 2715
130 Ga0501036_0060912 3300049572 Bacteria 3196
131 Ga0501037_0015402 3300049573 Bacteria 5625
132 Ga0501043_0064435 3300049579 Bacteria 2877
133 Ga0501046_0005409 3300049580 Bacteria 11414
134 Ga0501047_0064598 3300049581 Bacteria 3530
135 Ga0501047_0137244 3300049581 Bacteria 2325
136 Ga0501048_0075156 3300049582 Bacteria 2383
137 Ga0501067_0033742 3300049583 Bacteria 2839
138 Ga0501068_0000379 3300049584 Bacteria 22346
139 Ga0501069_0020351 3300049585 Bacteria 3594
140 Ga0501070_0208301 3300049586 Bacteria 1605
141 Ga0501071_0010651 3300049587 Bacteria 6167
142 Ga0501071_0010960 3300049587 Bacteria 6086
143 Ga0501071_0013635 3300049587 Bacteria 5542
144 Ga0501072_0026318 3300049588 Bacteria 4535
145 Ga0501073_0023750 3300049589 Bacteria 4402
146 Ga0501074_0015969 3300049590 Bacteria 5458
147 Ga0501075_0048602 3300049591 Bacteria 3188
148 Ga0501076_0032601 3300049592 Bacteria 4066
149 Ga0501077_0085629 3300049593 Bacteria 1998
150 Ga0501079_0032200 3300049741 Bacteria 4030
151 Ga0501080_0035143 3300049742 Bacteria 4679
152 Ga0501080_0089011 3300049742 Bacteria 2868
153 Ga0501080_0130625 3300049742 Bacteria 2325
154 Ga0501080_0148560 3300049742 Bacteria 2167
155 Ga0501083_0081095 3300049744 Bacteria 2151
156 Ga0501044_0196873 3300049823 Bacteria 1974
157 Ga0501044_0236893 3300049823 Bacteria 1770
158 Ga0501045_0018181 3300049824 Bacteria 4996
159 nmdc:mga06z11_29056_c1 3300050494 Bacteria 2659
160 nmdc:mga04h51_41144_c1 3300050495 Bacteria 1509
161 nmdc:mga05p37_112318_c1 3300050507 Bacteria 3351
162 nmdc:mga05p37_133609_c1 3300050507 Bacteria 3044
163 nmdc:mga05p37_30981_c1 3300050507 Bacteria 6531
164 nmdc:mga05p37_436_c1 3300050507 Bacteria 45285
165 nmdc:mga09592_66573_c1 3300050508 Bacteria 3053
166 nmdc:mga09592_933_c1 3300050508 Bacteria 22958
167 nmdc:mga0qj67_26668_c1 3300050509 Bacteria 4473
168 nmdc:mga0qj67_46420_c1 3300050509 Bacteria 3429
169 nmdc:mga08y16_95798_c1 3300050511 Bacteria 3091
170 nmdc:mga0a205_28769_c1 3300050515 Bacteria 5314
171 Ga0500641_0000908 3300053096 Bacteria 10579
172 Ga0500568_0003048 3300053139 Bacteria 9576
173 Ga0501084_0150223 3300054114 Bacteria 1963
174 Ga0501084_0278713 3300054114 Bacteria 1412
175 Ga0590071_005663 3300059421 Bacteria 2998
176 Ga0501082_0011914 3300060353 Bacteria 7476
177 Ga0495672_0017559
178 JGI25405J52794_10000546
179 Ga0065712_10001903
180 Ga0065715_10096702
181 Ga0070683_100017848
182 Ga0070683_100024019
183 Ga0070670_100010801
184 Ga0070670_100105288
185 Ga0068868_100050694
186 Ga0070689_100011407
187 Ga0070668_100152175
188 Ga0070674_100205177
189 Ga0070709_10074173
190 Ga0070714_100021987
191 Ga0070678_100032412
192 Ga0070662_100185108
193 Ga0070684_100212036
194 Ga0070672_100079956
195 Ga0070664_100015630
196 Ga0070664_100089595
197 Ga0070664_100130278
198 Ga0081455_10001703
199 Ga0081455_10108899
200 Ga0075367_10002182
201 Ga0075367_10102372
202 Ga0075367_10102897
203 Ga0075366_10002661
204 Ga0097621_100031864
205 Ga0068871_100012356
206 Ga0075428_100175403
207 Ga0075430_100101735
208 Ga0075431_100039013
209 Ga0075431_100200904
210 Ga0075429_100002276
211 Ga0114129_10001928
212 Ga0114129_10003953
213 Ga0114129_10005604
214 Ga0114129_10015976
215 Ga0114129_10216311
216 Ga0105243_10327389
217 Ga0105249_10164962
218 Ga0157378_10175949
219 Ga0163162_10008885
220 Ga0157380_10054107
221 Ga0157376_10197037
222 Ga0213876_10034848
223 Ga0207697_10002895
224 Ga0207688_10057584
225 Ga0207670_10007049
226 Ga0207679_10077692
227 Ga0207675_100052539
228 Ga0207683_10060030
229 Ga0207428_10001052
230 Ga0268265_10174061
231 Ga0265338_10095158
232 Ga0265327_10020779
233 Ga0307408_100013393
234 Ga0307408_100033827
235 Ga0307412_10023654
236 Ga0307412_10086524
237 Ga0307409_100046082
238 Ga0307409_100057048
239 Ga0307416_100196801
240 Ga0307411_10031664
241 Ga0373927_0168164
242 Ga0373937_0130284
243 Ga0436365_1013444
244 Ga0436360_0245018
245 Ga0439450_005093
246 Ga0439464_0007172
247 Ga0466977_0000511
248 Ga0466961_0024460
249 Ga0495603_0004394
250 Ga0495629_0000549
251 Ga0495651_0002907
252 Ga0495653_0007783
253 Ga0495582_0003349
254 Ga0495639_0000249
255 Ga0495662_0000291
256 Ga0495664_0000790
257 Ga0495585_0018540
258 Ga0495594_0000923
259 Ga0495594_0000995
260 Ga0495628_0040818
261 Ga0495643_0012551
262 Ga0495644_0000048
263 Ga0495666_0000212
264 Ga0495652_0005027
265 Ga0495665_0001275
266 Ga0495640_0013405
267 Ga0495640_0072940
268 Ga0495640_0116996
269 Ga0495586_0001492
270 Ga0495645_0019811
271 Ga0495668_0008326
272 Ga0495634_0043698
273 Ga0495611_0018816
274 Ga0495625_0012946
275 Ga0495635_0000523
276 Ga0495661_0004160
277 Ga0495599_0000469
278 Ga0495646_0034355
279 Ga0495669_0001912
280 Ga0495613_0004370
281 Ga0495624_0021899
282 Ga0495670_0025339
283 Ga0495600_0000410
284 Ga0495660_0000546
285 Ga0495604_0000517
286 Ga0495674_0007464
287 Ga0495672_0038084
288 Ga0495676_0001899
289 Ga0495680_0007034
290 Ga0495687_000899
291 Ga0495687_010325
292 Ga0495675_0003828
293 Ga0495684_0005597
294 Ga0495614_0000099
295 Ga0496100_0146189
296 Ga0496101_0122418
297 Ga0496103_0007080
298 Ga0496110_0081725
299 Ga0496115_0011636
300 Ga0496126_0002117
301 Ga0496126_0017851
302 Ga0501292_007993
303 Ga0501031_0015693
304 Ga0501033_0024826
305 Ga0501033_0063642
306 Ga0501036_0060912
307 Ga0501037_0015402
308 Ga0501043_0064435
309 Ga0501046_0005409
310 Ga0501047_0064598
311 Ga0501047_0137244
312 Ga0501048_0075156
313 Ga0501067_0033742
314 Ga0501068_0000379
315 Ga0501069_0020351
316 Ga0501070_0208301
317 Ga0501071_0010651
318 Ga0501071_0010960
319 Ga0501071_0013635
320 Ga0501072_0026318
321 Ga0501073_0023750
322 Ga0501074_0015969
323 Ga0501075_0048602
324 Ga0501076_0032601
325 Ga0501077_0085629
326 Ga0501079_0032200
327 Ga0501080_0035143
328 Ga0501080_0089011
329 Ga0501080_0130625
330 Ga0501080_0148560
331 Ga0501083_0081095
332 Ga0501044_0196873
333 Ga0501044_0236893
334 Ga0501045_0018181
335 nmdc:mga06z11_29056_c1
336 nmdc:mga04h51_41144_c1
337 nmdc:mga05p37_112318_c1
338 nmdc:mga05p37_133609_c1
339 nmdc:mga05p37_30981_c1
340 nmdc:mga05p37_436_c1
341 nmdc:mga09592_66573_c1
342 nmdc:mga09592_933_c1
343 nmdc:mga0qj67_26668_c1
344 nmdc:mga0qj67_46420_c1
345 nmdc:mga08y16_95798_c1
346 nmdc:mga0a205_28769_c1
347 Ga0500641_0000908
348 Ga0500568_0003048
349 Ga0501084_0150223
350 Ga0501084_0278713
351 Ga0590071_005663
352 Ga0501082_0011914

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

53

418

0.89

PF07690

MFS_1

Major Facilitator Superfamily

279

461

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6e9o-assembly2.cif.gz_A e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.8344 28 416
6e9o-assembly1.cif.gz_B e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.8325 28 413
7t3n-assembly1.cif.gz_A r184q/e191q mutant of rat vesicular glutamate transporter 2 (vglut2) 0.8291 28 424
6e9o-assembly2.cif.gz_A e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.8089 28 416
7t3o-assembly1.cif.gz_A rat vesicular glutamate transporter 2 (vglut2) in low cl condition 0.8053 28 424
ID Description Score Start End Superfamily
af_O53919_11_216_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9674 23 226 1.20.1250.20
af_P40445_70_275_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9661 23 215 1.20.1250.20
af_Q9P6J0_33_240_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9652 21 225 1.20.1250.20
af_P76470_6_212_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9648 22 225 1.20.1250.20
af_A0A1D8PQZ7_87_288_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9647 23 214 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A4Q4XAQ3-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9855 16 234 GO:0016020
GO:0022857
AF-A0A349XYT3-F1-model_v4 MFS transporter 0.9808 23 211 GO:0016020
GO:0022857
AF-A0A2V8YM19-F1-model_v4 MFS transporter 0.9806 13 238 GO:0016020
GO:0022857
AF-A0A014EBJ3-F1-model_v4 deleted 0.9768 18 238
AF-J8VH03-F1-model_v4 deleted 0.9767 25 238

Map