F263302

General Info

Members Datasets Scaffolds Average Seq Length
173 140 346 251

Family's Representative Sequence

Representative Sequence 3300048905|Ga0496102_0354061|Ga0496102_0354061_477_1280
Length 267
Sequence VNEQVSDLASGAPSLRATALSVDLGGNRIIDDASLELAAGKLTVLVGPNGAGKTTLMRALAGLLPAKGRIELEGRALSTFSARERARRIAYLPQGHVFHWPMSVAAVVALGRQPYADVFAPLAPADRTAVGRALALTAVEPWATRPVTTLSGGERARVALARALATQAPILLADEPTMSLDPRHQLVVMELLARAAHEGGAVLAIVHDLALATRYADRVLMMERGRLVAEGTAREVLTPERIAAVFAVEAAITESAVGPIPVLRKPL

Samples

Sample ID Description Type Environment
1 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
82 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
85 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
88 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
89 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
90 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
91 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
92 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
93 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
94 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
95 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
96 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
97 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
98 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
99 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
113 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
114 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
120 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
121 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
122 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
123 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
124 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
134 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
135 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
136 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
137 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
140 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.42
Metatranscriptomes 0
Isolates 0.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.25
Nodule 0
Rhizoplane 6.94
Rhizosphere 83.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496102_0354061 3300048905 Bacteria 1382
2 Ga0070690_100247356 3300005330 Bacteria 1260
3 Ga0070670_100191486 3300005331 Bacteria 1776
4 Ga0070670_100646251 3300005331 Bacteria 949
5 Ga0070677_10001666 3300005333 Bacteria 7020
6 Ga0070666_10224061 3300005335 Bacteria 1327
7 Ga0070669_100143529 3300005353 Bacteria 1843
8 Ga0070675_100107277 3300005354 Bacteria 2358
9 Ga0070671_100519908 3300005355 Bacteria 1025
10 Ga0070674_100000293 3300005356 Bacteria 24580
11 Ga0070673_100062927 3300005364 Bacteria 2950
12 Ga0070688_100181147 3300005365 Bacteria 1461
13 Ga0070667_100053394 3300005367 Bacteria 3410
14 Ga0070667_100396325 3300005367 Bacteria 1256
15 Ga0070667_100788069 3300005367 Bacteria 882
16 Ga0070678_100050452 3300005456 Bacteria 3010
17 Ga0070678_100208762 3300005456 Bacteria 1617
18 Ga0070662_100031824 3300005457 Bacteria 3705
19 Ga0068867_100176897 3300005459 Bacteria 1694
20 Ga0070685_10127859 3300005466 Bacteria 1585
21 Ga0070679_100037783 3300005530 Bacteria 4798
22 Ga0070693_100051587 3300005547 Bacteria 2356
23 Ga0070665_100159187 3300005548 Bacteria 2260
24 Ga0070664_100072820 3300005564 Bacteria 2947
25 Ga0068854_100154677 3300005578 Bacteria 1771
26 Ga0068852_100348997 3300005616 Bacteria 1444
27 Ga0068859_100961174 3300005617 Bacteria 937
28 Ga0068864_100272850 3300005618 Bacteria 1576
29 Ga0081455_10406880 3300005937 Bacteria 942
30 Ga0081538_10002795 3300005981 Bacteria 16716
31 Ga0081540_1004614 3300005983 Bacteria 10424
32 Ga0075365_10026054 3300006038 Bacteria 3707
33 Ga0075365_10498952 3300006038 Bacteria 860
34 Ga0075363_100013014 3300006048 Bacteria 4020
35 Ga0075362_10023588 3300006177 Bacteria 2604
36 Ga0075362_10145356 3300006177 Bacteria 1135
37 Ga0075367_10001554 3300006178 Bacteria 9925
38 Ga0075369_10022273 3300006186 Bacteria 2612
39 Ga0097621_100052705 3300006237 Bacteria 3315
40 Ga0068871_100194788 3300006358 Bacteria 1747
41 Ga0075428_100206546 3300006844 Bacteria 2123
42 Ga0075428_100218572 3300006844 Bacteria 2058
43 Ga0075430_100000015 3300006846 Bacteria 89952
44 Ga0075431_100068569 3300006847 Bacteria 3660
45 Ga0075433_10041187 3300006852 Bacteria 4001
46 Ga0075433_10166216 3300006852 Bacteria 1963
47 Ga0075434_100040438 3300006871 Bacteria 4616
48 Ga0075434_100925951 3300006871 Bacteria 886
49 Ga0075429_100037299 3300006880 Bacteria 4231
50 Ga0068865_100236295 3300006881 Bacteria 1436
51 Ga0068865_100272298 3300006881 Bacteria 1345
52 Ga0075436_100049250 3300006914 Bacteria 2907
53 Ga0097620_100961345 3300006931 Bacteria 937
54 Ga0075435_100090576 3300007076 Bacteria 2523
55 Ga0111539_10028851 3300009094 Bacteria 6767
56 Ga0105245_10001287 3300009098 Bacteria 22612
57 Ga0114129_10027223 3300009147 Bacteria 8094
58 Ga0114129_10093152 3300009147 Bacteria 4174
59 Ga0105243_10342733 3300009148 Bacteria 1369
60 Ga0105241_10549705 3300009174 Bacteria 1036
61 Ga0105242_10719494 3300009176 Bacteria 979
62 Ga0105248_10019947 3300009177 Bacteria 7422
63 Ga0099796_10001372 3300010159 Bacteria 4859
64 Ga0105246_10023460 3300011119 Bacteria 3992
65 Ga0157380_10267374 3300014326 Bacteria 1557
66 Ga0157379_10439429 3300014968 Bacteria 1203
67 Ga0157376_10165409 3300014969 Bacteria 2009
68 Ga0209758_1041096 3300025297 Bacteria 1734
69 Ga0207682_10000400 3300025893 Bacteria 19971
70 Ga0207688_10200517 3300025901 Bacteria 1196
71 Ga0207643_10155402 3300025908 Bacteria 1374
72 Ga0207687_10021328 3300025927 Bacteria 4303
73 Ga0207687_10053812 3300025927 Bacteria 2814
74 Ga0207644_10463395 3300025931 Bacteria 1042
75 Ga0207706_10026642 3300025933 Bacteria 5174
76 Ga0207670_10080558 3300025936 Bacteria 2276
77 Ga0207669_10004587 3300025937 Bacteria 6097
78 Ga0207704_10070908 3300025938 Bacteria 2209
79 Ga0207691_10002457 3300025940 Bacteria 18124
80 Ga0207711_10044708 3300025941 Bacteria 3782
81 Ga0207679_10062056 3300025945 Bacteria 2784
82 Ga0207648_10064417 3300026089 Bacteria 3195
83 Ga0207676_10407894 3300026095 Bacteria 1271
84 Ga0207675_100136186 3300026118 Bacteria 2330
85 Ga0207683_10000561 3300026121 Bacteria 34352
86 Ga0207698_10206098 3300026142 Bacteria 1765
87 Ga0207428_10292629 3300027907 Bacteria 1206
88 Ga0268266_10422924 3300028379 Bacteria 1263
89 Ga0268265_10232301 3300028380 Bacteria 1622
90 Ga0265325_10033514 3300031241 Bacteria 2738
91 Ga0265340_10003145 3300031247 Bacteria 9360
92 Ga0265340_10057902 3300031247 Bacteria 1861
93 Ga0265339_10151307 3300031249 Bacteria 1173
94 Ga0265316_10227891 3300031344 Bacteria 1373
95 Ga0265313_10055578 3300031595 Bacteria 1875
96 Ga0307406_10243771 3300031901 Bacteria 1350
97 Ga0373927_0075508 3300035695 Bacteria 2182
98 Ga0373947_0241809 3300035725 Bacteria 1191
99 Ga0373925_0154924 3300037068 Bacteria 1801
100 Ga0495605_0034321 3300046474 Bacteria 2569
101 Ga0495639_0100379 3300046475 Bacteria 1366
102 Ga0495584_0169368 3300046491 Bacteria 1110
103 Ga0495598_0003203 3300046537 Bacteria 3454
104 Ga0495609_0114901 3300046538 Bacteria 1160
105 Ga0495621_0052434 3300046539 Bacteria 1462
106 Ga0495656_0124627 3300046615 Bacteria 1220
107 Ga0495647_0055433 3300046681 Bacteria 1552
108 Ga0495658_0037887 3300046683 Bacteria 2667
109 Ga0495581_0066324 3300047315 Bacteria 2087
110 Ga0495685_053296 3300047447 Bacteria 1369
111 Ga0495615_0040374 3300048090 Bacteria 1161
112 Ga0496100_0032470 3300048903 Bacteria 3257
113 Ga0496101_0295895 3300048904 Bacteria 1267
114 Ga0496104_0000709 3300048907 Bacteria 28655
115 Ga0496104_0012168 3300048907 Bacteria 7729
116 Ga0496105_0006461 3300048908 Bacteria 9012
117 Ga0496108_0541792 3300048911 Bacteria 1016
118 Ga0496109_0062153 3300048912 Bacteria 3415
119 Ga0496109_0265586 3300048912 Bacteria 1617
120 Ga0496114_0333368 3300048917 Bacteria 1341
121 Ga0496115_0097208 3300048918 Bacteria 2411
122 Ga0496115_0161487 3300048918 Bacteria 1852
123 Ga0501034_0043211 3300049571 Bacteria 4562
124 Ga0501034_0060814 3300049571 Bacteria 3794
125 Ga0501034_0294776 3300049571 Bacteria 1559
126 Ga0501038_0352643 3300049574 Bacteria 1146
127 Ga0501046_0298550 3300049580 Bacteria 1177
128 Ga0501047_0222086 3300049581 Bacteria 1745
129 Ga0501048_0449086 3300049582 Bacteria 923
130 Ga0501067_0039022 3300049583 Bacteria 2636
131 Ga0501069_0064013 3300049585 Bacteria 2055
132 Ga0501070_0286170 3300049586 Bacteria 1344
133 Ga0501071_0352643 3300049587 Bacteria 1120
134 Ga0501073_0001708 3300049589 Bacteria 16287
135 Ga0501073_0009921 3300049589 Bacteria 7006
136 Ga0501073_0026109 3300049589 Bacteria 4185
137 Ga0501073_0066468 3300049589 Bacteria 2513
138 Ga0501073_0121524 3300049589 Bacteria 1810
139 Ga0501074_0204166 3300049590 Bacteria 1408
140 Ga0501077_0097089 3300049593 Bacteria 1867
141 Ga0501077_0164507 3300049593 Bacteria 1409
142 Ga0501080_0058406 3300049742 Bacteria 3591
143 Ga0501083_0004442 3300049744 Bacteria 9905
144 Ga0501083_0009838 3300049744 Bacteria 6748
145 Ga0501083_0029126 3300049744 Bacteria 3801
146 Ga0501083_0199717 3300049744 Bacteria 1304
147 Ga0501083_0284077 3300049744 Bacteria 1076
148 nmdc:mga03683_42506_c1 3300050489 Bacteria 1870
149 nmdc:mga03n38_2220_c1 3300050490 Bacteria 5930
150 nmdc:mga00v17_279631_c1 3300050491 Bacteria 1083
151 nmdc:mga0yw44_77913_c1 3300050492 Bacteria 2072
152 nmdc:mga09592_571438_c1 3300050508 Bacteria 970
153 nmdc:mga0qj67_114044_c1 3300050509 Bacteria 2183
154 nmdc:mga0qj67_168_c1 3300050509 Bacteria 43793
155 nmdc:mga06r32_133934_c1 3300050510 Bacteria 2452
156 nmdc:mga06r32_45760_c1 3300050510 Bacteria 4173
157 nmdc:mga08y16_116521_c1 3300050511 Bacteria 2781
158 nmdc:mga0n895_81280_c1 3300050512 Bacteria 3229
159 nmdc:mga0n895_87260_c1 3300050512 Bacteria 3117
160 nmdc:mga0rr50_4923_c1 3300050513 Bacteria 7904
161 nmdc:mga08x19_9391_c1 3300050514 Bacteria 5855
162 nmdc:mga0a205_176605_c1 3300050515 Bacteria 2031
163 nmdc:mga0a205_288187_c1 3300050515 Bacteria 1517
164 nmdc:mga0sz30_31968_c1 3300050516 Bacteria 2180
165 Ga0495619_0028217 3300053085 Bacteria 3620
166 Ga0500641_0011734 3300053096 Bacteria 3186
167 Ga0500616_0153313 3300053153 Bacteria 1064
168 Ga0500645_042102 3300053730 Bacteria 1348
169 Ga0501084_0038063 3300054114 Bacteria 4020
170 Ga0501084_0084487 3300054114 Bacteria 2664
171 Ga0501084_0156521 3300054114 Bacteria 1922
172 Ga0501082_0000365 3300060353 Bacteria 39948
173 2939670583 2939669807 Bacteria 5028511
174 Ga0496102_0354061
175 Ga0070690_100247356
176 Ga0070670_100191486
177 Ga0070670_100646251
178 Ga0070677_10001666
179 Ga0070666_10224061
180 Ga0070669_100143529
181 Ga0070675_100107277
182 Ga0070671_100519908
183 Ga0070674_100000293
184 Ga0070673_100062927
185 Ga0070688_100181147
186 Ga0070667_100053394
187 Ga0070667_100396325
188 Ga0070667_100788069
189 Ga0070678_100050452
190 Ga0070678_100208762
191 Ga0070662_100031824
192 Ga0068867_100176897
193 Ga0070685_10127859
194 Ga0070679_100037783
195 Ga0070693_100051587
196 Ga0070665_100159187
197 Ga0070664_100072820
198 Ga0068854_100154677
199 Ga0068852_100348997
200 Ga0068859_100961174
201 Ga0068864_100272850
202 Ga0081455_10406880
203 Ga0081538_10002795
204 Ga0081540_1004614
205 Ga0075365_10026054
206 Ga0075365_10498952
207 Ga0075363_100013014
208 Ga0075362_10023588
209 Ga0075362_10145356
210 Ga0075367_10001554
211 Ga0075369_10022273
212 Ga0097621_100052705
213 Ga0068871_100194788
214 Ga0075428_100206546
215 Ga0075428_100218572
216 Ga0075430_100000015
217 Ga0075431_100068569
218 Ga0075433_10041187
219 Ga0075433_10166216
220 Ga0075434_100040438
221 Ga0075434_100925951
222 Ga0075429_100037299
223 Ga0068865_100236295
224 Ga0068865_100272298
225 Ga0075436_100049250
226 Ga0097620_100961345
227 Ga0075435_100090576
228 Ga0111539_10028851
229 Ga0105245_10001287
230 Ga0114129_10027223
231 Ga0114129_10093152
232 Ga0105243_10342733
233 Ga0105241_10549705
234 Ga0105242_10719494
235 Ga0105248_10019947
236 Ga0099796_10001372
237 Ga0105246_10023460
238 Ga0157380_10267374
239 Ga0157379_10439429
240 Ga0157376_10165409
241 Ga0209758_1041096
242 Ga0207682_10000400
243 Ga0207688_10200517
244 Ga0207643_10155402
245 Ga0207687_10021328
246 Ga0207687_10053812
247 Ga0207644_10463395
248 Ga0207706_10026642
249 Ga0207670_10080558
250 Ga0207669_10004587
251 Ga0207704_10070908
252 Ga0207691_10002457
253 Ga0207711_10044708
254 Ga0207679_10062056
255 Ga0207648_10064417
256 Ga0207676_10407894
257 Ga0207675_100136186
258 Ga0207683_10000561
259 Ga0207698_10206098
260 Ga0207428_10292629
261 Ga0268266_10422924
262 Ga0268265_10232301
263 Ga0265325_10033514
264 Ga0265340_10003145
265 Ga0265340_10057902
266 Ga0265339_10151307
267 Ga0265316_10227891
268 Ga0265313_10055578
269 Ga0307406_10243771
270 Ga0373927_0075508
271 Ga0373947_0241809
272 Ga0373925_0154924
273 Ga0495605_0034321
274 Ga0495639_0100379
275 Ga0495584_0169368
276 Ga0495598_0003203
277 Ga0495609_0114901
278 Ga0495621_0052434
279 Ga0495656_0124627
280 Ga0495647_0055433
281 Ga0495658_0037887
282 Ga0495581_0066324
283 Ga0495685_053296
284 Ga0495615_0040374
285 Ga0496100_0032470
286 Ga0496101_0295895
287 Ga0496104_0000709
288 Ga0496104_0012168
289 Ga0496105_0006461
290 Ga0496108_0541792
291 Ga0496109_0062153
292 Ga0496109_0265586
293 Ga0496114_0333368
294 Ga0496115_0097208
295 Ga0496115_0161487
296 Ga0501034_0043211
297 Ga0501034_0060814
298 Ga0501034_0294776
299 Ga0501038_0352643
300 Ga0501046_0298550
301 Ga0501047_0222086
302 Ga0501048_0449086
303 Ga0501067_0039022
304 Ga0501069_0064013
305 Ga0501070_0286170
306 Ga0501071_0352643
307 Ga0501073_0001708
308 Ga0501073_0009921
309 Ga0501073_0026109
310 Ga0501073_0066468
311 Ga0501073_0121524
312 Ga0501074_0204166
313 Ga0501077_0097089
314 Ga0501077_0164507
315 Ga0501080_0058406
316 Ga0501083_0004442
317 Ga0501083_0009838
318 Ga0501083_0029126
319 Ga0501083_0199717
320 Ga0501083_0284077
321 nmdc:mga03683_42506_c1
322 nmdc:mga03n38_2220_c1
323 nmdc:mga00v17_279631_c1
324 nmdc:mga0yw44_77913_c1
325 nmdc:mga09592_571438_c1
326 nmdc:mga0qj67_114044_c1
327 nmdc:mga0qj67_168_c1
328 nmdc:mga06r32_133934_c1
329 nmdc:mga06r32_45760_c1
330 nmdc:mga08y16_116521_c1
331 nmdc:mga0n895_81280_c1
332 nmdc:mga0n895_87260_c1
333 nmdc:mga0rr50_4923_c1
334 nmdc:mga08x19_9391_c1
335 nmdc:mga0a205_176605_c1
336 nmdc:mga0a205_288187_c1
337 nmdc:mga0sz30_31968_c1
338 Ga0495619_0028217
339 Ga0500641_0011734
340 Ga0500616_0153313
341 Ga0500645_042102
342 Ga0501084_0038063
343 Ga0501084_0084487
344 Ga0501084_0156521
345 Ga0501082_0000365
346 2939670583

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

30

178

0.93

PF13476

AAA_23

AAA domain

21

78

0.85

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

42

91

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5b58-assembly1.cif.gz_C inward-facing conformation of abc heme importer bhuuv in complex with periplasmic heme binding protein bhut from burkholderia cenocepacia 0.7114 4 233
4g1u-assembly1.cif.gz_D x-ray structure of the bacterial heme transporter hmuuv from yersinia pestis 0.6962 4 236
5b58-assembly1.cif.gz_D inward-facing conformation of abc heme importer bhuuv in complex with periplasmic heme binding protein bhut from burkholderia cenocepacia 0.6935 4 235
5b58-assembly1.cif.gz_C inward-facing conformation of abc heme importer bhuuv in complex with periplasmic heme binding protein bhut from burkholderia cenocepacia 0.6916 4 233
4dbl-assembly1.cif.gz_C crystal structure of e159q mutant of btucdf 0.6898 1 232
ID Description Score Start End Superfamily
af_A0A1D6P1I8_181_285_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8247 4 87 3.40.50.300
2awoD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7852 1 200 3.40.50.300
2awoD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7801 1 200 3.40.50.300
af_P15031_2_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7174 4 231 3.40.50.300
af_Q2G072_1_252_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7161 4 234 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3B9ITV1-F1-model_v4 ABC transporter 0.894 144 236 GO:0005524
GO:0016887
AF-A0A4Q5T101-F1-model_v4 ABC transporter ATP-binding protein 0.8129 138 236 GO:0005524
GO:0016887
AF-A0A442M983-F1-model_v4 ABC transporter ATP-binding protein 0.7704 1 235 GO:0005524
GO:0016887
AF-A0A078L802-F1-model_v4 Ferric enterobactin transport ATP-binding protein 0.7647 2 234 GO:0005524
GO:0016887
AF-A0A1W6ZNZ4-F1-model_v4 ABC transporter 0.7494 1 236 GO:0005524
GO:0016887

Map