F267551

General Info

Members Datasets Scaffolds Average Seq Length
176 140 352 304

Family's Representative Sequence

Representative Sequence 3300005295|Ga0065707_10208230|Ga0065707_102082301
Length 336
Sequence VFRGSQGHGPGSRIDLRGFLPEDKRAYSISTMNTEFYAFGEILWDCLPSGRHAGGAPFNVTAHLVQLGASASLISAVGRDALGDEILKVAEDKGVNTELVTRARIGLATGTVLVTVDASGNATYELVQPVAWDEIRVLPEALKAVAQARGLIFGSLAGRSPYNLDQVNRLLAIEGPMKFFDVNLRPPFADPPLIIRLAKRADVIKLNDDEVGKLASWLKTGEATRNTPRTTETIAEACASLARATNTSRICVTRASDGAALWENGTLLCASAPQVTVKDTVGAGDSFMAGLMVGLTRGIDAKKVLEDACRVGAFVASHNGATPILPRELTERFKGA

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
51 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
52 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
53 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
54 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
55 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
58 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
59 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
60 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
61 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
67 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
70 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
71 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
72 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
73 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
76 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
77 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
78 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
79 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
80 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
86 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
87 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
92 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
93 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
100 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
124 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
127 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
128 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
129 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
130 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
131 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
132 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
133 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
134 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
135 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
136 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
137 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
138 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
139 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
140 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.32
Metatranscriptomes 0
Isolates 5.68

Biome Distribution

Category Percentage (%)
Aerial Root 1.14
Bulb 0
Endosphere 1.7
Nodule 0
Rhizoplane 3.98
Rhizosphere 86.93
Stem 0
Stem Tuber 0
Unclassified 18.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10208230 3300005295 Bacteria 1277
2 Ga0065704_10014866 3300005289 Bacteria 1840
3 Ga0065707_10027545 3300005295 Bacteria 2502
4 Ga0070683_100022440 3300005329 Bacteria 5642
5 Ga0070683_100027214 3300005329 Bacteria 5156
6 Ga0068868_100115021 3300005338 Bacteria 2189
7 Ga0070675_100039278 3300005354 Bacteria 3861
8 Ga0070709_10071149 3300005434 Bacteria 2244
9 Ga0070714_100046158 3300005435 Unclassified 3694
10 Ga0070705_100147774 3300005440 Bacteria 1555
11 Ga0070708_100208383 3300005445 Unclassified 1831
12 Ga0070663_100332030 3300005455 Bacteria 1226
13 Ga0070706_100003714 3300005467 Bacteria 14926
14 Ga0070706_100323264 3300005467 Unclassified 1438
15 Ga0070698_100077558 3300005471 Bacteria 3322
16 Ga0070699_100083664 3300005518 Bacteria 2783
17 Ga0070699_100280276 3300005518 Bacteria 1493
18 Ga0070684_100050020 3300005535 Bacteria 3629
19 Ga0070697_100037150 3300005536 Bacteria 3934
20 Ga0070697_100059047 3300005536 Bacteria 3122
21 Ga0070697_100069312 3300005536 Unclassified 2888
22 Ga0070697_100107478 3300005536 Bacteria 2322
23 Ga0070672_100201742 3300005543 Bacteria 1663
24 Ga0068856_100408364 3300005614 Unclassified 1378
25 Ga0081538_10111161 3300005981 Unclassified 1344
26 Ga0070717_10014103 3300006028 Bacteria 6142
27 Ga0070712_100124677 3300006175 Bacteria 1943
28 Ga0075367_10248117 3300006178 Bacteria 1116
29 Ga0075428_100410608 3300006844 Bacteria 1451
30 Ga0075434_100148311 3300006871 Bacteria 2366
31 Ga0105237_10143799 3300009545 Bacteria 2380
32 Ga0105239_10685933 3300010375 Unclassified 1171
33 Ga0157374_10099336 3300013296 Unclassified 2788
34 Ga0157374_10108277 3300013296 Bacteria 2671
35 Ga0157378_10099102 3300013297 Bacteria 2658
36 Ga0157378_10265115 3300013297 Bacteria 1650
37 Ga0157372_10182740 3300013307 Unclassified 2428
38 Ga0157375_10487494 3300013308 Bacteria 1397
39 Ga0163163_10564892 3300014325 Unclassified 1200
40 Ga0213876_10010246 3300021384 Bacteria 5033
41 Ga0207697_10000446 3300025315 Bacteria 23241
42 Ga0207697_10028391 3300025315 Unclassified 2288
43 Ga0207682_10059391 3300025893 Unclassified 1598
44 Ga0207699_10131763 3300025906 Bacteria 1632
45 Ga0207645_10006663 3300025907 Bacteria 8248
46 Ga0207684_10002630 3300025910 Bacteria 17962
47 Ga0207684_10124679 3300025910 Bacteria 2209
48 Ga0207671_10131771 3300025914 Unclassified 1919
49 Ga0207693_10041524 3300025915 Bacteria 3621
50 Ga0207663_10049482 3300025916 Bacteria 2607
51 Ga0207663_10109404 3300025916 Bacteria 1873
52 Ga0207659_10033625 3300025926 Bacteria 3531
53 Ga0207700_10369351 3300025928 Unclassified 1252
54 Ga0207665_10107085 3300025939 Bacteria 1959
55 Ga0207691_10110581 3300025940 Bacteria 2444
56 Ga0207661_10004950 3300025944 Bacteria 9342
57 Ga0207640_10151651 3300025981 Bacteria 1703
58 Ga0207678_10114733 3300026067 Bacteria 2298
59 Ga0207676_10336152 3300026095 Bacteria 1392
60 Ga0207683_10102105 3300026121 Unclassified 2561
61 Ga0265338_10098347 3300028800 Bacteria 2394
62 Ga0373926_0070337 3300035083 Unclassified 1285
63 Ga0373945_0003564 3300035116 Bacteria 4903
64 Ga0373954_0048934 3300035118 Bacteria 1981
65 Ga0373956_0005581 3300035119 Bacteria 5031
66 Ga0373957_0029232 3300035120 Bacteria 2013
67 Ga0373957_0089628 3300035120 Bacteria 1221
68 Ga0373943_0010975 3300035170 Bacteria 4071
69 Ga0373943_0025676 3300035170 Bacteria 2755
70 Ga0316574_0098476 3300035398 Bacteria 1870
71 Ga0373924_0034215 3300035410 Bacteria 2056
72 Ga0373935_0041359 3300035692 Bacteria 2895
73 Ga0373935_0285909 3300035692 Unclassified 1162
74 Ga0373927_0045343 3300035695 Unclassified 2844
75 Ga0373927_0048490 3300035695 Bacteria 2748
76 Ga0373927_0104689 3300035695 Bacteria 1842
77 Ga0373933_0013336 3300035724 Bacteria 4554
78 Ga0373947_0008021 3300035725 Bacteria 6091
79 Ga0373947_0048071 3300035725 Bacteria 2559
80 Ga0373947_0108140 3300035725 Unclassified 1754
81 Ga0373947_0109144 3300035725 Unclassified 1746
82 Ga0373937_0169159 3300036401 Bacteria 2050
83 Ga0395905_0050970 3300037471 Bacteria 3877
84 Ga0436364_0186587 3300037853 Bacteria 6937
85 Ga0436364_0608840 3300037853 Unclassified 1459
86 Ga0436365_0836244 3300039437 Bacteria 3587
87 Ga0436365_1266259 3300039437 Bacteria 4212
88 Ga0436365_1908517 3300039437 Bacteria 5053
89 Ga0436361_0181324 3300039447 Bacteria 3603
90 Ga0436363_0586266 3300039450 Bacteria 1547
91 Ga0436363_1647339 3300039450 Bacteria 10240
92 Ga0451577_0047211 3300042876 Bacteria 3851
93 Ga0451577_0240943 3300042876 Bacteria 1636
94 Ga0453683_0001404 3300044673 Bacteria 20934
95 Ga0466958_0009766 3300045836 Bacteria 5354
96 Ga0495592_0053371 3300046454 Bacteria 2998
97 Ga0495603_0004172 3300046455 Bacteria 8614
98 Ga0495629_0040086 3300046459 Bacteria 3295
99 Ga0495629_0100430 3300046459 Unclassified 2019
100 Ga0495651_0119353 3300046462 Unclassified 1939
101 Ga0495653_0009114 3300046463 Bacteria 8115
102 Ga0495580_0079769 3300046472 Bacteria 2282
103 Ga0495639_0020223 3300046475 Bacteria 2908
104 Ga0495664_0050332 3300046477 Bacteria 2474
105 Ga0495607_0024860 3300046501 Bacteria 3730
106 Ga0495608_0080087 3300046511 Bacteria 2123
107 Ga0495618_0225300 3300046514 Bacteria 1182
108 Ga0495628_0070591 3300046516 Bacteria 2723
109 Ga0495630_0002991 3300046517 Bacteria 11718
110 Ga0495630_0110089 3300046517 Unclassified 2086
111 Ga0495643_0061186 3300046522 Bacteria 1997
112 Ga0495665_0001592 3300046531 Bacteria 12146
113 Ga0495665_0042441 3300046531 Bacteria 2421
114 Ga0495640_0194324 3300046533 Unclassified 1289
115 Ga0495667_0102867 3300046559 Bacteria 1847
116 Ga0495635_0003158 3300046663 Bacteria 11351
117 Ga0495588_0004378 3300046674 Bacteria 6238
118 Ga0495657_0036312 3300046675 Bacteria 3406
119 Ga0495599_0012080 3300046678 Bacteria 5314
120 Ga0495623_0030242 3300046679 Bacteria 3483
121 Ga0495646_0001655 3300046680 Bacteria 13313
122 Ga0495658_0001689 3300046683 Bacteria 11481
123 Ga0495658_0080011 3300046683 Bacteria 1916
124 Ga0495669_0097576 3300046684 Bacteria 1362
125 Ga0495613_0057828 3300046689 Bacteria 2847
126 Ga0495670_0146836 3300046691 Bacteria 1236
127 Ga0495600_0014136 3300046809 Bacteria 5027
128 Ga0495581_0120546 3300047315 Unclassified 1526
129 Ga0495604_0005693 3300047317 Bacteria 9883
130 Ga0495604_0234286 3300047317 Bacteria 1258
131 Ga0495674_0008204 3300047319 Bacteria 9966
132 Ga0495680_0033442 3300047322 Bacteria 4163
133 Ga0495675_0085272 3300047444 Bacteria 1986
134 Ga0495684_0000583 3300047471 Bacteria 29477
135 Ga0495593_0006814 3300047673 Bacteria 6686
136 Ga0495593_0143422 3300047673 Bacteria 1210
137 Ga0495602_0024318 3300048088 Bacteria 5878
138 Ga0495614_0001330 3300048089 Bacteria 10657
139 Ga0496102_0383297 3300048905 Unclassified 1323
140 Ga0496103_0176466 3300048906 Bacteria 1373
141 Ga0496108_0340751 3300048911 Unclassified 1308
142 Ga0496110_0320119 3300048913 Bacteria 1413
143 Ga0496112_0230378 3300048915 Bacteria 1807
144 Ga0496115_0008589 3300048918 Bacteria 7561
145 Ga0496115_0176172 3300048918 Unclassified 1768
146 Ga0496125_0065616 3300048928 Bacteria 2874
147 Ga0501032_0035311 3300049569 Bacteria 3418
148 Ga0501033_0005043 3300049570 Bacteria 10515
149 Ga0501038_0211158 3300049574 Bacteria 1553
150 Ga0501043_0227533 3300049579 Unclassified 1441
151 Ga0501046_0005925 3300049580 Bacteria 10888
152 Ga0501046_0017523 3300049580 Bacteria 5973
153 Ga0501047_0027026 3300049581 Bacteria 5527
154 Ga0501047_0106758 3300049581 Unclassified 2681
155 Ga0501070_0048487 3300049586 Bacteria 3528
156 Ga0501080_0111055 3300049742 Bacteria 2541
157 Ga0501083_0006673 3300049744 Bacteria 8188
158 Ga0501083_0007510 3300049744 Bacteria 7724
159 Ga0501035_0077705 3300049822 Bacteria 2933
160 Ga0501035_0164349 3300049822 Unclassified 1920
161 Ga0501044_0014393 3300049823 Bacteria 8542
162 nmdc:mga0n895_506721_c1 3300050512 Bacteria 1215
163 Ga0495612_0007876 3300053078 Bacteria 4344
164 Ga0495619_0024433 3300053085 Bacteria 3876
165 Ga0500555_000024 3300053103 Bacteria 134279
166 Ga0500573_0114681 3300053140 Bacteria 1505
167 2511232653 2511231000 Bacteria 4488346
168 2585159327 2582581281 Bacteria 4487904
169 2585163586 2582581282 Bacteria 4495830
170 2740057468 2739367874 Bacteria 4872888
171 2945927455 2945924605 Bacteria 4296724
172 2958512242 2958512119 Bacteria 4528530
173 2977246082 2977243572 Bacteria 4374394
174 2984575809 2984572630 Bacteria 4186940
175 2984609265 2984606641 Bacteria 4186971
176 2993373596 2993372514 Bacteria 4214139
177 Ga0065707_10208230
178 Ga0065704_10014866
179 Ga0065707_10027545
180 Ga0070683_100022440
181 Ga0070683_100027214
182 Ga0068868_100115021
183 Ga0070675_100039278
184 Ga0070709_10071149
185 Ga0070714_100046158
186 Ga0070705_100147774
187 Ga0070708_100208383
188 Ga0070663_100332030
189 Ga0070706_100003714
190 Ga0070706_100323264
191 Ga0070698_100077558
192 Ga0070699_100083664
193 Ga0070699_100280276
194 Ga0070684_100050020
195 Ga0070697_100037150
196 Ga0070697_100059047
197 Ga0070697_100069312
198 Ga0070697_100107478
199 Ga0070672_100201742
200 Ga0068856_100408364
201 Ga0081538_10111161
202 Ga0070717_10014103
203 Ga0070712_100124677
204 Ga0075367_10248117
205 Ga0075428_100410608
206 Ga0075434_100148311
207 Ga0105237_10143799
208 Ga0105239_10685933
209 Ga0157374_10099336
210 Ga0157374_10108277
211 Ga0157378_10099102
212 Ga0157378_10265115
213 Ga0157372_10182740
214 Ga0157375_10487494
215 Ga0163163_10564892
216 Ga0213876_10010246
217 Ga0207697_10000446
218 Ga0207697_10028391
219 Ga0207682_10059391
220 Ga0207699_10131763
221 Ga0207645_10006663
222 Ga0207684_10002630
223 Ga0207684_10124679
224 Ga0207671_10131771
225 Ga0207693_10041524
226 Ga0207663_10049482
227 Ga0207663_10109404
228 Ga0207659_10033625
229 Ga0207700_10369351
230 Ga0207665_10107085
231 Ga0207691_10110581
232 Ga0207661_10004950
233 Ga0207640_10151651
234 Ga0207678_10114733
235 Ga0207676_10336152
236 Ga0207683_10102105
237 Ga0265338_10098347
238 Ga0373926_0070337
239 Ga0373945_0003564
240 Ga0373954_0048934
241 Ga0373956_0005581
242 Ga0373957_0029232
243 Ga0373957_0089628
244 Ga0373943_0010975
245 Ga0373943_0025676
246 Ga0316574_0098476
247 Ga0373924_0034215
248 Ga0373935_0041359
249 Ga0373935_0285909
250 Ga0373927_0045343
251 Ga0373927_0048490
252 Ga0373927_0104689
253 Ga0373933_0013336
254 Ga0373947_0008021
255 Ga0373947_0048071
256 Ga0373947_0108140
257 Ga0373947_0109144
258 Ga0373937_0169159
259 Ga0395905_0050970
260 Ga0436364_0186587
261 Ga0436364_0608840
262 Ga0436365_0836244
263 Ga0436365_1266259
264 Ga0436365_1908517
265 Ga0436361_0181324
266 Ga0436363_0586266
267 Ga0436363_1647339
268 Ga0451577_0047211
269 Ga0451577_0240943
270 Ga0453683_0001404
271 Ga0466958_0009766
272 Ga0495592_0053371
273 Ga0495603_0004172
274 Ga0495629_0040086
275 Ga0495629_0100430
276 Ga0495651_0119353
277 Ga0495653_0009114
278 Ga0495580_0079769
279 Ga0495639_0020223
280 Ga0495664_0050332
281 Ga0495607_0024860
282 Ga0495608_0080087
283 Ga0495618_0225300
284 Ga0495628_0070591
285 Ga0495630_0002991
286 Ga0495630_0110089
287 Ga0495643_0061186
288 Ga0495665_0001592
289 Ga0495665_0042441
290 Ga0495640_0194324
291 Ga0495667_0102867
292 Ga0495635_0003158
293 Ga0495588_0004378
294 Ga0495657_0036312
295 Ga0495599_0012080
296 Ga0495623_0030242
297 Ga0495646_0001655
298 Ga0495658_0001689
299 Ga0495658_0080011
300 Ga0495669_0097576
301 Ga0495613_0057828
302 Ga0495670_0146836
303 Ga0495600_0014136
304 Ga0495581_0120546
305 Ga0495604_0005693
306 Ga0495604_0234286
307 Ga0495674_0008204
308 Ga0495680_0033442
309 Ga0495675_0085272
310 Ga0495684_0000583
311 Ga0495593_0006814
312 Ga0495593_0143422
313 Ga0495602_0024318
314 Ga0495614_0001330
315 Ga0496102_0383297
316 Ga0496103_0176466
317 Ga0496108_0340751
318 Ga0496110_0320119
319 Ga0496112_0230378
320 Ga0496115_0008589
321 Ga0496115_0176172
322 Ga0496125_0065616
323 Ga0501032_0035311
324 Ga0501033_0005043
325 Ga0501038_0211158
326 Ga0501043_0227533
327 Ga0501046_0005925
328 Ga0501046_0017523
329 Ga0501047_0027026
330 Ga0501047_0106758
331 Ga0501070_0048487
332 Ga0501080_0111055
333 Ga0501083_0006673
334 Ga0501083_0007510
335 Ga0501035_0077705
336 Ga0501035_0164349
337 Ga0501044_0014393
338 nmdc:mga0n895_506721_c1
339 Ga0495612_0007876
340 Ga0495619_0024433
341 Ga0500555_000024
342 Ga0500573_0114681
343 2511232653
344 2585159327
345 2585163586
346 2740057468
347 2945927455
348 2958512242
349 2977246082
350 2984575809
351 2984609265
352 2993373596

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

28

328

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qhp-assembly1.cif.gz_A crystal structure of fructokinase (np_810670.1) from bacteroides thetaiotaomicron vpi-5482 at 1.80 a resolution 0.8924 4 303
2qhp-assembly1.cif.gz_A crystal structure of fructokinase (np_810670.1) from bacteroides thetaiotaomicron vpi-5482 at 1.80 a resolution 0.8865 4 303
2afb-assembly1.cif.gz_B crystal structure of 2-dehydro-3- deoxygluconokinase (ec 2.7.1.45) (tm0067) from thermotoga maritima at 2.05 a resolution 0.8754 5 302
3pl2-assembly2.cif.gz_D crystal structure of a 5-keto-2-deoxygluconokinase (ncgl0155, cgl0158) from corynebacterium glutamicum atcc 13032 kitasato at 1.89 a resolution 0.8657 1 301
2v78-assembly1.cif.gz_A crystal structure of sulfolobus solfataricus 2-keto-3-deoxygluconate kinase 0.8565 4 302
ID Description Score Start End Superfamily
2qhpA00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9069 4 303 3.40.1190.20
2qhpA00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9008 4 303 3.40.1190.20
af_P45543_2_261_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8756 5 290 3.40.1190.20
3pl2D01 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8661 3 301 3.40.1190.20
af_P45543_2_261_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8632 5 290 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A838DHA3-F1-model_v4 Carbohydrate kinase 0.9583 214 303 GO:0006796
GO:0016301
AF-A0A7D4PZG0-F1-model_v4 Carbohydrate kinase 0.9469 1 299 GO:0006000
GO:0008865
AF-A0A7D4PZG0-F1-model_v4 Carbohydrate kinase 0.9405 1 299 GO:0006000
GO:0008865
AF-A0A154U561-F1-model_v4 deleted 0.9334 5 122
AF-A0A2E7MMS8-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9327 1 303 GO:0016301

Map