F263560

General Info

Members Datasets Scaffolds Average Seq Length
173 152 346 822

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2784746763|2785343247
Length 907
Sequence EHSPTQPVPPGGADTAPGPPESPEPGGAPRSLAEALRGRDDRSLAALLRARPDLITPVPTDLTQLATRAGTRASVVRALERLDRFALQSAQALAVASDPAPYDELLGLMAGSEAGAGATADDTPDPAVAAVAAALPHAVRTLRDQALVWGPDSRLRLVRTARELLAPSPQHPSPTGLGPTVGEATAGMSPGRVQEIVTAVGLPRTHDSVSAVASLSGLFTDGPRMAALLGTAPAEALDVLTRLVWGPPYGQVTANPAPHLRWLLDRGLLLPTAPGTVVIPREVALHLRAGRAHRTVEPVPPAVEAAGAHRPQVVDATAAGQAYTALATMEELLKDWDEGGPAVLRAGGLSVRDLKRTAVALDVPEPVAAFWVELAYAAGLLASDGEADERYAATPAYDAWLELPPAERWAGLASAWLAATRTPGVVGERDAKERTLSALGPGLDRSAAPEVRHRVLTLLAGLPEGTSPTPDSVLARLHWERPTRAAQPSQAAQPPVRAEQGPAPKQGRAPQAQGGQPDDLRARLARWTLAEAESLGITGRGALSSHGRALLGLPPGTAATADLPETPGDKLPAHHVPTPAAPFPSPVPVVERTVAAARAARLLAPLLPEPLDHVLLQADLTAVAPGPLRRPLADMLGVVADVESKGGATVYRFTPGSVRRALDAGQTASDLHDFLNTHSRTPVPQPLAYLIDDVARRHGHLRIGAASAYVRCDDDAMLSEILADKRSQGLGLRRLAPTVLAAQADPAALLEGLRAMGYAPAAESAEGDVLITRALAHRTPARTAPEPVPDGPPAPDDTLLAAAIRAIRAGDLASTAPRRTSGTPVPSGTLPRTSSAETLATMQAAVLTGEALWIGYVNAEGSASQRVIAPVRVEGGFVTAYDHTADEVRTFPLHRITGVAELADDSI

Samples

Sample ID Description Type Environment
1 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
4 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
5 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
6 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
7 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
8 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
9 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
10 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
11 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
12 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
13 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
14 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
15 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
16 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
17 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
18 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
19 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
20 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
21 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
22 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
23 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
24 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
25 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
26 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
27 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
28 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
29 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
30 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
31 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
32 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
33 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
34 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
35 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
36 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
37 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
38 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
39 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
40 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
41 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
42 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
43 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
44 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
45 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
46 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
47 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
48 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
49 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
50 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
51 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
52 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
53 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
54 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
55 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
56 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
57 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
58 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
59 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
60 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
61 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
62 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
63 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
64 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
65 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
66 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
67 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
74 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
77 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
78 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
79 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
80 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
81 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
82 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
83 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
84 2643221647 Streptomyces sp. Root369 Isolate Unclassified
85 2643221670 Streptomyces sp. Root431 Isolate Unclassified
86 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
87 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
88 2643221679 Angustibacter sp. Root456 Isolate Unclassified
89 2643221714 Streptomyces sp. Root264 Isolate Unclassified
90 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
91 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
92 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
93 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
94 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
95 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
96 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
97 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
98 2808606448 Streptomyces sp. 193411 Isolate Unclassified
99 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
100 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
101 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
102 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
103 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
104 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
105 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
106 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
107 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
108 2867369537 Streptomyces sp. Z26 Isolate Unclassified
109 2867475112 Streptomyces sp. TM32 Isolate Unclassified
110 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
111 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
112 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
113 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
114 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
115 2891562705 Microbispora tritici MT50 Isolate Unclassified
116 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
117 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
118 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
119 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
120 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
121 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
122 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
123 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
124 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
125 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
126 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
127 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
128 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
129 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
130 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
131 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
132 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
133 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
134 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
135 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
136 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
137 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
138 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
139 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
140 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
141 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
142 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
143 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
144 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
145 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
146 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
147 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
148 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
149 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
150 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
151 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
152 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 55.49
Metatranscriptomes 0
Isolates 44.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.89
Nodule 0.58
Rhizoplane 1.73
Rhizosphere 65.32
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25160J50197_1002887 3300003354 Bacteria 7863
2 JGI25160J50197_1004287 3300003354 Bacteria 6186
3 Ga0070682_100008231 3300005337 Bacteria 5880
4 Ga0068856_100080746 3300005614 Bacteria 3226
5 Ga0105245_10056860 3300009098 Bacteria 3517
6 Ga0105246_10001000 3300011119 Bacteria 16237
7 Ga0182007_10002608 3300015262 Bacteria 8881
8 Ga0183367_1005 3300015688 Bacteria 652063
9 Ga0213875_10001733 3300021388 Bacteria 13682
10 Ga0209758_1005903 3300025297 Bacteria 9116
11 Ga0207426_1001574 3300025302 Bacteria 18395
12 Ga0207426_1007886 3300025302 Bacteria 4389
13 Ga0207647_10005104 3300025904 Bacteria 9672
14 Ga0307515_10000732 3300028794 Bacteria 75720
15 Ga0307515_10092622 3300028794 Bacteria 3759
16 Ga0307511_10001033 3300030521 Bacteria 29558
17 Ga0307512_10002037 3300030522 Bacteria 26685
18 Ga0307513_10020218 3300031456 Bacteria 7899
19 Ga0307509_10043831 3300031507 Bacteria 4837
20 Ga0307508_10015201 3300031616 Bacteria 7015
21 Ga0307516_10016466 3300031730 Bacteria 7728
22 Ga0307510_10036985 3300033180 Bacteria 5425
23 Ga0307510_10052679 3300033180 Bacteria 4286
24 Ga0395898_0007727 3300037466 Bacteria 11416
25 Ga0395898_0025008 3300037466 Bacteria 6020
26 Ga0436364_0258391 3300037853 Bacteria 19221
27 Ga0439436_0005641 3300041404 Bacteria 3838
28 Ga0439433_0002141 3300041999 Bacteria 4157
29 Ga0439448_0001349 3300042005 Bacteria 6291
30 Ga0439449_0001993 3300042007 Bacteria 8026
31 Ga0439457_002810 3300042014 Bacteria 4867
32 Ga0450894_000518 3300042131 Bacteria 6583
33 Ga0450898_000187 3300042134 Bacteria 6553
34 Ga0450903_000461 3300042138 Bacteria 8583
35 Ga0439458_0000589 3300042157 Bacteria 9359
36 Ga0466972_0007384 3300044658 Bacteria 5522
37 Ga0466972_0021311 3300044658 Bacteria 3232
38 Ga0466966_0028903 3300044684 Bacteria 3609
39 Ga0466961_0007410 3300044693 Bacteria 6984
40 Ga0466961_0024300 3300044693 Bacteria 3898
41 Ga0466963_0019427 3300044694 Bacteria 4262
42 Ga0466964_0000503 3300044706 Bacteria 12155
43 Ga0466970_0003859 3300044765 Bacteria 7336
44 Ga0466960_0004106 3300044901 Bacteria 5662
45 Ga0466959_0000404 3300045049 Bacteria 25274
46 Ga0466967_0024189 3300045976 Bacteria 4990
47 Ga0466967_0037555 3300045976 Bacteria 4146
48 Ga0495603_0000568 3300046455 Bacteria 20742
49 Ga0495603_0015603 3300046455 Bacteria 4598
50 Ga0495629_0006746 3300046459 Bacteria 8488
51 Ga0495629_0050857 3300046459 Bacteria 2901
52 Ga0495639_0004854 3300046475 Bacteria 5768
53 Ga0495662_0006417 3300046476 Bacteria 5872
54 Ga0495606_0029259 3300046507 Bacteria 3871
55 Ga0495620_0009759 3300046515 Bacteria 5091
56 Ga0495628_0026876 3300046516 Bacteria 4685
57 Ga0495630_0029211 3300046517 Bacteria 4098
58 Ga0495631_0005774 3300046518 Bacteria 6456
59 Ga0495586_0013433 3300046535 Bacteria 4343
60 Ga0495587_0001879 3300046536 Bacteria 13968
61 Ga0495597_0014306 3300046542 Bacteria 3780
62 Ga0495625_0018804 3300046660 Bacteria 5382
63 Ga0495635_0002101 3300046663 Bacteria 13532
64 Ga0495613_0001277 3300046689 Bacteria 19224
65 Ga0495624_0006599 3300046690 Bacteria 8215
66 Ga0495660_0049376 3300046810 Bacteria 2297
67 Ga0495604_0000208 3300047317 Bacteria 53826
68 Ga0495676_0005286 3300047321 Bacteria 11820
69 Ga0495676_0007702 3300047321 Bacteria 9877
70 Ga0495676_0011038 3300047321 Bacteria 8166
71 Ga0495680_0021130 3300047322 Bacteria 5455
72 Ga0495687_002090 3300047443 Bacteria 16780
73 Ga0495685_000711 3300047447 Bacteria 10210
74 Ga0495685_001626 3300047447 Bacteria 6935
75 Ga0495681_0001415 3300047470 Bacteria 18048
76 Ga0495686_0012334 3300047472 Bacteria 5983
77 Ga0496100_0045202 3300048903 Bacteria 2825
78 Ga0496101_0010206 3300048904 Bacteria 6198
79 Ga0496106_0010020 3300048909 Bacteria 7001
80 Ga0501031_0035653 3300049568 Bacteria 3245
81 Ga0501032_0022180 3300049569 Bacteria 4405
82 Ga0501032_0025065 3300049569 Bacteria 4113
83 Ga0501033_0004745 3300049570 Bacteria 10875
84 Ga0501033_0012391 3300049570 Bacteria 6509
85 Ga0501033_0019903 3300049570 Bacteria 5072
86 Ga0501034_0002305 3300049571 Bacteria 23363
87 Ga0501034_0032394 3300049571 Bacteria 5308
88 Ga0501036_0027031 3300049572 Bacteria 4848
89 Ga0501038_0023588 3300049574 Bacteria 5498
90 Ga0501080_0005041 3300049742 Bacteria 11765
91 Ga0501035_0001247 3300049822 Bacteria 26439
92 Ga0501035_0080870 3300049822 Bacteria 2868
93 Ga0501044_0000276 3300049823 Bacteria 65263
94 Ga0501044_0002622 3300049823 Bacteria 20446
95 Ga0501044_0033674 3300049823 Bacteria 5382
96 Ga0466962_0016394 3300061719 Bacteria 3573
97 2785343247 2784746763 Bacteria 9783172
98 2547408162 2547132111 Bacteria 8013147
99 2554257799 2554235005 Bacteria 6457341
100 2585308847 2582581313 Bacteria 10042643
101 2585313536 2582581314 Bacteria 11452267
102 2616695024 2616644814 Bacteria 11555299
103 2643942230 2643221587 Bacteria 7586415
104 2644262334 2643221647 Bacteria 10741251
105 2644389901 2643221670 Bacteria 6497041
106 2644429313 2643221677 Bacteria 7584031
107 2644437202 2643221678 Bacteria 9540101
108 2644444870 2643221679 Bacteria 3839507
109 2644628944 2643221714 Bacteria 9015452
110 2676495905 2675903060 Bacteria 10051191
111 2768643539 2767802112 Bacteria 6465194
112 2784588616 2784132148 Bacteria 8627943
113 2785369558 2784746768 Bacteria 10036182
114 2786670660 2786546132 Bacteria 10419719
115 2804846976 2802429296 Bacteria 7227771
116 2808842101 2808606359 Bacteria 9866990
117 2808920627 2808606375 Bacteria 9466072
118 2809232229 2808606448 Bacteria 8656184
119 2812358035 2811994879 Bacteria 9313447
120 2812480470 2811994917 Bacteria 7761064
121 2852636604 2852635781 Bacteria 8251373
122 2856744606 2856741275 Bacteria 8096094
123 2862179431 2862178590 Bacteria 8583590
124 2862285714 2862281513 Bacteria 9621493
125 2862511756 2862507626 Bacteria 9425308
126 2863404552 2863404153 Bacteria 9672205
127 2867348880 2867346516 Bacteria 7608576
128 2867371938 2867369537 Bacteria 6501581
129 2867475180 2867475112 Bacteria 6909112
130 2873155677 2873151551 Bacteria 8625867
131 2877681060 2877676314 Bacteria 9512378
132 2884703581 2884693830 Bacteria 11273186
133 2891398912 2891395885 Bacteria 9251614
134 2891559120 2891554331 Bacteria 8812224
135 2891569296 2891562705 Bacteria 8039471
136 2895432059 2895427314 Bacteria 13147766
137 2895443391 2895442618 Bacteria 11027144
138 2912719902 2912715099 Bacteria 9460473
139 2912724305 2912723979 Bacteria 8557534
140 2918505588 2918501144 Bacteria 8668083
141 2919469472 2919468124 Bacteria 9133025
142 2935393369 2935390628 Bacteria 7043367
143 2946067807 2946064051 Bacteria 8957905
144 2946075960 2946072368 Bacteria 8999607
145 2954007346 2954002825 Bacteria 9173742
146 2954386177 2954380949 Bacteria 10050426
147 2954676983 2954673503 Bacteria 9685905
148 2954687175 2954682443 Bacteria 9862841
149 2954696819 2954691527 Bacteria 10720516
150 2954705319 2954701450 Bacteria 10834262
151 2954716192 2954711539 Bacteria 10867210
152 2954726135 2954721474 Bacteria 10456478
153 2954735675 2954731030 Bacteria 10243860
154 2954745061 2954740390 Bacteria 10229294
155 2954754531 2954749733 Bacteria 10366972
156 2990046969 2990044586 Bacteria 6603797
157 2990065890 2990059506 Bacteria 9321252
158 2995465882 2995463766 Bacteria 8577691
159 2995466736 2995463766 Bacteria 8577691
160 2997457792 2997451912 Bacteria 8492419
161 2997600371 2997600082 Bacteria 9896405
162 3006393934 3006393351 Bacteria 6615579
163 3006500806 3006493962 Bacteria 8825450
164 8008485442 8008485437 Bacteria 7198341
165 8008567250 8008558824 Bacteria 10610750
166 8008578840 8008574985 Bacteria 7815457
167 8023630126 8023623736 Bacteria 8593882
168 8025417782 8025413630 Bacteria 7014048
169 8025529916 8025524527 Bacteria 7197316
170 8048412702 8048406513 Bacteria 8936924
171 8054166509 8054160619 Bacteria 7783213
172 8056669517 8056667051 Bacteria 6953971
173 8056833580 8056829672 Bacteria 9045328
174 JGI25160J50197_1002887
175 JGI25160J50197_1004287
176 Ga0070682_100008231
177 Ga0068856_100080746
178 Ga0105245_10056860
179 Ga0105246_10001000
180 Ga0182007_10002608
181 Ga0183367_1005
182 Ga0213875_10001733
183 Ga0209758_1005903
184 Ga0207426_1001574
185 Ga0207426_1007886
186 Ga0207647_10005104
187 Ga0307515_10000732
188 Ga0307515_10092622
189 Ga0307511_10001033
190 Ga0307512_10002037
191 Ga0307513_10020218
192 Ga0307509_10043831
193 Ga0307508_10015201
194 Ga0307516_10016466
195 Ga0307510_10036985
196 Ga0307510_10052679
197 Ga0395898_0007727
198 Ga0395898_0025008
199 Ga0436364_0258391
200 Ga0439436_0005641
201 Ga0439433_0002141
202 Ga0439448_0001349
203 Ga0439449_0001993
204 Ga0439457_002810
205 Ga0450894_000518
206 Ga0450898_000187
207 Ga0450903_000461
208 Ga0439458_0000589
209 Ga0466972_0007384
210 Ga0466972_0021311
211 Ga0466966_0028903
212 Ga0466961_0007410
213 Ga0466961_0024300
214 Ga0466963_0019427
215 Ga0466964_0000503
216 Ga0466970_0003859
217 Ga0466960_0004106
218 Ga0466959_0000404
219 Ga0466967_0024189
220 Ga0466967_0037555
221 Ga0495603_0000568
222 Ga0495603_0015603
223 Ga0495629_0006746
224 Ga0495629_0050857
225 Ga0495639_0004854
226 Ga0495662_0006417
227 Ga0495606_0029259
228 Ga0495620_0009759
229 Ga0495628_0026876
230 Ga0495630_0029211
231 Ga0495631_0005774
232 Ga0495586_0013433
233 Ga0495587_0001879
234 Ga0495597_0014306
235 Ga0495625_0018804
236 Ga0495635_0002101
237 Ga0495613_0001277
238 Ga0495624_0006599
239 Ga0495660_0049376
240 Ga0495604_0000208
241 Ga0495676_0005286
242 Ga0495676_0007702
243 Ga0495676_0011038
244 Ga0495680_0021130
245 Ga0495687_002090
246 Ga0495685_000711
247 Ga0495685_001626
248 Ga0495681_0001415
249 Ga0495686_0012334
250 Ga0496100_0045202
251 Ga0496101_0010206
252 Ga0496106_0010020
253 Ga0501031_0035653
254 Ga0501032_0022180
255 Ga0501032_0025065
256 Ga0501033_0004745
257 Ga0501033_0012391
258 Ga0501033_0019903
259 Ga0501034_0002305
260 Ga0501034_0032394
261 Ga0501036_0027031
262 Ga0501038_0023588
263 Ga0501080_0005041
264 Ga0501035_0001247
265 Ga0501035_0080870
266 Ga0501044_0000276
267 Ga0501044_0002622
268 Ga0501044_0033674
269 Ga0466962_0016394
270 2785343247
271 2547408162
272 2554257799
273 2585308847
274 2585313536
275 2616695024
276 2643942230
277 2644262334
278 2644389901
279 2644429313
280 2644437202
281 2644444870
282 2644628944
283 2676495905
284 2768643539
285 2784588616
286 2785369558
287 2786670660
288 2804846976
289 2808842101
290 2808920627
291 2809232229
292 2812358035
293 2812480470
294 2852636604
295 2856744606
296 2862179431
297 2862285714
298 2862511756
299 2863404552
300 2867348880
301 2867371938
302 2867475180
303 2873155677
304 2877681060
305 2884703581
306 2891398912
307 2891559120
308 2891569296
309 2895432059
310 2895443391
311 2912719902
312 2912724305
313 2918505588
314 2919469472
315 2935393369
316 2946067807
317 2946075960
318 2954007346
319 2954386177
320 2954676983
321 2954687175
322 2954696819
323 2954705319
324 2954716192
325 2954726135
326 2954735675
327 2954745061
328 2954754531
329 2990046969
330 2990065890
331 2995465882
332 2995466736
333 2997457792
334 2997600371
335 3006393934
336 3006500806
337 8008485442
338 8008567250
339 8008578840
340 8023630126
341 8025417782
342 8025529916
343 8048412702
344 8054166509
345 8056669517
346 8056833580

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13625

Helicase_C_3

Helicase conserved C-terminal domain

614

736

0.99

PF13280

WYL

WYL domain

837

906

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qfz-assembly4.cif.gz_H brxr, a wyl-domain containing transcriptional regulator 0.9013 725 793
7qfz-assembly4.cif.gz_G brxr, a wyl-domain containing transcriptional regulator 0.8768 725 795
7t8l-assembly1.cif.gz_A brxr from acinetobacter brex type i phage restriction system 0.8546 720 795
7t8l-assembly1.cif.gz_B brxr from acinetobacter brex type i phage restriction system 0.8168 718 795
7u02-assembly1.cif.gz_M structure of the c. crescentus drid c-domain bound to ssdna 0.8082 719 790
ID Description Score Start End Superfamily
2vxzA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7874 286 354 1.10.10.10
af_Q57978_7_82_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7817 292 365 1.10.10.10
af_Q57738_133_209_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7787 291 362 1.10.10.10
af_Q69T55_240_282_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.7781 754 779 2.30.30.30
af_O53238_2_75_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7779 287 364 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A5N8X6G4-F1-model_v4 DNA-binding protein 0.9985 3 132 GO:0003677
AF-A0A6G2QW49-F1-model_v4 DNA-binding protein 0.9984 2 262 GO:0003677
AF-A0A6N9VUW2-F1-model_v4 deleted 0.9965 512 600
AF-A0A6G3TTN8-F1-model_v4 DNA-binding protein 0.9955 2 117 GO:0003677
AF-A0A3D0QX97-F1-model_v4 DNA-binding protein 0.9941 721 795 GO:0003677

Map