F265339

General Info

Members Datasets Scaffolds Average Seq Length
174 123 348 330

Family's Representative Sequence

Representative Sequence 3300049588|Ga0501072_0040254|Ga0501072_0040254_1735_2724
Length 329
Sequence MRVLVTGGAGFIGSHFVRRLLEAGDEVVVLDKLTYAGNPANLEGVDAELVVGDIADQDAVAHAAAGCSAIVNFAAETHVDRSIFTPREFILTDVVGTLTLLEWARAHGARLVQVSTDEVYGDLEQGGRASEEAPLRPSSPYSASKAGGDLQVLAYVRTYGANASITRGANTYGPRQYPEKLVPLFVTNALDGLPLPVYGDGRQVREWLHAEDHCRAIELVLREGRPGEVYNIGGEDFENLEVTGRILELTGAEPSLLRHVEDRAGHDRRYAVDDAKLRALGWSPRHSFGELGLPETVTWYRENRSWWEPIKSGDYRAYYEKQYAARLRG

Samples

Sample ID Description Type Environment
1 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
29 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
56 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
68 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
71 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
72 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
76 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
77 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
85 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
86 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
87 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
88 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
89 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
93 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
94 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
95 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
114 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
117 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
118 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
119 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
120 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
121 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
122 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
123 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.43
Metatranscriptomes 0.57
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 16.09
Rhizosphere 82.76
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501072_0040254 3300049588 Bacteria 3670
2 JGI25406J46586_10027061 3300003203 Bacteria 2204
3 Ga0070680_100071930 3300005336 Bacteria 2842
4 Ga0070660_100250372 3300005339 Bacteria 1444
5 Ga0070661_100008990 3300005344 Bacteria 6914
6 Ga0070661_100232074 3300005344 Bacteria 1418
7 Ga0070709_10059839 3300005434 Bacteria 2420
8 Ga0070713_100079113 3300005436 Bacteria 2800
9 Ga0070711_100000965 3300005439 Bacteria 15234
10 Ga0070700_100242950 3300005441 Bacteria 1287
11 Ga0070681_10098905 3300005458 Bacteria 2863
12 Ga0070679_100032953 3300005530 Bacteria 5128
13 Ga0070679_100115753 3300005530 Bacteria 2666
14 Ga0070684_100016816 3300005535 Bacteria 5989
15 Ga0070672_100107884 3300005543 Bacteria 2266
16 Ga0070665_100001928 3300005548 Bacteria 23368
17 Ga0070664_100083855 3300005564 Bacteria 2750
18 Ga0081455_10297748 3300005937 Bacteria 1159
19 Ga0081538_10042207 3300005981 Bacteria 2882
20 Ga0081540_1000959 3300005983 Bacteria 26028
21 Ga0081539_10004479 3300005985 Bacteria 15387
22 Ga0081539_10068116 3300005985 Bacteria 1922
23 Ga0075430_100012326 3300006846 Bacteria 7272
24 Ga0075430_100310572 3300006846 Bacteria 1304
25 Ga0075433_10062173 3300006852 Bacteria 3270
26 Ga0105240_10104208 3300009093 Bacteria 3445
27 Ga0105247_10046268 3300009101 Bacteria 2671
28 Ga0105243_10011427 3300009148 Bacteria 6719
29 Ga0105243_10106821 3300009148 Bacteria 2334
30 Ga0105237_10000540 3300009545 Bacteria 53364
31 Ga0157374_10080999 3300013296 Bacteria 3080
32 Ga0157372_10008674 3300013307 Bacteria 10798
33 Ga0157377_10049040 3300014745 Bacteria 2372
34 Ga0206353_11642124 3300020082 Bacteria 7955
35 Ga0213876_10045363 3300021384 Bacteria 2325
36 Ga0207642_10012057 3300025899 Bacteria 3108
37 Ga0207688_10015890 3300025901 Bacteria 4081
38 Ga0207705_10055944 3300025909 Bacteria 2844
39 Ga0207705_10060070 3300025909 Bacteria 2745
40 Ga0207707_10003519 3300025912 Bacteria 13867
41 Ga0207695_10014659 3300025913 Bacteria 9270
42 Ga0207695_10105496 3300025913 Bacteria 2805
43 Ga0207671_10002417 3300025914 Bacteria 20009
44 Ga0207693_10011366 3300025915 Bacteria 7209
45 Ga0207663_10002778 3300025916 Bacteria 8436
46 Ga0207660_10006022 3300025917 Bacteria 7872
47 Ga0207660_10064957 3300025917 Bacteria 2636
48 Ga0207657_10044462 3300025919 Bacteria 3904
49 Ga0207652_10029700 3300025921 Bacteria 4573
50 Ga0207700_10023785 3300025928 Bacteria 4232
51 Ga0207709_10184330 3300025935 Bacteria 1477
52 Ga0207665_10046266 3300025939 Bacteria 2916
53 Ga0207640_10207362 3300025981 Bacteria 1490
54 Ga0207678_10154557 3300026067 Bacteria 1959
55 Ga0207708_10012150 3300026075 Bacteria 6421
56 Ga0207708_10154085 3300026075 Bacteria 1811
57 Ga0207676_10437909 3300026095 Bacteria 1230
58 Ga0207674_10071471 3300026116 Bacteria 3486
59 Ga0207675_100012241 3300026118 Bacteria 8012
60 Ga0207675_100013411 3300026118 Bacteria 7647
61 Ga0268266_10022553 3300028379 Bacteria 5363
62 Ga0268265_10066233 3300028380 Bacteria 2792
63 Ga0265326_10008615 3300028558 Bacteria 3069
64 Ga0265318_10004244 3300028577 Bacteria 6991
65 Ga0265322_10016735 3300028654 Bacteria 2114
66 Ga0265336_10000049 3300028666 Bacteria 120719
67 Ga0265338_10000046 3300028800 Bacteria 223068
68 Ga0265338_10012300 3300028800 Bacteria 9767
69 Ga0265324_10005463 3300029957 Bacteria 5486
70 Ga0265340_10000003 3300031247 Bacteria 320583
71 Ga0265327_10028527 3300031251 Bacteria 3191
72 Ga0307409_100025320 3300031995 Bacteria 4159
73 Ga0307416_100018445 3300032002 Bacteria 4915
74 Ga0307416_100046519 3300032002 Bacteria 3425
75 Ga0307416_100126924 3300032002 Bacteria 2287
76 Ga0307416_100632600 3300032002 Bacteria 1153
77 Ga0395900_0018902 3300037418 Bacteria 7028
78 Ga0395900_0107937 3300037418 Bacteria 2860
79 Ga0395900_0247779 3300037418 Bacteria 1784
80 Ga0395898_0006445 3300037466 Bacteria 12540
81 Ga0395898_0047036 3300037466 Bacteria 4236
82 Ga0395898_0135620 3300037466 Bacteria 2357
83 Ga0395905_0209968 3300037471 Bacteria 1824
84 Ga0395901_0002124 3300038443 Bacteria 20307
85 Ga0395901_0009655 3300038443 Bacteria 9787
86 Ga0395901_0263919 3300038443 Bacteria 1792
87 Ga0395901_0662094 3300038443 Bacteria 1046
88 Ga0436365_0347461 3300039437 Bacteria 4435
89 Ga0450907_002720 3300042146 Bacteria 3290
90 Ga0466966_0190210 3300044684 Bacteria 1244
91 Ga0466963_0018971 3300044694 Bacteria 4306
92 Ga0466963_0210690 3300044694 Bacteria 1360
93 Ga0466971_0059902 3300044719 Bacteria 1720
94 Ga0466960_0020341 3300044901 Bacteria 2939
95 Ga0466960_0030302 3300044901 Bacteria 2489
96 Ga0466960_0111275 3300044901 Bacteria 1423
97 Ga0466967_0005298 3300045976 Bacteria 8903
98 Ga0466967_0029693 3300045976 Bacteria 4579
99 Ga0466967_0029748 3300045976 Bacteria 4576
100 Ga0466967_0153943 3300045976 Bacteria 2152
101 Ga0466967_0173571 3300045976 Bacteria 2030
102 Ga0466967_0451498 3300045976 Bacteria 1256
103 Ga0466967_0585843 3300045976 Bacteria 1100
104 Ga0495651_0050898 3300046462 Bacteria 3195
105 Ga0495653_0000371 3300046463 Bacteria 36271
106 Ga0495664_0046912 3300046477 Bacteria 2563
107 Ga0495608_0003235 3300046511 Bacteria 11652
108 Ga0495618_0000183 3300046514 Bacteria 45029
109 Ga0495628_0014360 3300046516 Bacteria 6640
110 Ga0495630_0010760 3300046517 Bacteria 6607
111 Ga0495652_0042770 3300046529 Bacteria 3906
112 Ga0495640_0004895 3300046533 Bacteria 10659
113 Ga0495645_0000027 3300046543 Bacteria 115688
114 Ga0495645_0058197 3300046543 Bacteria 2804
115 Ga0495667_0030936 3300046559 Bacteria 3595
116 Ga0495668_0086736 3300046616 Bacteria 1717
117 Ga0495634_0007352 3300046642 Bacteria 8288
118 Ga0495588_0011232 3300046674 Bacteria 4197
119 Ga0495657_0000199 3300046675 Bacteria 53523
120 Ga0495657_0065564 3300046675 Bacteria 2388
121 Ga0495657_0221485 3300046675 Bacteria 1147
122 Ga0495646_0113925 3300046680 Bacteria 1537
123 Ga0495613_0012232 3300046689 Bacteria 6379
124 Ga0495604_0001070 3300047317 Bacteria 22685
125 Ga0495674_0000604 3300047319 Bacteria 33665
126 Ga0495676_0166722 3300047321 Bacteria 1553
127 Ga0495675_0073815 3300047444 Bacteria 2151
128 Ga0495679_036084 3300047446 Bacteria 1563
129 Ga0495684_0009503 3300047471 Bacteria 7503
130 Ga0495684_0011849 3300047471 Bacteria 6729
131 Ga0496100_0000609 3300048903 Bacteria 16930
132 Ga0496101_0306009 3300048904 Bacteria 1246
133 Ga0496102_0000091 3300048905 Bacteria 127153
134 Ga0496103_0000016 3300048906 Bacteria 266127
135 Ga0496103_0103657 3300048906 Bacteria 1802
136 Ga0496104_0000006 3300048907 Bacteria 536446
137 Ga0496104_0014260 3300048907 Bacteria 7175
138 Ga0496104_0032447 3300048907 Bacteria 4860
139 Ga0496104_0185549 3300048907 Bacteria 1991
140 Ga0496104_0203650 3300048907 Bacteria 1891
141 Ga0496105_0033304 3300048908 Bacteria 4230
142 Ga0496105_0105439 3300048908 Bacteria 2327
143 Ga0496105_0144444 3300048908 Bacteria 1957
144 Ga0496105_0177727 3300048908 Bacteria 1743
145 Ga0496108_0068768 3300048911 Bacteria 2988
146 Ga0496108_0140536 3300048911 Bacteria 2080
147 Ga0496108_0249003 3300048911 Bacteria 1546
148 Ga0496108_0265044 3300048911 Bacteria 1495
149 Ga0496109_0028894 3300048912 Bacteria 4964
150 Ga0496110_0019882 3300048913 Bacteria 5660
151 Ga0496110_0555668 3300048913 Bacteria 1043
152 Ga0496111_0000868 3300048914 Bacteria 16400
153 Ga0496112_0033464 3300048915 Bacteria 4997
154 Ga0496113_0151936 3300048916 Bacteria 1827
155 Ga0496115_0000070 3300048918 Bacteria 91981
156 Ga0496115_0000243 3300048918 Bacteria 49388
157 Ga0496115_0099477 3300048918 Bacteria 2383
158 Ga0496115_0313608 3300048918 Bacteria 1284
159 Ga0501040_0348145 3300049576 Bacteria 1061
160 Ga0501067_0158324 3300049583 Bacteria 1261
161 Ga0501070_0174787 3300049586 Bacteria 1768
162 Ga0501075_0159258 3300049591 Bacteria 1722
163 Ga0501080_0161187 3300049742 Bacteria 2071
164 Ga0501044_0235440 3300049823 Bacteria 1777
165 nmdc:mga0qj67_296675_c1 3300050509 Bacteria 1310
166 nmdc:mga0qj67_59720_c1 3300050509 Bacteria 3025
167 nmdc:mga0n895_52991_c1 3300050512 Bacteria 3984
168 nmdc:mga0rr50_40874_c1 3300050513 Bacteria 3374
169 nmdc:mga0a205_27721_c2 3300050515 Bacteria 1913
170 Ga0495601_0000572 3300053077 Bacteria 19562
171 Ga0495612_0000065 3300053078 Bacteria 47942
172 Ga0495612_0088662 3300053078 Bacteria 1307
173 Ga0501084_0230036 3300054114 Bacteria 1565
174 Ga0530510_0149272 3300061734 Bacteria 1725
175 Ga0501072_0040254
176 JGI25406J46586_10027061
177 Ga0070680_100071930
178 Ga0070660_100250372
179 Ga0070661_100008990
180 Ga0070661_100232074
181 Ga0070709_10059839
182 Ga0070713_100079113
183 Ga0070711_100000965
184 Ga0070700_100242950
185 Ga0070681_10098905
186 Ga0070679_100032953
187 Ga0070679_100115753
188 Ga0070684_100016816
189 Ga0070672_100107884
190 Ga0070665_100001928
191 Ga0070664_100083855
192 Ga0081455_10297748
193 Ga0081538_10042207
194 Ga0081540_1000959
195 Ga0081539_10004479
196 Ga0081539_10068116
197 Ga0075430_100012326
198 Ga0075430_100310572
199 Ga0075433_10062173
200 Ga0105240_10104208
201 Ga0105247_10046268
202 Ga0105243_10011427
203 Ga0105243_10106821
204 Ga0105237_10000540
205 Ga0157374_10080999
206 Ga0157372_10008674
207 Ga0157377_10049040
208 Ga0206353_11642124
209 Ga0213876_10045363
210 Ga0207642_10012057
211 Ga0207688_10015890
212 Ga0207705_10055944
213 Ga0207705_10060070
214 Ga0207707_10003519
215 Ga0207695_10014659
216 Ga0207695_10105496
217 Ga0207671_10002417
218 Ga0207693_10011366
219 Ga0207663_10002778
220 Ga0207660_10006022
221 Ga0207660_10064957
222 Ga0207657_10044462
223 Ga0207652_10029700
224 Ga0207700_10023785
225 Ga0207709_10184330
226 Ga0207665_10046266
227 Ga0207640_10207362
228 Ga0207678_10154557
229 Ga0207708_10012150
230 Ga0207708_10154085
231 Ga0207676_10437909
232 Ga0207674_10071471
233 Ga0207675_100012241
234 Ga0207675_100013411
235 Ga0268266_10022553
236 Ga0268265_10066233
237 Ga0265326_10008615
238 Ga0265318_10004244
239 Ga0265322_10016735
240 Ga0265336_10000049
241 Ga0265338_10000046
242 Ga0265338_10012300
243 Ga0265324_10005463
244 Ga0265340_10000003
245 Ga0265327_10028527
246 Ga0307409_100025320
247 Ga0307416_100018445
248 Ga0307416_100046519
249 Ga0307416_100126924
250 Ga0307416_100632600
251 Ga0395900_0018902
252 Ga0395900_0107937
253 Ga0395900_0247779
254 Ga0395898_0006445
255 Ga0395898_0047036
256 Ga0395898_0135620
257 Ga0395905_0209968
258 Ga0395901_0002124
259 Ga0395901_0009655
260 Ga0395901_0263919
261 Ga0395901_0662094
262 Ga0436365_0347461
263 Ga0450907_002720
264 Ga0466966_0190210
265 Ga0466963_0018971
266 Ga0466963_0210690
267 Ga0466971_0059902
268 Ga0466960_0020341
269 Ga0466960_0030302
270 Ga0466960_0111275
271 Ga0466967_0005298
272 Ga0466967_0029693
273 Ga0466967_0029748
274 Ga0466967_0153943
275 Ga0466967_0173571
276 Ga0466967_0451498
277 Ga0466967_0585843
278 Ga0495651_0050898
279 Ga0495653_0000371
280 Ga0495664_0046912
281 Ga0495608_0003235
282 Ga0495618_0000183
283 Ga0495628_0014360
284 Ga0495630_0010760
285 Ga0495652_0042770
286 Ga0495640_0004895
287 Ga0495645_0000027
288 Ga0495645_0058197
289 Ga0495667_0030936
290 Ga0495668_0086736
291 Ga0495634_0007352
292 Ga0495588_0011232
293 Ga0495657_0000199
294 Ga0495657_0065564
295 Ga0495657_0221485
296 Ga0495646_0113925
297 Ga0495613_0012232
298 Ga0495604_0001070
299 Ga0495674_0000604
300 Ga0495676_0166722
301 Ga0495675_0073815
302 Ga0495679_036084
303 Ga0495684_0009503
304 Ga0495684_0011849
305 Ga0496100_0000609
306 Ga0496101_0306009
307 Ga0496102_0000091
308 Ga0496103_0000016
309 Ga0496103_0103657
310 Ga0496104_0000006
311 Ga0496104_0014260
312 Ga0496104_0032447
313 Ga0496104_0185549
314 Ga0496104_0203650
315 Ga0496105_0033304
316 Ga0496105_0105439
317 Ga0496105_0144444
318 Ga0496105_0177727
319 Ga0496108_0068768
320 Ga0496108_0140536
321 Ga0496108_0249003
322 Ga0496108_0265044
323 Ga0496109_0028894
324 Ga0496110_0019882
325 Ga0496110_0555668
326 Ga0496111_0000868
327 Ga0496112_0033464
328 Ga0496113_0151936
329 Ga0496115_0000070
330 Ga0496115_0000243
331 Ga0496115_0099477
332 Ga0496115_0313608
333 Ga0501040_0348145
334 Ga0501067_0158324
335 Ga0501070_0174787
336 Ga0501075_0159258
337 Ga0501080_0161187
338 Ga0501044_0235440
339 nmdc:mga0qj67_296675_c1
340 nmdc:mga0qj67_59720_c1
341 nmdc:mga0n895_52991_c1
342 nmdc:mga0rr50_40874_c1
343 nmdc:mga0a205_27721_c2
344 Ga0495601_0000572
345 Ga0495612_0000065
346 Ga0495612_0088662
347 Ga0501084_0230036
348 Ga0530510_0149272

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

3

233

0.98

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

4

292

0.89

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

4

224

0.84

PF04321

RmlD_sub_bind

RmlD substrate binding domain

1

271

0.83

PF13460

NAD_binding_10

NAD(P)H-binding

7

160

0.78

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

3

265

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hun-assembly1.cif.gz_B crystal structure of hypothetical protein ph0414 from pyrococcus horikoshii ot3 0.9437 1 309
1r66-assembly1.cif.gz_A-2 crystal structure of desiv (dtdp-glucose 4,6-dehydratase) from streptomyces venezuelae with nad and tyd bound 0.935 1 309
8shh-assembly1.cif.gz_B crystal structure of evds6 decarboxylase in ligand free state 0.9337 2 310
8shh-assembly1.cif.gz_A crystal structure of evds6 decarboxylase in ligand free state 0.9324 2 312
1r6d-assembly1.cif.gz_A-2 crystal structure of desiv double mutant (dtdp-glucose 4,6-dehydratase) from streptomyces venezuelae with nad and dau bound 0.9291 1 309
ID Description Score Start End Superfamily
af_P72050_1_314_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9069 1 302 3.40.50.720
1r6dA02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9039 170 309 3.90.25.10
af_Q54WS6_11_352_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9015 3 288 3.40.50.720
af_Q2G289_4_319_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8979 2 304 3.40.50.720
2hunB02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.8953 170 309 3.90.25.10
ID Description Score Start End GO Terms
AF-A0A1V5IPG3-F1-model_v4 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.9678 164 325 GO:0008460
AF-A0A7J4FBQ7-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9622 164 311
AF-A0A5D3ABM0-F1-model_v4 NAD(P)-binding domain-containing protein 0.9616 151 305
AF-A0A3D4EVE5-F1-model_v4 dTDP-glucose 4,6-dehydratase 0.9602 148 298
AF-A0A2V6X7Z8-F1-model_v4 dTDP-glucose 4,6-dehydratase 0.9598 172 322

Map