F263489

General Info

Members Datasets Scaffolds Average Seq Length
173 99 160 340

Family's Representative Sequence

Representative Sequence 3300053125|Ga0500618_023381|Ga0500618_023381_301_1272
Length 323
Sequence MRYRYIFYLALTLLMAGATAQQAPSVTVSATRDPVDKSYRNMLAGMDLFERRHALAPQATLRFQLLPRLPDTQLDGIALRVAGDNVSLPVQVGSDHTFTLPRNADAAREDAALIASRKTSTLTWRADVRSPGVPAGMRRLGDLRLECLVGVEAGLLSNNTQWFTSPERVCGTPDGNYLFFAERPVFAITLQDGERRATLPFNALYAGGTQTPATLPYCDCQVLLDRSYYAPLWDRSWSDDTLLSFDDMDGPPGSDDTSVNAGHASSVQMLSRLGPAQVVSFDSGYQMWRYTYPAIRKSEQPAEFTILFGPDGMARKARLREPE

Samples

Sample ID Description Type Environment
1 2738541297 Duganella sp. GV083 Isolate Unclassified
2 2738541357 Duganella sp. GV053 Isolate Unclassified
3 2738543003 Duganella sp. GV066 Isolate Unclassified
4 2738543026 Duganella sp. GV089 Isolate Unclassified
5 2738543029 Duganella sp. GV039 Isolate Unclassified
6 2821131069 Duganella sp. 1224 Isolate Unclassified
7 2842711865 Duganella sp. R-73148 Isolate Unclassified
8 2857553236 Duganella sp. R-74557 Isolate Unclassified
9 2857558681 Duganella sp. R-74565 Isolate Unclassified
10 2857564685 Duganella sp. R-74599 Isolate Unclassified
11 2904424332 Duganella sp. 1411 Isolate Rhizosphere
12 2919476304 Duganella sp. 3397 Isolate Unclassified
13 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
16 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
17 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
23 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
24 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
25 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
26 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
27 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
29 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
30 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
33 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
34 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
35 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
36 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
37 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
38 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
39 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
40 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
41 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
42 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
43 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
44 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
45 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
46 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
47 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
48 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
49 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
50 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
51 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
52 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
53 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
54 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
55 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
56 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
57 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
58 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
59 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
60 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
61 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
62 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
63 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
64 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
65 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
66 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
67 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
68 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
69 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
70 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
71 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
72 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
73 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
74 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
75 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
76 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
77 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
78 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
79 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
80 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
81 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
82 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
83 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
84 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
85 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
86 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
87 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
88 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
89 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
90 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
91 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
92 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
93 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
94 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
95 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
96 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
97 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
98 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
99 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.06
Metatranscriptomes 0
Isolates 6.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.78
Nodule 0
Rhizoplane 0.58
Rhizosphere 81.5
Stem 0
Stem Tuber 0
Unclassified 12.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1001576 3300002738 Bacteria 7817
2 rootL2_10051616 3300003322 Bacteria 3743
3 rootL2_10086965 3300003322 Bacteria 3891
4 Ga0055529_1000152 3300003763 Bacteria 98133
5 Ga0055526_1000079 3300003771 Bacteria 89698
6 Ga0055524_1000440 3300003775 Bacteria 34681
7 Ga0070671_100339523 3300005355 Bacteria 1281
8 Ga0070678_100296227 3300005456 Bacteria 1373
9 Ga0075431_100001016 3300006847 Bacteria 24985
10 Ga0075429_100006866 3300006880 Bacteria 9880
11 Ga0105244_10000981 3300009036 Bacteria 23934
12 Ga0182006_1000080 3300015261 Bacteria 122163
13 Ga0182005_1000016 3300015265 Bacteria 346889
14 Ga0213872_10000005 3300021361 Bacteria 290165
15 Ga0213872_10000338 3300021361 Bacteria 39725
16 Ga0213872_10008765 3300021361 Bacteria 4881
17 Ga0209646_1000190 3300025246 Bacteria 75772
18 Ga0209455_1000070 3300025272 Bacteria 307867
19 Ga0209564_1000047 3300025295 Bacteria 368031
20 Ga0209256_1000054 3300025299 Bacteria 298431
21 Ga0207655_1004377 3300025728 Bacteria 10038
22 Ga0207644_10302188 3300025931 Bacteria 1290
23 Ga0307405_10296739 3300031731 Bacteria 1224
24 Ga0307413_10304589 3300031824 Bacteria 1210
25 Ga0307412_10045773 3300031911 Bacteria 2863
26 Ga0307416_100024309 3300032002 Bacteria 4419
27 Ga0307414_10280077 3300032004 Unclassified 1401
28 Ga0307411_10017566 3300032005 Bacteria 4082
29 Ga0307411_10151234 3300032005 Bacteria 1725
30 Ga0436361_0153820 3300039447 Bacteria 129660
31 Ga0436361_0166253 3300039447 Bacteria 25088
32 Ga0436361_0613307 3300039447 Bacteria 31394
33 Ga0436361_1185475 3300039447 Bacteria 19521
34 Ga0466965_0018728 3300044683 Bacteria 3322
35 Ga0466968_0017114 3300044735 Bacteria 2893
36 Ga0495617_000075 3300046452 Bacteria 78250
37 Ga0495617_000346 3300046452 Bacteria 25591
38 Ga0495617_001460 3300046452 Bacteria 10367
39 Ga0495627_000011 3300046453 Bacteria 354522
40 Ga0495590_0000021 3300046457 Bacteria 210878
41 Ga0495590_0018967 3300046457 Bacteria 2455
42 Ga0495638_0000096 3300046460 Bacteria 141626
43 Ga0495638_0000861 3300046460 Bacteria 31550
44 Ga0495638_0120356 3300046460 Bacteria 1552
45 Ga0495653_0000044 3300046463 Bacteria 115591
46 Ga0495650_0000533 3300046471 Bacteria 55008
47 Ga0495650_0001068 3300046471 Bacteria 30381
48 Ga0495650_0032915 3300046471 Bacteria 2313
49 Ga0495650_0049792 3300046471 Bacteria 1737
50 Ga0495605_0000121 3300046474 Bacteria 102560
51 Ga0495639_0001942 3300046475 Bacteria 9170
52 Ga0495584_0000161 3300046491 Bacteria 47105
53 Ga0495585_0010578 3300046492 Bacteria 5486
54 Ga0495607_0003401 3300046501 Bacteria 12195
55 Ga0495607_0021218 3300046501 Bacteria 4089
56 Ga0495607_0034469 3300046501 Bacteria 3070
57 Ga0495607_0039859 3300046501 Bacteria 2802
58 Ga0495607_0060696 3300046501 Bacteria 2151
59 Ga0495583_0000150 3300046506 Bacteria 117772
60 Ga0495583_0000277 3300046506 Bacteria 82954
61 Ga0495606_0000080 3300046507 Bacteria 161866
62 Ga0495606_0000099 3300046507 Bacteria 150950
63 Ga0495606_0000208 3300046507 Bacteria 103578
64 Ga0495606_0002619 3300046507 Bacteria 20530
65 Ga0495606_0003936 3300046507 Bacteria 15279
66 Ga0495610_0000017 3300046512 Bacteria 365675
67 Ga0495610_0000833 3300046512 Bacteria 28846
68 Ga0495610_0006362 3300046512 Bacteria 8149
69 Ga0495610_0012123 3300046512 Bacteria 5212
70 Ga0495610_0031827 3300046512 Bacteria 2747
71 Ga0495610_0047500 3300046512 Bacteria 2111
72 Ga0495610_0066113 3300046512 Bacteria 1704
73 Ga0495637_0000047 3300046520 Bacteria 106648
74 Ga0495637_0003243 3300046520 Bacteria 8680
75 Ga0495643_0000142 3300046522 Bacteria 115533
76 Ga0495643_0000209 3300046522 Bacteria 89487
77 Ga0495644_0000652 3300046523 Bacteria 14531
78 Ga0495644_0001201 3300046523 Bacteria 10607
79 Ga0495644_0076196 3300046523 Bacteria 1263
80 Ga0495648_0000017 3300046524 Bacteria 283100
81 Ga0495648_0002048 3300046524 Bacteria 19126
82 Ga0495648_0003775 3300046524 Bacteria 13174
83 Ga0495648_0007998 3300046524 Bacteria 8385
84 Ga0495642_0000854 3300046528 Bacteria 14487
85 Ga0495654_0000030 3300046530 Bacteria 216715
86 Ga0495654_0003673 3300046530 Bacteria 9313
87 Ga0495609_0000235 3300046538 Bacteria 52774
88 Ga0495609_0002059 3300046538 Bacteria 12665
89 Ga0495597_0000017 3300046542 Bacteria 165491
90 Ga0495597_0000257 3300046542 Bacteria 48447
91 Ga0495622_0000044 3300046557 Bacteria 115528
92 Ga0495622_0000058 3300046557 Bacteria 97458
93 Ga0495633_0000070 3300046558 Bacteria 133333
94 Ga0495633_0000394 3300046558 Bacteria 45904
95 Ga0495633_0001464 3300046558 Bacteria 18313
96 Ga0495633_0003976 3300046558 Bacteria 9593
97 Ga0495633_0005022 3300046558 Bacteria 8245
98 Ga0495633_0008585 3300046558 Bacteria 5740
99 Ga0495656_0014026 3300046615 Bacteria 2996
100 Ga0495668_0000035 3300046616 Bacteria 240241
101 Ga0495668_0000143 3300046616 Bacteria 107442
102 Ga0495668_0000647 3300046616 Bacteria 41830
103 Ga0495611_0001753 3300046648 Bacteria 10498
104 Ga0495611_0047183 3300046648 Bacteria 1932
105 Ga0495625_0000556 3300046660 Bacteria 54663
106 Ga0495625_0003515 3300046660 Bacteria 15526
107 Ga0495625_0010587 3300046660 Bacteria 7615
108 Ga0495625_0023696 3300046660 Bacteria 4684
109 Ga0495659_0010348 3300046664 Bacteria 2989
110 Ga0495661_0037536 3300046665 Bacteria 3024
111 Ga0495670_0002547 3300046691 Bacteria 9008
112 Ga0495670_0058514 3300046691 Bacteria 1934
113 Ga0495670_0154254 3300046691 Bacteria 1205
114 Ga0495671_0000026 3300046692 Bacteria 237110
115 Ga0495671_0006471 3300046692 Bacteria 6767
116 Ga0495671_0028528 3300046692 Bacteria 2873
117 Ga0495649_0006345 3300046694 Bacteria 7360
118 Ga0495589_0030032 3300046794 Bacteria 2739
119 Ga0495660_0000482 3300046810 Bacteria 33177
120 Ga0495660_0000538 3300046810 Bacteria 31032
121 Ga0495660_0000631 3300046810 Bacteria 27411
122 Ga0495660_0001587 3300046810 Bacteria 15260
123 Ga0495636_0000553 3300047318 Bacteria 13713
124 Ga0495672_0000245 3300047320 Bacteria 76419
125 Ga0495672_0002728 3300047320 Bacteria 15835
126 Ga0495672_0021168 3300047320 Bacteria 4245
127 Ga0495683_0000790 3300047323 Bacteria 22534
128 Ga0495683_0026873 3300047323 Bacteria 2945
129 Ga0495687_000057 3300047443 Bacteria 186224
130 Ga0495687_004641 3300047443 Bacteria 9168
131 Ga0495677_0014500 3300047445 Bacteria 2869
132 Ga0495685_000607 3300047447 Bacteria 10999
133 Ga0495673_0000069 3300047469 Bacteria 218170
134 Ga0495673_0000080 3300047469 Bacteria 201831
135 Ga0495673_0000203 3300047469 Bacteria 89918
136 Ga0495673_0009767 3300047469 Bacteria 5277
137 Ga0495681_0005768 3300047470 Bacteria 8234
138 Ga0495681_0102952 3300047470 Bacteria 1246
139 Ga0495686_0002230 3300047472 Bacteria 18762
140 Ga0495686_0037786 3300047472 Bacteria 3091
141 Ga0496103_0001815 3300048906 Bacteria 13893
142 Ga0496116_0034483 3300048919 Bacteria 3570
143 Ga0496121_0151867 3300048924 Bacteria 1703
144 Ga0496122_0187446 3300048925 Bacteria 1225
145 Ga0496123_0003741 3300048926 Bacteria 16678
146 Ga0496124_0041355 3300048927 Bacteria 3978
147 Ga0496126_0002547 3300048929 Bacteria 24391
148 Ga0495678_000010 3300049459 Bacteria 357896
149 Ga0495678_000200 3300049459 Bacteria 70334
150 Ga0495678_005056 3300049459 Bacteria 7415
151 Ga0495682_0000089 3300049460 Bacteria 80020
152 Ga0495682_0001611 3300049460 Bacteria 11641
153 Ga0495682_0030878 3300049460 Bacteria 1981
154 Ga0501249_034579 3300049679 Bacteria 1134
155 Ga0501269_000043 3300049766 Bacteria 38904
156 nmdc:mga06r32_827_c1 3300050510 Bacteria 27437
157 Ga0500594_0064308 3300053118 Bacteria 1065
158 Ga0500618_001070 3300053125 Bacteria 13517
159 Ga0500618_023381 3300053125 Bacteria 1497
160 Ga0500586_000020 3300053145 Bacteria 30971

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031731 Ga0307405_10296739 Ga0307405_102967392 270
2 3300031824 Ga0307413_10304589 Ga0307413_103045891 270
3 3300031911 Ga0307412_10045773 Ga0307412_100457733 270
4 3300032002 Ga0307416_100024309 Ga0307416_1000243092 271
5 3300032005 Ga0307411_10017566 Ga0307411_100175664 271
6 3300006847 Ga0075431_100001016 Ga0075431_10000101620 273
7 3300006880 Ga0075429_100006866 Ga0075429_1000068664 273
8 3300050510 nmdc:mga06r32_827_c1 nmdc:mga06r32_827_c1_16830_17720 273
9 3300032004 Ga0307414_10280077 Ga0307414_102800772 275
10 3300032005 Ga0307411_10151234 Ga0307411_101512342 275
11 3300046512 Ga0495610_0031827 Ga0495610_0031827_1850_2722 287
12 3300053118 Ga0500594_0064308 Ga0500594_0064308_186_1052 287
13 3300047470 Ga0495681_0102952 Ga0495681_0102952_346_1236 293
14 3300039447 Ga0436361_0153820 Ga0436361_0153820_114682_115593 303
15 3300046691 Ga0495670_0154254 Ga0495670_0154254_275_1189 303
16 3300047470 Ga0495681_0005768 Ga0495681_0005768_749_1750 308
17 3300046794 Ga0495589_0030032 Ga0495589_0030032_733_2034 310
18 3300039447 Ga0436361_0166253 Ga0436361_0166253_17867_18853 311
19 3300039447 Ga0436361_1185475 Ga0436361_1185475_14331_15332 311
20 3300046453 Ga0495627_000011 Ga0495627_000011_61674_62702 313
21 3300046523 Ga0495644_0076196 Ga0495644_0076196_219_1247 313
22 3300021361 Ga0213872_10008765 Ga0213872_100087652 314
23 3300046558 Ga0495633_0000070 Ga0495633_0000070_27656_28738 314
24 3300046810 Ga0495660_0000482 Ga0495660_0000482_19047_20078 314
25 3300047472 Ga0495686_0037786 Ga0495686_0037786_1723_2754 314
26 3300046471 Ga0495650_0049792 Ga0495650_0049792_466_1464 315
27 3300046520 Ga0495637_0000047 Ga0495637_0000047_12559_13557 315
28 3300046530 Ga0495654_0000030 Ga0495654_0000030_59792_60790 315
29 3300025931 Ga0207644_10302188 Ga0207644_103021882 316
30 3300003775 Ga0055524_1000440 Ga0055524_10004405 317
31 3300015261 Ga0182006_1000080 Ga0182006_100008060 317
32 3300015265 Ga0182005_1000016 Ga0182005_100001659 317
33 3300025299 Ga0209256_1000054 Ga0209256_100005447 317
34 3300044735 Ga0466968_0017114 Ga0466968_0017114_1326_2375 317
35 3300044683 Ga0466965_0018728 Ga0466965_0018728_578_1636 318
36 3300046501 Ga0495607_0003401 Ga0495607_0003401_6539_7546 318
37 3300046507 Ga0495606_0002619 Ga0495606_0002619_665_1672 318
38 3300046810 Ga0495660_0000631 Ga0495660_0000631_14424_15458 318
39 3300005355 Ga0070671_100339523 Ga0070671_1003395231 319
40 3300021361 Ga0213872_10000338 Ga0213872_100003386 319
41 3300039447 Ga0436361_0613307 Ga0436361_0613307_9129_10118 319
42 3300005456 Ga0070678_100296227 Ga0070678_1002962272 320
43 3300048919 Ga0496116_0034483 Ga0496116_0034483_2377_3405 320
44 3300053125 Ga0500618_023381 Ga0500618_023381_301_1272 321
45 3300021361 Ga0213872_10000005 Ga0213872_10000005256 323
46 3300049459 Ga0495678_000010 Ga0495678_000010_72910_73950 323
47 iso_pu_bacteria 2857564685 2857568241 323
48 3300046557 Ga0495622_0000044 Ga0495622_0000044_88193_89179 324
49 iso_pu_bacteria 2738541297 2738827025 324
50 iso_pu_bacteria 2738541357 2739150822 324
51 iso_pu_bacteria 2738543003 2739192741 324
52 iso_pu_bacteria 2738543026 2739319218 324
53 iso_pu_bacteria 2738543029 2739337459 324
54 iso_pu_bacteria 2821131069 2821136443 324
55 3300025728 Ga0207655_1004377 Ga0207655_10043776 325
56 3300046452 Ga0495617_001460 Ga0495617_001460_7637_8635 325
57 3300046460 Ga0495638_0120356 Ga0495638_0120356_390_1382 325
58 3300046507 Ga0495606_0000208 Ga0495606_0000208_22604_23599 325
59 3300046507 Ga0495606_0003936 Ga0495606_0003936_13784_14782 325
60 3300046512 Ga0495610_0000833 Ga0495610_0000833_14436_15428 325
61 3300046512 Ga0495610_0006362 Ga0495610_0006362_1425_2423 325
62 3300046520 Ga0495637_0003243 Ga0495637_0003243_3631_4623 325
63 3300046558 Ga0495633_0001464 Ga0495633_0001464_930_1925 325
64 3300048906 Ga0496103_0001815 Ga0496103_0001815_3555_4574 325
65 3300053145 Ga0500586_000020 Ga0500586_000020_11744_12739 325
66 iso_pu_bacteria 2842711865 2842712120 325
67 iso_pu_bacteria 2857558681 2857559656 325
68 3300003322 rootL2_10051616 rootL2_100516162 326
69 3300003763 Ga0055529_1000152 Ga0055529_100015253 326
70 3300025272 Ga0209455_1000070 Ga0209455_100007056 326
71 3300046558 Ga0495633_0005022 Ga0495633_0005022_5775_6815 326
72 3300053125 Ga0500618_001070 Ga0500618_001070_6740_7729 326
73 iso_pu_bacteria 2919476304 2919477177 326
74 3300046452 Ga0495617_000075 Ga0495617_000075_43447_44457 327
75 3300046463 Ga0495653_0000044 Ga0495653_0000044_47313_48341 327
76 3300046471 Ga0495650_0001068 Ga0495650_0001068_6923_7933 327
77 3300046471 Ga0495650_0032915 Ga0495650_0032915_538_1548 327
78 3300046507 Ga0495606_0000099 Ga0495606_0000099_47562_48590 327
79 3300046512 Ga0495610_0000017 Ga0495610_0000017_49430_50440 327
80 3300046524 Ga0495648_0003775 Ga0495648_0003775_7201_8211 327
81 3300046524 Ga0495648_0007998 Ga0495648_0007998_1211_2221 327
82 3300046530 Ga0495654_0003673 Ga0495654_0003673_5800_6810 327
83 3300046616 Ga0495668_0000035 Ga0495668_0000035_155467_156474 327
84 3300046616 Ga0495668_0000647 Ga0495668_0000647_23627_24637 327
85 3300046660 Ga0495625_0003515 Ga0495625_0003515_268_1272 327
86 3300046665 Ga0495661_0037536 Ga0495661_0037536_181_1191 327
87 3300046692 Ga0495671_0000026 Ga0495671_0000026_197313_198323 327
88 3300046692 Ga0495671_0006471 Ga0495671_0006471_250_1260 327
89 3300047469 Ga0495673_0000069 Ga0495673_0000069_168741_169751 327
90 3300047469 Ga0495673_0000203 Ga0495673_0000203_42618_43610 327
91 3300047472 Ga0495686_0002230 Ga0495686_0002230_14272_15279 327
92 3300048924 Ga0496121_0151867 Ga0496121_0151867_132_1142 327
93 3300048925 Ga0496122_0187446 Ga0496122_0187446_39_1049 327
94 3300048926 Ga0496123_0003741 Ga0496123_0003741_7049_8059 327
95 3300048929 Ga0496126_0002547 Ga0496126_0002547_21979_22971 327
96 3300046460 Ga0495638_0000096 Ga0495638_0000096_25641_26648 328
97 3300046471 Ga0495650_0000533 Ga0495650_0000533_3267_4274 328
98 3300046475 Ga0495639_0001942 Ga0495639_0001942_1869_2876 328
99 3300046506 Ga0495583_0000277 Ga0495583_0000277_25245_26252 328
100 3300046522 Ga0495643_0000209 Ga0495643_0000209_16634_17641 328
101 3300046524 Ga0495648_0000017 Ga0495648_0000017_25632_26639 328
102 3300046524 Ga0495648_0000017 Ga0495648_0000017_256462_257469 328
103 3300046528 Ga0495642_0000854 Ga0495642_0000854_11424_12431 328
104 3300046538 Ga0495609_0000235 Ga0495609_0000235_30593_31618 328
105 3300046542 Ga0495597_0000017 Ga0495597_0000017_147798_148805 328
106 3300046557 Ga0495622_0000058 Ga0495622_0000058_71211_72218 328
107 3300046558 Ga0495633_0000394 Ga0495633_0000394_25273_26280 328
108 3300046660 Ga0495625_0000556 Ga0495625_0000556_32790_33797 328
109 3300047323 Ga0495683_0026873 Ga0495683_0026873_224_1258 328
110 3300047443 Ga0495687_004641 Ga0495687_004641_3478_4488 328
111 3300003322 rootL2_10086965 rootL2_100869652 329
112 3300046457 Ga0495590_0018967 Ga0495590_0018967_96_1220 329
113 3300046460 Ga0495638_0000861 Ga0495638_0000861_18806_19930 329
114 3300046474 Ga0495605_0000121 Ga0495605_0000121_58174_59298 329
115 3300046501 Ga0495607_0021218 Ga0495607_0021218_1454_2578 329
116 3300046506 Ga0495583_0000150 Ga0495583_0000150_56382_57506 329
117 3300046523 Ga0495644_0001201 Ga0495644_0001201_7767_8891 329
118 3300046524 Ga0495648_0002048 Ga0495648_0002048_10123_11247 329
119 3300046538 Ga0495609_0002059 Ga0495609_0002059_3037_4161 329
120 3300046648 Ga0495611_0001753 Ga0495611_0001753_881_2005 329
121 3300046660 Ga0495625_0023696 Ga0495625_0023696_3209_4333 329
122 3300046691 Ga0495670_0002547 Ga0495670_0002547_6151_7275 329
123 3300046692 Ga0495671_0028528 Ga0495671_0028528_1622_2746 329
124 3300047318 Ga0495636_0000553 Ga0495636_0000553_6232_7356 329
125 3300047320 Ga0495672_0021168 Ga0495672_0021168_2244_3368 329
126 3300047323 Ga0495683_0000790 Ga0495683_0000790_19315_20439 329
127 3300047443 Ga0495687_000057 Ga0495687_000057_124834_125958 329
128 3300047445 Ga0495677_0014500 Ga0495677_0014500_284_1408 329
129 3300047447 Ga0495685_000607 Ga0495685_000607_7115_8239 329
130 3300047469 Ga0495673_0009767 Ga0495673_0009767_1369_2493 329
131 3300049459 Ga0495678_005056 Ga0495678_005056_6136_7260 329
132 3300049460 Ga0495682_0001611 Ga0495682_0001611_2095_3219 329
133 3300046507 Ga0495606_0000080 Ga0495606_0000080_43009_44058 330
134 3300046522 Ga0495643_0000142 Ga0495643_0000142_37315_38346 330
135 3300046542 Ga0495597_0000257 Ga0495597_0000257_28064_29074 330
136 3300046660 Ga0495625_0010587 Ga0495625_0010587_6472_7485 330
137 3300046694 Ga0495649_0006345 Ga0495649_0006345_6104_7135 330
138 3300047320 Ga0495672_0000245 Ga0495672_0000245_34709_35740 330
139 3300047469 Ga0495673_0000080 Ga0495673_0000080_148862_149872 330
140 3300049459 Ga0495678_000200 Ga0495678_000200_32315_33346 330
141 iso_pu_bacteria 2857553236 2857557787 330
142 3300046457 Ga0495590_0000021 Ga0495590_0000021_26003_27007 331
143 3300046616 Ga0495668_0000143 Ga0495668_0000143_25839_26843 331
144 3300046810 Ga0495660_0001587 Ga0495660_0001587_12213_13217 331
145 3300049679 Ga0501249_034579 Ga0501249_034579_70_1119 331
146 3300049766 Ga0501269_000043 Ga0501269_000043_30084_31133 331
147 3300046512 Ga0495610_0012123 Ga0495610_0012123_1764_2831 332
148 3300048927 Ga0496124_0041355 Ga0496124_0041355_1544_2602 332
149 3300046810 Ga0495660_0000538 Ga0495660_0000538_13067_14113 333
150 iso_pu_bacteria 2904424332 2904428593 333
151 3300009036 Ga0105244_10000981 Ga0105244_1000098111 334
152 3300046452 Ga0495617_000346 Ga0495617_000346_1172_2389 334
153 3300046492 Ga0495585_0010578 Ga0495585_0010578_1133_2299 334
154 3300046501 Ga0495607_0034469 Ga0495607_0034469_1869_3035 334
155 3300046501 Ga0495607_0039859 Ga0495607_0039859_1501_2664 334
156 3300046501 Ga0495607_0060696 Ga0495607_0060696_168_1331 334
157 3300046512 Ga0495610_0047500 Ga0495610_0047500_449_1474 334
158 3300046512 Ga0495610_0066113 Ga0495610_0066113_180_1346 334
159 3300046523 Ga0495644_0000652 Ga0495644_0000652_803_1966 334
160 3300046558 Ga0495633_0003976 Ga0495633_0003976_4824_6041 334
161 3300046558 Ga0495633_0008585 Ga0495633_0008585_1102_2268 334
162 3300046615 Ga0495656_0014026 Ga0495656_0014026_845_2008 334
163 3300046648 Ga0495611_0047183 Ga0495611_0047183_631_1794 334
164 3300046664 Ga0495659_0010348 Ga0495659_0010348_165_1328 334
165 3300046691 Ga0495670_0058514 Ga0495670_0058514_733_1899 334
166 3300047320 Ga0495672_0002728 Ga0495672_0002728_13857_15020 334
167 3300049460 Ga0495682_0000089 Ga0495682_0000089_52388_53605 334
168 3300049460 Ga0495682_0030878 Ga0495682_0030878_171_1334 334
169 3300046491 Ga0495584_0000161 Ga0495584_0000161_9191_10360 335
170 3300002738 JGI25154J39366_1001576 JGI25154J39366_10015763 336
171 3300003771 Ga0055526_1000079 Ga0055526_100007939 336
172 3300025246 Ga0209646_1000190 Ga0209646_100019022 336
173 3300025295 Ga0209564_1000047 Ga0209564_1000047283 336

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nnw-assembly2.cif.gz_B nlppya in complex with glucosamine 0.6865 287 334
7qd0-assembly1.cif.gz_A-2 structure of the orange carotenoid protein from planktothrix agardhii binding echinenone in the c2 space group 0.6818 285 333
7qd2-assembly1.cif.gz_C structure of the orange carotenoid protein from planktothrix agardhii binding canthaxanthin in the p21 space group 0.6781 285 333
5ui2-assembly1.cif.gz_B crystal structure of orange carotenoid protein 0.6779 285 333
7qcz-assembly1.cif.gz_A-2 structure of the orange carotenoid protein from planktothrix agardhii binding canthaxanthin in the c2 space group 0.6777 287 333
ID Description Score Start End Superfamily
af_O01913_702_992_3.90.190.10 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.7505 283 332 3.90.190.10
af_O94410_61_164_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7188 284 332 3.40.50.2020
af_K7M4U2_1_78_1.20.5.2050 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.6922 284 322 1.20.5.2050
af_P22434_89_366_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.6779 282 321 3.60.15.10
af_Q19520_440_765_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6663 284 325 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A430HHP5-F1-model_v4 Uncharacterized protein 0.9256 25 260
AF-A0A7G5ZJR6-F1-model_v4 Uncharacterized protein 0.9217 31 270
AF-A0A4Y7B959-F1-model_v4 deleted 0.9113 24 261
AF-A0A4Q3ITQ5-F1-model_v4 deleted 0.9072 19 206
AF-A0A1E7WLW9-F1-model_v4 Uncharacterized protein 0.9038 15 336

Feature Viewer

pLDDT pTM Quality
80.16 0.79 High
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Predicted Structure (AlphaFold2)

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