F267126

General Info

Members Datasets Scaffolds Average Seq Length
175 106 350 282

Family's Representative Sequence

Representative Sequence 3300049577|Ga0501041_0252633|Ga0501041_0252633_93_1061
Length 322
Sequence VGRSTSTPTTERIPQIEDIWRDRPGNRRRGRRIFGMSKRAVIAVPLMLAVAACAPADEGDDTAAEPTPTAADQCEKENLALLTPGTLTIGTDSPAYDPWFRKNDPTNGQGYESAVAYAVAERLGFTEDEVEWVKVPFNTSYKPGEKSFDFDINQISITDAREEVVDFSDGYYQASQGVIALKDSPVADVTTVDELAGYNLGAQTGTTSLTAIRDVIQPDSEPAVFEDTNAAKQALQNGQVDAILADLPTAFYITAVEIPQGTIIGQFQPETGEQEEFGMLFEQGSELVPCVNEALAELREDGTLDQIEQEWLSDTVGVPELQ

Samples

Sample ID Description Type Environment
1 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
28 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
29 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
39 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
41 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
42 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
43 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
44 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
45 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
46 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
47 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
53 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
54 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
57 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
58 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
59 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
60 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
61 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
62 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
63 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
66 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
67 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
68 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
69 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
70 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
81 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
82 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
83 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
84 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
87 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
88 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
89 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
90 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
94 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
95 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
96 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
97 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
98 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
99 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
100 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
101 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
104 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
105 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
106 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.43
Metatranscriptomes 0
Isolates 0.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.29
Nodule 0
Rhizoplane 19.43
Rhizosphere 65.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501041_0252633 3300049577 Bacteria 1108
2 Ga0070683_100004062 3300005329 Bacteria 11988
3 Ga0070683_100490760 3300005329 Bacteria 1173
4 Ga0070682_100029007 3300005337 Bacteria 3331
5 Ga0070675_100060080 3300005354 Bacteria 3138
6 Ga0070674_100373076 3300005356 Bacteria 1159
7 Ga0070667_100009329 3300005367 Bacteria 8135
8 Ga0070667_100161907 3300005367 Bacteria 1971
9 Ga0070714_100001550 3300005435 Bacteria 16732
10 Ga0070701_10122510 3300005438 Bacteria 1467
11 Ga0070678_100339942 3300005456 Bacteria 1287
12 Ga0070685_10041679 3300005466 Bacteria 2617
13 Ga0070684_100210076 3300005535 Bacteria 1774
14 Ga0070665_100399089 3300005548 Bacteria 1383
15 Ga0070702_100014687 3300005615 Bacteria 3978
16 Ga0068860_100000574 3300005843 Bacteria 44216
17 Ga0081455_10167850 3300005937 Bacteria 1675
18 Ga0075365_10003731 3300006038 Bacteria 7923
19 Ga0075365_10005838 3300006038 Bacteria 6693
20 Ga0075365_10015570 3300006038 Bacteria 4603
21 Ga0075365_10028792 3300006038 Bacteria 3544
22 Ga0075365_10032814 3300006038 Bacteria 3342
23 Ga0075365_10086867 3300006038 Bacteria 2126
24 Ga0075363_100005926 3300006048 Bacteria 5507
25 Ga0075364_10009248 3300006051 Bacteria 5907
26 Ga0075364_10200384 3300006051 Bacteria 1353
27 Ga0075367_10016423 3300006178 Bacteria 4042
28 Ga0075367_10031446 3300006178 Bacteria 3048
29 Ga0105243_10034775 3300009148 Bacteria 3905
30 Ga0105248_10440115 3300009177 Bacteria 1468
31 Ga0105249_10080791 3300009553 Bacteria 3021
32 Ga0157370_10370027 3300013104 Bacteria 1320
33 Ga0157369_10661751 3300013105 Bacteria 1077
34 Ga0157372_10237815 3300013307 Bacteria 2113
35 Ga0157375_10048668 3300013308 Bacteria 4148
36 Ga0157375_10241211 3300013308 Bacteria 1967
37 Ga0182008_10112610 3300014497 Bacteria 1349
38 Ga0163161_10025355 3300017792 Bacteria 4196
39 Ga0207688_10112540 3300025901 Bacteria 1582
40 Ga0207659_10134512 3300025926 Bacteria 1912
41 Ga0207664_10025127 3300025929 Bacteria 4482
42 Ga0207669_10130499 3300025937 Bacteria 1726
43 Ga0207691_10162462 3300025940 Bacteria 1959
44 Ga0207661_10003538 3300025944 Bacteria 10849
45 Ga0207658_10032581 3300025986 Bacteria 3710
46 Ga0207658_10121931 3300025986 Bacteria 2080
47 Ga0207676_10383651 3300026095 Bacteria 1309
48 Ga0207683_10028989 3300026121 Bacteria 4791
49 Ga0209813_10035046 3300027866 Bacteria 1501
50 Ga0268264_10000208 3300028381 Bacteria 119631
51 Ga0268264_10000272 3300028381 Bacteria 89651
52 Ga0307410_10149486 3300031852 Bacteria 1737
53 Ga0307409_100004058 3300031995 Bacteria 8142
54 Ga0307409_100019837 3300031995 Bacteria 4565
55 Ga0307409_100044701 3300031995 Bacteria 3338
56 Ga0307409_100100974 3300031995 Bacteria 2393
57 Ga0307416_100017489 3300032002 Bacteria 5020
58 Ga0307416_100107110 3300032002 Bacteria 2452
59 Ga0307411_10428270 3300032005 Bacteria 1101
60 Ga0307415_100015606 3300032126 Bacteria 4504
61 Ga0395900_0116386 3300037418 Bacteria 2743
62 Ga0395898_0078203 3300037466 Bacteria 3192
63 Ga0451853_1166166 3300041512 Bacteria 4372
64 Ga0466972_0046200 3300044658 Bacteria 2109
65 Ga0466965_0040564 3300044683 Bacteria 2292
66 Ga0466961_0066150 3300044693 Bacteria 2296
67 Ga0466961_0233908 3300044693 Bacteria 1130
68 Ga0466963_0076304 3300044694 Bacteria 2263
69 Ga0466963_0192211 3300044694 Bacteria 1426
70 Ga0466963_0354030 3300044694 Bacteria 1034
71 Ga0466964_0008581 3300044706 Bacteria 3841
72 Ga0466970_0006321 3300044765 Bacteria 5915
73 Ga0466970_0024787 3300044765 Bacteria 3137
74 Ga0466960_0007991 3300044901 Bacteria 4318
75 Ga0466960_0025076 3300044901 Bacteria 2695
76 Ga0466960_0025622 3300044901 Bacteria 2670
77 Ga0466967_0022193 3300045976 Bacteria 5173
78 Ga0466967_0065853 3300045976 Bacteria 3226
79 Ga0466967_0116737 3300045976 Bacteria 2459
80 Ga0466967_0132258 3300045976 Bacteria 2317
81 Ga0496100_0028679 3300048903 Bacteria 3435
82 Ga0496100_0314248 3300048903 Bacteria 1175
83 Ga0496101_0027693 3300048904 Bacteria 3950
84 Ga0496101_0240941 3300048904 Bacteria 1407
85 Ga0496102_0028746 3300048905 Bacteria 4969
86 Ga0496102_0059172 3300048905 Bacteria 3503
87 Ga0496102_0066461 3300048905 Bacteria 3304
88 Ga0496102_0493284 3300048905 Bacteria 1146
89 Ga0496103_0039964 3300048906 Bacteria 2883
90 Ga0496103_0106938 3300048906 Bacteria 1774
91 Ga0496104_0000742 3300048907 Bacteria 27980
92 Ga0496106_0029928 3300048909 Bacteria 4059
93 Ga0496107_0003951 3300048910 Bacteria 9972
94 Ga0496107_0007029 3300048910 Bacteria 7753
95 Ga0496108_0034615 3300048911 Bacteria 4197
96 Ga0496108_0080530 3300048911 Bacteria 2759
97 Ga0496109_0012754 3300048912 Bacteria 7264
98 Ga0496109_0025309 3300048912 Bacteria 5287
99 Ga0496109_0043550 3300048912 Bacteria 4069
100 Ga0496109_0504944 3300048912 Bacteria 1141
101 Ga0496110_0031880 3300048913 Bacteria 4549
102 Ga0496110_0044899 3300048913 Bacteria 3860
103 Ga0496110_0144232 3300048913 Bacteria 2153
104 Ga0496112_0206027 3300048915 Bacteria 1925
105 Ga0496113_0121983 3300048916 Bacteria 2038
106 Ga0496113_0139011 3300048916 Bacteria 1910
107 Ga0496113_0542806 3300048916 Bacteria 933
108 Ga0496114_0017598 3300048917 Bacteria 5771
109 Ga0496114_0023841 3300048917 Bacteria 4993
110 Ga0496114_0051762 3300048917 Bacteria 3419
111 Ga0496114_0157189 3300048917 Bacteria 1974
112 Ga0496114_0173997 3300048917 Bacteria 1877
113 Ga0496115_0010689 3300048918 Bacteria 6865
114 Ga0496115_0285203 3300048918 Bacteria 1355
115 Ga0501031_0018016 3300049568 Bacteria 4593
116 Ga0501033_0063088 3300049570 Bacteria 2728
117 Ga0501036_0016882 3300049572 Bacteria 6098
118 Ga0501036_0135601 3300049572 Bacteria 2078
119 Ga0501037_0031592 3300049573 Bacteria 3910
120 Ga0501038_0035188 3300049574 Bacteria 4398
121 Ga0501039_0175487 3300049575 Bacteria 1685
122 Ga0501040_0074171 3300049576 Bacteria 2351
123 Ga0501041_0181248 3300049577 Bacteria 1318
124 Ga0501043_0134349 3300049579 Bacteria 1938
125 Ga0501046_0132474 3300049580 Bacteria 1890
126 Ga0501046_0295012 3300049580 Bacteria 1185
127 Ga0501048_0013634 3300049582 Bacteria 6032
128 Ga0501048_0234489 3300049582 Bacteria 1302
129 Ga0501067_0139564 3300049583 Bacteria 1349
130 Ga0501068_0068735 3300049584 Bacteria 2159
131 Ga0501068_0085975 3300049584 Bacteria 1936
132 Ga0501068_0176045 3300049584 Bacteria 1352
133 Ga0501069_0022252 3300049585 Bacteria 3446
134 Ga0501069_0105040 3300049585 Bacteria 1605
135 Ga0501069_0234792 3300049585 Bacteria 1068
136 Ga0501070_0015699 3300049586 Bacteria 6367
137 Ga0501070_0111687 3300049586 Bacteria 2259
138 Ga0501070_0131850 3300049586 Bacteria 2064
139 Ga0501070_0197617 3300049586 Bacteria 1652
140 Ga0501070_0383026 3300049586 Bacteria 1139
141 Ga0501071_0012724 3300049587 Bacteria 5720
142 Ga0501072_0040827 3300049588 Bacteria 3644
143 Ga0501074_0015150 3300049590 Bacteria 5607
144 Ga0501074_0043500 3300049590 Bacteria 3250
145 Ga0501074_0110225 3300049590 Bacteria 1969
146 Ga0501075_0014456 3300049591 Bacteria 5657
147 Ga0501075_0130126 3300049591 Bacteria 1917
148 Ga0501079_0077520 3300049741 Bacteria 2571
149 Ga0501080_0028879 3300049742 Bacteria 5163
150 Ga0501080_0099122 3300049742 Bacteria 2704
151 Ga0501080_0365591 3300049742 Bacteria 1301
152 Ga0501081_0092413 3300049743 Bacteria 2129
153 Ga0501081_0163143 3300049743 Bacteria 1606
154 Ga0501083_0147840 3300049744 Bacteria 1539
155 Ga0501044_0340060 3300049823 Bacteria 1422
156 nmdc:mga00v17_110524_c1 3300050491 Bacteria 1743
157 nmdc:mga00v17_160473_c1 3300050491 Bacteria 1447
158 nmdc:mga00v17_2686_c2 3300050491 Bacteria 5913
159 nmdc:mga0yw44_2443_c1 3300050492 Bacteria 7923
160 nmdc:mga0yw44_246350_c1 3300050492 Bacteria 1189
161 nmdc:mga0yw44_35896_c1 3300050492 Bacteria 2917
162 nmdc:mga0yw44_37802_c1 3300050492 Bacteria 2853
163 nmdc:mga0yw44_96601_c1 3300050492 Bacteria 1876
164 nmdc:mga06z11_32744_c1 3300050494 Bacteria 2537
165 nmdc:mga04h51_64764_c1 3300050495 Bacteria 1262
166 Ga0495595_0130215 3300053084 Bacteria 1229
167 Ga0495619_0329615 3300053085 Bacteria 1057
168 Ga0500641_0110961 3300053096 Bacteria 1181
169 Ga0500556_0000335 3300053104 Bacteria 35100
170 Ga0500573_0051583 3300053140 Bacteria 2365
171 Ga0501084_0074752 3300054114 Bacteria 2838
172 Ga0501082_0469923 3300060353 Bacteria 1099
173 Ga0466962_0093966 3300061719 Bacteria 1438
174 Ga0530510_0016147 3300061734 Bacteria 5281
175 2855388608 2855386786 Bacteria 4752232
176 Ga0501041_0252633
177 Ga0070683_100004062
178 Ga0070683_100490760
179 Ga0070682_100029007
180 Ga0070675_100060080
181 Ga0070674_100373076
182 Ga0070667_100009329
183 Ga0070667_100161907
184 Ga0070714_100001550
185 Ga0070701_10122510
186 Ga0070678_100339942
187 Ga0070685_10041679
188 Ga0070684_100210076
189 Ga0070665_100399089
190 Ga0070702_100014687
191 Ga0068860_100000574
192 Ga0081455_10167850
193 Ga0075365_10003731
194 Ga0075365_10005838
195 Ga0075365_10015570
196 Ga0075365_10028792
197 Ga0075365_10032814
198 Ga0075365_10086867
199 Ga0075363_100005926
200 Ga0075364_10009248
201 Ga0075364_10200384
202 Ga0075367_10016423
203 Ga0075367_10031446
204 Ga0105243_10034775
205 Ga0105248_10440115
206 Ga0105249_10080791
207 Ga0157370_10370027
208 Ga0157369_10661751
209 Ga0157372_10237815
210 Ga0157375_10048668
211 Ga0157375_10241211
212 Ga0182008_10112610
213 Ga0163161_10025355
214 Ga0207688_10112540
215 Ga0207659_10134512
216 Ga0207664_10025127
217 Ga0207669_10130499
218 Ga0207691_10162462
219 Ga0207661_10003538
220 Ga0207658_10032581
221 Ga0207658_10121931
222 Ga0207676_10383651
223 Ga0207683_10028989
224 Ga0209813_10035046
225 Ga0268264_10000208
226 Ga0268264_10000272
227 Ga0307410_10149486
228 Ga0307409_100004058
229 Ga0307409_100019837
230 Ga0307409_100044701
231 Ga0307409_100100974
232 Ga0307416_100017489
233 Ga0307416_100107110
234 Ga0307411_10428270
235 Ga0307415_100015606
236 Ga0395900_0116386
237 Ga0395898_0078203
238 Ga0451853_1166166
239 Ga0466972_0046200
240 Ga0466965_0040564
241 Ga0466961_0066150
242 Ga0466961_0233908
243 Ga0466963_0076304
244 Ga0466963_0192211
245 Ga0466963_0354030
246 Ga0466964_0008581
247 Ga0466970_0006321
248 Ga0466970_0024787
249 Ga0466960_0007991
250 Ga0466960_0025076
251 Ga0466960_0025622
252 Ga0466967_0022193
253 Ga0466967_0065853
254 Ga0466967_0116737
255 Ga0466967_0132258
256 Ga0496100_0028679
257 Ga0496100_0314248
258 Ga0496101_0027693
259 Ga0496101_0240941
260 Ga0496102_0028746
261 Ga0496102_0059172
262 Ga0496102_0066461
263 Ga0496102_0493284
264 Ga0496103_0039964
265 Ga0496103_0106938
266 Ga0496104_0000742
267 Ga0496106_0029928
268 Ga0496107_0003951
269 Ga0496107_0007029
270 Ga0496108_0034615
271 Ga0496108_0080530
272 Ga0496109_0012754
273 Ga0496109_0025309
274 Ga0496109_0043550
275 Ga0496109_0504944
276 Ga0496110_0031880
277 Ga0496110_0044899
278 Ga0496110_0144232
279 Ga0496112_0206027
280 Ga0496113_0121983
281 Ga0496113_0139011
282 Ga0496113_0542806
283 Ga0496114_0017598
284 Ga0496114_0023841
285 Ga0496114_0051762
286 Ga0496114_0157189
287 Ga0496114_0173997
288 Ga0496115_0010689
289 Ga0496115_0285203
290 Ga0501031_0018016
291 Ga0501033_0063088
292 Ga0501036_0016882
293 Ga0501036_0135601
294 Ga0501037_0031592
295 Ga0501038_0035188
296 Ga0501039_0175487
297 Ga0501040_0074171
298 Ga0501041_0181248
299 Ga0501043_0134349
300 Ga0501046_0132474
301 Ga0501046_0295012
302 Ga0501048_0013634
303 Ga0501048_0234489
304 Ga0501067_0139564
305 Ga0501068_0068735
306 Ga0501068_0085975
307 Ga0501068_0176045
308 Ga0501069_0022252
309 Ga0501069_0105040
310 Ga0501069_0234792
311 Ga0501070_0015699
312 Ga0501070_0111687
313 Ga0501070_0131850
314 Ga0501070_0197617
315 Ga0501070_0383026
316 Ga0501071_0012724
317 Ga0501072_0040827
318 Ga0501074_0015150
319 Ga0501074_0043500
320 Ga0501074_0110225
321 Ga0501075_0014456
322 Ga0501075_0130126
323 Ga0501079_0077520
324 Ga0501080_0028879
325 Ga0501080_0099122
326 Ga0501080_0365591
327 Ga0501081_0092413
328 Ga0501081_0163143
329 Ga0501083_0147840
330 Ga0501044_0340060
331 nmdc:mga00v17_110524_c1
332 nmdc:mga00v17_160473_c1
333 nmdc:mga00v17_2686_c2
334 nmdc:mga0yw44_2443_c1
335 nmdc:mga0yw44_246350_c1
336 nmdc:mga0yw44_35896_c1
337 nmdc:mga0yw44_37802_c1
338 nmdc:mga0yw44_96601_c1
339 nmdc:mga06z11_32744_c1
340 nmdc:mga04h51_64764_c1
341 Ga0495595_0130215
342 Ga0495619_0329615
343 Ga0500641_0110961
344 Ga0500556_0000335
345 Ga0500573_0051583
346 Ga0501084_0074752
347 Ga0501082_0469923
348 Ga0466962_0093966
349 Ga0530510_0016147
350 2855388608

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00497

SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

87

314

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gpm-assembly1.cif.gz_A crystal structure of domain 2 from tmargbp 0.8727 147 235
6gpm-assembly1.cif.gz_A crystal structure of domain 2 from tmargbp 0.802 147 235
2o1m-assembly1.cif.gz_A crystal structure of the probable amino-acid abc transporter extracellular-binding protein ytmk from bacillus subtilis. northeast structural genomics consortium target sr572 0.762 57 284
2o1m-assembly2.cif.gz_B crystal structure of the probable amino-acid abc transporter extracellular-binding protein ytmk from bacillus subtilis. northeast structural genomics consortium target sr572 0.7594 57 284
4oen-assembly1.cif.gz_A crystal structure of the second substrate binding domain of a putative amino acid abc transporter from streptococcus pneumoniae canada mdr_19a 0.7479 58 282
ID Description Score Start End Superfamily
af_P96257_184_272_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9012 148 236 3.40.190.10
af_P30860_108_189_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8809 147 233 3.40.190.10
2y7iB02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8794 147 234 3.40.190.10
af_P0AEQ3_111_205_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8776 147 236 3.40.190.10
2yjpC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8707 148 235 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A6G3WY72-F1-model_v4 Transporter substrate-binding domain-containing protein 0.9909 147 224
AF-A0A6G3WY72-F1-model_v4 Transporter substrate-binding domain-containing protein 0.9316 147 224
AF-A0A7V9NDG5-F1-model_v4 Amino acid ABC transporter substrate-binding protein 0.8792 111 292
AF-A0A7W1ISP6-F1-model_v4 Amino acid ABC transporter substrate-binding protein 0.8717 52 292 GO:0015276
GO:0016020
AF-A0A7V9NDG5-F1-model_v4 Amino acid ABC transporter substrate-binding protein 0.8704 111 292

Map