F263616

General Info

Members Datasets Scaffolds Average Seq Length
173 139 346 296

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8048406513|8048412302
Length 340
Sequence AIEAAALGKRFGWRQKGWALRDCTLRLPMGRVCAVVGPNGAGKSTLLAHAAGLLVPTEGSIAVLGTTPAAARERMAYVAQDKPLYPQLTVGETLRMGAELNPRRWDAAVAGRIVEEGGLDLGSRVRSLSGGQRTRVALALALGKRPELLLLDEPMADLDPLARHQLMGTLLADSAEHGTTVVMSSHVVAELEGSCDHLFLLGGGRVRLAGPMDALLAAHTLVTGPIGDLAPHTVVESRTTGRQMTALIRPEGRVGPGWQTDAPTLEELVLAHLRAPDAPALTLTDEDDTYVEEETYDAHDDGDAHDEGDAHDEGDRDGENGDDENGDGGTSGAETRGASV

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
3 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
4 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
5 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
6 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
7 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
8 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
9 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
10 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
11 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
12 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
13 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
14 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
15 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
16 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
17 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
18 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
19 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
20 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
21 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
22 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
23 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
24 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
25 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
26 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
27 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
28 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
29 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
30 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
31 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
32 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
33 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
34 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
35 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
36 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
37 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
38 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
39 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
40 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
41 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
42 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
43 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
44 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
45 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
46 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
47 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
48 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
49 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
50 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
51 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
52 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
53 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
54 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
55 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
56 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
57 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
58 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
59 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
60 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
61 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
62 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
63 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
64 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
65 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
66 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
67 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
68 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
69 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
70 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
71 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
72 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
73 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
74 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
75 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
76 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
77 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
78 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
79 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
80 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
81 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
82 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
83 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
84 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
85 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
86 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
87 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
88 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
89 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
90 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
91 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
92 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
93 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
94 2643221548 Streptomyces sp. Root55 Isolate Unclassified
95 2643221578 Streptomyces sp. Root63 Isolate Unclassified
96 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
97 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
98 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
99 2643221670 Streptomyces sp. Root431 Isolate Unclassified
100 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
101 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
102 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
103 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
104 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
105 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
106 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
107 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
108 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
109 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
110 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
111 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
112 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
113 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
114 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
115 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
116 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
117 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
118 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
119 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
120 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
121 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
122 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
123 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
124 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
125 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
126 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
127 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
128 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
129 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
130 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
131 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
132 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
133 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
134 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
135 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
136 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
137 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
138 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
139 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 69.94
Metatranscriptomes 1.16
Isolates 28.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.16
Nodule 1.16
Rhizoplane 1.16
Rhizosphere 73.99
Stem 0
Stem Tuber 0
Unclassified 0.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1120989 3300003578 Bacteria 5270
2 Ga0006562J51391_1120991 3300003578 Bacteria 3860
3 Ga0070698_100064694 3300005471 Unclassified 3684
4 Ga0068855_100549006 3300005563 Bacteria 1251
5 Ga0075363_100004787 3300006048 Bacteria 5969
6 Ga0105239_10291338 3300010375 Bacteria 1838
7 Ga0105246_10000101 3300011119 Bacteria 37467
8 Ga0157372_10047661 3300013307 Bacteria 4762
9 Ga0183367_1005 3300015688 Bacteria 652063
10 Ga0207647_10023737 3300025904 Bacteria 4052
11 Ga0307515_10001120 3300028794 Bacteria 61255
12 Ga0307515_10222344 3300028794 Bacteria 1702
13 Ga0307511_10000661 3300030521 Bacteria 36708
14 Ga0307513_10018430 3300031456 Bacteria 8339
15 Ga0307513_10057131 3300031456 Bacteria 4160
16 Ga0307513_10100143 3300031456 Bacteria 2924
17 Ga0307509_10036218 3300031507 Bacteria 5406
18 Ga0307509_10038521 3300031507 Bacteria 5214
19 Ga0307509_10119169 3300031507 Bacteria 2621
20 Ga0307514_10156677 3300031649 Bacteria 1516
21 Ga0307518_10050930 3300031838 Bacteria 3011
22 Ga0307507_10040546 3300033179 Bacteria 4675
23 Ga0307510_10069023 3300033180 Bacteria 3542
24 Ga0307510_10105992 3300033180 Bacteria 2576
25 Ga0395898_0005374 3300037466 Bacteria 13843
26 Ga0395898_0009525 3300037466 Bacteria 10199
27 Ga0395905_0448530 3300037471 Bacteria 1188
28 Ga0395901_0467250 3300038443 Bacteria 1288
29 Ga0439436_0000169 3300041404 Bacteria 15343
30 Ga0439439_0027021 3300041406 Bacteria 1448
31 Ga0451853_0771232 3300041512 Bacteria 2408
32 Ga0439449_0004917 3300042007 Bacteria 5145
33 Ga0439457_000338 3300042014 Bacteria 12990
34 Ga0439457_000546 3300042014 Bacteria 10976
35 Ga0450894_000233 3300042131 Bacteria 9958
36 Ga0450896_000138 3300042133 Bacteria 5609
37 Ga0450903_003645 3300042138 Bacteria 2660
38 Ga0450906_000251 3300042145 Bacteria 10342
39 Ga0450908_002917 3300042184 Bacteria 3325
40 Ga0466965_0022126 3300044683 Bacteria 3065
41 Ga0466961_0104681 3300044693 Bacteria 1782
42 Ga0466970_0001773 3300044765 Bacteria 10404
43 Ga0466970_0032006 3300044765 Bacteria 2779
44 Ga0466960_0012449 3300044901 Bacteria 3590
45 Ga0495592_0007538 3300046454 Bacteria 8150
46 Ga0495603_0000946 3300046455 Bacteria 16705
47 Ga0495603_0003905 3300046455 Bacteria 8878
48 Ga0495603_0032499 3300046455 Bacteria 3139
49 Ga0495629_0004448 3300046459 Bacteria 10501
50 Ga0495629_0025467 3300046459 Bacteria 4203
51 Ga0495629_0033103 3300046459 Bacteria 3657
52 Ga0495638_0027161 3300046460 Bacteria 3707
53 Ga0495651_0009176 3300046462 Bacteria 7593
54 Ga0495605_0021993 3300046474 Bacteria 3372
55 Ga0495662_0005569 3300046476 Bacteria 6302
56 Ga0495594_0002925 3300046499 Bacteria 8876
57 Ga0495594_0008117 3300046499 Bacteria 5400
58 Ga0495594_0020721 3300046499 Bacteria 3504
59 Ga0495594_0055285 3300046499 Bacteria 2188
60 Ga0495607_0125140 3300046501 Bacteria 1344
61 Ga0495606_0208223 3300046507 Bacteria 1109
62 Ga0495608_0019362 3300046511 Bacteria 4685
63 Ga0495610_0019747 3300046512 Bacteria 3758
64 Ga0495616_0004624 3300046513 Bacteria 8638
65 Ga0495620_0012764 3300046515 Bacteria 4322
66 Ga0495620_0033698 3300046515 Bacteria 2322
67 Ga0495643_0004322 3300046522 Bacteria 9996
68 Ga0495648_0078221 3300046524 Bacteria 1892
69 Ga0495666_0019717 3300046526 Bacteria 3344
70 Ga0495654_0145282 3300046530 Bacteria 1053
71 Ga0495640_0030358 3300046533 Bacteria 3870
72 Ga0495640_0032538 3300046533 Bacteria 3714
73 Ga0495586_0103050 3300046535 Bacteria 1585
74 Ga0495609_0014296 3300046538 Bacteria 3735
75 Ga0495597_0030528 3300046542 Bacteria 2456
76 Ga0495645_0187118 3300046543 Bacteria 1414
77 Ga0495622_0003835 3300046557 Bacteria 7021
78 Ga0495633_0007728 3300046558 Bacteria 6149
79 Ga0495667_0058377 3300046559 Bacteria 2535
80 Ga0495668_0108317 3300046616 Bacteria 1519
81 Ga0495611_0039129 3300046648 Bacteria 2110
82 Ga0495625_0018667 3300046660 Bacteria 5405
83 Ga0495635_0134061 3300046663 Bacteria 1688
84 Ga0495661_0154215 3300046665 Bacteria 1238
85 Ga0495588_0037120 3300046674 Bacteria 2474
86 Ga0495588_0106324 3300046674 Bacteria 1477
87 Ga0495657_0003340 3300046675 Bacteria 13140
88 Ga0495623_0060610 3300046679 Bacteria 2374
89 Ga0495613_0005874 3300046689 Bacteria 9185
90 Ga0495613_0009873 3300046689 Bacteria 7098
91 Ga0495613_0015403 3300046689 Bacteria 5686
92 Ga0495613_0173251 3300046689 Bacteria 1530
93 Ga0495624_0039031 3300046690 Bacteria 3046
94 Ga0495671_0006835 3300046692 Bacteria 6556
95 Ga0495649_0011507 3300046694 Bacteria 5185
96 Ga0495649_0037544 3300046694 Bacteria 2659
97 Ga0495589_0013967 3300046794 Bacteria 4140
98 Ga0495589_0094007 3300046794 Bacteria 1455
99 Ga0495660_0039266 3300046810 Bacteria 2629
100 Ga0495660_0101269 3300046810 Bacteria 1482
101 Ga0495636_0002139 3300047318 Bacteria 7588
102 Ga0495636_0045636 3300047318 Bacteria 1827
103 Ga0495636_0117494 3300047318 Bacteria 1174
104 Ga0495676_0002797 3300047321 Bacteria 15713
105 Ga0495676_0007479 3300047321 Bacteria 10018
106 Ga0495676_0017382 3300047321 Bacteria 6361
107 Ga0495680_0005917 3300047322 Bacteria 11429
108 Ga0495683_0196306 3300047323 Bacteria 913
109 Ga0495687_003057 3300047443 Bacteria 12553
110 Ga0495687_013508 3300047443 Bacteria 4256
111 Ga0495687_044342 3300047443 Bacteria 1934
112 Ga0495675_0016725 3300047444 Bacteria 4638
113 Ga0495679_044483 3300047446 Bacteria 1360
114 Ga0495685_019305 3300047447 Bacteria 2342
115 Ga0495685_031783 3300047447 Bacteria 1813
116 Ga0495681_0000290 3300047470 Bacteria 40038
117 Ga0495686_0019718 3300047472 Bacteria 4504
118 Ga0495614_0001775 3300048089 Bacteria 9423
119 Ga0495614_0013420 3300048089 Bacteria 3593
120 Ga0495626_0031817 3300048091 Bacteria 2536
121 Ga0496106_0120164 3300048909 Bacteria 2053
122 Ga0501044_0003094 3300049823 Bacteria 18839
123 nmdc:mga03n38_8033_c1 3300050490 Bacteria 3764
124 8048412302 8048406513 Bacteria 8936924
125 2585300574 2582581312 Bacteria 7308206
126 2616694858 2616644814 Bacteria 11555299
127 2616904664 2616644941 Bacteria 8510691
128 2643765164 2643221548 Bacteria 8053412
129 2643899244 2643221578 Bacteria 9213798
130 2643942476 2643221587 Bacteria 7586415
131 2644016176 2643221601 Bacteria 7493239
132 2644179659 2643221631 Bacteria 8168043
133 2644390091 2643221670 Bacteria 6497041
134 2644403427 2643221673 Bacteria 9196637
135 2644429557 2643221677 Bacteria 7584031
136 2644460997 2643221682 Bacteria 6743283
137 2785343095 2784746763 Bacteria 9783172
138 2793980908 2791355406 Bacteria 11364898
139 2804846022 2802429296 Bacteria 7227771
140 2808842238 2808606359 Bacteria 9866990
141 2808920770 2808606375 Bacteria 9466072
142 2812357878 2811994879 Bacteria 9313447
143 2819695602 2818991463 Bacteria 7948711
144 2819744534 2818991472 Bacteria 10089953
145 2862390245 2862382967 Bacteria 10317375
146 2862707555 2862705112 Bacteria 6563286
147 2863404387 2863404153 Bacteria 9672205
148 2866619156 2866612099 Bacteria 7543886
149 2873155540 2873151551 Bacteria 8625867
150 2875395471 2875391855 Bacteria 7600475
151 2912719747 2912715099 Bacteria 9460473
152 2912731224 2912723979 Bacteria 8557534
153 2912760980 2912757875 Bacteria 7940295
154 2918505388 2918501144 Bacteria 8668083
155 2919469346 2919468124 Bacteria 9133025
156 2946049795 2946045630 Bacteria 8527308
157 2946067987 2946064051 Bacteria 8957905
158 2966601861 2966598605 Bacteria 7676064
159 2990065964 2990059506 Bacteria 9321252
160 2997606683 2997600082 Bacteria 9896405
161 8008487158 8008485437 Bacteria 7198341
162 8008567051 8008558824 Bacteria 10610750
163 8008578713 8008574985 Bacteria 7815457
164 8025418324 8025413630 Bacteria 7014048
165 8025525081 8025524527 Bacteria 7197316
166 8025537784 8025530807 Bacteria 8495698
167 8047899710 8047893842 Bacteria 11723082
168 8048129007 8048127548 Bacteria 11053136
169 8048359220 8048356638 Bacteria 11044339
170 8048376659 8048369669 Bacteria 11666822
171 8048385712 8048379754 Bacteria 11877923
172 8056213974 8056207758 Bacteria 8639239
173 8056835229 8056829672 Bacteria 9045328
174 Ga0006562J51391_1120989
175 Ga0006562J51391_1120991
176 Ga0070698_100064694
177 Ga0068855_100549006
178 Ga0075363_100004787
179 Ga0105239_10291338
180 Ga0105246_10000101
181 Ga0157372_10047661
182 Ga0183367_1005
183 Ga0207647_10023737
184 Ga0307515_10001120
185 Ga0307515_10222344
186 Ga0307511_10000661
187 Ga0307513_10018430
188 Ga0307513_10057131
189 Ga0307513_10100143
190 Ga0307509_10036218
191 Ga0307509_10038521
192 Ga0307509_10119169
193 Ga0307514_10156677
194 Ga0307518_10050930
195 Ga0307507_10040546
196 Ga0307510_10069023
197 Ga0307510_10105992
198 Ga0395898_0005374
199 Ga0395898_0009525
200 Ga0395905_0448530
201 Ga0395901_0467250
202 Ga0439436_0000169
203 Ga0439439_0027021
204 Ga0451853_0771232
205 Ga0439449_0004917
206 Ga0439457_000338
207 Ga0439457_000546
208 Ga0450894_000233
209 Ga0450896_000138
210 Ga0450903_003645
211 Ga0450906_000251
212 Ga0450908_002917
213 Ga0466965_0022126
214 Ga0466961_0104681
215 Ga0466970_0001773
216 Ga0466970_0032006
217 Ga0466960_0012449
218 Ga0495592_0007538
219 Ga0495603_0000946
220 Ga0495603_0003905
221 Ga0495603_0032499
222 Ga0495629_0004448
223 Ga0495629_0025467
224 Ga0495629_0033103
225 Ga0495638_0027161
226 Ga0495651_0009176
227 Ga0495605_0021993
228 Ga0495662_0005569
229 Ga0495594_0002925
230 Ga0495594_0008117
231 Ga0495594_0020721
232 Ga0495594_0055285
233 Ga0495607_0125140
234 Ga0495606_0208223
235 Ga0495608_0019362
236 Ga0495610_0019747
237 Ga0495616_0004624
238 Ga0495620_0012764
239 Ga0495620_0033698
240 Ga0495643_0004322
241 Ga0495648_0078221
242 Ga0495666_0019717
243 Ga0495654_0145282
244 Ga0495640_0030358
245 Ga0495640_0032538
246 Ga0495586_0103050
247 Ga0495609_0014296
248 Ga0495597_0030528
249 Ga0495645_0187118
250 Ga0495622_0003835
251 Ga0495633_0007728
252 Ga0495667_0058377
253 Ga0495668_0108317
254 Ga0495611_0039129
255 Ga0495625_0018667
256 Ga0495635_0134061
257 Ga0495661_0154215
258 Ga0495588_0037120
259 Ga0495588_0106324
260 Ga0495657_0003340
261 Ga0495623_0060610
262 Ga0495613_0005874
263 Ga0495613_0009873
264 Ga0495613_0015403
265 Ga0495613_0173251
266 Ga0495624_0039031
267 Ga0495671_0006835
268 Ga0495649_0011507
269 Ga0495649_0037544
270 Ga0495589_0013967
271 Ga0495589_0094007
272 Ga0495660_0039266
273 Ga0495660_0101269
274 Ga0495636_0002139
275 Ga0495636_0045636
276 Ga0495636_0117494
277 Ga0495676_0002797
278 Ga0495676_0007479
279 Ga0495676_0017382
280 Ga0495680_0005917
281 Ga0495683_0196306
282 Ga0495687_003057
283 Ga0495687_013508
284 Ga0495687_044342
285 Ga0495675_0016725
286 Ga0495679_044483
287 Ga0495685_019305
288 Ga0495685_031783
289 Ga0495681_0000290
290 Ga0495686_0019718
291 Ga0495614_0001775
292 Ga0495614_0013420
293 Ga0495626_0031817
294 Ga0496106_0120164
295 Ga0501044_0003094
296 nmdc:mga03n38_8033_c1
297 8048412302
298 2585300574
299 2616694858
300 2616904664
301 2643765164
302 2643899244
303 2643942476
304 2644016176
305 2644179659
306 2644390091
307 2644403427
308 2644429557
309 2644460997
310 2785343095
311 2793980908
312 2804846022
313 2808842238
314 2808920770
315 2812357878
316 2819695602
317 2819744534
318 2862390245
319 2862707555
320 2863404387
321 2866619156
322 2873155540
323 2875395471
324 2912719747
325 2912731224
326 2912760980
327 2918505388
328 2919469346
329 2946049795
330 2946067987
331 2966601861
332 2990065964
333 2997606683
334 8008487158
335 8008567051
336 8008578713
337 8025418324
338 8025525081
339 8025537784
340 8047899710
341 8048129007
342 8048359220
343 8048376659
344 8048385712
345 8056213974
346 8056835229

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

20

156

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lj6-assembly1.cif.gz_A structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p6522) 0.9041 4 215
1l2t-assembly1.cif.gz_B dimeric structure of mj0796, a bacterial abc transporter cassette 0.9032 6 215
8bms-assembly1.cif.gz_B cryo-em structure of the mutant solitary ecf module 2eq in msp2n2 lipid nanodiscs in the atpase closed and atp-bound conformation 0.9028 5 220
8eop-assembly1.cif.gz_A cryo-em structure of nanodisc reconstituted human abca7 eq mutant in atp bound closed state 0.8988 5 218
3tif-assembly1.cif.gz_B dimeric structure of a post-hydrolysis state of the atp-binding cassette mj0796 bound to adp and pi 0.8977 6 215
ID Description Score Start End Superfamily
af_Q58429_1_224_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.92 2 218 3.40.50.300
af_P9WQL7_7_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.918 1 221 3.40.50.300
af_Q55EH8_3_247_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.918 2 220 3.40.50.300
af_O53149_2_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9141 1 218 3.40.50.300
af_Q2FVB4_1_230_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9139 4 218 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1G0AQV2-F1-model_v4 ABC transporter ATP-binding protein 0.9355 4 216 GO:0005524
GO:0016887
AF-A0A2G2M205-F1-model_v4 Multidrug ABC transporter ATP-binding protein 0.9324 2 220 GO:0005524
GO:0016887
AF-A0A3N5IV82-F1-model_v4 ATP-binding cassette domain-containing protein 0.9317 2 208 GO:0005524
GO:0016887
AF-A0A0B7MDK2-F1-model_v4 ABC transporter related protein 0.9299 1 190 GO:0005524
GO:0016887
AF-A0A6G2UJN6-F1-model_v4 ATP-binding cassette domain-containing protein 0.9289 3 190 GO:0005524
GO:0016887
GO:0046677

Map