F266121

General Info

Members Datasets Scaffolds Average Seq Length
175 138 142 211

Family's Representative Sequence

Representative Sequence 3300006178|Ga0075367_10141042|Ga0075367_101410422
Length 236
Sequence VTANTRESRLRVPSGRRILEIMRLTHFGHSCVLVELNGSKILFDPGNFSHGFEGITGLDAILVTHQHPDHADPARLPELAEANPDAVLYSDPQTAEKLGGRWTGVRPGDRFSFGDVEVTGTGGEHAIIHPDLPMIDNTAFLLGDATNPARFMHPGDSLYVPEQKVDVLALPAAAPWLKISEAIDYLRAVAPRVAVPIHQAIIRDEAAGIFYGRYSEMAADGTEFRVLGEESSVEVA

Samples

Sample ID Description Type Environment
1 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
2 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
3 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
4 2582580736 Prauserella sp. Am3 Isolate Unclassified
5 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
6 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
7 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
8 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
9 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
10 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
11 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
12 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
13 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
14 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
15 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
16 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
17 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
18 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
19 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
20 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
21 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
22 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
23 2922554459 Rhodococcus sp. 66b Isolate Unclassified
24 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
25 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
26 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
27 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
28 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
30 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
31 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
36 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
37 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
50 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
51 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
78 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
83 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
84 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
85 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
86 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
87 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
88 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
89 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
90 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
91 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
94 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
99 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
102 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
108 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
109 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
137 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
138 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.14
Metatranscriptomes 0
Isolates 18.86

Biome Distribution

Category Percentage (%)
Aerial Root 0.57
Bulb 0
Endosphere 6.29
Nodule 0
Rhizoplane 17.71
Rhizosphere 51.43
Stem 0
Stem Tuber 0
Unclassified 24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10019075 3300003203 Bacteria 2804
2 Ga0070682_100069981 3300005337 Bacteria 2242
3 Ga0070682_100106113 3300005337 Bacteria 1864
4 Ga0068868_100253369 3300005338 Bacteria 1482
5 Ga0070668_100012681 3300005347 Bacteria 6274
6 Ga0070671_100000175 3300005355 Bacteria 42569
7 Ga0070674_100332345 3300005356 Bacteria 1222
8 Ga0070667_100563019 3300005367 Bacteria 1048
9 Ga0070700_100181202 3300005441 Bacteria 1466
10 Ga0070663_100000373 3300005455 Bacteria 23523
11 Ga0070662_100200459 3300005457 Bacteria 1583
12 Ga0070684_100347481 3300005535 Bacteria 1364
13 Ga0070686_100187138 3300005544 Bacteria 1475
14 Ga0070665_100004418 3300005548 Bacteria 14773
15 Ga0068855_100000003 3300005563 Bacteria 589862
16 Ga0068856_101307225 3300005614 Unclassified 740
17 Ga0068856_101518295 3300005614 Bacteria 684
18 Ga0068864_100083873 3300005618 Bacteria 2799
19 Ga0068864_100764983 3300005618 Unclassified 947
20 Ga0068863_100038227 3300005841 Bacteria 4567
21 Ga0068863_100230133 3300005841 Bacteria 1788
22 Ga0068860_100034478 3300005843 Bacteria 4855
23 Ga0081455_10078444 3300005937 Bacteria 2714
24 Ga0081539_10000507 3300005985 Bacteria 80978
25 Ga0070717_10655303 3300006028 Bacteria 953
26 Ga0075363_100081615 3300006048 Bacteria 1769
27 Ga0075363_100094015 3300006048 Bacteria 1653
28 Ga0075367_10141042 3300006178 Bacteria 1493
29 Ga0075370_10002899 3300006353 Bacteria 8050
30 Ga0105245_10104100 3300009098 Bacteria 2631
31 Ga0105245_10458527 3300009098 Bacteria 1284
32 Ga0105243_10000274 3300009148 Bacteria 57534
33 Ga0105246_10595679 3300011119 Bacteria 954
34 Ga0157369_10000643 3300013105 Bacteria 45102
35 Ga0157374_11139181 3300013296 Bacteria 801
36 Ga0157375_10278503 3300013308 Bacteria 1836
37 Ga0157375_10651465 3300013308 Bacteria 1209
38 Ga0163163_10482824 3300014325 Bacteria 1300
39 Ga0163163_11279708 3300014325 Bacteria 796
40 Ga0213875_10002739 3300021388 Bacteria 10398
41 Ga0207652_10164715 3300025921 Bacteria 1988
42 Ga0207664_10154298 3300025929 Bacteria 1953
43 Ga0207644_10000564 3300025931 Bacteria 23737
44 Ga0207706_10212901 3300025933 Bacteria 1693
45 Ga0207667_10000008 3300025949 Bacteria 625138
46 Ga0207668_10004842 3300025972 Bacteria 7923
47 Ga0207668_10126385 3300025972 Bacteria 1945
48 Ga0207658_10448124 3300025986 Bacteria 1142
49 Ga0207678_10000146 3300026067 Bacteria 58091
50 Ga0207641_10039200 3300026088 Bacteria 3962
51 Ga0207641_10190106 3300026088 Bacteria 1886
52 Ga0207676_10040016 3300026095 Bacteria 3590
53 Ga0207683_10014228 3300026121 Bacteria 6777
54 Ga0268266_10104554 3300028379 Bacteria 2500
55 Ga0268264_10008131 3300028381 Bacteria 8720
56 Ga0307515_10007121 3300028794 Bacteria 22213
57 Ga0265327_10000019 3300031251 Bacteria 427653
58 Ga0265327_10006992 3300031251 Bacteria 8849
59 Ga0307405_10720233 3300031731 Unclassified 828
60 Ga0307416_100087941 3300032002 Bacteria 2655
61 Ga0307507_10015926 3300033179 Bacteria 8800
62 Ga0307507_10059006 3300033179 Bacteria 3597
63 Ga0307510_10371586 3300033180 Bacteria 876
64 Ga0436364_0043290 3300037853 Bacteria 14356
65 Ga0395901_0421627 3300038443 Bacteria 1368
66 Ga0436365_0678783 3300039437 Bacteria 6908
67 Ga0436365_1595543 3300039437 Bacteria 1506
68 Ga0451791_0578948 3300041451 Bacteria 2827
69 Ga0451793_0297426 3300041452 Bacteria 2310
70 Ga0451797_0351859 3300041453 Bacteria 2518
71 Ga0451795_1113035 3300041456 Bacteria 2051
72 Ga0451800_0781753 3300041459 Bacteria 2423
73 Ga0451837_1758629 3300041494 Bacteria 984
74 Ga0451841_1028118 3300041498 Bacteria 3228
75 Ga0451853_0185746 3300041512 Bacteria 1097
76 Ga0451853_0344233 3300041512 Bacteria 4077
77 Ga0451853_0980654 3300041512 Bacteria 4901
78 Ga0466969_0154824 3300044656 Bacteria 1055
79 Ga0466972_0006368 3300044658 Bacteria 5929
80 Ga0466972_0033418 3300044658 Bacteria 2522
81 Ga0466965_0008963 3300044683 Bacteria 4638
82 Ga0466965_0352604 3300044683 Bacteria 806
83 Ga0466971_0333457 3300044719 Bacteria 732
84 Ga0466968_0022178 3300044735 Bacteria 2579
85 Ga0466970_0233999 3300044765 Bacteria 1027
86 Ga0466957_0282901 3300044842 Bacteria 1110
87 Ga0466960_0008583 3300044901 Bacteria 4187
88 Ga0495650_0000321 3300046471 Bacteria 85831
89 Ga0495582_0130514 3300046473 Bacteria 1420
90 Ga0495608_0130762 3300046511 Bacteria 1607
91 Ga0495665_0043986 3300046531 Bacteria 2374
92 Ga0495668_0043151 3300046616 Bacteria 2509
93 Ga0495635_0327194 3300046663 Bacteria 1025
94 Ga0495600_0252383 3300046809 Unclassified 1122
95 Ga0495604_0110995 3300047317 Bacteria 2000
96 Ga0495674_0139093 3300047319 Bacteria 2042
97 Ga0495676_0340586 3300047321 Bacteria 1004
98 Ga0495683_0000537 3300047323 Bacteria 28797
99 Ga0495602_0372648 3300048088 Bacteria 1025
100 Ga0496100_0168139 3300048903 Bacteria 1577
101 Ga0496100_0435927 3300048903 Bacteria 1003
102 Ga0496102_0001059 3300048905 Bacteria 25490
103 Ga0496102_0150457 3300048905 Bacteria 2187
104 Ga0496103_0000689 3300048906 Bacteria 25141
105 Ga0496104_0007766 3300048907 Bacteria 9503
106 Ga0496104_0025044 3300048907 Bacteria 5497
107 Ga0496105_0129713 3300048908 Bacteria 2079
108 Ga0496105_0179803 3300048908 Bacteria 1732
109 Ga0496108_0000812 3300048911 Bacteria 24256
110 Ga0496108_0071571 3300048911 Bacteria 2926
111 Ga0496108_0082636 3300048911 Bacteria 2724
112 Ga0496108_0375361 3300048911 Bacteria 1242
113 Ga0496108_0727020 3300048911 Bacteria 860
114 Ga0496109_0001448 3300048912 Bacteria 19658
115 Ga0496109_0270610 3300048912 Bacteria 1601
116 Ga0496109_0456556 3300048912 Bacteria 1207
117 Ga0496110_0026126 3300048913 Bacteria 4993
118 Ga0496110_0230265 3300048913 Bacteria 1685
119 Ga0496111_0000028 3300048914 Bacteria 58695
120 Ga0496111_0332833 3300048914 Bacteria 1124
121 Ga0496112_0166966 3300048915 Bacteria 2167
122 Ga0496113_0388446 3300048916 Bacteria 1120
123 Ga0496114_0019252 3300048917 Bacteria 5530
124 Ga0496114_0281200 3300048917 Bacteria 1467
125 Ga0496115_0155087 3300048918 Bacteria 1892
126 Ga0496116_0001533 3300048919 Bacteria 25622
127 Ga0496117_0000487 3300048920 Bacteria 65641
128 Ga0496118_0000192 3300048921 Bacteria 107736
129 Ga0496119_0000764 3300048922 Bacteria 43175
130 Ga0496122_0111095 3300048925 Bacteria 1799
131 Ga0496124_0005509 3300048927 Bacteria 14212
132 Ga0496125_0021933 3300048928 Bacteria 5939
133 Ga0496125_0047307 3300048928 Bacteria 3599
134 Ga0496126_0002434 3300048929 Bacteria 25146
135 Ga0501034_0428416 3300049571 Bacteria 1243
136 nmdc:mga03n38_25087_c1 3300050490 Bacteria 2444
137 nmdc:mga03n38_74361_c1 3300050490 Bacteria 1580
138 nmdc:mga00v17_42210_c1 3300050491 Bacteria 2742
139 nmdc:mga0yw44_279080_c1 3300050492 Bacteria 1116
140 nmdc:mga06z11_144411_c1 3300050494 Bacteria 1347
141 nmdc:mga07m45_17940_c1 3300050496 Bacteria 3809
142 nmdc:mga07m45_87733_c1 3300050496 Bacteria 1780

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031731 Ga0307405_10720233 Ga0307405_107202332 197
2 3300005563 Ga0068855_100000003 Ga0068855_100000003489 201
3 3300005614 Ga0068856_101307225 Ga0068856_1013072251 201
4 3300013105 Ga0157369_10000643 Ga0157369_1000064338 201
5 3300025949 Ga0207667_10000008 Ga0207667_10000008480 201
6 iso_pu_bacteria 2738543034 2739364523 202
7 iso_pu_bacteria 2902799365 2902804129 202
8 iso_pu_bacteria 2904765812 2904766782 202
9 iso_pu_bacteria 2904770941 2904775206 202
10 iso_pu_bacteria 2908811453 2908814476 202
11 iso_pu_bacteria 2919420072 2919420782 202
12 iso_pu_bacteria 2919432681 2919433460 202
13 iso_pu_bacteria 2915358134 2915360010 203
14 iso_pu_bacteria 2565956761 2566996180 204
15 iso_pu_bacteria 2738541308 2738888724 204
16 iso_pu_bacteria 2738543005 2739204606 204
17 iso_pu_bacteria 2738543005 2739204607 204
18 iso_pu_bacteria 2738543011 2739237891 204
19 iso_pu_bacteria 2889300758 2889303597 204
20 iso_pu_bacteria 2904535858 2904540816 204
21 iso_pu_bacteria 2919713450 2919717915 204
22 iso_pu_bacteria 2922554459 2922554907 204
23 iso_pu_bacteria 2928142448 2928145444 204
24 iso_pu_bacteria 2939743619 2939747382 204
25 iso_pu_bacteria 2974315732 2974318767 204
26 iso_pu_bacteria 2984523437 2984527041 204
27 iso_pu_bacteria 8054472261 8054478715 204
28 3300044719 Ga0466971_0333457 Ga0466971_0333457_71_688 205
29 3300021388 Ga0213875_10002739 Ga0213875_100027393 206
30 3300031251 Ga0265327_10006992 Ga0265327_100069926 206
31 3300037853 Ga0436364_0043290 Ga0436364_0043290_9328_9981 206
32 3300039437 Ga0436365_0678783 Ga0436365_0678783_2240_2893 206
33 3300039437 Ga0436365_1595543 Ga0436365_1595543_590_1243 206
34 iso_pu_bacteria 2551306166 2552113500 206
35 iso_pu_bacteria 2551306166 2552113508 206
36 iso_pu_bacteria 2891326441 2891329244 206
37 3300005355 Ga0070671_100000175 Ga0070671_10000017512 207
38 3300005367 Ga0070667_100563019 Ga0070667_1005630192 207
39 3300005548 Ga0070665_100004418 Ga0070665_10000441813 207
40 3300005618 Ga0068864_100083873 Ga0068864_1000838732 207
41 3300005841 Ga0068863_100038227 Ga0068863_1000382275 207
42 3300005841 Ga0068863_100230133 Ga0068863_1002301332 207
43 3300005843 Ga0068860_100034478 Ga0068860_1000344785 207
44 3300005937 Ga0081455_10078444 Ga0081455_100784443 207
45 3300025931 Ga0207644_10000564 Ga0207644_1000056425 207
46 3300025972 Ga0207668_10126385 Ga0207668_101263852 207
47 3300025986 Ga0207658_10448124 Ga0207658_104481242 207
48 3300026088 Ga0207641_10039200 Ga0207641_100392002 207
49 3300026088 Ga0207641_10190106 Ga0207641_101901062 207
50 3300026095 Ga0207676_10040016 Ga0207676_100400163 207
51 3300028379 Ga0268266_10104554 Ga0268266_101045542 207
52 3300028381 Ga0268264_10008131 Ga0268264_100081312 207
53 3300048905 Ga0496102_0001059 Ga0496102_0001059_19056_19679 207
54 3300048906 Ga0496103_0000689 Ga0496103_0000689_5534_6157 207
55 3300048907 Ga0496104_0007766 Ga0496104_0007766_5554_6177 207
56 3300048908 Ga0496105_0129713 Ga0496105_0129713_867_1490 207
57 3300048911 Ga0496108_0375361 Ga0496108_0375361_387_1010 207
58 3300048913 Ga0496110_0230265 Ga0496110_0230265_881_1504 207
59 3300048914 Ga0496111_0332833 Ga0496111_0332833_264_887 207
60 3300048919 Ga0496116_0001533 Ga0496116_0001533_19040_19663 207
61 3300048920 Ga0496117_0000487 Ga0496117_0000487_46052_46675 207
62 3300048921 Ga0496118_0000192 Ga0496118_0000192_19014_19637 207
63 3300048922 Ga0496119_0000764 Ga0496119_0000764_28343_28966 207
64 3300048925 Ga0496122_0111095 Ga0496122_0111095_126_749 207
65 3300048927 Ga0496124_0005509 Ga0496124_0005509_1848_2471 207
66 3300048928 Ga0496125_0047307 Ga0496125_0047307_1636_2259 207
67 3300048929 Ga0496126_0002434 Ga0496126_0002434_18990_19613 207
68 iso_pu_bacteria 2582580736 2583152151 207
69 iso_pu_bacteria 2866612099 2866616287 207
70 iso_pu_bacteria 2891326441 2891327862 207
71 iso_pu_bacteria 2899359706 2899369137 207
72 iso_pu_bacteria 2917736166 2917744032 207
73 iso_pu_bacteria 8003314358 8003315056 207
74 iso_pu_bacteria 8003314358 8003322134 207
75 3300006048 Ga0075363_100081615 Ga0075363_1000816153 208
76 3300006048 Ga0075363_100094015 Ga0075363_1000940152 208
77 3300006178 Ga0075367_10141042 Ga0075367_101410422 208
78 3300006353 Ga0075370_10002899 Ga0075370_1000289910 208
79 3300009148 Ga0105243_10000274 Ga0105243_1000027448 208
80 3300032002 Ga0307416_100087941 Ga0307416_1000879414 208
81 3300041494 Ga0451837_1758629 Ga0451837_1758629_226_870 208
82 3300041512 Ga0451853_0185746 Ga0451853_0185746_436_1080 208
83 3300041512 Ga0451853_0980654 Ga0451853_0980654_3669_4313 208
84 3300044658 Ga0466972_0033418 Ga0466972_0033418_1514_2152 208
85 3300044683 Ga0466965_0008963 Ga0466965_0008963_2364_3002 208
86 3300044842 Ga0466957_0282901 Ga0466957_0282901_311_949 208
87 3300044901 Ga0466960_0008583 Ga0466960_0008583_1521_2159 208
88 3300046531 Ga0495665_0043986 Ga0495665_0043986_47_694 208
89 3300046616 Ga0495668_0043151 Ga0495668_0043151_463_1110 208
90 3300047323 Ga0495683_0000537 Ga0495683_0000537_1613_2257 208
91 3300048911 Ga0496108_0082636 Ga0496108_0082636_217_864 208
92 3300048928 Ga0496125_0021933 Ga0496125_0021933_4469_5116 208
93 3300050490 nmdc:mga03n38_25087_c1 nmdc:mga03n38_25087_c1_1135_1782 208
94 3300050490 nmdc:mga03n38_74361_c1 nmdc:mga03n38_74361_c1_321_965 208
95 3300050491 nmdc:mga00v17_42210_c1 nmdc:mga00v17_42210_c1_1302_1946 208
96 3300050492 nmdc:mga0yw44_279080_c1 nmdc:mga0yw44_279080_c1_86_733 208
97 3300050494 nmdc:mga06z11_144411_c1 nmdc:mga06z11_144411_c1_336_983 208
98 3300050496 nmdc:mga07m45_17940_c1 nmdc:mga07m45_17940_c1_1560_2207 208
99 3300050496 nmdc:mga07m45_87733_c1 nmdc:mga07m45_87733_c1_823_1467 208
100 3300005337 Ga0070682_100069981 Ga0070682_1000699813 209
101 3300005337 Ga0070682_100106113 Ga0070682_1001061132 209
102 3300005356 Ga0070674_100332345 Ga0070674_1003323452 209
103 3300005535 Ga0070684_100347481 Ga0070684_1003474811 209
104 3300005618 Ga0068864_100764983 Ga0068864_1007649832 209
105 3300006028 Ga0070717_10655303 Ga0070717_106553031 209
106 3300009098 Ga0105245_10104100 Ga0105245_101041002 209
107 3300009098 Ga0105245_10458527 Ga0105245_104585271 209
108 3300013308 Ga0157375_10278503 Ga0157375_102785032 209
109 3300013308 Ga0157375_10651465 Ga0157375_106514652 209
110 3300014325 Ga0163163_10482824 Ga0163163_104828242 209
111 3300014325 Ga0163163_11279708 Ga0163163_112797081 209
112 3300026121 Ga0207683_10014228 Ga0207683_100142287 209
113 3300041451 Ga0451791_0578948 Ga0451791_0578948_1488_2117 209
114 3300041452 Ga0451793_0297426 Ga0451793_0297426_723_1352 209
115 3300041453 Ga0451797_0351859 Ga0451797_0351859_909_1538 209
116 3300041456 Ga0451795_1113035 Ga0451795_1113035_454_1083 209
117 3300041459 Ga0451800_0781753 Ga0451800_0781753_826_1455 209
118 3300041498 Ga0451841_1028118 Ga0451841_1028118_1105_1734 209
119 3300041512 Ga0451853_0344233 Ga0451853_0344233_3370_3999 209
120 3300046471 Ga0495650_0000321 Ga0495650_0000321_38638_39267 209
121 3300046473 Ga0495582_0130514 Ga0495582_0130514_591_1220 209
122 3300046511 Ga0495608_0130762 Ga0495608_0130762_450_1079 209
123 3300046663 Ga0495635_0327194 Ga0495635_0327194_151_780 209
124 3300046809 Ga0495600_0252383 Ga0495600_0252383_52_681 209
125 3300047317 Ga0495604_0110995 Ga0495604_0110995_221_850 209
126 3300047319 Ga0495674_0139093 Ga0495674_0139093_1017_1646 209
127 3300047321 Ga0495676_0340586 Ga0495676_0340586_63_692 209
128 3300048088 Ga0495602_0372648 Ga0495602_0372648_151_780 209
129 3300048903 Ga0496100_0168139 Ga0496100_0168139_264_893 209
130 3300048903 Ga0496100_0435927 Ga0496100_0435927_234_863 209
131 3300048905 Ga0496102_0150457 Ga0496102_0150457_1329_1958 209
132 3300048907 Ga0496104_0025044 Ga0496104_0025044_1546_2175 209
133 3300048908 Ga0496105_0179803 Ga0496105_0179803_481_1110 209
134 3300048911 Ga0496108_0000812 Ga0496108_0000812_12154_12783 209
135 3300048911 Ga0496108_0071571 Ga0496108_0071571_1348_2007 209
136 3300048911 Ga0496108_0727020 Ga0496108_0727020_83_712 209
137 3300048912 Ga0496109_0001448 Ga0496109_0001448_15639_16268 209
138 3300048912 Ga0496109_0270610 Ga0496109_0270610_211_870 209
139 3300048912 Ga0496109_0456556 Ga0496109_0456556_110_739 209
140 3300048913 Ga0496110_0026126 Ga0496110_0026126_3756_4385 209
141 3300048914 Ga0496111_0000028 Ga0496111_0000028_50084_50713 209
142 3300048915 Ga0496112_0166966 Ga0496112_0166966_268_897 209
143 3300048916 Ga0496113_0388446 Ga0496113_0388446_22_651 209
144 3300048917 Ga0496114_0019252 Ga0496114_0019252_4003_4632 209
145 3300048917 Ga0496114_0281200 Ga0496114_0281200_706_1335 209
146 3300048918 Ga0496115_0155087 Ga0496115_0155087_738_1367 209
147 iso_pu_bacteria 2523231044 2523387204 209
148 3300025921 Ga0207652_10164715 Ga0207652_101647152 210
149 3300038443 Ga0395901_0421627 Ga0395901_0421627_12_674 210
150 3300049571 Ga0501034_0428416 Ga0501034_0428416_376_1038 210
151 3300005338 Ga0068868_100253369 Ga0068868_1002533692 211
152 3300005347 Ga0070668_100012681 Ga0070668_1000126813 211
153 3300005441 Ga0070700_100181202 Ga0070700_1001812022 211
154 3300005455 Ga0070663_100000373 Ga0070663_10000037328 211
155 3300005457 Ga0070662_100200459 Ga0070662_1002004593 211
156 3300005544 Ga0070686_100187138 Ga0070686_1001871382 211
157 3300005614 Ga0068856_101518295 Ga0068856_1015182951 211
158 3300011119 Ga0105246_10595679 Ga0105246_105956792 211
159 3300013296 Ga0157374_11139181 Ga0157374_111391811 211
160 3300025929 Ga0207664_10154298 Ga0207664_101542982 211
161 3300025933 Ga0207706_10212901 Ga0207706_102129013 211
162 3300025972 Ga0207668_10004842 Ga0207668_100048423 211
163 3300026067 Ga0207678_10000146 Ga0207678_1000014640 211
164 3300028794 Ga0307515_10007121 Ga0307515_1000712112 211
165 3300033179 Ga0307507_10015926 Ga0307507_1001592612 211
166 3300033179 Ga0307507_10059006 Ga0307507_100590064 211
167 3300033180 Ga0307510_10371586 Ga0307510_103715861 211
168 3300044656 Ga0466969_0154824 Ga0466969_0154824_42_677 211
169 3300044658 Ga0466972_0006368 Ga0466972_0006368_3589_4224 211
170 3300044683 Ga0466965_0352604 Ga0466965_0352604_130_765 211
171 3300044735 Ga0466968_0022178 Ga0466968_0022178_1782_2417 211
172 3300044765 Ga0466970_0233999 Ga0466970_0233999_51_686 211
173 3300003203 JGI25406J46586_10019075 JGI25406J46586_100190752 213
174 3300005985 Ga0081539_10000507 Ga0081539_100005074 213
175 3300031251 Ga0265327_10000019 Ga0265327_1000001998 213

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13483

Lactamase_B_3

Beta-lactamase superfamily domain

23

198

0.94

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

40

199

0.81

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

24

198

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3x30-assembly1.cif.gz_A crystal structure of metallo-beta-lactamase from thermotoga maritima 0.7943 2 212
3kl7-assembly1.cif.gz_A crystal structure of putative metal-dependent hydrolase (yp_001302908.1) from parabacteroides distasonis atcc 8503 at 2.30 a resolution 0.7883 3 206
3x30-assembly1.cif.gz_A crystal structure of metallo-beta-lactamase from thermotoga maritima 0.7875 2 212
2wym-assembly1.cif.gz_B structure of a metallo-b-lactamase 0.7838 2 210
3x2y-assembly1.cif.gz_C crystal structure of metallo-beta-lactamase h8a from thermotoga maritima 0.7823 2 212
ID Description Score Start End Superfamily
3kl7A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7969 3 206 3.60.15.10
af_P9WKP3_98_359_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7932 1 211 3.60.15.10
af_P9WKP3_98_359_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7865 1 211 3.60.15.10
af_Q2FXM0_1_229_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7807 1 212 3.60.15.10
af_Q2FXM0_1_229_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7773 1 212 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A1M6SCQ0-F1-model_v4 L-ascorbate metabolism protein UlaG, beta-lactamase superfamily 0.9723 1 212
AF-A0A2S8NDD0-F1-model_v4 deleted 0.9688 131 195
AF-A0A1M6SCQ0-F1-model_v4 L-ascorbate metabolism protein UlaG, beta-lactamase superfamily 0.9677 1 212
AF-A0A0K2RAT9-F1-model_v4 UPF0173 protein PF0020 0.9488 1 211
AF-A0A154MEW9-F1-model_v4 MBL fold metallo-hydrolase 0.9417 1 212 GO:0016787

Feature Viewer

pLDDT pTM Quality
92.7 0.91 High
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Predicted Structure (AlphaFold2)

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