F267632

General Info

Members Datasets Scaffolds Average Seq Length
176 97 348 765

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100051019|Ga0070670_1000510192
Length 833
Sequence MIDVSGECKFFASQVTEIRYDAIKRNQTSLHQTSKIFFMLKNYLKIAFRNLWKNKVYAAINIAGLAIGIAACIMIMLFVLYERSFDNFHTKNIYRLNEVQKFEGMVASQKVGLSMFPMGPTLKNEFPEIKNFTRVSWRDKYQMTQGENRLFLPHAYYVDSTFLQLFDYPLLKGNRATALEKPNSAVITEATALKLFGHANPIGKTITHYASDTISFIVTGVLQNIPQNSQQQFDALFSFSSIYRPQMMKNWGGNWLDTYLELAPNTNTIALEKRFPAYLKKYMANGDGWKFYELFLLPLKEVHAGATEIGLDYLNYQKFDKKYTNIFFAIGIIVLLIACINFMNLSTARSAERAKEVGIRKTIGARRWQLSTQFISESVILSFIALLFAVLFVKLLLPSVNNLSQRQLEFPFFTNAPTFFSIVAGTILIGILAGLYPAAYLSSFIPVKVLKGSVQTGSNKSLLRNILVVGQFSSAIFLMIATIFAVKQLNFMQATDPGFNREQVVTIPLDGITYRKFETVKQQLLANTLVKSVTAAQDQLGSHLDQTGVEFIGDSAKRQLTSTLLIVDHDYLSLYQIAVSSGKNFSTDPTQNGKEYIINEALAKELLKDNPKASPASLLGKHFGFDSAGIITGTIVGIAKNFNFNSLHYKIETLFLFNQKVKINGNKAAEAVSFIQSVWKKEYPDHPFDYQFLDDHFADVYRADTQVSSVVGVLTALAVVISCLGLFGLASYSAERRTKEVGIRKVLGASVQNITTMLSKDFLKYVVIATLIAWPLAWFAVHTWLQDYAYRIRISWWIFILAGFVACLIALVTISFQAIKAALANPVKSLRSE

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
80 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
81 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
87 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
88 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
91 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
92 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
95 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
96 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
97 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.55
Nodule 0
Rhizoplane 0
Rhizosphere 90.91
Stem 0
Stem Tuber 0
Unclassified 1.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100051019 3300005331 Bacteria 3554
2 JGI25162J39368_1000012 3300002737 Bacteria 373191
3 rootH2_10029462 3300003320 Bacteria 6637
4 rootL2_10086419 3300003322 Bacteria 3979
5 JGI25160J50197_1000856 3300003354 Bacteria 16153
6 Ga0070658_10000026 3300005327 Bacteria 171716
7 Ga0070683_100017118 3300005329 Bacteria 6400
8 Ga0070683_100019553 3300005329 Bacteria 6016
9 Ga0068869_100026804 3300005334 Bacteria 4013
10 Ga0070666_10001627 3300005335 Bacteria 13666
11 Ga0070680_100001356 3300005336 Bacteria 17717
12 Ga0070680_100013112 3300005336 Bacteria 6451
13 Ga0070691_10007913 3300005341 Bacteria 4862
14 Ga0070667_100020714 3300005367 Bacteria 5461
15 Ga0070662_100017528 3300005457 Bacteria 4830
16 Ga0070681_10072145 3300005458 Bacteria 3416
17 Ga0068867_100025214 3300005459 Bacteria 4266
18 Ga0070698_100003177 3300005471 Bacteria 18109
19 Ga0070679_100001543 3300005530 Bacteria 20556
20 Ga0070679_100061965 3300005530 Bacteria 3728
21 Ga0070679_100098714 3300005530 Bacteria 2908
22 Ga0070684_100029876 3300005535 Bacteria 4624
23 Ga0068853_100006608 3300005539 Bacteria 9231
24 Ga0068853_100051451 3300005539 Bacteria 3545
25 Ga0070665_100000031 3300005548 Bacteria 333365
26 Ga0068855_100000042 3300005563 Bacteria 149332
27 Ga0068855_100000134 3300005563 Bacteria 94864
28 Ga0068855_100001879 3300005563 Bacteria 26084
29 Ga0068855_100019250 3300005563 Bacteria 8205
30 Ga0068855_100021500 3300005563 Bacteria 7737
31 Ga0068855_100027687 3300005563 Bacteria 6781
32 Ga0068855_100072618 3300005563 Bacteria 3999
33 Ga0070664_100011667 3300005564 Bacteria 7130
34 Ga0068857_100007932 3300005577 Bacteria 9163
35 Ga0068856_100000368 3300005614 Bacteria 49479
36 Ga0068856_100025905 3300005614 Bacteria 5720
37 Ga0068852_100000555 3300005616 Bacteria 24521
38 Ga0068852_100004206 3300005616 Bacteria 10147
39 Ga0068852_100021941 3300005616 Bacteria 5110
40 Ga0068859_100007369 3300005617 Bacteria 11161
41 Ga0068864_100008676 3300005618 Bacteria 8387
42 Ga0068863_100004576 3300005841 Bacteria 13642
43 Ga0068860_100000082 3300005843 Bacteria 169805
44 Ga0068860_100003392 3300005843 Bacteria 16392
45 Ga0068860_100014410 3300005843 Bacteria 7745
46 Ga0068860_100054193 3300005843 Bacteria 3812
47 Ga0081540_1009572 3300005983 Bacteria 6667
48 Ga0081539_10000402 3300005985 Bacteria 92866
49 Ga0075366_10000486 3300006195 Bacteria 18359
50 Ga0097621_100006547 3300006237 Bacteria 8273
51 Ga0097621_100052003 3300006237 Bacteria 3336
52 Ga0068871_100003564 3300006358 Bacteria 10708
53 Ga0068871_100089622 3300006358 Unclassified 2561
54 Ga0075430_100010882 3300006846 Bacteria 7707
55 Ga0075429_100005721 3300006880 Bacteria 10727
56 Ga0097620_100007369 3300006931 Bacteria 11161
57 Ga0105240_10000039 3300009093 Bacteria 270117
58 Ga0105240_10000107 3300009093 Bacteria 171629
59 Ga0105240_10000180 3300009093 Bacteria 128683
60 Ga0105240_10004434 3300009093 Bacteria 21402
61 Ga0105240_10007096 3300009093 Bacteria 16330
62 Ga0105240_10008677 3300009093 Bacteria 14511
63 Ga0105240_10013507 3300009093 Bacteria 11211
64 Ga0105247_10004995 3300009101 Bacteria 8425
65 Ga0105241_10001868 3300009174 Bacteria 15968
66 Ga0105241_10004239 3300009174 Bacteria 10594
67 Ga0105241_10021139 3300009174 Bacteria 4810
68 Ga0105237_10000193 3300009545 Bacteria 86593
69 Ga0105237_10001304 3300009545 Bacteria 33170
70 Ga0105237_10003005 3300009545 Bacteria 20354
71 Ga0105237_10004155 3300009545 Bacteria 16872
72 Ga0105237_10010350 3300009545 Bacteria 9931
73 Ga0105237_10012722 3300009545 Bacteria 8854
74 Ga0105237_10048976 3300009545 Bacteria 4248
75 Ga0105237_10055628 3300009545 Unclassified 3963
76 Ga0105237_10062677 3300009545 Bacteria 3718
77 Ga0105238_10050256 3300009551 Bacteria 4197
78 Ga0105249_10040102 3300009553 Bacteria 4252
79 Ga0105249_10096478 3300009553 Bacteria 2774
80 Ga0105239_10000313 3300010375 Bacteria 71404
81 Ga0105239_10000600 3300010375 Bacteria 51444
82 Ga0105239_10001116 3300010375 Bacteria 37041
83 Ga0105239_10001335 3300010375 Bacteria 33242
84 Ga0105239_10002171 3300010375 Bacteria 25214
85 Ga0105239_10011973 3300010375 Bacteria 9671
86 Ga0105239_10014386 3300010375 Bacteria 8779
87 Ga0157373_10007889 3300013100 Bacteria 7921
88 Ga0157374_10040437 3300013296 Bacteria 4294
89 Ga0157378_10011549 3300013297 Bacteria 7733
90 Ga0157378_10057608 3300013297 Bacteria 3463
91 Ga0163162_10000483 3300013306 Bacteria 36950
92 Ga0163162_10004712 3300013306 Bacteria 13149
93 Ga0163162_10006168 3300013306 Bacteria 11613
94 Ga0157372_10002362 3300013307 Bacteria 20413
95 Ga0157372_10003449 3300013307 Bacteria 17061
96 Ga0157372_10006061 3300013307 Bacteria 12846
97 Ga0157372_10023333 3300013307 Bacteria 6705
98 Ga0157372_10066456 3300013307 Bacteria 4051
99 Ga0157379_10059269 3300014968 Bacteria 3423
100 Ga0157379_10106476 3300014968 Bacteria 2517
101 Ga0157376_10000992 3300014969 Bacteria 18512
102 Ga0209437_100041 3300025233 Bacteria 444465
103 Ga0207426_1000032 3300025302 Bacteria 457997
104 Ga0207710_10004693 3300025900 Bacteria 5931
105 Ga0207680_10000647 3300025903 Bacteria 16423
106 Ga0207705_10000040 3300025909 Bacteria 185735
107 Ga0207654_10007084 3300025911 Bacteria 5650
108 Ga0207654_10033802 3300025911 Bacteria 2837
109 Ga0207695_10000058 3300025913 Bacteria 366582
110 Ga0207695_10000060 3300025913 Bacteria 360217
111 Ga0207695_10000077 3300025913 Bacteria 307107
112 Ga0207695_10000199 3300025913 Bacteria 166179
113 Ga0207695_10010845 3300025913 Bacteria 11100
114 Ga0207695_10024501 3300025913 Bacteria 6786
115 Ga0207695_10076050 3300025913 Bacteria 3414
116 Ga0207671_10000511 3300025914 Bacteria 52535
117 Ga0207671_10000525 3300025914 Bacteria 51668
118 Ga0207671_10002382 3300025914 Bacteria 20195
119 Ga0207671_10003009 3300025914 Bacteria 17287
120 Ga0207671_10003790 3300025914 Bacteria 14838
121 Ga0207671_10008250 3300025914 Bacteria 8862
122 Ga0207652_10001212 3300025921 Bacteria 23146
123 Ga0207694_10037469 3300025924 Bacteria 3725
124 Ga0207650_10017287 3300025925 Bacteria 5047
125 Ga0207689_10030991 3300025942 Bacteria 4455
126 Ga0207689_10039224 3300025942 Bacteria 3921
127 Ga0207667_10000037 3300025949 Bacteria 297252
128 Ga0207667_10000598 3300025949 Bacteria 46822
129 Ga0207667_10001034 3300025949 Bacteria 35423
130 Ga0207667_10012007 3300025949 Bacteria 10024
131 Ga0207667_10052792 3300025949 Bacteria 4279
132 Ga0207712_10006782 3300025961 Bacteria 7220
133 Ga0207658_10014166 3300025986 Bacteria 5461
134 Ga0207703_10007634 3300026035 Bacteria 8575
135 Ga0207639_10050629 3300026041 Bacteria 3155
136 Ga0207702_10005133 3300026078 Bacteria 11517
137 Ga0207702_10044421 3300026078 Bacteria 3735
138 Ga0207641_10000200 3300026088 Bacteria 80556
139 Ga0207674_10003521 3300026116 Bacteria 19105
140 Ga0207683_10020944 3300026121 Bacteria 5596
141 Ga0207698_10002561 3300026142 Bacteria 10791
142 Ga0207698_10011684 3300026142 Bacteria 5706
143 Ga0268266_10000146 3300028379 Bacteria 135225
144 Ga0268264_10000013 3300028381 Bacteria 513859
145 Ga0268264_10001194 3300028381 Bacteria 25099
146 Ga0268264_10016411 3300028381 Bacteria 6062
147 Ga0268264_10027179 3300028381 Bacteria 4674
148 Ga0307517_10006393 3300028786 Bacteria 17467
149 Ga0307517_10014481 3300028786 Bacteria 10590
150 Ga0307515_10000074 3300028794 Bacteria 229874
151 Ga0307515_10000223 3300028794 Bacteria 140434
152 Ga0265327_10000051 3300031251 Bacteria 257963
153 Ga0265327_10020813 3300031251 Bacteria 3983
154 Ga0307516_10006749 3300031730 Bacteria 13411
155 Ga0307510_10005692 3300033180 Bacteria 14849
156 Ga0395899_0015305 3300037312 Bacteria 5845
157 Ga0395899_0023347 3300037312 Bacteria 4685
158 Ga0395900_0003569 3300037418 Bacteria 16729
159 Ga0395898_0001492 3300037466 Bacteria 32582
160 Ga0395905_0005009 3300037471 Bacteria 13642
161 Ga0395901_0096317 3300038443 Bacteria 3101
162 Ga0495616_0001549 3300046513 Bacteria 15841
163 Ga0495618_0024787 3300046514 Bacteria 3719
164 Ga0495611_0000042 3300046648 Bacteria 94996
165 Ga0495625_0001107 3300046660 Bacteria 34929
166 Ga0495625_0013190 3300046660 Bacteria 6654
167 Ga0495661_0004623 3300046665 Bacteria 9905
168 Ga0495686_0000264 3300047472 Bacteria 93838
169 Ga0501069_0039194 3300049585 Bacteria 2617
170 Ga0501070_0016368 3300049586 Bacteria 6228
171 Ga0501083_0010124 3300049744 Bacteria 6644
172 nmdc:mga0k408_16_c2 3300050493 Bacteria 101089
173 Ga0500608_002050 3300053122 Bacteria 7225
174 Ga0500624_000248 3300053157 Bacteria 19031
175 Ga0070670_100051019
176 JGI25162J39368_1000012
177 rootH2_10029462
178 rootL2_10086419
179 JGI25160J50197_1000856
180 Ga0070658_10000026
181 Ga0070683_100017118
182 Ga0070683_100019553
183 Ga0068869_100026804
184 Ga0070666_10001627
185 Ga0070680_100001356
186 Ga0070680_100013112
187 Ga0070691_10007913
188 Ga0070667_100020714
189 Ga0070662_100017528
190 Ga0070681_10072145
191 Ga0068867_100025214
192 Ga0070698_100003177
193 Ga0070679_100001543
194 Ga0070679_100061965
195 Ga0070679_100098714
196 Ga0070684_100029876
197 Ga0068853_100006608
198 Ga0068853_100051451
199 Ga0070665_100000031
200 Ga0068855_100000042
201 Ga0068855_100000134
202 Ga0068855_100001879
203 Ga0068855_100019250
204 Ga0068855_100021500
205 Ga0068855_100027687
206 Ga0068855_100072618
207 Ga0070664_100011667
208 Ga0068857_100007932
209 Ga0068856_100000368
210 Ga0068856_100025905
211 Ga0068852_100000555
212 Ga0068852_100004206
213 Ga0068852_100021941
214 Ga0068859_100007369
215 Ga0068864_100008676
216 Ga0068863_100004576
217 Ga0068860_100000082
218 Ga0068860_100003392
219 Ga0068860_100014410
220 Ga0068860_100054193
221 Ga0081540_1009572
222 Ga0081539_10000402
223 Ga0075366_10000486
224 Ga0097621_100006547
225 Ga0097621_100052003
226 Ga0068871_100003564
227 Ga0068871_100089622
228 Ga0075430_100010882
229 Ga0075429_100005721
230 Ga0097620_100007369
231 Ga0105240_10000039
232 Ga0105240_10000107
233 Ga0105240_10000180
234 Ga0105240_10004434
235 Ga0105240_10007096
236 Ga0105240_10008677
237 Ga0105240_10013507
238 Ga0105247_10004995
239 Ga0105241_10001868
240 Ga0105241_10004239
241 Ga0105241_10021139
242 Ga0105237_10000193
243 Ga0105237_10001304
244 Ga0105237_10003005
245 Ga0105237_10004155
246 Ga0105237_10010350
247 Ga0105237_10012722
248 Ga0105237_10048976
249 Ga0105237_10055628
250 Ga0105237_10062677
251 Ga0105238_10050256
252 Ga0105249_10040102
253 Ga0105249_10096478
254 Ga0105239_10000313
255 Ga0105239_10000600
256 Ga0105239_10001116
257 Ga0105239_10001335
258 Ga0105239_10002171
259 Ga0105239_10011973
260 Ga0105239_10014386
261 Ga0157373_10007889
262 Ga0157374_10040437
263 Ga0157378_10011549
264 Ga0157378_10057608
265 Ga0163162_10000483
266 Ga0163162_10004712
267 Ga0163162_10006168
268 Ga0157372_10002362
269 Ga0157372_10003449
270 Ga0157372_10006061
271 Ga0157372_10023333
272 Ga0157372_10066456
273 Ga0157379_10059269
274 Ga0157379_10106476
275 Ga0157376_10000992
276 Ga0209437_100041
277 Ga0207426_1000032
278 Ga0207710_10004693
279 Ga0207680_10000647
280 Ga0207705_10000040
281 Ga0207654_10007084
282 Ga0207654_10033802
283 Ga0207695_10000058
284 Ga0207695_10000060
285 Ga0207695_10000077
286 Ga0207695_10000199
287 Ga0207695_10010845
288 Ga0207695_10024501
289 Ga0207695_10076050
290 Ga0207671_10000511
291 Ga0207671_10000525
292 Ga0207671_10002382
293 Ga0207671_10003009
294 Ga0207671_10003790
295 Ga0207671_10008250
296 Ga0207652_10001212
297 Ga0207694_10037469
298 Ga0207650_10017287
299 Ga0207689_10030991
300 Ga0207689_10039224
301 Ga0207667_10000037
302 Ga0207667_10000598
303 Ga0207667_10001034
304 Ga0207667_10012007
305 Ga0207667_10052792
306 Ga0207712_10006782
307 Ga0207658_10014166
308 Ga0207703_10007634
309 Ga0207639_10050629
310 Ga0207702_10005133
311 Ga0207702_10044421
312 Ga0207641_10000200
313 Ga0207674_10003521
314 Ga0207683_10020944
315 Ga0207698_10002561
316 Ga0207698_10011684
317 Ga0268266_10000146
318 Ga0268264_10000013
319 Ga0268264_10001194
320 Ga0268264_10016411
321 Ga0268264_10027179
322 Ga0307517_10006393
323 Ga0307517_10014481
324 Ga0307515_10000074
325 Ga0307515_10000223
326 Ga0265327_10000051
327 Ga0265327_10020813
328 Ga0307516_10006749
329 Ga0307510_10005692
330 Ga0395899_0015305
331 Ga0395899_0023347
332 Ga0395900_0003569
333 Ga0395898_0001492
334 Ga0395905_0005009
335 Ga0395901_0096317
336 Ga0495616_0001549
337 Ga0495618_0024787
338 Ga0495611_0000042
339 Ga0495625_0001107
340 Ga0495625_0013190
341 Ga0495661_0004623
342 Ga0495686_0000264
343 Ga0501069_0039194
344 Ga0501070_0016368
345 Ga0501083_0010124
346 nmdc:mga0k408_16_c2
347 Ga0500608_002050
348 Ga0500624_000248

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

328

445

0.97

PF02687

FtsX

FtsX-like permease family

712

826

0.94

PF12704

MacB_PCD

MacB-like periplasmic core domain

58

278

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.8553 53 259
3is6-assembly1.cif.gz_A the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.8387 51 259
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7754 53 259
3is6-assembly1.cif.gz_A the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7439 51 259
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.7304 54 258
ID Description Score Start End Superfamily
2hiyB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;SP0830-like domains 0.6718 581 626 3.30.70.1280
af_Q22888_2_205_3.30.760.10 Alpha Beta;2-Layer Sandwich;RNA Cap, Translation Initiation Factor Eif4e;RNA Cap, Translation Initiation Factor Eif4e 0.6493 581 625 3.30.760.10
af_A1L200_18_226_3.30.760.10 Alpha Beta;2-Layer Sandwich;RNA Cap, Translation Initiation Factor Eif4e;RNA Cap, Translation Initiation Factor Eif4e 0.6343 581 626 3.30.760.10
5lq3C03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain like 0.6259 581 619 3.30.70.1320
4mt1A03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain like 0.6003 581 618 3.30.70.1320
ID Description Score Start End GO Terms
AF-A0A2J6I019-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.868 1 266 GO:0005886
GO:0022857
AF-A0A0S8JE32-F1-model_v4 Uncharacterized protein 0.8644 405 732 GO:0005886
GO:0022857
AF-A0A2J6I019-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.8525 1 266 GO:0005886
GO:0022857
AF-A0A846NR50-F1-model_v4 deleted 0.8489 1 259
AF-A0A7Y1VWD4-F1-model_v4 FtsX-like permease family protein 0.8391 3 721 GO:0005886
GO:0022857

Map