F265492

General Info

Members Datasets Scaffolds Average Seq Length
174 144 348 176

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2908678064|2908678236
Length 203
Sequence PYGEYAVLLAASLANDWPADRDGIEHRTIEMGMTMTFPVASDDHERTRAVIDDWLRVVDETDPDARAALLNAQMAAVTAYPRLTDHDGEGWHLHYRDSDEALPRVLAAVISVGTSLHLVTRGMNRLGRCAADPCEHVVVDVTRNGRQRYCSVRCANRAAVRRHRARGQSQQTASGMPRGWRNTGARAYVAVGTDDRRTPWPTN

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
9 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
10 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
11 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
12 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
13 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
14 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
15 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
16 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
17 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
18 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
19 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
20 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
21 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
25 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
26 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
27 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
28 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
29 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
30 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
31 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
32 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
33 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
34 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
35 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
36 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
37 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
38 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
39 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
40 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
41 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
42 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
43 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
44 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
45 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
46 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
47 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
48 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
49 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
50 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
51 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
52 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
53 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
54 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
55 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
56 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
57 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
58 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
59 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
60 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
61 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
62 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
63 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
64 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
65 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
66 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
67 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
68 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
69 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
70 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
71 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
84 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
85 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
86 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
89 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
94 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
95 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
96 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
97 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
98 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
99 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
100 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
101 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
102 2643221553 Microbacterium sp. Root553 Isolate Unclassified
103 2643221630 Microbacterium sp. Root322 Isolate Unclassified
104 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
105 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
106 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
107 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
108 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
109 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
110 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
111 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
112 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
113 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
114 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
115 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
116 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
117 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
118 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
119 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
120 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
121 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
122 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
123 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
124 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
125 2919069694 Microbacterium sp. 1154 Isolate Unclassified
126 2919395869 Microbacterium resistens 2980 Isolate Unclassified
127 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
128 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
129 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
130 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
131 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
132 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
133 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
134 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
135 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
136 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
137 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
138 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
139 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
140 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
141 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
142 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
143 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
144 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.56
Metatranscriptomes 0
Isolates 26.44

Biome Distribution

Category Percentage (%)
Aerial Root 1.15
Bulb 0
Endosphere 5.17
Nodule 0.57
Rhizoplane 6.32
Rhizosphere 56.32
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10028987 3300001979 Bacteria 1823
2 JGI25154J39366_1003748 3300002738 Bacteria 3020
3 Ga0065714_10082572 3300005288 Bacteria 2288
4 Ga0065712_10238134 3300005290 Bacteria 992
5 Ga0070670_100421677 3300005331 Bacteria 1180
6 Ga0070697_101391524 3300005536 Bacteria 626
7 Ga0081455_10000177 3300005937 Bacteria 79964
8 Ga0081455_10006010 3300005937 Bacteria 13156
9 Ga0081538_10017257 3300005981 Bacteria 5487
10 Ga0075364_10006050 3300006051 Bacteria 7083
11 Ga0075364_10031950 3300006051 Bacteria 3382
12 Ga0075364_10062376 3300006051 Bacteria 2446
13 Ga0075432_10030445 3300006058 Bacteria 1865
14 Ga0075431_100011260 3300006847 Bacteria 9008
15 Ga0075433_10463056 3300006852 Bacteria 1117
16 Ga0105244_10432001 3300009036 Bacteria 606
17 Ga0105248_11165097 3300009177 Bacteria 871
18 Ga0157370_10679551 3300013104 Bacteria 940
19 Ga0157369_10791766 3300013105 Bacteria 974
20 Ga0157372_10511080 3300013307 Bacteria 1401
21 Ga0157375_10792361 3300013308 Bacteria 1097
22 Ga0209646_1000013 3300025246 Bacteria 565830
23 Ga0209025_1042592 3300025294 Bacteria 1926
24 Ga0207655_1049458 3300025728 Bacteria 1716
25 Ga0207650_10453802 3300025925 Bacteria 1067
26 Ga0207691_10014826 3300025940 Bacteria 7428
27 Ga0207428_10134756 3300027907 Bacteria 1889
28 Ga0307408_100029800 3300031548 Bacteria 3784
29 Ga0307408_100391703 3300031548 Bacteria 1191
30 Ga0307405_10053780 3300031731 Bacteria 2510
31 Ga0307405_10124143 3300031731 Bacteria 1772
32 Ga0307413_10276781 3300031824 Bacteria 1260
33 Ga0307413_11431262 3300031824 Bacteria 609
34 Ga0307410_10008749 3300031852 Bacteria 5634
35 Ga0307406_10003261 3300031901 Bacteria 8843
36 Ga0307406_10005914 3300031901 Bacteria 6710
37 Ga0307406_10141789 3300031901 Bacteria 1702
38 Ga0307406_10236668 3300031901 Bacteria 1367
39 Ga0307407_10456434 3300031903 Bacteria 928
40 Ga0307412_10013117 3300031911 Bacteria 4849
41 Ga0307409_100124051 3300031995 Bacteria 2193
42 Ga0307409_101535512 3300031995 Bacteria 694
43 Ga0307416_100520998 3300032002 Bacteria 1257
44 Ga0307416_100552995 3300032002 Bacteria 1224
45 Ga0307414_10180265 3300032004 Bacteria 1698
46 Ga0307415_100133304 3300032126 Bacteria 1885
47 Ga0451793_0714561 3300041452 Bacteria 738
48 Ga0451797_0834001 3300041453 Bacteria 1483
49 Ga0451837_0609962 3300041494 Bacteria 1491
50 Ga0451841_0695093 3300041498 Bacteria 1338
51 Ga0451853_1534488 3300041512 Bacteria 654
52 Ga0466972_0197611 3300044658 Bacteria 942
53 Ga0466970_0000230 3300044765 Bacteria 27280
54 Ga0466970_0146067 3300044765 Bacteria 1305
55 Ga0466958_0139611 3300045836 Bacteria 1525
56 Ga0495627_000281 3300046453 Bacteria 51226
57 Ga0495580_0066109 3300046472 Bacteria 2532
58 Ga0495639_0091024 3300046475 Bacteria 1431
59 Ga0495631_0241055 3300046518 Bacteria 771
60 Ga0495586_0004439 3300046535 Bacteria 7489
61 Ga0495659_0051616 3300046664 Bacteria 1498
62 Ga0495588_0087762 3300046674 Bacteria 1627
63 Ga0495670_0025046 3300046691 Bacteria 2951
64 Ga0495581_0006205 3300047315 Bacteria 6933
65 Ga0495593_0124924 3300047673 Bacteria 1308
66 Ga0496101_0009613 3300048904 Bacteria 6361
67 Ga0496103_0023484 3300048906 Bacteria 3718
68 Ga0496106_0231158 3300048909 Bacteria 1476
69 Ga0496107_0039157 3300048910 Bacteria 3400
70 Ga0496109_1309643 3300048912 Bacteria 660
71 Ga0496110_0101252 3300048913 Bacteria 2582
72 Ga0496111_0338074 3300048914 Bacteria 1114
73 Ga0496113_0365285 3300048916 Bacteria 1158
74 Ga0496115_0397550 3300048918 Bacteria 1119
75 Ga0496117_0000726 3300048920 Bacteria 51736
76 Ga0496117_0263750 3300048920 Bacteria 932
77 Ga0496117_0380072 3300048920 Bacteria 719
78 Ga0496118_0066436 3300048921 Bacteria 2632
79 Ga0496119_0096476 3300048922 Bacteria 1668
80 Ga0496119_0173462 3300048922 Bacteria 1137
81 Ga0496122_0021356 3300048925 Bacteria 5799
82 Ga0496122_0243163 3300048925 Bacteria 1013
83 Ga0496122_0283748 3300048925 Bacteria 903
84 Ga0496122_0439269 3300048925 Bacteria 650
85 Ga0496123_0452183 3300048926 Bacteria 572
86 Ga0496124_0027903 3300048927 Bacteria 5056
87 Ga0496125_0002435 3300048928 Bacteria 24182
88 Ga0496125_0002737 3300048928 Bacteria 22311
89 Ga0496125_0026601 3300048928 Bacteria 5267
90 Ga0496125_0036522 3300048928 Bacteria 4288
91 Ga0496125_0059443 3300048928 Bacteria 3080
92 Ga0496126_0002694 3300048929 Bacteria 23472
93 Ga0496126_0222190 3300048929 Bacteria 1586
94 Ga0496126_0542729 3300048929 Bacteria 924
95 Ga0496126_0784311 3300048929 Bacteria 733
96 Ga0501032_0001077 3300049569 Bacteria 21857
97 Ga0501034_0002404 3300049571 Bacteria 22667
98 Ga0501034_0004142 3300049571 Bacteria 16233
99 Ga0501036_0019381 3300049572 Bacteria 5710
100 Ga0501037_0000259 3300049573 Bacteria 45657
101 Ga0501038_0000146 3300049574 Bacteria 60336
102 Ga0501038_0020365 3300049574 Bacteria 5964
103 Ga0501039_0000075 3300049575 Bacteria 74491
104 Ga0501040_0052350 3300049576 Bacteria 2794
105 Ga0501042_0182889 3300049578 Bacteria 1512
106 Ga0501043_0000602 3300049579 Bacteria 31761
107 Ga0501046_0001429 3300049580 Bacteria 22955
108 Ga0501047_0001655 3300049581 Bacteria 21691
109 Ga0501048_0008126 3300049582 Bacteria 7937
110 Ga0501067_0005312 3300049583 Bacteria 7158
111 Ga0501070_0001009 3300049586 Bacteria 25235
112 Ga0501073_0001430 3300049589 Bacteria 17639
113 Ga0501074_0000308 3300049590 Bacteria 28286
114 Ga0501076_0459794 3300049592 Bacteria 1048
115 Ga0501080_0003541 3300049742 Bacteria 13755
116 Ga0501083_0004290 3300049744 Bacteria 10039
117 Ga0501035_0002115 3300049822 Bacteria 19755
118 Ga0501044_0056981 3300049823 Bacteria 4010
119 Ga0501045_0182125 3300049824 Bacteria 1565
120 nmdc:mga00v17_15703_c1 3300050491 Bacteria 4254
121 nmdc:mga00v17_177063_c1 3300050491 Bacteria 1376
122 nmdc:mga00v17_694533_c1 3300050491 Bacteria 652
123 nmdc:mga06r32_449_c1 3300050510 Bacteria 34962
124 nmdc:mga0sz30_90710_c1 3300050516 Bacteria 1329
125 Ga0500573_0000455 3300053140 Bacteria 17586
126 Ga0501084_0004123 3300054114 Bacteria 11847
127 Ga0501084_0086337 3300054114 Bacteria 2635
128 Ga0501082_0497802 3300060353 Bacteria 1065
129 2908678236 2908678064 Bacteria 3482747
130 2555229717 2554235227 Bacteria 3637389
131 2643732419 2643221542 Bacteria 3563959
132 2643786477 2643221553 Bacteria 3544260
133 2644171239 2643221630 Bacteria 3601215
134 2644681176 2643221724 Bacteria 3593515
135 2655031741 2654587600 Bacteria 3911798
136 2730230391 2728369380 Bacteria 3620317
137 2738697255 2738541272 Bacteria 6848551
138 2739326845 2738543027 Bacteria 6409078
139 2747952231 2747842429 Bacteria 3914386
140 2760307222 2758568522 Bacteria 5953541
141 2760624303 2758568621 Bacteria 5967089
142 2774379081 2773857758 Bacteria 3592392
143 2774393619 2773857762 Bacteria 5971770
144 2809197039 2808606439 Bacteria 5952208
145 2812350379 2811994878 Bacteria 5992952
146 2837275820 2837268691 Bacteria 7850704
147 2852648998 2852646457 Bacteria 3408613
148 2852664245 2852663356 Bacteria 4090475
149 2857720624 2857720070 Bacteria 3189373
150 2857724784 2857723135 Bacteria 4217853
151 2891971608 2891968417 Bacteria 5821697
152 2897562813 2897561785 Bacteria 3256946
153 2904510545 2904509784 Bacteria 3520416
154 2906802899 2906799679 Bacteria 4031749
155 2919070545 2919069694 Bacteria 3622919
156 2919398104 2919395869 Bacteria 3704152
157 2928091395 2928090899 Bacteria 3158267
158 2945968615 2945968032 Bacteria 4111363
159 2946024663 2946024296 Bacteria 3508095
160 2946045057 2946041624 Bacteria 4191385
161 2946084192 2946080515 Bacteria 4310960
162 2974295045 2974294766 Bacteria 3767688
163 2974325153 2974324384 Bacteria 3750535
164 2977230099 2977228692 Bacteria 3450105
165 2977238928 2977236895 Bacteria 3569373
166 2977265319 2977264416 Bacteria 3750737
167 2984543289 2984542743 Bacteria 3569378
168 2984581859 2984580707 Bacteria 3351387
169 2995727192 2995726249 Bacteria 3470435
170 8004184660 8004182704 Bacteria 3391155
171 8004215524 8004212874 Bacteria 2861420
172 8054611956 8054609563 Bacteria 5170090
173 8055038315 8055037949 Bacteria 3337834
174 8056583855 8056579771 Bacteria 5840325
175 JGI24740J21852_10028987
176 JGI25154J39366_1003748
177 Ga0065714_10082572
178 Ga0065712_10238134
179 Ga0070670_100421677
180 Ga0070697_101391524
181 Ga0081455_10000177
182 Ga0081455_10006010
183 Ga0081538_10017257
184 Ga0075364_10006050
185 Ga0075364_10031950
186 Ga0075364_10062376
187 Ga0075432_10030445
188 Ga0075431_100011260
189 Ga0075433_10463056
190 Ga0105244_10432001
191 Ga0105248_11165097
192 Ga0157370_10679551
193 Ga0157369_10791766
194 Ga0157372_10511080
195 Ga0157375_10792361
196 Ga0209646_1000013
197 Ga0209025_1042592
198 Ga0207655_1049458
199 Ga0207650_10453802
200 Ga0207691_10014826
201 Ga0207428_10134756
202 Ga0307408_100029800
203 Ga0307408_100391703
204 Ga0307405_10053780
205 Ga0307405_10124143
206 Ga0307413_10276781
207 Ga0307413_11431262
208 Ga0307410_10008749
209 Ga0307406_10003261
210 Ga0307406_10005914
211 Ga0307406_10141789
212 Ga0307406_10236668
213 Ga0307407_10456434
214 Ga0307412_10013117
215 Ga0307409_100124051
216 Ga0307409_101535512
217 Ga0307416_100520998
218 Ga0307416_100552995
219 Ga0307414_10180265
220 Ga0307415_100133304
221 Ga0451793_0714561
222 Ga0451797_0834001
223 Ga0451837_0609962
224 Ga0451841_0695093
225 Ga0451853_1534488
226 Ga0466972_0197611
227 Ga0466970_0000230
228 Ga0466970_0146067
229 Ga0466958_0139611
230 Ga0495627_000281
231 Ga0495580_0066109
232 Ga0495639_0091024
233 Ga0495631_0241055
234 Ga0495586_0004439
235 Ga0495659_0051616
236 Ga0495588_0087762
237 Ga0495670_0025046
238 Ga0495581_0006205
239 Ga0495593_0124924
240 Ga0496101_0009613
241 Ga0496103_0023484
242 Ga0496106_0231158
243 Ga0496107_0039157
244 Ga0496109_1309643
245 Ga0496110_0101252
246 Ga0496111_0338074
247 Ga0496113_0365285
248 Ga0496115_0397550
249 Ga0496117_0000726
250 Ga0496117_0263750
251 Ga0496117_0380072
252 Ga0496118_0066436
253 Ga0496119_0096476
254 Ga0496119_0173462
255 Ga0496122_0021356
256 Ga0496122_0243163
257 Ga0496122_0283748
258 Ga0496122_0439269
259 Ga0496123_0452183
260 Ga0496124_0027903
261 Ga0496125_0002435
262 Ga0496125_0002737
263 Ga0496125_0026601
264 Ga0496125_0036522
265 Ga0496125_0059443
266 Ga0496126_0002694
267 Ga0496126_0222190
268 Ga0496126_0542729
269 Ga0496126_0784311
270 Ga0501032_0001077
271 Ga0501034_0002404
272 Ga0501034_0004142
273 Ga0501036_0019381
274 Ga0501037_0000259
275 Ga0501038_0000146
276 Ga0501038_0020365
277 Ga0501039_0000075
278 Ga0501040_0052350
279 Ga0501042_0182889
280 Ga0501043_0000602
281 Ga0501046_0001429
282 Ga0501047_0001655
283 Ga0501048_0008126
284 Ga0501067_0005312
285 Ga0501070_0001009
286 Ga0501073_0001430
287 Ga0501074_0000308
288 Ga0501076_0459794
289 Ga0501080_0003541
290 Ga0501083_0004290
291 Ga0501035_0002115
292 Ga0501044_0056981
293 Ga0501045_0182125
294 nmdc:mga00v17_15703_c1
295 nmdc:mga00v17_177063_c1
296 nmdc:mga00v17_694533_c1
297 nmdc:mga06r32_449_c1
298 nmdc:mga0sz30_90710_c1
299 Ga0500573_0000455
300 Ga0501084_0004123
301 Ga0501084_0086337
302 Ga0501082_0497802
303 2908678236
304 2555229717
305 2643732419
306 2643786477
307 2644171239
308 2644681176
309 2655031741
310 2730230391
311 2738697255
312 2739326845
313 2747952231
314 2760307222
315 2760624303
316 2774379081
317 2774393619
318 2809197039
319 2812350379
320 2837275820
321 2852648998
322 2852664245
323 2857720624
324 2857724784
325 2891971608
326 2897562813
327 2904510545
328 2906802899
329 2919070545
330 2919398104
331 2928091395
332 2945968615
333 2946024663
334 2946045057
335 2946084192
336 2974295045
337 2974325153
338 2977230099
339 2977238928
340 2977265319
341 2984543289
342 2984581859
343 2995727192
344 8004184660
345 8004215524
346 8054611956
347 8055038315
348 8056583855

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11706

zf-CGNR

CGNR zinc finger

125

167

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h0n-assembly1.cif.gz_A-2 crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 a resolution 0.6788 1 169
3h0n-assembly1.cif.gz_A-2 crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 a resolution 0.6654 1 169
7at3-assembly2.cif.gz_B structure of estd11 in complex with naproxen and methanol 0.5081 43 94
6y2c-assembly2.cif.gz_B crystal structure of the third kh domain of fubp1 0.4921 69 126
2cz3-assembly1.cif.gz_B crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from mus musculus (form-2 crystal) 0.4055 26 119
ID Description Score Start End Superfamily
3h0nA00 Mainly Alpha;Orthogonal Bundle;Jann2411-like fold;Jann2411-like domain 0.6801 3 169 1.10.3300.10
3h0nA00 Mainly Alpha;Orthogonal Bundle;Jann2411-like fold;Jann2411-like domain 0.66 3 169 1.10.3300.10
2cc3B00 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,;VirB8 protein 0.5019 42 83 3.10.450.230
af_Q8K2A1_9_168_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.4577 85 124 2.30.29.30
af_A0A1D6QMC3_544_659_1.20.930.10 Mainly Alpha;Up-down Bundle;Transcription Elongation Factor S-II; Chain A;Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.3976 15 75 1.20.930.10
ID Description Score Start End GO Terms
AF-A0A1R3WNW2-F1-model_v4 CGNR zinc finger domain-containing protein 0.9593 1 170
AF-H0QWC7-F1-model_v4 Zinc finger CGNR domain-containing protein 0.9588 1 170
AF-A0A4R6LXM3-F1-model_v4 deleted 0.9495 1 169
AF-A0A6B2T6M8-F1-model_v4 CGNR zinc finger domain-containing protein 0.9448 1 155
AF-A0A1R3WNW2-F1-model_v4 CGNR zinc finger domain-containing protein 0.9429 1 170

Map