F263556

General Info

Members Datasets Scaffolds Average Seq Length
173 132 154 414

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2734482000|2734972628
Length 479
Sequence KGTVLEVAGHEVTVTHPDKMVFPEAERPGGGGTGVTKLDLVQYYLAVAEGALRGVSGRPMVLKRFVKGIDEEAFFQKRAPSNRPSFVEVAELKYASGRSAEEAVIRDAAGLAWVVNLGCIDLNPHPVLAEDLDRPDELRIDLDPMPGVEWGQVVEVAFVARQVLADHGLTSWPKTSGSRGFHIYARVEPTRPYKDLRLAAETVAREVENRVPELATARWWKEERGSQVFVDFNQNAKDRTIASAWSVRAVADARVSTPLRWDEVEHCRMEELTIATVLPRYAEQGDPWAGIENERGTLDALLALAKQLGPAEKPPKGVGRRQSTMPLIEIARTRTKPEALEWLEVWKAKYPEVAAQLEPVDVLVDGMRGRSSLWYRIRINLQHVPEAQRPPQEELLADYNPGPVRNGRAGGPATPAPLPRIPRTPNRAVRRASRAARTGWPPSRPARGRTPRPGFARTSSPAAPAAAGGAGRAPSPRRR

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2643221549 Agromyces sp. Root1464 Isolate Unclassified
3 2643221575 Microbacterium sp. Root61 Isolate Unclassified
4 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
5 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
6 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
7 2734482000 Kineosporia rhizophila JCM 9960 Isolate Unclassified
8 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
9 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
10 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
11 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
12 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
13 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
14 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
15 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
16 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
17 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
18 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
19 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
20 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
21 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
26 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
27 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
28 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
32 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
45 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
46 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
80 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
81 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
90 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
91 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
92 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
93 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
94 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
95 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
96 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
102 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
103 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
104 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
105 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
106 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
107 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
129 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
130 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
131 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
132 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.44
Metatranscriptomes 0.58
Isolates 10.98

Biome Distribution

Category Percentage (%)
Aerial Root 0.58
Bulb 0
Endosphere 6.36
Nodule 0
Rhizoplane 7.51
Rhizosphere 62.43
Stem 0
Stem Tuber 0
Unclassified 23.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1144348 3300003578 Bacteria 22011
2 Ga0068869_100039589 3300005334 Bacteria 3366
3 Ga0070668_100004518 3300005347 Bacteria 10319
4 Ga0070669_100002332 3300005353 Bacteria 13721
5 Ga0070667_100000782 3300005367 Bacteria 29910
6 Ga0070703_10000021 3300005406 Bacteria 75160
7 Ga0070709_10040514 3300005434 Bacteria 2864
8 Ga0070713_100016582 3300005436 Bacteria 5541
9 Ga0070705_100132929 3300005440 Bacteria 1626
10 Ga0070708_100000970 3300005445 Bacteria 21830
11 Ga0070708_100008401 3300005445 Bacteria 8287
12 Ga0070708_100031190 3300005445 Bacteria 4611
13 Ga0070663_100012654 3300005455 Bacteria 5347
14 Ga0070706_100002099 3300005467 Bacteria 20324
15 Ga0070706_100008081 3300005467 Bacteria 9812
16 Ga0070706_100015700 3300005467 Bacteria 6995
17 Ga0070706_100155868 3300005467 Bacteria 2132
18 Ga0070707_100007398 3300005468 Bacteria 10197
19 Ga0070707_100040698 3300005468 Bacteria 4446
20 Ga0070698_100001318 3300005471 Bacteria 27643
21 Ga0070698_100017593 3300005471 Bacteria 7533
22 Ga0068853_100038059 3300005539 Bacteria 4096
23 Ga0070665_100013523 3300005548 Bacteria 8211
24 Ga0070704_100220172 3300005549 Bacteria 1543
25 Ga0068859_100002413 3300005617 Bacteria 19034
26 Ga0068863_100041458 3300005841 Bacteria 4378
27 Ga0068858_100005510 3300005842 Bacteria 12395
28 Ga0068860_100000021 3300005843 Bacteria 282612
29 Ga0068862_100000015 3300005844 Bacteria 250184
30 Ga0081455_10020483 3300005937 Bacteria 6224
31 Ga0075365_10010307 3300006038 Bacteria 5431
32 Ga0075363_100014209 3300006048 Bacteria 3883
33 Ga0075362_10006968 3300006177 Bacteria 4244
34 Ga0075369_10005596 3300006186 Bacteria 4704
35 Ga0075369_10005942 3300006186 Bacteria 4591
36 Ga0075436_100066532 3300006914 Bacteria 2491
37 Ga0097620_100002413 3300006931 Bacteria 19034
38 Ga0099794_10005331 3300007265 Bacteria 5145
39 Ga0105247_10000053 3300009101 Bacteria 141244
40 Ga0105248_10000275 3300009177 Bacteria 60509
41 Ga0105237_10007851 3300009545 Bacteria 11632
42 Ga0105249_10000125 3300009553 Bacteria 103728
43 Ga0163162_10267167 3300013306 Bacteria 1842
44 Ga0157379_10042452 3300014968 Bacteria 4060
45 Ga0213876_10002493 3300021384 Bacteria 10799
46 Ga0207710_10000078 3300025900 Bacteria 141062
47 Ga0207684_10000798 3300025910 Bacteria 36416
48 Ga0207684_10002784 3300025910 Bacteria 17391
49 Ga0207684_10043540 3300025910 Bacteria 3806
50 Ga0207671_10005556 3300025914 Bacteria 11582
51 Ga0207646_10000987 3300025922 Bacteria 36541
52 Ga0207681_10001300 3300025923 Bacteria 16118
53 Ga0207711_10000456 3300025941 Bacteria 42657
54 Ga0207712_10000028 3300025961 Bacteria 250190
55 Ga0207668_10001110 3300025972 Bacteria 16019
56 Ga0207658_10000679 3300025986 Bacteria 29645
57 Ga0207703_10017965 3300026035 Bacteria 5523
58 Ga0207641_10003363 3300026088 Bacteria 14211
59 Ga0209588_1015004 3300027671 Bacteria 2379
60 Ga0268266_10010849 3300028379 Bacteria 7935
61 Ga0268265_10000023 3300028380 Bacteria 268530
62 Ga0268264_10000099 3300028381 Bacteria 228666
63 Ga0265340_10001000 3300031247 Bacteria 16141
64 Ga0307513_10001034 3300031456 Bacteria 40352
65 Ga0307413_10015892 3300031824 Bacteria 3871
66 Ga0373934_0000375 3300035086 Bacteria 15636
67 Ga0395899_0013248 3300037312 Bacteria 6310
68 Ga0436364_0149565 3300037853 Bacteria 12057
69 Ga0436364_1478425 3300037853 Bacteria 1709
70 Ga0436365_0299076 3300039437 Bacteria 30939
71 Ga0436365_0546930 3300039437 Bacteria 18880
72 Ga0436365_1061792 3300039437 Bacteria 46945
73 Ga0450888_005541 3300042126 Bacteria 1350
74 Ga0466966_0019921 3300044684 Bacteria 4412
75 Ga0466961_0021244 3300044693 Bacteria 4179
76 Ga0466963_0016733 3300044694 Bacteria 4563
77 Ga0466963_0153860 3300044694 Bacteria 1598
78 Ga0466968_0000462 3300044735 Bacteria 13702
79 Ga0466968_0026003 3300044735 Bacteria 2400
80 Ga0466957_0014853 3300044842 Bacteria 4540
81 Ga0466960_0000254 3300044901 Bacteria 18334
82 Ga0466960_0125153 3300044901 Bacteria 1350
83 Ga0466959_0000771 3300045049 Bacteria 18752
84 Ga0466959_0005132 3300045049 Bacteria 8919
85 Ga0466958_0072683 3300045836 Bacteria 2106
86 Ga0466967_0006294 3300045976 Bacteria 8375
87 Ga0466967_0007118 3300045976 Bacteria 8027
88 Ga0495638_0008852 3300046460 Bacteria 7104
89 Ga0495583_0027473 3300046506 Bacteria 2809
90 Ga0495611_0044541 3300046648 Bacteria 1985
91 Ga0495625_0043900 3300046660 Bacteria 3239
92 Ga0495676_0105482 3300047321 Bacteria 2078
93 Ga0495673_0000588 3300047469 Bacteria 36483
94 Ga0496100_0033222 3300048903 Bacteria 3227
95 Ga0496100_0042000 3300048903 Bacteria 2918
96 Ga0496100_0137793 3300048903 Bacteria 1726
97 Ga0496101_0000002 3300048904 Bacteria 410971
98 Ga0496101_0004253 3300048904 Bacteria 8982
99 Ga0496101_0078423 3300048904 Bacteria 2436
100 Ga0496102_0000009 3300048905 Bacteria 344149
101 Ga0496102_0004377 3300048905 Bacteria 11928
102 Ga0496102_0092622 3300048905 Bacteria 2799
103 Ga0496103_0000005 3300048906 Bacteria 505416
104 Ga0496103_0000341 3300048906 Bacteria 42518
105 Ga0496106_0020609 3300048909 Bacteria 4895
106 Ga0496113_0091792 3300048916 Bacteria 2341
107 Ga0496116_0000104 3300048919 Bacteria 193416
108 Ga0496116_0009583 3300048919 Bacteria 8242
109 Ga0496117_0000019 3300048920 Bacteria 469256
110 Ga0496117_0006001 3300048920 Bacteria 12506
111 Ga0496118_0000020 3300048921 Bacteria 470521
112 Ga0496118_0001467 3300048921 Bacteria 35366
113 Ga0496118_0002636 3300048921 Bacteria 23787
114 Ga0496119_0009760 3300048922 Bacteria 8169
115 Ga0496119_0023010 3300048922 Bacteria 4436
116 Ga0496120_0033033 3300048923 Bacteria 3112
117 Ga0496121_0000064 3300048924 Bacteria 272488
118 Ga0496121_0013545 3300048924 Bacteria 8746
119 Ga0496123_0032284 3300048926 Bacteria 3794
120 Ga0496124_0070962 3300048927 Bacteria 2888
121 Ga0496126_0000509 3300048929 Bacteria 76308
122 Ga0496126_0003149 3300048929 Bacteria 21263
123 Ga0496126_0007273 3300048929 Bacteria 12173
124 Ga0496126_0042121 3300048929 Bacteria 4219
125 Ga0501032_0015837 3300049569 Bacteria 5315
126 Ga0501034_0015715 3300049571 Bacteria 7773
127 Ga0501034_0058738 3300049571 Bacteria 3864
128 Ga0501036_0002284 3300049572 Bacteria 14991
129 Ga0501037_0006455 3300049573 Bacteria 8577
130 Ga0501037_0076333 3300049573 Bacteria 2433
131 Ga0501038_0000728 3300049574 Bacteria 29397
132 Ga0501042_0002235 3300049578 Bacteria 11818
133 Ga0501043_0000515 3300049579 Bacteria 34803
134 Ga0501046_0004900 3300049580 Bacteria 12047
135 Ga0501047_0000651 3300049581 Bacteria 36362
136 Ga0501047_0246784 3300049581 Bacteria 1634
137 Ga0501047_0282576 3300049581 Bacteria 1504
138 Ga0501048_0000069 3300049582 Bacteria 52868
139 Ga0501048_0028138 3300049582 Bacteria 4081
140 Ga0501070_0002228 3300049586 Bacteria 17032
141 Ga0501070_0105814 3300049586 Bacteria 2326
142 Ga0501073_0154350 3300049589 Bacteria 1591
143 Ga0501074_0000667 3300049590 Bacteria 21406
144 Ga0501035_0015774 3300049822 Bacteria 6974
145 Ga0501044_0046143 3300049823 Bacteria 4512
146 nmdc:mga0yw44_108414_c1 3300050492 Bacteria 1777
147 nmdc:mga06r32_147093_c1 3300050510 Bacteria 2333
148 nmdc:mga0n895_231695_c1 3300050512 Bacteria 1874
149 nmdc:mga0sz30_10832_c1 3300050516 Bacteria 3504
150 Ga0495612_0038706 3300053078 Bacteria 1938
151 Ga0500556_0053715 3300053104 Bacteria 1465
152 Ga0500616_0000561 3300053153 Bacteria 45791
153 Ga0500616_0004538 3300053153 Bacteria 9841
154 Ga0500645_000023 3300053730 Bacteria 128995

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005445 Ga0070708_100000970 Ga0070708_10000097021 316
2 3300007265 Ga0099794_10005331 Ga0099794_100053314 316
3 3300027671 Ga0209588_1015004 Ga0209588_10150042 319
4 3300044901 Ga0466960_0125153 Ga0466960_0125153_284_1336 348
5 3300042126 Ga0450888_005541 Ga0450888_005541_28_1086 350
6 3300053078 Ga0495612_0038706 Ga0495612_0038706_255_1613 388
7 iso_pu_bacteria 2738541274 2738702375 388
8 iso_pu_bacteria 2738543028 2739331630 388
9 iso_pu_bacteria 2902799365 2902802654 388
10 3300006186 Ga0075369_10005942 Ga0075369_100059423 392
11 3300050492 nmdc:mga0yw44_108414_c1 nmdc:mga0yw44_108414_c1_549_1745 392
12 iso_pu_bacteria 2895427314 2895436009 394
13 iso_pu_bacteria 2675903060 2676491037 395
14 3300053730 Ga0500645_000023 Ga0500645_000023_20381_21589 396
15 iso_pu_bacteria 2675903059 2676485686 396
16 iso_pu_bacteria 2884693830 2884701009 396
17 iso_pu_bacteria 2895442618 2895452273 396
18 3300044694 Ga0466963_0016733 Ga0466963_0016733_483_1778 399
19 3300031247 Ga0265340_10001000 Ga0265340_1000100013 401
20 3300037853 Ga0436364_1478425 Ga0436364_1478425_384_1625 401
21 3300053104 Ga0500556_0053715 Ga0500556_0053715_14_1228 401
22 3300005445 Ga0070708_100008401 Ga0070708_1000084017 402
23 3300005467 Ga0070706_100008081 Ga0070706_1000080816 402
24 3300005468 Ga0070707_100007398 Ga0070707_1000073986 402
25 3300005471 Ga0070698_100001318 Ga0070698_10000131825 402
26 3300005937 Ga0081455_10020483 Ga0081455_100204833 402
27 3300025910 Ga0207684_10000798 Ga0207684_100007982 402
28 3300025922 Ga0207646_10000987 Ga0207646_100009872 402
29 3300031456 Ga0307513_10001034 Ga0307513_1000103416 402
30 iso_pu_bacteria 2515154155 2515851507 402
31 iso_pu_bacteria 2643221687 2644490498 402
32 iso_pu_bacteria 2734482000 2734972628 402
33 3300005539 Ga0068853_100038059 Ga0068853_1000380593 403
34 3300006048 Ga0075363_100014209 Ga0075363_1000142094 403
35 3300006177 Ga0075362_10006968 Ga0075362_100069682 403
36 3300006186 Ga0075369_10005596 Ga0075369_100055964 403
37 3300021384 Ga0213876_10002493 Ga0213876_100024933 403
38 3300037312 Ga0395899_0013248 Ga0395899_0013248_3872_5110 403
39 3300037853 Ga0436364_0149565 Ga0436364_0149565_1434_2675 403
40 3300039437 Ga0436365_1061792 Ga0436365_1061792_10304_11545 403
41 3300049571 Ga0501034_0015715 Ga0501034_0015715_6544_7758 403
42 3300049572 Ga0501036_0002284 Ga0501036_0002284_8312_9526 403
43 3300049573 Ga0501037_0006455 Ga0501037_0006455_2936_4150 403
44 3300049574 Ga0501038_0000728 Ga0501038_0000728_20472_21686 403
45 3300049578 Ga0501042_0002235 Ga0501042_0002235_1223_2437 403
46 3300049579 Ga0501043_0000515 Ga0501043_0000515_2762_3976 403
47 3300049581 Ga0501047_0000651 Ga0501047_0000651_34332_35546 403
48 3300049582 Ga0501048_0000069 Ga0501048_0000069_969_2183 403
49 3300049589 Ga0501073_0154350 Ga0501073_0154350_253_1467 403
50 3300049590 Ga0501074_0000667 Ga0501074_0000667_211_1425 403
51 3300053153 Ga0500616_0000561 Ga0500616_0000561_40539_41777 403
52 iso_pu_bacteria 2902792274 2902794085 403
53 3300005467 Ga0070706_100015700 Ga0070706_1000157003 404
54 3300025910 Ga0207684_10043540 Ga0207684_100435401 404
55 3300044684 Ga0466966_0019921 Ga0466966_0019921_1126_2358 404
56 3300044693 Ga0466961_0021244 Ga0466961_0021244_1065_2297 404
57 3300044694 Ga0466963_0153860 Ga0466963_0153860_17_1249 404
58 3300044735 Ga0466968_0026003 Ga0466968_0026003_1086_2318 404
59 3300044842 Ga0466957_0014853 Ga0466957_0014853_1557_2789 404
60 3300045049 Ga0466959_0005132 Ga0466959_0005132_5620_6852 404
61 3300049571 Ga0501034_0058738 Ga0501034_0058738_964_2208 404
62 3300049580 Ga0501046_0004900 Ga0501046_0004900_3320_4564 404
63 3300049581 Ga0501047_0246784 Ga0501047_0246784_183_1427 404
64 3300049581 Ga0501047_0282576 Ga0501047_0282576_152_1384 404
65 3300049822 Ga0501035_0015774 Ga0501035_0015774_4630_5874 404
66 3300049823 Ga0501044_0046143 Ga0501044_0046143_717_1961 404
67 3300005467 Ga0070706_100002099 Ga0070706_1000020995 405
68 3300005467 Ga0070706_100155868 Ga0070706_1001558682 405
69 3300025910 Ga0207684_10002784 Ga0207684_100027845 405
70 3300031824 Ga0307413_10015892 Ga0307413_100158922 405
71 iso_pu_bacteria 2643221575 2643888230 405
72 iso_pu_bacteria 2904509784 2904510281 405
73 iso_pu_bacteria 2977236895 2977239200 405
74 iso_pu_bacteria 2977251589 2977253280 405
75 iso_pu_bacteria 2984542743 2984543016 405
76 3300006038 Ga0075365_10010307 Ga0075365_100103073 406
77 3300044735 Ga0466968_0000462 Ga0466968_0000462_213_1439 406
78 3300044901 Ga0466960_0000254 Ga0466960_0000254_9463_10689 406
79 3300045049 Ga0466959_0000771 Ga0466959_0000771_7293_8519 406
80 3300045836 Ga0466958_0072683 Ga0466958_0072683_688_1914 406
81 3300045976 Ga0466967_0006294 Ga0466967_0006294_3657_4883 406
82 3300048929 Ga0496126_0003149 Ga0496126_0003149_4780_6045 406
83 3300005334 Ga0068869_100039589 Ga0068869_1000395893 407
84 3300005347 Ga0070668_100004518 Ga0070668_1000045186 407
85 3300005353 Ga0070669_100002332 Ga0070669_1000023328 407
86 3300005367 Ga0070667_100000782 Ga0070667_10000078227 407
87 3300005406 Ga0070703_10000021 Ga0070703_1000002124 407
88 3300005434 Ga0070709_10040514 Ga0070709_100405143 407
89 3300005445 Ga0070708_100031190 Ga0070708_1000311903 407
90 3300005468 Ga0070707_100040698 Ga0070707_1000406983 407
91 3300005548 Ga0070665_100013523 Ga0070665_10001352310 407
92 3300005617 Ga0068859_100002413 Ga0068859_1000024138 407
93 3300005841 Ga0068863_100041458 Ga0068863_1000414584 407
94 3300005842 Ga0068858_100005510 Ga0068858_1000055103 407
95 3300005843 Ga0068860_100000021 Ga0068860_1000000218 407
96 3300005844 Ga0068862_100000015 Ga0068862_1000000159 407
97 3300006931 Ga0097620_100002413 Ga0097620_1000024138 407
98 3300009101 Ga0105247_10000053 Ga0105247_100000538 407
99 3300009177 Ga0105248_10000275 Ga0105248_100002752 407
100 3300009545 Ga0105237_10007851 Ga0105237_100078515 407
101 3300009553 Ga0105249_10000125 Ga0105249_1000012571 407
102 3300013306 Ga0163162_10267167 Ga0163162_102671672 407
103 3300014968 Ga0157379_10042452 Ga0157379_100424522 407
104 3300025900 Ga0207710_10000078 Ga0207710_100000788 407
105 3300025914 Ga0207671_10005556 Ga0207671_1000555610 407
106 3300025923 Ga0207681_10001300 Ga0207681_100013009 407
107 3300025941 Ga0207711_10000456 Ga0207711_100004562 407
108 3300025961 Ga0207712_10000028 Ga0207712_10000028207 407
109 3300025972 Ga0207668_10001110 Ga0207668_1000111015 407
110 3300025986 Ga0207658_10000679 Ga0207658_100006794 407
111 3300026035 Ga0207703_10017965 Ga0207703_100179653 407
112 3300026088 Ga0207641_10003363 Ga0207641_100033637 407
113 3300028379 Ga0268266_10010849 Ga0268266_100108492 407
114 3300028380 Ga0268265_10000023 Ga0268265_100000239 407
115 3300028381 Ga0268264_10000099 Ga0268264_100000998 407
116 3300035086 Ga0373934_0000375 Ga0373934_0000375_2682_4025 407
117 3300039437 Ga0436365_0299076 Ga0436365_0299076_7343_8584 407
118 3300045976 Ga0466967_0007118 Ga0466967_0007118_3328_4581 407
119 3300046460 Ga0495638_0008852 Ga0495638_0008852_4429_5661 407
120 3300046506 Ga0495583_0027473 Ga0495583_0027473_1456_2694 407
121 3300046648 Ga0495611_0044541 Ga0495611_0044541_723_1961 407
122 3300046660 Ga0495625_0043900 Ga0495625_0043900_598_1830 407
123 3300047321 Ga0495676_0105482 Ga0495676_0105482_352_1713 407
124 3300047469 Ga0495673_0000588 Ga0495673_0000588_3327_4565 407
125 3300048903 Ga0496100_0033222 Ga0496100_0033222_1839_3083 407
126 3300048903 Ga0496100_0042000 Ga0496100_0042000_912_2162 407
127 3300048903 Ga0496100_0137793 Ga0496100_0137793_14_1243 407
128 3300048904 Ga0496101_0000002 Ga0496101_0000002_148893_150143 407
129 3300048904 Ga0496101_0004253 Ga0496101_0004253_6434_7678 407
130 3300048904 Ga0496101_0078423 Ga0496101_0078423_1185_2414 407
131 3300048905 Ga0496102_0000009 Ga0496102_0000009_218673_219923 407
132 3300048905 Ga0496102_0004377 Ga0496102_0004377_1144_2394 407
133 3300048906 Ga0496103_0000005 Ga0496103_0000005_379940_381190 407
134 3300048906 Ga0496103_0000341 Ga0496103_0000341_9854_11098 407
135 3300048909 Ga0496106_0020609 Ga0496106_0020609_3044_4294 407
136 3300048916 Ga0496113_0091792 Ga0496113_0091792_751_1980 407
137 3300048919 Ga0496116_0000104 Ga0496116_0000104_124388_125638 407
138 3300048919 Ga0496116_0009583 Ga0496116_0009583_5155_6399 407
139 3300048920 Ga0496117_0000019 Ga0496117_0000019_249334_250584 407
140 3300048920 Ga0496117_0006001 Ga0496117_0006001_3463_4707 407
141 3300048921 Ga0496118_0000020 Ga0496118_0000020_218673_219923 407
142 3300048921 Ga0496118_0001467 Ga0496118_0001467_23812_25056 407
143 3300048922 Ga0496119_0009760 Ga0496119_0009760_3370_4614 407
144 3300048922 Ga0496119_0023010 Ga0496119_0023010_2983_4233 407
145 3300048923 Ga0496120_0033033 Ga0496120_0033033_1797_3047 407
146 3300048924 Ga0496121_0000064 Ga0496121_0000064_20508_21758 407
147 3300048924 Ga0496121_0013545 Ga0496121_0013545_3347_4591 407
148 3300048926 Ga0496123_0032284 Ga0496123_0032284_15_1244 407
149 3300048927 Ga0496124_0070962 Ga0496124_0070962_857_2101 407
150 3300048929 Ga0496126_0000509 Ga0496126_0000509_57597_58847 407
151 3300048929 Ga0496126_0007273 Ga0496126_0007273_8046_9290 407
152 3300048929 Ga0496126_0042121 Ga0496126_0042121_46_1275 407
153 3300049569 Ga0501032_0015837 Ga0501032_0015837_3783_5048 407
154 3300049573 Ga0501037_0076333 Ga0501037_0076333_1048_2301 407
155 3300049582 Ga0501048_0028138 Ga0501048_0028138_2725_3990 407
156 3300049586 Ga0501070_0002228 Ga0501070_0002228_7685_8938 407
157 3300049586 Ga0501070_0105814 Ga0501070_0105814_951_2309 407
158 3300050516 nmdc:mga0sz30_10832_c1 nmdc:mga0sz30_10832_c1_2213_3451 407
159 3300053153 Ga0500616_0004538 Ga0500616_0004538_4654_5889 407
160 iso_pu_bacteria 2643221549 2643768392 407
161 iso_pu_bacteria 2902810491 2902816094 407
162 3300039437 Ga0436365_0546930 Ga0436365_0546930_9467_10729 408
163 3300048905 Ga0496102_0092622 Ga0496102_0092622_353_1603 408
164 3300048921 Ga0496118_0002636 Ga0496118_0002636_19328_20578 408
165 3300050510 nmdc:mga06r32_147093_c1 nmdc:mga06r32_147093_c1_840_2153 408
166 3300005440 Ga0070705_100132929 Ga0070705_1001329292 409
167 3300005549 Ga0070704_100220172 Ga0070704_1002201721 409
168 3300006914 Ga0075436_100066532 Ga0075436_1000665321 409
169 3300050512 nmdc:mga0n895_231695_c1 nmdc:mga0n895_231695_c1_477_1805 409
170 3300005436 Ga0070713_100016582 Ga0070713_1000165822 410
171 3300005455 Ga0070663_100012654 Ga0070663_1000126544 410
172 3300005471 Ga0070698_100017593 Ga0070698_1000175937 410
173 3300003578 Ga0006562J51391_1144348 Ga0006562J51391_11443486 411

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21686

LigD_Prim-Pol

LigD, primase-polymerase domain

36

288

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
5dmu-assembly1.cif.gz_A structure of the nhej polymerase from methanocella paludicola 0.9438 4 295
2iry-assembly1.cif.gz_A crystal structure of the polymerase domain from mycobacterium tuberculosis ligase d with dgtp and manganese. 0.9297 18 289
6sa1-assembly1.cif.gz_A post catalytic complex of prim-polc from mycobacterium smegmatis with gapped dna and 3'-dutp 0.9171 7 327
5dmu-assembly1.cif.gz_A structure of the nhej polymerase from methanocella paludicola 0.9136 4 295
2far-assembly2.cif.gz_B crystal structure of pseudomonas aeruginosa ligd polymerase domain with datp and manganese 0.9067 18 306
ID Description Score Start End Superfamily
af_P95226_24_305_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9858 26 302 3.90.920.10
af_O69697_22_304_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9748 26 302 3.90.920.10
af_P95226_24_305_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.965 26 302 3.90.920.10
af_O69697_22_304_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9512 26 302 3.90.920.10
2iruB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9246 134 267 3.30.70.3300
ID Description Score Start End GO Terms
AF-X7ZAV1-F1-model_v4 DNA ligase D polymerase domain-containing protein 0.9955 8 117
AF-A0A1U0ZWK3-F1-model_v4 deleted 0.9953 326 404
AF-A0A536HYM9-F1-model_v4 DNA polymerase domain-containing protein 0.9898 6 292
AF-A0A2S8MCV2-F1-model_v4 deleted 0.9895 20 271
AF-A0A535G9L7-F1-model_v4 DNA primase 0.987 4 210

Feature Viewer

pLDDT pTM Quality
91.98 0.89 High
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Predicted Structure (AlphaFold2)

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