F264081

General Info

Members Datasets Scaffolds Average Seq Length
174 125 348 305

Family's Representative Sequence

Representative Sequence 3300005458|Ga0070681_10106388|Ga0070681_101063882
Length 343
Sequence VIATDATGTRPLVALVGPTATGKTALAVALAERLRDITRCAAVAADSRQIYRLMDIATAKPTPAERAALPHALIDVVWPDESYTLAQYQADAQAAIAATTSDGALPLLVGGTGLYIRAVVDGLAIPTVAPQPALRAELEAEVATQGATALHQRLATLDPTAAAQIAPTNVRRVIRALEVCLVTGRPFSEQQGARPTPYRTLLLGLNMDRAALYTRADTRIDGMLAAGVVEETAGLMARGYDWRLPSMSSLGYREIGAYLRGESSLAEAVERFKLATHRYIRRQLTWFRSDTRITWLDAAQPLDTLAGQAETLVRTWVVAGSPLPQTSPPIPLEGGPEPPNVVR

Samples

Sample ID Description Type Environment
1 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
54 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
55 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
59 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
60 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
61 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
62 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
63 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
74 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
75 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
80 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
81 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
82 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
83 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
91 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
107 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
108 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
109 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
110 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
116 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
117 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
118 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
119 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
122 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
123 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
124 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
125 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.28
Metatranscriptomes 1.15
Isolates 0.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.9
Nodule 0
Rhizoplane 1.72
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 1.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070681_10106388 3300005458 Bacteria 2747
2 rootH1_10074516 3300003323 Bacteria 3054
3 Ga0070683_100003798 3300005329 Bacteria 12335
4 Ga0070668_100005178 3300005347 Bacteria 9671
5 Ga0070714_100023346 3300005435 Bacteria 5079
6 Ga0070711_100246696 3300005439 Bacteria 1399
7 Ga0070708_100004340 3300005445 Bacteria 11139
8 Ga0070708_100004528 3300005445 Bacteria 10944
9 Ga0070706_100002371 3300005467 Bacteria 19029
10 Ga0070706_100270066 3300005467 Bacteria 1587
11 Ga0070706_100283530 3300005467 Bacteria 1546
12 Ga0070707_100176917 3300005468 Bacteria 2080
13 Ga0070679_100007673 3300005530 Bacteria 10099
14 Ga0070679_100028483 3300005530 Bacteria 5507
15 Ga0070684_100001199 3300005535 Bacteria 18632
16 Ga0070697_100037181 3300005536 Bacteria 3933
17 Ga0070686_100323862 3300005544 Bacteria 1150
18 Ga0068855_100253382 3300005563 Bacteria 1963
19 Ga0070664_100065458 3300005564 Bacteria 3101
20 Ga0068857_100001059 3300005577 Bacteria 21298
21 Ga0068857_100006949 3300005577 Bacteria 9739
22 Ga0068856_100001108 3300005614 Bacteria 28441
23 Ga0068859_100260001 3300005617 Bacteria 1827
24 Ga0068864_100462393 3300005618 Bacteria 1215
25 Ga0070717_10016234 3300006028 Bacteria 5769
26 Ga0075365_10019918 3300006038 Bacteria 4151
27 Ga0075368_10008527 3300006042 Bacteria 3654
28 Ga0075364_10004297 3300006051 Bacteria 8181
29 Ga0075364_10092618 3300006051 Bacteria 2006
30 Ga0075367_10028102 3300006178 Bacteria 3206
31 Ga0075367_10031361 3300006178 Bacteria 3052
32 Ga0075366_10009903 3300006195 Bacteria 5333
33 Ga0075433_10006541 3300006852 Bacteria 9219
34 Ga0097620_100259976 3300006931 Bacteria 1827
35 Ga0075435_100089228 3300007076 Bacteria 2542
36 Ga0105240_10000170 3300009093 Bacteria 133127
37 Ga0105240_10031086 3300009093 Bacteria 6928
38 Ga0105240_10082331 3300009093 Bacteria 3953
39 Ga0105240_10259170 3300009093 Bacteria 2007
40 Ga0105239_10491724 3300010375 Bacteria 1394
41 Ga0157369_10046301 3300013105 Bacteria 4727
42 Ga0157372_10020664 3300013307 Bacteria 7105
43 Ga0157380_10253760 3300014326 Unclassified 1593
44 Ga0206356_11676890 3300020070 Bacteria 3340
45 Ga0213874_10002000 3300021377 Bacteria 4299
46 Ga0213874_10053543 3300021377 Bacteria 1245
47 Ga0213876_10033577 3300021384 Bacteria 2705
48 Ga0224712_10001179 3300022467 Bacteria 5857
49 Ga0207684_10002386 3300025910 Bacteria 19013
50 Ga0207707_10037935 3300025912 Bacteria 4210
51 Ga0207707_10210498 3300025912 Bacteria 1694
52 Ga0207695_10000208 3300025913 Bacteria 158591
53 Ga0207695_10189725 3300025913 Bacteria 1973
54 Ga0207695_10223801 3300025913 Bacteria 1788
55 Ga0207671_10316982 3300025914 Bacteria 1234
56 Ga0207652_10010479 3300025921 Bacteria 7460
57 Ga0207646_10099155 3300025922 Bacteria 2611
58 Ga0207650_10289839 3300025925 Unclassified 1334
59 Ga0207700_10009920 3300025928 Bacteria 5977
60 Ga0207661_10000933 3300025944 Bacteria 19214
61 Ga0207679_10018408 3300025945 Bacteria 4679
62 Ga0207668_10001127 3300025972 Bacteria 15925
63 Ga0207702_10006600 3300026078 Bacteria 9976
64 Ga0207641_10212709 3300026088 Bacteria 1789
65 Ga0207674_10000172 3300026116 Bacteria 78347
66 Ga0207674_10014239 3300026116 Bacteria 8789
67 Ga0268265_10060211 3300028380 Bacteria 2909
68 Ga0265323_10010019 3300028653 Bacteria 3851
69 Ga0265322_10008888 3300028654 Bacteria 2922
70 Ga0307515_10000241 3300028794 Bacteria 135591
71 Ga0265316_10068146 3300031344 Bacteria 2750
72 Ga0265316_10171696 3300031344 Bacteria 1617
73 Ga0307513_10014335 3300031456 Bacteria 9681
74 Ga0316575_10017608 3300031665 Bacteria 2714
75 Ga0316579_10003190 3300031691 Bacteria 6348
76 Ga0316576_10009258 3300031727 Bacteria 6348
77 Ga0316576_10053450 3300031727 Bacteria 2943
78 Ga0316576_10089832 3300031727 Bacteria 2288
79 Ga0316578_10201825 3300031728 Bacteria 1197
80 Ga0316577_10004392 3300031733 Bacteria 7269
81 Ga0316577_10055720 3300031733 Bacteria 2206
82 Ga0316577_10109408 3300031733 Bacteria 1550
83 Ga0307410_10000057 3300031852 Bacteria 39921
84 Ga0307406_10000265 3300031901 Bacteria 31531
85 Ga0307407_10004059 3300031903 Bacteria 6145
86 Ga0307409_100000171 3300031995 Bacteria 25353
87 Ga0307416_100000127 3300032002 Bacteria 45966
88 Ga0307414_10163696 3300032004 Bacteria 1770
89 Ga0307415_100000741 3300032126 Bacteria 14697
90 Ga0316585_10068849 3300032137 Bacteria 1147
91 Ga0373956_0003031 3300035119 Bacteria 6802
92 Ga0316574_0000312 3300035398 Bacteria 18507
93 Ga0316582_0002108 3300036647 Bacteria 9187
94 Ga0316582_0020611 3300036647 Bacteria 3880
95 Ga0316584_0014573 3300036712 Bacteria 5600
96 Ga0316581_0003003 3300037588 Bacteria 4147
97 Ga0436364_0595566 3300037853 Bacteria 3043
98 Ga0400489_47647 3300039093 Unclassified 1018
99 Ga0400489_48135 3300039093 Bacteria 1640
100 Ga0436365_1747668 3300039437 Bacteria 3279
101 Ga0436365_1875063 3300039437 Bacteria 2022
102 Ga0436363_0015699 3300039450 Bacteria 9098
103 Ga0436363_0228444 3300039450 Bacteria 1157
104 Ga0436363_1234461 3300039450 Bacteria 6199
105 Ga0436362_0385495 3300039453 Bacteria 8942
106 Ga0450896_001424 3300042133 Bacteria 2938
107 Ga0466972_0003121 3300044658 Bacteria 8224
108 Ga0466965_0000199 3300044683 Bacteria 18781
109 Ga0466963_0311867 3300044694 Bacteria 1107
110 Ga0466968_0007715 3300044735 Bacteria 4098
111 Ga0466957_0007036 3300044842 Bacteria 6359
112 Ga0466960_0001587 3300044901 Bacteria 8318
113 Ga0451576_0000942 3300045051 Bacteria 54657
114 Ga0496108_0000090 3300048911 Bacteria 95201
115 Ga0496112_0096760 3300048915 Bacteria 2922
116 Ga0496112_0171593 3300048915 Bacteria 2134
117 Ga0501031_0010088 3300049568 Bacteria 6157
118 Ga0501031_0012228 3300049568 Bacteria 5595
119 Ga0501031_0019751 3300049568 Bacteria 4390
120 Ga0501032_0000625 3300049569 Bacteria 28736
121 Ga0501032_0035119 3300049569 Bacteria 3429
122 Ga0501033_0000061 3300049570 Bacteria 103115
123 Ga0501034_0001013 3300049571 Bacteria 40278
124 Ga0501034_0011640 3300049571 Bacteria 9106
125 Ga0501034_0107888 3300049571 Bacteria 2776
126 Ga0501036_0007941 3300049572 Bacteria 8683
127 Ga0501037_0001285 3300049573 Bacteria 18459
128 Ga0501037_0063852 3300049573 Bacteria 2684
129 Ga0501038_0002696 3300049574 Bacteria 16549
130 Ga0501038_0019805 3300049574 Bacteria 6057
131 Ga0501038_0061171 3300049574 Bacteria 3221
132 Ga0501039_0015234 3300049575 Bacteria 5884
133 Ga0501039_0019565 3300049575 Bacteria 5191
134 Ga0501039_0349814 3300049575 Bacteria 1161
135 Ga0501040_0004559 3300049576 Bacteria 8997
136 Ga0501040_0153592 3300049576 Bacteria 1625
137 Ga0501043_0000548 3300049579 Bacteria 33806
138 Ga0501046_0014094 3300049580 Bacteria 6751
139 Ga0501046_0067374 3300049580 Bacteria 2788
140 Ga0501047_0000018 3300049581 Bacteria 274180
141 Ga0501047_0044043 3300049581 Bacteria 4310
142 Ga0501047_0218465 3300049581 Bacteria 1763
143 Ga0501048_0006395 3300049582 Bacteria 8956
144 Ga0501048_0030819 3300049582 Bacteria 3881
145 Ga0501071_0044272 3300049587 Bacteria 3192
146 Ga0501071_0136604 3300049587 Bacteria 1824
147 Ga0501072_0005922 3300049588 Bacteria 9314
148 Ga0501074_0044542 3300049590 Bacteria 3212
149 Ga0501075_0001912 3300049591 Bacteria 13741
150 Ga0501076_0001540 3300049592 Bacteria 15438
151 Ga0501077_0013035 3300049593 Bacteria 5208
152 Ga0501079_0003425 3300049741 Bacteria 11647
153 Ga0501081_0001705 3300049743 Bacteria 13640
154 Ga0501081_0141030 3300049743 Bacteria 1727
155 Ga0501035_0046494 3300049822 Bacteria 3904
156 Ga0501044_0000294 3300049823 Bacteria 63500
157 Ga0501044_0055705 3300049823 Bacteria 4060
158 Ga0501045_0000008 3300049824 Bacteria 76934
159 Ga0501045_0013863 3300049824 Bacteria 5701
160 nmdc:mga03683_60153_c1 3300050489 Bacteria 1604
161 nmdc:mga00v17_3665_c1 3300050491 Bacteria 7936
162 nmdc:mga0k408_20150_c1 3300050493 Bacteria 3732
163 nmdc:mga0k408_7120_c1 3300050493 Bacteria 5977
164 nmdc:mga06z11_216479_c1 3300050494 Bacteria 1118
165 nmdc:mga0rr50_10812_c1 3300050513 Bacteria 5817
166 nmdc:mga0a205_836_c2 3300050515 Bacteria 9266
167 Ga0495619_0053086 3300053085 Bacteria 2680
168 Ga0501084_0010495 3300054114 Bacteria 7657
169 Ga0501084_0291572 3300054114 Bacteria 1378
170 Ga0501082_0001977 3300060353 Bacteria 18047
171 Ga0501082_0003687 3300060353 Bacteria 13384
172 Ga0530510_0003973 3300061734 Bacteria 10204
173 Ga0530510_0005786 3300061734 Bacteria 8569
174 8054281807 8054280661 Bacteria 4232245
175 Ga0070681_10106388
176 rootH1_10074516
177 Ga0070683_100003798
178 Ga0070668_100005178
179 Ga0070714_100023346
180 Ga0070711_100246696
181 Ga0070708_100004340
182 Ga0070708_100004528
183 Ga0070706_100002371
184 Ga0070706_100270066
185 Ga0070706_100283530
186 Ga0070707_100176917
187 Ga0070679_100007673
188 Ga0070679_100028483
189 Ga0070684_100001199
190 Ga0070697_100037181
191 Ga0070686_100323862
192 Ga0068855_100253382
193 Ga0070664_100065458
194 Ga0068857_100001059
195 Ga0068857_100006949
196 Ga0068856_100001108
197 Ga0068859_100260001
198 Ga0068864_100462393
199 Ga0070717_10016234
200 Ga0075365_10019918
201 Ga0075368_10008527
202 Ga0075364_10004297
203 Ga0075364_10092618
204 Ga0075367_10028102
205 Ga0075367_10031361
206 Ga0075366_10009903
207 Ga0075433_10006541
208 Ga0097620_100259976
209 Ga0075435_100089228
210 Ga0105240_10000170
211 Ga0105240_10031086
212 Ga0105240_10082331
213 Ga0105240_10259170
214 Ga0105239_10491724
215 Ga0157369_10046301
216 Ga0157372_10020664
217 Ga0157380_10253760
218 Ga0206356_11676890
219 Ga0213874_10002000
220 Ga0213874_10053543
221 Ga0213876_10033577
222 Ga0224712_10001179
223 Ga0207684_10002386
224 Ga0207707_10037935
225 Ga0207707_10210498
226 Ga0207695_10000208
227 Ga0207695_10189725
228 Ga0207695_10223801
229 Ga0207671_10316982
230 Ga0207652_10010479
231 Ga0207646_10099155
232 Ga0207650_10289839
233 Ga0207700_10009920
234 Ga0207661_10000933
235 Ga0207679_10018408
236 Ga0207668_10001127
237 Ga0207702_10006600
238 Ga0207641_10212709
239 Ga0207674_10000172
240 Ga0207674_10014239
241 Ga0268265_10060211
242 Ga0265323_10010019
243 Ga0265322_10008888
244 Ga0307515_10000241
245 Ga0265316_10068146
246 Ga0265316_10171696
247 Ga0307513_10014335
248 Ga0316575_10017608
249 Ga0316579_10003190
250 Ga0316576_10009258
251 Ga0316576_10053450
252 Ga0316576_10089832
253 Ga0316578_10201825
254 Ga0316577_10004392
255 Ga0316577_10055720
256 Ga0316577_10109408
257 Ga0307410_10000057
258 Ga0307406_10000265
259 Ga0307407_10004059
260 Ga0307409_100000171
261 Ga0307416_100000127
262 Ga0307414_10163696
263 Ga0307415_100000741
264 Ga0316585_10068849
265 Ga0373956_0003031
266 Ga0316574_0000312
267 Ga0316582_0002108
268 Ga0316582_0020611
269 Ga0316584_0014573
270 Ga0316581_0003003
271 Ga0436364_0595566
272 Ga0400489_47647
273 Ga0400489_48135
274 Ga0436365_1747668
275 Ga0436365_1875063
276 Ga0436363_0015699
277 Ga0436363_0228444
278 Ga0436363_1234461
279 Ga0436362_0385495
280 Ga0450896_001424
281 Ga0466972_0003121
282 Ga0466965_0000199
283 Ga0466963_0311867
284 Ga0466968_0007715
285 Ga0466957_0007036
286 Ga0466960_0001587
287 Ga0451576_0000942
288 Ga0496108_0000090
289 Ga0496112_0096760
290 Ga0496112_0171593
291 Ga0501031_0010088
292 Ga0501031_0012228
293 Ga0501031_0019751
294 Ga0501032_0000625
295 Ga0501032_0035119
296 Ga0501033_0000061
297 Ga0501034_0001013
298 Ga0501034_0011640
299 Ga0501034_0107888
300 Ga0501036_0007941
301 Ga0501037_0001285
302 Ga0501037_0063852
303 Ga0501038_0002696
304 Ga0501038_0019805
305 Ga0501038_0061171
306 Ga0501039_0015234
307 Ga0501039_0019565
308 Ga0501039_0349814
309 Ga0501040_0004559
310 Ga0501040_0153592
311 Ga0501043_0000548
312 Ga0501046_0014094
313 Ga0501046_0067374
314 Ga0501047_0000018
315 Ga0501047_0044043
316 Ga0501047_0218465
317 Ga0501048_0006395
318 Ga0501048_0030819
319 Ga0501071_0044272
320 Ga0501071_0136604
321 Ga0501072_0005922
322 Ga0501074_0044542
323 Ga0501075_0001912
324 Ga0501076_0001540
325 Ga0501077_0013035
326 Ga0501079_0003425
327 Ga0501081_0001705
328 Ga0501081_0141030
329 Ga0501035_0046494
330 Ga0501044_0000294
331 Ga0501044_0055705
332 Ga0501045_0000008
333 Ga0501045_0013863
334 nmdc:mga03683_60153_c1
335 nmdc:mga00v17_3665_c1
336 nmdc:mga0k408_20150_c1
337 nmdc:mga0k408_7120_c1
338 nmdc:mga06z11_216479_c1
339 nmdc:mga0rr50_10812_c1
340 nmdc:mga0a205_836_c2
341 Ga0495619_0053086
342 Ga0501084_0010495
343 Ga0501084_0291572
344 Ga0501082_0001977
345 Ga0501082_0003687
346 Ga0530510_0003973
347 Ga0530510_0005786
348 8054281807

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01715

IPPT

IPP transferase

49

290

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zm5-assembly1.cif.gz_A crystal structure of trna modification enzyme miaa in the complex with trna(phe) 0.9447 9 309
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.9384 7 304
2zm5-assembly1.cif.gz_A crystal structure of trna modification enzyme miaa in the complex with trna(phe) 0.9268 9 309
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.8997 7 304
2qgn-assembly1.cif.gz_A crystal structure of trna isopentenylpyrophosphate transferase (bh2366) from bacillus halodurans, northeast structural genomics consortium target bhr41. 0.8874 8 307
ID Description Score Start End Superfamily
af_P16384_121_194_1.10.20.140 Mainly Alpha;Orthogonal Bundle;Histone, subunit A; 0.9624 121 184 1.10.20.140
3exaA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.961 203 284 1.10.287.890
3crrA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.953 7 117 3.40.50.300
3exaA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.9494 203 284 1.10.287.890
3d3qB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9455 8 113 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A496JYQ4-F1-model_v4 deleted 0.9915 11 107
AF-A0A1X0QW13-F1-model_v4 IPPT-domain-containing protein 0.9735 12 113 GO:0005524
GO:0005739
GO:0006400
GO:0052381
AF-X1RR08-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.9733 49 267 GO:0005524
GO:0006400
GO:0052381
AF-A0A7V9VIV0-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase) 0.9689 5 309 GO:0005524
GO:0006400
GO:0052381
AF-A0A0K8TFV6-F1-model_v4 tRNA dimethylallyltransferase, mitochondrial 0.9664 5 113 GO:0005524
GO:0005739
GO:0006400
GO:0052381

Map