F267537

General Info

Members Datasets Scaffolds Average Seq Length
176 109 352 972

Family's Representative Sequence

Representative Sequence 3300005290|Ga0065712_10076155|Ga0065712_100761551
Length 1005
Sequence MRYRFMTLLTALVLAVGGGRLMAQETTGAVTGRITDPQGLAVPGVTLTLTGPQGTKAVVTDAEGRFNAPLLVPGTYVVKAELVGFKTVQQSNVIVRLGQSIEVNLKMDVGGVAETIEVNATSPIIDTRSTTVGAVLDSETLANIPIGRRFSDTLYIAPGVTSSGSAGRSNPSMAGGSGLDNAYVVDGVNITNAGYGALGSYSIIFGSLGNGTPYDFIKEVQVKTGGYEAEYGQAIGGVVNVVTKSGTNLMHGSAFGYARPQGMEGTWKQYESKNGTVQTLGSDLSDLGGTIGGPIMKNKLFYFGAIDPSWDTRTFQAPNNQDADGNYQFPLYAQGGIDRKREITSYSAKATYNVSSNQHVDVSFFGDPAHGDNGPQRTSALLAQDTSQYSELKKFGGNNQTVSYNGVFSPKLVVEAAYSHARNEIQEVPSVDTWNVTDFRVVPNIVTGGIGFYEAGNDGKNSQYQAKATTNLHNHQIRYGFLLEDINYDNINQRTGPTFTAPNGQQTATGAVISILPEVTGLGQIYRVTRANFISARQTRQQYADWFVQDTFTLGDRLTIRPGLRYERQKLIGQLASETGTTDNDFTLSGNWAPRVGATYDVLGNGRSKIFANWGRFYSKIPNDLAARALSADAGISRADYYDANLTQPIPDGTLTITQTPGSDQQATTSHFLQQGLSADLIDPNAKSSYEEEFVAGVEYEVKPSVNVGVNYIHRSIPRVLEDVGPYPVGACDFLGVGCSFDYTLTNPGPNTPVLTDLGASYEKPIHKYDAVQFTVDKRFGNRWGLQASYTWSRLYGTFEGFYREDNGQSDPGITSLYDFPTNDPSYTAIGGQPPYNFLGDIRYLGSLGAGPLPLDRPHVIKAFGNYTFDMGLNLGVGLTMNSGAPLTELASNPNYENGGEIPTTPRGAGFQTIDGFKTRTPFEYSADMHVDYAFKFKAMGGNRLVVLADFFNLFNLQRTTGYDNFIELEKGVTNPDFGAPVSEIVAGPQYQAPRQIRIGARFEF

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
65 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
73 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
74 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
75 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
76 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
77 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
78 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
79 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
80 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
81 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
84 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
85 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
86 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
87 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
88 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
96 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
97 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
98 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
99 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
100 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
102 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
103 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
104 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
107 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
108 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
109 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.45
Metatranscriptomes 4.55
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.84
Nodule 0
Rhizoplane 11.36
Rhizosphere 85.23
Stem 0
Stem Tuber 0
Unclassified 10.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10076155 3300005290 Bacteria 3719
2 Ga0007429J51699_1031698 3300003579 Bacteria 3154
3 Ga0032354_1017565 3300003693 Unclassified 3159
4 Ga0058860_12002672 3300004801 Bacteria 3090
5 Ga0065712_10000703 3300005290 Bacteria 13284
6 Ga0065712_10004576 3300005290 Bacteria 4956
7 Ga0065712_10068118 3300005290 Bacteria 14523
8 Ga0065712_10068457 3300005290 Bacteria 10527
9 Ga0065715_10004840 3300005293 Bacteria 3673
10 Ga0065715_10004933 3300005293 Bacteria 3751
11 Ga0065715_10090073 3300005293 Bacteria 7743
12 Ga0065707_10095103 3300005295 Bacteria 3412
13 Ga0070683_100001093 3300005329 Bacteria 20437
14 Ga0070683_100012742 3300005329 Bacteria 7312
15 Ga0070670_100013908 3300005331 Bacteria 6901
16 Ga0070670_100024412 3300005331 Bacteria 5198
17 Ga0070670_100042048 3300005331 Bacteria 3927
18 Ga0070670_100050533 3300005331 Unclassified 3572
19 Ga0070666_10019300 3300005335 Bacteria 4399
20 Ga0070661_100030835 3300005344 Bacteria 3875
21 Ga0070674_100000297 3300005356 Bacteria 24386
22 Ga0070674_100014713 3300005356 Bacteria 4868
23 Ga0070673_100002918 3300005364 Bacteria 10533
24 Ga0070688_100021784 3300005365 Bacteria 3748
25 Ga0070662_100002579 3300005457 Bacteria 11170
26 Ga0070685_10011460 3300005466 Bacteria 4640
27 Ga0070707_100045771 3300005468 Unclassified 4187
28 Ga0070698_100024043 3300005471 Bacteria 6360
29 Ga0070684_100022174 3300005535 Bacteria 5293
30 Ga0070693_100007465 3300005547 Bacteria 5347
31 Ga0070665_100007737 3300005548 Bacteria 10908
32 Ga0070664_100005509 3300005564 Bacteria 10165
33 Ga0068859_100005430 3300005617 Bacteria 12965
34 Ga0068859_100030627 3300005617 Bacteria 5400
35 Ga0068861_100016819 3300005719 Bacteria 5183
36 Ga0068861_100044062 3300005719 Bacteria 3353
37 Ga0068863_100023642 3300005841 Bacteria 5866
38 Ga0068858_100022480 3300005842 Bacteria 5885
39 Ga0068858_100033328 3300005842 Bacteria 4781
40 Ga0068858_100044849 3300005842 Unclassified 4098
41 Ga0068858_100054277 3300005842 Bacteria 3706
42 Ga0097621_100005549 3300006237 Bacteria 8892
43 Ga0068871_100008294 3300006358 Bacteria 7467
44 Ga0075428_100000701 3300006844 Bacteria 34589
45 Ga0075428_100002105 3300006844 Bacteria 21466
46 Ga0075428_100040134 3300006844 Bacteria 5151
47 Ga0075428_100049828 3300006844 Bacteria 4595
48 Ga0075430_100001558 3300006846 Bacteria 18760
49 Ga0075430_100015475 3300006846 Bacteria 6493
50 Ga0075431_100000102 3300006847 Bacteria 53476
51 Ga0075431_100001280 3300006847 Bacteria 22940
52 Ga0075431_100032376 3300006847 Bacteria 5387
53 Ga0075433_10004721 3300006852 Bacteria 10623
54 Ga0075434_100002381 3300006871 Bacteria 16508
55 Ga0075434_100020320 3300006871 Bacteria 6439
56 Ga0075434_100045245 3300006871 Bacteria 4366
57 Ga0075429_100001086 3300006880 Bacteria 21851
58 Ga0068865_100033556 3300006881 Bacteria 3437
59 Ga0097620_100005430 3300006931 Bacteria 12965
60 Ga0097620_100030627 3300006931 Bacteria 5400
61 Ga0075435_100002128 3300007076 Bacteria 13038
62 Ga0075435_100003927 3300007076 Bacteria 10160
63 Ga0075435_100038739 3300007076 Unclassified 3801
64 Ga0105240_10004525 3300009093 Bacteria 21129
65 Ga0111539_10015956 3300009094 Bacteria 9331
66 Ga0114129_10000291 3300009147 Bacteria 57858
67 Ga0114129_10003629 3300009147 Bacteria 21712
68 Ga0114129_10008154 3300009147 Bacteria 14931
69 Ga0114129_10010953 3300009147 Bacteria 12917
70 Ga0114129_10025490 3300009147 Bacteria 8380
71 Ga0114129_10118535 3300009147 Bacteria 3646
72 Ga0105243_10018493 3300009148 Bacteria 5280
73 Ga0105248_10020940 3300009177 Bacteria 7248
74 Ga0157380_10001869 3300014326 Bacteria 13935
75 Ga0157380_10012779 3300014326 Bacteria 6099
76 Ga0163161_10008030 3300017792 Bacteria 7300
77 Ga0163161_10024025 3300017792 Unclassified 4302
78 Ga0197907_10880286 3300020069 Bacteria 3311
79 Ga0206350_10795926 3300020080 Bacteria 3014
80 Ga0224712_10005417 3300022467 Unclassified 3550
81 Ga0224712_10008450 3300022467 Bacteria 3053
82 Ga0207682_10006450 3300025893 Bacteria 4724
83 Ga0207645_10002997 3300025907 Bacteria 13045
84 Ga0207695_10030273 3300025913 Bacteria 5961
85 Ga0207662_10004889 3300025918 Bacteria 7087
86 Ga0207650_10020016 3300025925 Bacteria 4713
87 Ga0207706_10014309 3300025933 Bacteria 7191
88 Ga0207706_10067376 3300025933 Bacteria 3149
89 Ga0207704_10023009 3300025938 Bacteria 3351
90 Ga0207691_10043141 3300025940 Bacteria 4157
91 Ga0207661_10001859 3300025944 Bacteria 14452
92 Ga0207679_10001867 3300025945 Bacteria 13094
93 Ga0207679_10027562 3300025945 Bacteria 3931
94 Ga0207658_10025768 3300025986 Bacteria 4118
95 Ga0207648_10021734 3300026089 Bacteria 5765
96 Ga0207648_10040465 3300026089 Bacteria 4095
97 Ga0207675_100006258 3300026118 Bacteria 11299
98 Ga0207675_100008147 3300026118 Bacteria 9878
99 Ga0207675_100023753 3300026118 Bacteria 5704
100 Ga0207675_100051384 3300026118 Bacteria 3846
101 Ga0207683_10051670 3300026121 Bacteria 3601
102 Ga0207698_10024852 3300026142 Bacteria 4211
103 Ga0207428_10001583 3300027907 Bacteria 23694
104 Ga0268266_10023546 3300028379 Bacteria 5241
105 Ga0307408_100022406 3300031548 Unclassified 4291
106 Ga0307413_10012800 3300031824 Unclassified 4189
107 Ga0307410_10019744 3300031852 Unclassified 4106
108 Ga0307406_10010304 3300031901 Bacteria 5269
109 Ga0307409_100004201 3300031995 Bacteria 8026
110 Ga0307416_100011681 3300032002 Bacteria 5875
111 Ga0307411_10026740 3300032005 Unclassified 3478
112 Ga0307415_100013467 3300032126 Bacteria 4775
113 Ga0373930_0000928 3300034816 Bacteria 4195
114 Ga0373959_0000869 3300034820 Bacteria 5111
115 Ga0373949_0000940 3300035090 Bacteria 9066
116 Ga0373951_0001629 3300035091 Bacteria 5886
117 Ga0373952_0000915 3300035092 Bacteria 5356
118 Ga0373932_0000108 3300035112 Bacteria 22710
119 Ga0373939_0000263 3300035114 Bacteria 14067
120 Ga0373941_0000248 3300035115 Bacteria 10368
121 Ga0373942_0000444 3300035207 Bacteria 11603
122 Ga0373962_0001350 3300035242 Bacteria 5791
123 Ga0451576_0003333 3300045051 Bacteria 22247
124 Ga0451576_0033304 3300045051 Bacteria 5477
125 Ga0495594_0016179 3300046499 Bacteria 3927
126 Ga0496101_0003339 3300048904 Bacteria 9995
127 Ga0496102_0069168 3300048905 Unclassified 3241
128 Ga0496104_0001298 3300048907 Bacteria 21543
129 Ga0496104_0004954 3300048907 Bacteria 11622
130 Ga0496104_0020852 3300048907 Bacteria 6010
131 Ga0496106_0013712 3300048909 Bacteria 5986
132 Ga0496107_0005928 3300048910 Bacteria 8376
133 Ga0496108_0003233 3300048911 Bacteria 13100
134 Ga0496108_0004501 3300048911 Bacteria 11226
135 Ga0496108_0004650 3300048911 Bacteria 11068
136 Ga0496109_0008572 3300048912 Bacteria 8699
137 Ga0496109_0018047 3300048912 Bacteria 6194
138 Ga0496109_0037975 3300048912 Unclassified 4352
139 Ga0496110_0001975 3300048913 Bacteria 15252
140 Ga0496110_0002299 3300048913 Bacteria 14289
141 Ga0496110_0060290 3300048913 Bacteria 3345
142 Ga0496112_0000269 3300048915 Bacteria 33513
143 Ga0496112_0029488 3300048915 Bacteria 5306
144 Ga0496112_0079402 3300048915 Bacteria 3245
145 Ga0496114_0000405 3300048917 Bacteria 31894
146 Ga0501323_000723 3300049539 Bacteria 2603
147 nmdc:mga05p37_181212_c1 3300050507 Bacteria 2562
148 nmdc:mga05p37_3639_c1 3300050507 Bacteria 18018
149 nmdc:mga05p37_563_c1 3300050507 Bacteria 40811
150 nmdc:mga05p37_73547_c1 3300050507 Unclassified 4206
151 nmdc:mga09592_738_c1 3300050508 Bacteria 25193
152 nmdc:mga06r32_2601_c1 3300050510 Bacteria 16117
153 nmdc:mga06r32_67136_c1 3300050510 Unclassified 3462
154 nmdc:mga08y16_10293_c1 3300050511 Bacteria 9816
155 nmdc:mga08y16_12517_c1 3300050511 Bacteria 8924
156 nmdc:mga08y16_23504_c1 3300050511 Bacteria 6513
157 nmdc:mga08y16_5171_c1 3300050511 Bacteria 13622
158 nmdc:mga0n895_30965_c1 3300050512 Bacteria 5118
159 nmdc:mga0n895_51371_c1 3300050512 Bacteria 4044
160 nmdc:mga0n895_55439_c1 3300050512 Bacteria 3901
161 nmdc:mga0n895_71277_c1 3300050512 Unclassified 3446
162 nmdc:mga0rr50_15809_c1 3300050513 Bacteria 4991
163 nmdc:mga0rr50_2133_c1 3300050513 Bacteria 11063
164 nmdc:mga0rr50_31264_c1 3300050513 Unclassified 3779
165 nmdc:mga0a205_1110_c1 3300050515 Bacteria 22302
166 nmdc:mga0a205_139_c1 3300050515 Bacteria 46008
167 nmdc:mga0a205_6665_c1 3300050515 Bacteria 10448
168 Ga0495619_0007927 3300053085 Bacteria 6720
169 Ga0500641_0002512 3300053096 Bacteria 6480
170 Ga0500555_000078 3300053103 Bacteria 46576
171 Ga0500555_006760 3300053103 Unclassified 3258
172 Ga0500616_0000549 3300053153 Bacteria 46665
173 Ga0500645_003900 3300053730 Bacteria 5894
174 Ga0590071_001109 3300059421 Bacteria 7287
175 Ga0590075_000776 3300059424 Bacteria 8418
176 Ga0590077_000943 3300059426 Bacteria 7415
177 Ga0065712_10076155
178 Ga0007429J51699_1031698
179 Ga0032354_1017565
180 Ga0058860_12002672
181 Ga0065712_10000703
182 Ga0065712_10004576
183 Ga0065712_10068118
184 Ga0065712_10068457
185 Ga0065715_10004840
186 Ga0065715_10004933
187 Ga0065715_10090073
188 Ga0065707_10095103
189 Ga0070683_100001093
190 Ga0070683_100012742
191 Ga0070670_100013908
192 Ga0070670_100024412
193 Ga0070670_100042048
194 Ga0070670_100050533
195 Ga0070666_10019300
196 Ga0070661_100030835
197 Ga0070674_100000297
198 Ga0070674_100014713
199 Ga0070673_100002918
200 Ga0070688_100021784
201 Ga0070662_100002579
202 Ga0070685_10011460
203 Ga0070707_100045771
204 Ga0070698_100024043
205 Ga0070684_100022174
206 Ga0070693_100007465
207 Ga0070665_100007737
208 Ga0070664_100005509
209 Ga0068859_100005430
210 Ga0068859_100030627
211 Ga0068861_100016819
212 Ga0068861_100044062
213 Ga0068863_100023642
214 Ga0068858_100022480
215 Ga0068858_100033328
216 Ga0068858_100044849
217 Ga0068858_100054277
218 Ga0097621_100005549
219 Ga0068871_100008294
220 Ga0075428_100000701
221 Ga0075428_100002105
222 Ga0075428_100040134
223 Ga0075428_100049828
224 Ga0075430_100001558
225 Ga0075430_100015475
226 Ga0075431_100000102
227 Ga0075431_100001280
228 Ga0075431_100032376
229 Ga0075433_10004721
230 Ga0075434_100002381
231 Ga0075434_100020320
232 Ga0075434_100045245
233 Ga0075429_100001086
234 Ga0068865_100033556
235 Ga0097620_100005430
236 Ga0097620_100030627
237 Ga0075435_100002128
238 Ga0075435_100003927
239 Ga0075435_100038739
240 Ga0105240_10004525
241 Ga0111539_10015956
242 Ga0114129_10000291
243 Ga0114129_10003629
244 Ga0114129_10008154
245 Ga0114129_10010953
246 Ga0114129_10025490
247 Ga0114129_10118535
248 Ga0105243_10018493
249 Ga0105248_10020940
250 Ga0157380_10001869
251 Ga0157380_10012779
252 Ga0163161_10008030
253 Ga0163161_10024025
254 Ga0197907_10880286
255 Ga0206350_10795926
256 Ga0224712_10005417
257 Ga0224712_10008450
258 Ga0207682_10006450
259 Ga0207645_10002997
260 Ga0207695_10030273
261 Ga0207662_10004889
262 Ga0207650_10020016
263 Ga0207706_10014309
264 Ga0207706_10067376
265 Ga0207704_10023009
266 Ga0207691_10043141
267 Ga0207661_10001859
268 Ga0207679_10001867
269 Ga0207679_10027562
270 Ga0207658_10025768
271 Ga0207648_10021734
272 Ga0207648_10040465
273 Ga0207675_100006258
274 Ga0207675_100008147
275 Ga0207675_100023753
276 Ga0207675_100051384
277 Ga0207683_10051670
278 Ga0207698_10024852
279 Ga0207428_10001583
280 Ga0268266_10023546
281 Ga0307408_100022406
282 Ga0307413_10012800
283 Ga0307410_10019744
284 Ga0307406_10010304
285 Ga0307409_100004201
286 Ga0307416_100011681
287 Ga0307411_10026740
288 Ga0307415_100013467
289 Ga0373930_0000928
290 Ga0373959_0000869
291 Ga0373949_0000940
292 Ga0373951_0001629
293 Ga0373952_0000915
294 Ga0373932_0000108
295 Ga0373939_0000263
296 Ga0373941_0000248
297 Ga0373942_0000444
298 Ga0373962_0001350
299 Ga0451576_0003333
300 Ga0451576_0033304
301 Ga0495594_0016179
302 Ga0496101_0003339
303 Ga0496102_0069168
304 Ga0496104_0001298
305 Ga0496104_0004954
306 Ga0496104_0020852
307 Ga0496106_0013712
308 Ga0496107_0005928
309 Ga0496108_0003233
310 Ga0496108_0004501
311 Ga0496108_0004650
312 Ga0496109_0008572
313 Ga0496109_0018047
314 Ga0496109_0037975
315 Ga0496110_0001975
316 Ga0496110_0002299
317 Ga0496110_0060290
318 Ga0496112_0000269
319 Ga0496112_0029488
320 Ga0496112_0079402
321 Ga0496114_0000405
322 Ga0501323_000723
323 nmdc:mga05p37_181212_c1
324 nmdc:mga05p37_3639_c1
325 nmdc:mga05p37_563_c1
326 nmdc:mga05p37_73547_c1
327 nmdc:mga09592_738_c1
328 nmdc:mga06r32_2601_c1
329 nmdc:mga06r32_67136_c1
330 nmdc:mga08y16_10293_c1
331 nmdc:mga08y16_12517_c1
332 nmdc:mga08y16_23504_c1
333 nmdc:mga08y16_5171_c1
334 nmdc:mga0n895_30965_c1
335 nmdc:mga0n895_51371_c1
336 nmdc:mga0n895_55439_c1
337 nmdc:mga0n895_71277_c1
338 nmdc:mga0rr50_15809_c1
339 nmdc:mga0rr50_2133_c1
340 nmdc:mga0rr50_31264_c1
341 nmdc:mga0a205_1110_c1
342 nmdc:mga0a205_139_c1
343 nmdc:mga0a205_6665_c1
344 Ga0495619_0007927
345 Ga0500641_0002512
346 Ga0500555_000078
347 Ga0500555_006760
348 Ga0500616_0000549
349 Ga0500645_003900
350 Ga0590071_001109
351 Ga0590075_000776
352 Ga0590077_000943

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

29

108

0.96

PF07715

Plug

TonB-dependent Receptor Plug Domain

126

238

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8978 28 108
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8668 28 108
4u3s-assembly1.cif.gz_B crystal structure of coh3scab-xdoc_m1scaa complex: a n-terminal interface mutant of type ii cohesin-x-dockerin complex from acetivibrio cellulolyticus 0.8246 26 112
4wi0-assembly1.cif.gz_B crystal structure of coh3scab-xdoc_m2scaa complex: a c-terminal interface mutant of type ii cohesin-x-dockerin complex from acetivibrio cellulolyticus 0.8243 26 112
4v4c-assembly3.cif.gz_F crystal structure of pyrogallol-phloroglucinol transhydroxylase from pelobacter acidigallici 0.8104 24 106
ID Description Score Start End Superfamily
af_E7FFQ7_314_405_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9017 28 108 2.60.40.1120
af_E7FFQ7_1118_1203_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8906 28 107 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8828 28 108 2.60.40.1120
af_P15087_375_469_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8674 28 107 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8626 28 108 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A1V5V9Y6-F1-model_v4 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA (EC 3.1.4.17) 0.9325 25 108 GO:0004118
GO:0004119
GO:0005737
GO:0030246
AF-A0A429CMD1-F1-model_v4 deleted 0.9082 24 109
AF-A0A7X7URQ7-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9064 25 106 GO:0004180
GO:0030246
AF-A0A2V7UJC3-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.8811 25 111
AF-A0A355UVY8-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.8678 25 116

Map