F265199

General Info

Members Datasets Scaffolds Average Seq Length
174 132 348 259

Family's Representative Sequence

Representative Sequence 3300047318|Ga0495636_0074978|Ga0495636_0074978_33_911
Length 292
Sequence MHGVVDIHGHARSVSHCARDCRREGAYHAHMCLIAAAWQQHPRYALALIANRDELHARPASAAAPDPEQPDVYGGRDLEAGGSWLQVSTRGRLAAVTNVRVGRNPETAPRSRGALVRDFARGDDDAASYVARLAPIAADHGRYNLLCWDGDALMFATNHPEAGSRAVSPGVHAMSNGAFDAPWPKSGHATRALRAWLDSPVSSHEVDAAALEPLFVALADTLPAPDAALPDTGVGLEMERWLSPPFVRGERYGTRCSTIVLVGADAIVFAERRFGPDGVPQGDSFAALPRIG

Samples

Sample ID Description Type Environment
1 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
8 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
26 3300012482 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510 Metagenome Rhizosphere
27 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
28 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
29 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
30 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
32 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
51 3300028023 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 Metagenome Rhizosphere
52 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
62 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
66 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
67 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
68 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
69 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
70 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
71 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
72 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
73 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
74 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
75 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
76 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
77 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
78 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
79 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
80 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
81 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
82 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
85 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
86 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
87 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
88 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
104 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
105 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
106 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
107 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
108 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
109 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
110 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
113 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
114 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
117 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
120 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
121 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
124 2643221559 Lysobacter sp. Root559 Isolate Unclassified
125 2643221573 Lysobacter sp. Root604 Isolate Unclassified
126 2643221586 Lysobacter sp. Root667 Isolate Unclassified
127 2643221612 Lysobacter sp. Root76 Isolate Unclassified
128 2643221695 Lysobacter sp. Root494 Isolate Unclassified
129 2643221720 Lysobacter sp. Root916 Isolate Unclassified
130 2643221727 Lysobacter sp. Root96 Isolate Unclassified
131 2643221728 Lysobacter sp. Root983 Isolate Unclassified
132 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.68
Metatranscriptomes 0.57
Isolates 5.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.52
Nodule 0
Rhizoplane 3.45
Rhizosphere 74.71
Stem 0
Stem Tuber 0
Unclassified 3.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495636_0074978 3300047318 Bacteria 1449
2 JGI24738J21930_10000593 3300002075 Bacteria 10388
3 JGI25162J39368_1008571 3300002737 Bacteria 1453
4 JGI25151J46595_10024781 3300003187 Bacteria 2450
5 rootH2_10028254 3300003320 Bacteria 2452
6 Ga0055524_1026548 3300003775 Bacteria 1786
7 Ga0055536_1002671 3300003781 Bacteria 9895
8 Ga0055536_1039107 3300003781 Bacteria 1143
9 Ga0055530_10002131 3300003791 Bacteria 13146
10 Ga0055531_10007014 3300003794 Bacteria 6246
11 Ga0055531_10018108 3300003794 Bacteria 2929
12 Ga0055531_10047556 3300003794 Bacteria 1166
13 Ga0070680_100254710 3300005336 Bacteria 1484
14 Ga0070682_100184290 3300005337 Unclassified 1461
15 Ga0068868_100047858 3300005338 Bacteria 3353
16 Ga0070687_100023785 3300005343 Bacteria 2915
17 Ga0070669_100009964 3300005353 Bacteria 6759
18 Ga0070705_100060404 3300005440 Bacteria 2248
19 Ga0070700_100014535 3300005441 Bacteria 4445
20 Ga0070694_100040986 3300005444 Bacteria 3087
21 Ga0070694_100179631 3300005444 Bacteria 1564
22 Ga0068861_100416480 3300005719 Bacteria 1196
23 Ga0068861_100474498 3300005719 Bacteria 1126
24 Ga0068862_100252502 3300005844 Bacteria 1608
25 Ga0075428_100000322 3300006844 Bacteria 47435
26 Ga0075430_100155845 3300006846 Bacteria 1902
27 Ga0075429_100016260 3300006880 Bacteria 6447
28 Ga0099794_10166278 3300007265 Bacteria 1123
29 Ga0111539_10094378 3300009094 Bacteria 3514
30 Ga0111539_10254036 3300009094 Bacteria 2047
31 Ga0105032_100608 3300009979 Bacteria 3500
32 Ga0157318_1000096 3300012482 Bacteria 2783
33 Ga0157380_10069916 3300014326 Bacteria 2835
34 Ga0157380_10179381 3300014326 Unclassified 1859
35 Ga0182005_1015602 3300015265 Bacteria 2117
36 Ga0209675_1002457 3300025291 Bacteria 9513
37 Ga0209676_1000700 3300025292 Bacteria 46962
38 Ga0209676_1003080 3300025292 Bacteria 10744
39 Ga0209676_1003909 3300025292 Bacteria 8667
40 Ga0209676_1005421 3300025292 Bacteria 6673
41 Ga0209676_1006961 3300025292 Bacteria 5445
42 Ga0209025_1002408 3300025294 Bacteria 19932
43 Ga0209025_1074523 3300025294 Bacteria 1185
44 Ga0209564_1003104 3300025295 Bacteria 11746
45 Ga0209050_1007186 3300025298 Bacteria 6335
46 Ga0209256_1000857 3300025299 Bacteria 37953
47 Ga0209256_1002748 3300025299 Bacteria 13597
48 Ga0209256_1005729 3300025299 Bacteria 6968
49 Ga0209257_1000478 3300025304 Bacteria 72767
50 Ga0209257_1000570 3300025304 Bacteria 62283
51 Ga0209257_1000615 3300025304 Bacteria 58010
52 Ga0209257_1000890 3300025304 Bacteria 41952
53 Ga0209257_1008984 3300025304 Bacteria 5488
54 Ga0207660_10166663 3300025917 Bacteria 1703
55 Ga0207662_10102636 3300025918 Bacteria 1774
56 Ga0207681_10002792 3300025923 Bacteria 11054
57 Ga0207644_10177379 3300025931 Bacteria 1668
58 Ga0207709_10394810 3300025935 Bacteria 1056
59 Ga0207704_10094946 3300025938 Bacteria 1970
60 Ga0207711_10346120 3300025941 Bacteria 1376
61 Ga0207689_10044027 3300025942 Bacteria 3689
62 Ga0207640_10178766 3300025981 Bacteria 1589
63 Ga0207708_10028870 3300026075 Bacteria 4200
64 Ga0207648_10234649 3300026089 Bacteria 1632
65 Ga0207676_10029019 3300026095 Bacteria 4138
66 Ga0207675_100001675 3300026118 Bacteria 22182
67 Ga0209971_1027739 3300027682 Bacteria 1354
68 Ga0265354_1005042 3300028016 Bacteria 1355
69 Ga0265357_1002615 3300028023 Bacteria 1490
70 Ga0265760_10000325 3300031090 Bacteria 13318
71 Ga0307408_100217392 3300031548 Bacteria 1557
72 Ga0307405_10093772 3300031731 Bacteria 1995
73 Ga0307405_10161789 3300031731 Bacteria 1586
74 Ga0307413_10009102 3300031824 Bacteria 4733
75 Ga0307413_10053903 3300031824 Bacteria 2437
76 Ga0307413_10101231 3300031824 Bacteria 1904
77 Ga0307410_10207306 3300031852 Unclassified 1500
78 Ga0307406_10002541 3300031901 Bacteria 9952
79 Ga0307406_10060267 3300031901 Bacteria 2446
80 Ga0307406_10141201 3300031901 Bacteria 1705
81 Ga0307406_10154127 3300031901 Unclassified 1643
82 Ga0307407_10087951 3300031903 Bacteria 1897
83 Ga0307412_10330514 3300031911 Bacteria 1216
84 Ga0307416_100000441 3300032002 Bacteria 21217
85 Ga0307414_10012834 3300032004 Bacteria 4971
86 Ga0307414_10098316 3300032004 Bacteria 2195
87 Ga0307414_10465627 3300032004 Unclassified 1112
88 Ga0307411_10002207 3300032005 Bacteria 8475
89 Ga0307411_10029127 3300032005 Bacteria 3367
90 Ga0307411_10084444 3300032005 Bacteria 2196
91 Ga0307415_100051645 3300032126 Bacteria 2791
92 Ga0307415_100289557 3300032126 Bacteria 1351
93 Ga0373937_0159059 3300036401 Bacteria 2118
94 Ga0439436_0035046 3300041404 Bacteria 1450
95 Ga0439439_0007535 3300041406 Bacteria 2549
96 Ga0451837_0605551 3300041494 Bacteria 1478
97 Ga0439433_0007483 3300041999 Bacteria 2360
98 Ga0439432_021645 3300042006 Bacteria 2129
99 Ga0439449_0014995 3300042007 Bacteria 2912
100 Ga0439449_0164229 3300042007 Bacteria 829
101 Ga0439462_0014141 3300042015 Bacteria 2049
102 Ga0439462_0029816 3300042015 Bacteria 1443
103 Ga0450923_011262 3300042125 Bacteria 1605
104 Ga0439446_0045214 3300042156 Bacteria 1305
105 Ga0439435_0000066 3300042436 Bacteria 12632
106 Ga0450918_016057 3300042531 Bacteria 1300
107 Ga0466982_0000109 3300044672 Bacteria 20352
108 Ga0495580_0145767 3300046472 Bacteria 1641
109 Ga0495639_0125448 3300046475 Bacteria 1227
110 Ga0495607_0107264 3300046501 Bacteria 1486
111 Ga0495621_0121603 3300046539 Bacteria 1009
112 Ga0495656_0008651 3300046615 Bacteria 3641
113 Ga0495647_0009420 3300046681 Bacteria 3309
114 Ga0495658_0013470 3300046683 Bacteria 4162
115 Ga0495589_0173383 3300046794 Bacteria 1025
116 Ga0495636_0015646 3300047318 Bacteria 3024
117 Ga0495675_0152714 3300047444 Unclassified 1426
118 Ga0495685_031691 3300047447 Bacteria 1816
119 Ga0496101_0162058 3300048904 Bacteria 1716
120 Ga0496102_0088236 3300048905 Bacteria 2867
121 Ga0496108_0067330 3300048911 Bacteria 3020
122 Ga0496110_0103195 3300048913 Bacteria 2557
123 Ga0496111_0045519 3300048914 Bacteria 3157
124 Ga0496112_0237795 3300048915 Bacteria 1775
125 Ga0501031_0065967 3300049568 Bacteria 2358
126 Ga0501033_0003778 3300049570 Bacteria 12306
127 Ga0501036_0129865 3300049572 Bacteria 2127
128 Ga0501036_0355775 3300049572 Bacteria 1223
129 Ga0501038_0058852 3300049574 Bacteria 3293
130 Ga0501039_0053887 3300049575 Bacteria 3113
131 Ga0501040_0045318 3300049576 Bacteria 2999
132 Ga0501041_0008264 3300049577 Bacteria 6123
133 Ga0501042_0076377 3300049578 Bacteria 2398
134 Ga0501043_0003536 3300049579 Bacteria 12842
135 Ga0501043_0179489 3300049579 Bacteria 1650
136 Ga0501048_0065172 3300049582 Bacteria 2576
137 Ga0501048_0277931 3300049582 Bacteria 1191
138 Ga0501067_0021343 3300049583 Bacteria 3583
139 Ga0501068_0118727 3300049584 Bacteria 1648
140 Ga0501071_0023527 3300049587 Bacteria 4303
141 Ga0501071_0079901 3300049587 Bacteria 2391
142 Ga0501071_0302179 3300049587 Bacteria 1213
143 Ga0501072_0027777 3300049588 Bacteria 4415
144 Ga0501072_0064109 3300049588 Bacteria 2898
145 Ga0501073_0016770 3300049589 Bacteria 5308
146 Ga0501074_0070901 3300049590 Bacteria 2505
147 Ga0501076_0004695 3300049592 Bacteria 9744
148 Ga0501076_0170072 3300049592 Bacteria 1776
149 Ga0501079_0085575 3300049741 Bacteria 2440
150 Ga0501080_0009936 3300049742 Bacteria 8694
151 Ga0501080_0262648 3300049742 Bacteria 1573
152 Ga0501081_0391103 3300049743 Bacteria 1028
153 Ga0501083_0116535 3300049744 Bacteria 1754
154 Ga0501083_0163816 3300049744 Bacteria 1454
155 Ga0501035_0014073 3300049822 Bacteria 7381
156 Ga0501044_0345717 3300049823 Bacteria 1408
157 Ga0501045_0100286 3300049824 Bacteria 2143
158 nmdc:mga09592_14662_c1 3300050508 Bacteria 6395
159 nmdc:mga0qj67_46900_c1 3300050509 Bacteria 3412
160 nmdc:mga08y16_10107_c1 3300050511 Bacteria 9906
161 nmdc:mga08y16_123894_c1 3300050511 Bacteria 2689
162 nmdc:mga0rr50_521344_c1 3300050513 Bacteria 1011
163 Ga0495619_0201144 3300053085 Bacteria 1379
164 Ga0501082_0151690 3300060353 Bacteria 2013
165 2572255964 2571042365 Bacteria 3289345
166 2643815220 2643221559 Bacteria 4424915
167 2643879258 2643221573 Bacteria 4784121
168 2643939898 2643221586 Bacteria 4446529
169 2644076956 2643221612 Bacteria 4361984
170 2644530228 2643221695 Bacteria 3441323
171 2644660558 2643221720 Bacteria 4694283
172 2644695270 2643221727 Bacteria 4415595
173 2644697917 2643221728 Bacteria 4797149
174 8003014512 8003014200 Bacteria 4059994
175 Ga0495636_0074978
176 JGI24738J21930_10000593
177 JGI25162J39368_1008571
178 JGI25151J46595_10024781
179 rootH2_10028254
180 Ga0055524_1026548
181 Ga0055536_1002671
182 Ga0055536_1039107
183 Ga0055530_10002131
184 Ga0055531_10007014
185 Ga0055531_10018108
186 Ga0055531_10047556
187 Ga0070680_100254710
188 Ga0070682_100184290
189 Ga0068868_100047858
190 Ga0070687_100023785
191 Ga0070669_100009964
192 Ga0070705_100060404
193 Ga0070700_100014535
194 Ga0070694_100040986
195 Ga0070694_100179631
196 Ga0068861_100416480
197 Ga0068861_100474498
198 Ga0068862_100252502
199 Ga0075428_100000322
200 Ga0075430_100155845
201 Ga0075429_100016260
202 Ga0099794_10166278
203 Ga0111539_10094378
204 Ga0111539_10254036
205 Ga0105032_100608
206 Ga0157318_1000096
207 Ga0157380_10069916
208 Ga0157380_10179381
209 Ga0182005_1015602
210 Ga0209675_1002457
211 Ga0209676_1000700
212 Ga0209676_1003080
213 Ga0209676_1003909
214 Ga0209676_1005421
215 Ga0209676_1006961
216 Ga0209025_1002408
217 Ga0209025_1074523
218 Ga0209564_1003104
219 Ga0209050_1007186
220 Ga0209256_1000857
221 Ga0209256_1002748
222 Ga0209256_1005729
223 Ga0209257_1000478
224 Ga0209257_1000570
225 Ga0209257_1000615
226 Ga0209257_1000890
227 Ga0209257_1008984
228 Ga0207660_10166663
229 Ga0207662_10102636
230 Ga0207681_10002792
231 Ga0207644_10177379
232 Ga0207709_10394810
233 Ga0207704_10094946
234 Ga0207711_10346120
235 Ga0207689_10044027
236 Ga0207640_10178766
237 Ga0207708_10028870
238 Ga0207648_10234649
239 Ga0207676_10029019
240 Ga0207675_100001675
241 Ga0209971_1027739
242 Ga0265354_1005042
243 Ga0265357_1002615
244 Ga0265760_10000325
245 Ga0307408_100217392
246 Ga0307405_10093772
247 Ga0307405_10161789
248 Ga0307413_10009102
249 Ga0307413_10053903
250 Ga0307413_10101231
251 Ga0307410_10207306
252 Ga0307406_10002541
253 Ga0307406_10060267
254 Ga0307406_10141201
255 Ga0307406_10154127
256 Ga0307407_10087951
257 Ga0307412_10330514
258 Ga0307416_100000441
259 Ga0307414_10012834
260 Ga0307414_10098316
261 Ga0307414_10465627
262 Ga0307411_10002207
263 Ga0307411_10029127
264 Ga0307411_10084444
265 Ga0307415_100051645
266 Ga0307415_100289557
267 Ga0373937_0159059
268 Ga0439436_0035046
269 Ga0439439_0007535
270 Ga0451837_0605551
271 Ga0439433_0007483
272 Ga0439432_021645
273 Ga0439449_0014995
274 Ga0439449_0164229
275 Ga0439462_0014141
276 Ga0439462_0029816
277 Ga0450923_011262
278 Ga0439446_0045214
279 Ga0439435_0000066
280 Ga0450918_016057
281 Ga0466982_0000109
282 Ga0495580_0145767
283 Ga0495639_0125448
284 Ga0495607_0107264
285 Ga0495621_0121603
286 Ga0495656_0008651
287 Ga0495647_0009420
288 Ga0495658_0013470
289 Ga0495589_0173383
290 Ga0495636_0015646
291 Ga0495675_0152714
292 Ga0495685_031691
293 Ga0496101_0162058
294 Ga0496102_0088236
295 Ga0496108_0067330
296 Ga0496110_0103195
297 Ga0496111_0045519
298 Ga0496112_0237795
299 Ga0501031_0065967
300 Ga0501033_0003778
301 Ga0501036_0129865
302 Ga0501036_0355775
303 Ga0501038_0058852
304 Ga0501039_0053887
305 Ga0501040_0045318
306 Ga0501041_0008264
307 Ga0501042_0076377
308 Ga0501043_0003536
309 Ga0501043_0179489
310 Ga0501048_0065172
311 Ga0501048_0277931
312 Ga0501067_0021343
313 Ga0501068_0118727
314 Ga0501071_0023527
315 Ga0501071_0079901
316 Ga0501071_0302179
317 Ga0501072_0027777
318 Ga0501072_0064109
319 Ga0501073_0016770
320 Ga0501074_0070901
321 Ga0501076_0004695
322 Ga0501076_0170072
323 Ga0501079_0085575
324 Ga0501080_0009936
325 Ga0501080_0262648
326 Ga0501081_0391103
327 Ga0501083_0116535
328 Ga0501083_0163816
329 Ga0501035_0014073
330 Ga0501044_0345717
331 Ga0501045_0100286
332 nmdc:mga09592_14662_c1
333 nmdc:mga0qj67_46900_c1
334 nmdc:mga08y16_10107_c1
335 nmdc:mga08y16_123894_c1
336 nmdc:mga0rr50_521344_c1
337 Ga0495619_0201144
338 Ga0501082_0151690
339 2572255964
340 2643815220
341 2643879258
342 2643939898
343 2644076956
344 2644530228
345 2644660558
346 2644695270
347 2644697917
348 8003014512

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05742

TANGO2

Transport and Golgi organisation 2

31

276

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4e19-assembly2.cif.gz_B crystal structure of rnase h1 from halophilic archaeon halobacterium salinarum nrc-1 0.7346 230 253
7sny-assembly1.cif.gz_A 2.10a resolution structure of nanobit complementation reporter large subunit lgbit 0.6995 218 253
2x1e-assembly1.cif.gz_A the crystal structure of mature acyl coenzyme a:isopenicillin n acyltransferase from penicillium chrysogenum in complex 6- aminopenicillanic acid 0.6704 2 253
2x1e-assembly3.cif.gz_C the crystal structure of mature acyl coenzyme a:isopenicillin n acyltransferase from penicillium chrysogenum in complex 6- aminopenicillanic acid 0.6584 2 253
2x1c-assembly2.cif.gz_B the crystal structure of precursor acyl coenzyme a:isopenicillin n acyltransferase from penicillium chrysogenum 0.6489 1 253
ID Description Score Start End Superfamily
af_A0A1D6JCY0_1_258_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.9347 1 238 3.60.60.10
af_A0A2R8RVG3_1_257_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.9228 1 237 3.60.60.10
af_A0A1D6JCY0_1_258_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.8778 1 238 3.60.60.10
af_C6T8N2_1_250_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.8729 1 253 3.60.60.10
af_C6T8N2_1_250_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.8662 1 253 3.60.60.10
ID Description Score Start End GO Terms
AF-A0A1T5AQE3-F1-model_v4 Uncharacterized conserved protein, contains NRDE domain 0.9907 1 253
AF-A0A0R0D0B7-F1-model_v4 NRDE family protein 0.9907 1 252
AF-A0A1M3QMZ2-F1-model_v4 NRDE family protein 0.9891 1 253
AF-M5CUU2-F1-model_v4 deleted 0.9883 1 252
AF-A0A1T5AQE3-F1-model_v4 Uncharacterized conserved protein, contains NRDE domain 0.9868 1 253

Map